Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:27:18 (1586228): wrapper (7.7.26015): starting
12:27:18 (1586228): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 12:27:18] Arguments: --nthreads 8
[2026-01-08 12:27:18] Threads: 8
[2026-01-08 12:27:18] Checking for CVMFS
[2026-01-08 12:27:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 12:27:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 12:27:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 12:27:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 12:27:21] 2.13.3.0 9702 92271 332928 154915 3 249 32149155 32935936 18301 16776704 0 428720314 99.694 324979023 32470 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 12:27:21] CVMFS is ok
[2026-01-08 12:27:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 12:27:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 12:27:21] Further information can be found at the LHC@home message board.
[2026-01-08 12:27:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 12:27:21] Checking for apptainer binary...
[2026-01-08 12:27:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 12:27:21] Running /usr/bin/apptainer --version
[2026-01-08 12:27:22] apptainer version 1.4.5-2.el9
[2026-01-08 12:27:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 12:27:22] c-4-37.aglt2.org
[2026-01-08 12:27:22] apptainer works
[2026-01-08 12:27:22] Set ATHENA_PROC_NUMBER=8
[2026-01-08 12:27:22] Set ATHENA_CORE_NUMBER=8
[2026-01-08 12:27:22] Starting ATLAS job with PandaID=6962917565
[2026-01-08 12:27:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 21:59:06]  *** The last 200 lines of the pilot log: ***
[2026-01-08 21:59:07] 2026-01-09 02:58:21,846 | INFO     | time since job start (34184s) is within the limit (174528.0s)
[2026-01-08 21:59:07] 2026-01-09 02:58:22,452 | INFO     | monitor loop #1791: job 0:6962917565 is in state 'finished'
[2026-01-08 21:59:07] 2026-01-09 02:58:22,452 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 21:59:07] 2026-01-09 02:58:23,853 | INFO     | time since job start (34186s) is within the limit (174528.0s)
[2026-01-08 21:59:07] 2026-01-09 02:58:24,976 | INFO     | monitor loop #1792: job 0:6962917565 is in state 'finished'
[2026-01-08 21:59:07] 2026-01-09 02:58:24,976 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 21:59:07] 2026-01-09 02:58:25,496 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 21:59:07] 2026-01-09 02:58:25,567 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8460250000003
[2026-01-08 21:59:07] 2026-01-09 02:58:25,618 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6962917565/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 21:59:07] 2026-01-09 02:58:25,619 | INFO     | extracted standard info from prmon json
[2026-01-08 21:59:07] 2026-01-09 02:58:25,619 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 21:59:07] 2026-01-09 02:58:25,619 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 21:59:07] 2026-01-09 02:58:25,637 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 21:59:07] 2026-01-09 02:58:25,638 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 21:59:07] 2026-01-09 02:58:25,738 | INFO     | fitting pss+swap vs Time
[2026-01-08 21:59:07] 2026-01-09 02:58:25,767 | INFO     | sum of square deviations: 53584017231.23522
[2026-01-08 21:59:07] 2026-01-09 02:58:25,877 | INFO     | time since job start (34188s) is within the limit (174528.0s)
