Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:05:21 (3774652): wrapper (7.7.26015): starting
07:05:21 (3774652): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 07:05:21] Arguments: --nthreads 4
[2026-01-11 07:05:21] Threads: 4
[2026-01-11 07:05:21] Checking for CVMFS
[2026-01-11 07:05:21] No cvmfs_config command found, will try listing directly
[2026-01-11 07:05:21] CVMFS is ok
[2026-01-11 07:05:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 07:05:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 07:05:21] Further information can be found at the LHC@home message board.
[2026-01-11 07:05:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 07:05:21] Checking for apptainer binary...
[2026-01-11 07:05:21] which: no apptainer in ((null))
[2026-01-11 07:05:21] apptainer is not installed, using version from CVMFS
[2026-01-11 07:05:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 07:05:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-01-11 07:05:21] apptainer works
[2026-01-11 07:05:21] Set ATHENA_PROC_NUMBER=4
[2026-01-11 07:05:21] Set ATHENA_CORE_NUMBER=4
[2026-01-11 07:05:21] Starting ATLAS job with PandaID=6962918519
[2026-01-11 07:05:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 11:08:42]  *** The last 200 lines of the pilot log: ***
[2026-01-11 11:08:42] 2026-01-11 09:59:15,236 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2630.4104609375017
[2026-01-11 11:08:42] 2026-01-11 09:59:15,265 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6962918519/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 11:08:42] 2026-01-11 09:59:15,266 | INFO     | extracted standard info from prmon json
[2026-01-11 11:08:42] 2026-01-11 09:59:15,266 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 11:08:42] 2026-01-11 09:59:15,267 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 11:08:42] 2026-01-11 09:59:15,267 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 11:08:42] 2026-01-11 09:59:15,267 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 11:08:42] 2026-01-11 09:59:15,271 | INFO     | fitting pss+swap vs Time
[2026-01-11 11:08:42] 2026-01-11 09:59:15,272 | INFO     | sum of square deviations: 3772712597.5
[2026-01-11 11:08:42] 2026-01-11 09:59:15,273 | INFO     | sum of deviations: 19152308347.999996
[2026-01-11 11:08:42] 2026-01-11 09:59:15,274 | INFO     | mean x: 1768118551.5
[2026-01-11 11:08:42] 2026-01-11 09:59:15,274 | INFO     | mean y: 2299907.782608696
[2026-01-11 11:08:42] 2026-01-11 09:59:15,274 | INFO     | intersect: -8973616178.851423
[2026-01-11 11:08:42] 2026-01-11 09:59:15,274 | INFO     | chi2: 2.0770830752193756
[2026-01-11 11:08:42] 2026-01-11 09:59:15,275 | INFO     | sum of square deviations: 3531973200.0
[2026-01-11 11:08:42] 2026-01-11 09:59:15,276 | INFO     | sum of deviations: 32842449043.999996
[2026-01-11 11:08:42] 2026-01-11 09:59:15,276 | INFO     | mean x: 1768118399.0
[2026-01-11 11:08:42] 2026-01-11 09:59:15,276 | INFO     | mean y: 2308420.2933333335
[2026-01-11 11:08:42] 2026-01-11 09:59:15,276 | INFO     | intersect: -16438738873.869701
[2026-01-11 11:08:42] 2026-01-11 09:59:15,277 | INFO     | chi2: 1.2855203276861376
[2026-01-11 11:08:42] 2026-01-11 09:59:15,277 | INFO     | current chi2=1.2855203276861376 (change=38.109344637052395 %)
[2026-01-11 11:08:42] 2026-01-11 09:59:15,277 | INFO     | sum of square deviations: 3301699115.0
[2026-01-11 11:08:42] 2026-01-11 09:59:15,279 | INFO     | sum of deviations: 31981627993.499996
[2026-01-11 11:08:42] 2026-01-11 09:59:15,279 | INFO     | mean x: 1768118246.5
[2