[2026-01-08 21:59:07] 2026-01-09 02:58:25,886 | INFO     | sum of deviations: 26645223669.224392
[2026-01-08 21:59:07] 2026-01-09 02:58:25,886 | INFO     | mean x: 1767910438.4398563
[2026-01-08 21:59:07] 2026-01-09 02:58:25,886 | INFO     | mean y: 2546650.305206463
[2026-01-08 21:59:07] 2026-01-09 02:58:25,886 | INFO     | intersect: -876565657.6821698
[2026-01-08 21:59:07] 2026-01-09 02:58:25,887 | INFO     | chi2: 2.427049793276105
[2026-01-08 21:59:07] 2026-01-09 02:58:25,888 | INFO     | sum of square deviations: 52153963055.25929
[2026-01-08 21:59:07] 2026-01-09 02:58:26,000 | INFO     | sum of deviations: 25257541070.322433
[2026-01-08 21:59:07] 2026-01-09 02:58:26,052 | INFO     | mean x: 1767910285.9438405
[2026-01-08 21:59:07] 2026-01-09 02:58:26,052 | INFO     | mean y: 2546503.3007246377
[2026-01-08 21:59:07] 2026-01-09 02:58:26,052 | INFO     | intersect: -853631321.7393447
[2026-01-08 21:59:07] 2026-01-09 02:58:26,053 | INFO     | chi2: 2.4260324015484405
[2026-01-08 21:59:07] 2026-01-09 02:58:26,053 | INFO     | current chi2=2.4260324015484405 (change=0.04191886505514449 %)
[2026-01-08 21:59:07] 2026-01-09 02:58:26,053 | INFO     | right removable region: 551
[2026-01-08 21:59:07] 2026-01-09 02:58:26,054 | INFO     | sum of square deviations: 52153677327.67946
[2026-01-08 21:59:07] 2026-01-09 02:58:26,144 | INFO     | sum of deviations: -87943399280.05441
[2026-01-08 21:59:07] 2026-01-09 02:58:26,144 | INFO     | mean x: 1767910590.951087
[2026-01-08 21:59:07] 2026-01-09 02:58:26,145 | INFO     | mean y: 2558834.257246377
[2026-01-08 21:59:07] 2026-01-09 02:58:26,145 | INFO     | intersect: 2983673013.69657
[2026-01-08 21:59:07] 2026-01-09 02:58:26,187 | INFO     | chi2: 0.5256408315430288
[2026-01-08 21:59:07] 2026-01-09 02:58:26,187 | INFO     | current chi2=0.5256408315430288 (change=78.34239606458576 %)
[2026-01-08 21:59:07] 2026-01-09 02:58:26,188 | INFO     | sum of square deviations: 50749046119.904915
[2026-01-08 21:59:07] 2026-01-09 02:58:26,246 | INFO     | sum of deviations: -103114457468.0586
[2026-01-08 21:59:07] 2026-01-09 02:58:26,301 | INFO     | mean x: 1767910743.4606948
[2026-01-08 21:59:07] 2026-01-09 02:58:26,301 | INFO     | mean y: 2560474.2065813527
[2026-01-08 21:59:07] 2026-01-09 02:58:26,301 | INFO     | intersect: 3594690200.806519
[2026-01-08 21:59:07] 2026-01-09 02:58:26,302 | INFO     | chi2: 0.47121638122045634
[2026-01-08 21:59:07] 2026-01-09 02:58:26,302 | INFO     | current chi2=0.47121638122045634 (change=10.35392364075074 %)
[2026-01-08 21:59:07] 2026-01-09 02:58:26,303 | INFO     | left removable region: 20
[2026-01-08 21:59:07] 2026-01-09 02:58:26,303 | INFO     | sum of square deviations: 46424521854.45535
[2026-01-08 21:59:07] 2026-01-09 02:58:26,394 | INFO     | sum of deviations: -82496006549.94722
[2026-01-08 21:59:07] 2026-01-09 02:58:26,395 | INFO     | mean x: 1767910865.4764595
[2026-01-08 21:59:07] 2026-01-09 02:58:26,395 | INFO     | mean y: 2558098.964218456
[2026-01-08 21:59:07] 2026-01-09 02:58:26,395 | INFO     | intersect: 3144121663.050169
[2026-01-08 21:59:07] 2026-01-09 02:58:26,412 | INFO     | chi2: 0.43065003937792407
[2026-01-08 21:59:07] 2026-01-09 02:58:26,412 | INFO     | current memory leak: -1.78 B/s (using 531 data points, chi2=0.43)
[2026-01-08 21:59:07] 2026-01-09 02:58:26,413 | INFO     | could have reported an average CPU frequency of 2599 MHz (22 samples)
[2026-01-08 21:59:07] 2026-01-09 02:58:26,413 | INFO     | ..............................
[2026-01-08 21:59:07] 2026-01-09 02:58:26,413 | INFO     | . Timing measurements:
[2026-01-08 21:59:07] 2026-01-09 02:58:26,413 | INFO     | . get job = 0 s
[2026-01-08 21:59:07] 2026-01-09 02:58:26,414 | INFO     | . initial setup = 7 s
[2026-01-08 21:59:07] 2026-01-09 02:58:26,414 | INFO     | . payload setup = 42 s
[2026-01-08 21:59:07] 2026-01-09 02:58:26,414 | INFO     | . stage-in = 0 s
[2026-01-08 21:59:07] 2026-01-09 02:58:26,414 | INFO     | . payload execution = 34011 s
[2026-01-08 21:59:07] 2026-01-09 02:58:26,414 | INFO     | . stage-out = 7 s
[2026-01-08 21:59:07] 2026-01-09 02:58:26,414 | INFO     | . log creation = 1 s
[2026-01-08 21:59:07] 2026-01-09 02:58:26,414 | INFO     | ..............................
[2026-01-08 21:59:07] 2026-01-09 02:58:27,830 | INFO     | 
[2026-01-08 21:59:07] 2026-01-09 02:58:27,830 | INFO     | job summary report
[2026-01-08 21:59:07] 2026-01-09 02:58:27,830 | INFO     | --------------------------------------------------
[2026-01-08 21:59:07] 2026-01-09 02:58:27,830 | INFO     | PanDA job id: 6962917565
[2026-01-08 21:59:07] 2026-01-09 02:58:27,831 | INFO     | task id: 47898826
[2026-01-08 21:59:07] 2026-01-09 02:58:27,831 | INFO     | errors: (none)
[2026-01-08 21:59:07] 2026-01-09 02:58:27,831 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 21:59:07] 2026-01-09 02:58:27,831 | INFO     | pilot state: finished 
[2026-01-08 21:59:07] 2026-01-09 02:58:27,831 | INFO     | transexitcode: 0
[2026-01-08 21:59:07] 2026-01-09 02:58:27,831 | INFO     | exeerrorcode: 0
[2026-01-08 21:59:07] 2026-01-09 02:58:27,872 | INFO     | exeerrordiag: 
[2026-01-08 21:59:07] 2026-01-09 02:58:27,872 | INFO     | exitcode: 0
[2026-01-08 21:59:07] 2026-01-09 02:58:27,872 | INFO     | exitmsg: OK
[2026-01-08 21:59:07] 2026-01-09 02:58:27,872 | INFO     | cpuconsumptiontime: 70608 s
[2026-01-08 21:59:07] 2026-01-09 02:58:27,872 | INFO     | nevents: 400
[2026-01-08 21:59:07] 2026-01-09 02:58:27,872 | INFO     | neventsw: 0
[2026-01-08 21:59:07] 2026-01-09 02:58:27,873 | INFO     | pid: 1600756
[2026-01-08 21:59:07] 2026-01-09 02:58:27,873 | INFO     | pgrp: 1600756
[2026-01-08 21:59:07] 2026-01-09 02:58:27,873 | INFO     | corecount: 8
[2026-01-08 21:59:07] 2026-01-09 02:58:27,873 | INFO     | event service: False
[2026-01-08 21:59:07] 2026-01-09 02:58:27,873 | INFO     | sizes: {0: 2283796, 1: 2283995, 2: 2283995, 13: 2284023, 25: 2284079, 37: 2284107, 39: 2284525, 48: 2284553, 34059: 2324008, 34067: 2333006, 34069: 2333062, 34107:
[2026-01-08 21:59:07] 2026-01-09 02:58:27,873 | INFO     | --------------------------------------------------
[2026-01-08 21:59:07] 2026-01-09 02:58:27,873 | INFO     | 
[2026-01-08 21:59:07] 2026-01-09 02:58:27,873 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-08 21:59:07] 2026-01-09 02:58:27,951 | INFO     | time since job start (34190s) is within the limit (174528.0s)
[2026-01-08 21:59:07] 2026-01-09 02:58:28,072 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 21:59:07] 2026-01-09 02:58:28,073 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 21:59:07] 2026-01-09 02:58:28,073 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 21:59:07] 2026-01-09 02:58:28,073 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 21:59:07] 2026-01-09 02:58:28,073 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 21:59:07] 2026-01-09 02:58:28,073 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 21:59:07] 2026-01-09 02:58:28,073 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 21:59:07] 2026-01-09 02:58:28,073 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 21:59:07] 2026-01-09 02:58:28,073 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 21:59:07] 2026-01-09 02:58:28,074 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 21:59:07] 2026-01-09 02:58:28,074 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 21:59:07] 2026-01-09 02:58:28,074 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 21:59:07] 2026-01-09 02:58:28,074 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 21:59:07] 2026-01-09 02:58:28,074 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 21:59:07] 2026-01-09 02:58:28,074 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 21:59:07] 2026-01-09 02:58:28,074 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 21:59:07] 2026-01-09 02:58:28,074 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 21:59:07] 2026-01-09 02:58:28,074 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 21:59:07] 2026-01-09 02:58:28,075 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 21:59:07] 2026-01-09 02:58:28,075 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 21:59:07] 2026-01-09 02:58:28,075 | INFO     | job 6962917565 has completed (purged errors)
[2026-01-08 21:59:07] 2026-01-09 02:58:28,075 | INFO     | overall cleanup function is called
[2026-01-08 21:59:07] 2026-01-09 02:58:29,149 | INFO     | --- collectZombieJob: --- 10, [1600756]
[2026-01-08 21:59:07] 2026-01-09 02:58:29,149 | INFO     | zombie collector waiting for pid 1600756
[2026-01-08 21:59:07] 2026-01-09 02:58:29,149 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 21:59:07] 2026-01-09 02:58:29,149 | INFO     | collected zombie processes
[2026-01-08 21:59:07] 2026-01-09 02:58:29,158 | INFO     | will attempt to kill all subprocesses of pid=1600756
[2026-01-08 21:59:07] 2026-01-09 02:58:32,650 | INFO     | process IDs to be killed: [1600756] (in reverse order)
[2026-01-08 21:59:07] 2026-01-09 02:58:32,774 [wrapper] supervise_pilot (15 min periods counter: 39)
[2026-01-08 21:59:07] 2026-01-09 02:58:32,803 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 21:59:07] 2026-01-09 02:58:32,803 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 21:59:07] 2026-01-09 02:58:32,962 | INFO     | did not find any defunct processes belonging to 1600756
[2026-01-08 21:59:07] 2026-01-09 02:58:33,000 | INFO     | did not find any defunct processes belonging to 1600756
[2026-01-08 21:59:07] 2026-01-09 02:58:33,001 | INFO     | ready for new job
[2026-01-08 21:59:07] 2026-01-09 02:58:33,001 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 21:59:07] 2026-01-09 02:58:33,004 | INFO     | ***************************************
[2026-01-08 21:59:07] 2026-01-09 02:58:33,004 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 21:59:07] 2026-01-09 02:58:33,004 | INFO     | ***************************************
[2026-01-08 21:59:07] 2026-01-09 02:58:33,005 | INFO     | 
[2026-01-08 21:59:07] 2026-01-09 02:58:33,070 | INFO     | architecture information:
[2026-01-08 21:59:07] 2026-01-09 02:58:33,101 | INFO     | executing command: cat /etc/os-release
[2026-01-08 21:59:07] 2026-01-09 02:58:33,185 | INFO     | cat /etc/os-release:
[2026-01-08 21:59:07] NAME="CentOS Linux"
[2026-01-08 21:59:07] VERSION="7 (Core)"
[2026-01-08 21:59:07] ID="centos"
[2026-01-08 21:59:07] ID_LIKE="rhel fedora"
[2026-01-08 21:59:07] VERSION_ID="7"
[2026-01-08 21:59:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 21:59:07] ANSI_COLOR="0;31"
[2026-01-08 21:59:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 21:59:07] HOME_URL="https://www.centos.org/"
[2026-01-08 21:59:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 21:59:07] 
[2026-01-08 21:59:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 21:59:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 21:59:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 21:59:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 21:59:07] 
[2026-01-08 21:59:07] 2026-01-09 02:58:33,185 | INFO     | ***************************************
[2026-01-08 21:59:07] 2026-01-09 02:58:33,699 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-08 21:59:07] 2026-01-09 02:58:33,914 | INFO     | sufficient remaining disk space (75745984512 B)
[2026-01-08 21:59:07] 2026-01-09 02:58:33,915 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 21:59:07] 2026-01-09 02:58:33,915 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 21:59:07] 2026-01-09 02:58:33,915 | INFO     | update_server=False
[2026-01-08 21:59:07] 2026-01-09 02:58:33,915 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 21:59:07] 2026-01-09 02:58:33,918 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 21:59:07] 2026-01-09 02:58:33,934 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:59:07] 2026-01-09 02:58:33,934 | INFO     | aborting loop
[2026-01-08 21:59:07] 2026-01-09 02:58:34,360 | INFO     | all payload control threads have been joined
[2026-01-08 21:59:07] 2026-01-09 02:58:34,390 | INFO     | all data control threads have been joined
[2026-01-08 21:59:07] 2026-01-09 02:58:34,874 | INFO     | all job control threads have been joined
[2026-01-08 21:59:07] 2026-01-09 02:58:34,921 | INFO     | [job] retrieve thread has finished
[2026-01-08 21:59:07] 2026-01-09 02:58:34,950 | INFO     | [job] job monitor thread has finished
[2026-01-08 21:59:07] 2026-01-09 02:58:35,094 | INFO     | [data] copytool_in thread has finished
[2026-01-08 21:59:07] 2026-01-09 02:58:35,108 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 21:59:07] 2026-01-09 02:58:35,265 | INFO     | [job] validate thread has finished
[2026-01-08 21:59:07] 2026-01-09 02:58:35,366 | INFO     | [payload] control thread has finished
[2026-01-08 21:59:07] 2026-01-09 02:58:35,375 | INFO     | [payload] validate_post thread has finished
[2026-01-08 21:59:07] 2026-01-09 02:58:35,397 | INFO     | [data] control thread has finished
[2026-01-08 21:59:07] 2026-01-09 02:58:35,463 | INFO     | [payload] failed_post thread has finished
[2026-01-08 21:59:07] 2026-01-09 02:58:35,880 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 21:59:07] 2026-01-09 02:58:35,880 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 21:59:07] 2026-01-09 02:58:35,881 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 21:59:07] 2026-01-09 02:58:35,888 | INFO     | [job] control thread has finished
[2026-01-08 21:59:07] 2026-01-09 02:58:35,925 | INFO     | [data] copytool_out thread has finished
[2026-01-08 21:59:07] 2026-01-09 02:58:36,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 21:59:07] 2026-01-09 02:58:36,755 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:59:07] 2026-01-09 02:58:37,761 | INFO     | [job] queue monitor thread has finished
[2026-01-08 21:59:07] 2026-01-09 02:58:40,402 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 21:59:07] 2026-01-09 02:58:41,187 | INFO     | [monitor] cgroup control has ended
[2026-01-08 21:59:07] 2026-01-09 02:58:42,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139778782988096)>', '<ExcThread(monitor, started 139777621878528)>']
[2026-01-08 21:59:07] 2026-01-09 02:58:47,957 | INFO     | all workflow threads have been joined
[2026-01-08 21:59:07] 2026-01-09 02:58:47,959 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 21:59:07] 2026-01-09 02:58:47,960 | INFO     | traces error code: 0
[2026-01-08 21:59:07] 2026-01-09 02:58:47,962 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 21:59:07] 2026-01-09 02:59:03,767 | INFO     | PID=1590897 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 21:59:07] 2026-01-09 02:59:03,774 | INFO     | .. there are 34 such processes running
[2026-01-08 21:59:07] 2026-01-09 02:59:03,775 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 21:59:07] 2026-01-09 02:59:03,775 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 21:59:07] 2026-01-09 02:59:03,775 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 21:59:07] 2026-01-09 02:59:03,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 21:59:07] 2026-01-09 02:59:03,775 | INFO     | [monitor] control thread has ended
[2026-01-08 21:59:07] 2026-01-09 02:59:05,802 [wrapper] ==== pilot stdout END ====
[2026-01-08 21:59:07] 2026-01-09 02:59:05,805 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 21:59:07] 2026-01-09 02:59:05,808 [wrapper] pilotpid: 1590897
[2026-01-08 21:59:07] 2026-01-09 02:59:05,811 [wrapper] Pilot exit status: 0
[2026-01-08 21:59:07] 2026-01-09 02:59:05,918 [wrapper] pandaids: 6962917565
[2026-01-08 21:59:07] 2026-01-09 02:59:06,099 [wrapper] cleanup supervisor_pilot 4046187 1590898
[2026-01-08 21:59:07] 2026-01-09 02:59:06,103 [wrapper] Test setup, not cleaning
[2026-01-08 21:59:07] 2026-01-09 02:59:06,107 [wrapper] apfmon messages muted
[2026-01-08 21:59:07] 2026-01-09 02:59:06,111 [wrapper] ==== wrapper stdout END ====
[2026-01-08 21:59:07] 2026-01-09 02:59:06,119 [wrapper] ==== wrapper stderr END ====
[2026-01-08 21:59:07]  *** Error codes and diagnostics ***
[2026-01-08 21:59:07]     "exeErrorCode": 0,
[2026-01-08 21:59:07]     "exeErrorDiag": "",
[2026-01-08 21:59:07]     "pilotErrorCode": 0,
[2026-01-08 21:59:07]     "pilotErrorDiag": "",
[2026-01-08 21:59:07]  *** Listing of results directory ***
[2026-01-08 21:59:07] total 447504
[2026-01-08 21:59:07] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-08 21:59:07] -rwx------. 1 boincer umatlas     36322 Jan  8 03:03 runpilot2-wrapper.sh
[2026-01-08 21:59:07] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:07 queuedata.json
[2026-01-08 21:59:07] -rw-r--r--. 1 boincer umatlas       100 Jan  8 12:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 21:59:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 12:27 run_atlas
[2026-01-08 21:59:07] -rw-r--r--. 1 boincer umatlas       105 Jan  8 12:27 job.xml
[2026-01-08 21:59:07] -rw-r--r--. 2 boincer umatlas 226083730 Jan  8 12:27 EVNT.47898824._000652.pool.root.1
[2026-01-08 21:59:07] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 12:27 start_atlas.sh
[2026-01-08 21:59:07] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 12:27 shared
[2026-01-08 21:59:07] -rw-r--r--. 2 boincer umatlas    592399 Jan  8 12:27 input.tar.gz
[2026-01-08 21:59:07] -rw-r--r--. 1 boincer umatlas         0 Jan  8 12:27 boinc_lockfile
[2026-01-08 21:59:07] -rw-r--r--. 1 boincer umatlas      2518 Jan  8 12:27 pandaJob.out
[2026-01-08 21:59:07] -rw-------. 1 boincer umatlas        57 Jan  8 12:27 setup.sh.local
[2026-01-08 21:59:07] -rw-------. 1 boincer umatlas    989837 Jan  8 12:28 agis_schedconf.cvmfs.json
[2026-01-08 21:59:07] drwx------. 5 boincer umatlas      4096 Jan  8 12:28 pilot3
[2026-01-08 21:59:07] -rw-r--r--. 1 boincer umatlas      6659 Jan  8 21:54 init_data.xml
[2026-01-08 21:59:07] -rw-------. 1 boincer umatlas 219152003 Jan  8 21:56 HITS.47898826._019726.pool.root.1
[2026-01-08 21:59:07] -rw-r--r--. 1 boincer umatlas       531 Jan  8 21:56 boinc_task_state.xml
[2026-01-08 21:59:07] -rw-------. 1 boincer umatlas      1044 Jan  8 21:57 memory_monitor_summary.json
[2026-01-08 21:59:07] -rw-------. 1 boincer umatlas   1516240 Jan  8 21:57 agis_ddmendpoints.agis.ALL.json
[2026-01-08 21:59:07] -rw-------. 1 boincer umatlas    665952 Jan  8 21:57 log.47898826._019726.job.log.tgz.1
[2026-01-08 21:59:07] -rw-------. 1 boincer umatlas      7814 Jan  8 21:58 heartbeat.json
[2026-01-08 21:59:07] -rw-------. 1 boincer umatlas       823 Jan  8 21:59 pilotlog.txt
[2026-01-08 21:59:07] -rw-------. 1 boincer umatlas        95 Jan  8 21:59 pilot_heartbeat.json
[2026-01-08 21:59:07] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 21:59 boinc_mmap_file
[2026-01-08 21:59:07] -rw-r--r--. 1 boincer umatlas        28 Jan  8 21:59 wrapper_checkpoint.txt
[2026-01-08 21:59:07] -rw-------. 1 boincer umatlas   3894480 Jan  8 21:59 log.47898826._019726.job.log.1
[2026-01-08 21:59:07] -rw-------. 1 boincer umatlas       357 Jan  8 21:59 output.list
[2026-01-08 21:59:07] -rw-r--r--. 1 boincer umatlas       620 Jan  8 21:59 runtime_log
[2026-01-08 21:59:07] -rw-------. 1 boincer umatlas   4577280 Jan  8 21:59 result.tar.gz
[2026-01-08 21:59:07] -rw-r--r--. 1 boincer umatlas      9333 Jan  8 21:59 runtime_log.err
[2026-01-08 21:59:07] -rw-------. 1 boincer umatlas       657 Jan  8 21:59 DwXNDm2A0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzcjKDmSz2Scm.diag
[2026-01-08 21:59:07] -rw-r--r--. 1 boincer umatlas      2141 Jan  8 21:59 stderr.txt
[2026-01-08 21:59:07] HITS file was successfully produced:
[2026-01-08 21:59:07] -rw-------. 1 boincer umatlas 219152003 Jan  8 21:56 shared/HITS.pool.root.1
[2026-01-08 21:59:07]  *** Contents of shared directory: ***
[2026-01-08 21:59:07] total 439876
[2026-01-08 21:59:07] -rw-r--r--. 2 boincer umatlas 226083730 Jan  8 12:27 ATLAS.root_0
[2026-01-08 21:59:07] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 12:27 start_atlas.sh
[2026-01-08 21:59:07] -rw-r--r--. 2 boincer umatlas    592399 Jan  8 12:27 input.tar.gz
[2026-01-08 21:59:07] -rw-------. 1 boincer umatlas 219152003 Jan  8 21:56 HITS.pool.root.1
[2026-01-08 21:59:07] -rw-------. 1 boincer umatlas   4577280 Jan  8 21:59 result.tar.gz
21:59:08 (1586228): run_atlas exited; CPU time 71732.994033
21:59:08 (1586228): called boinc_finish(0)

</stderr_txt>
]]>

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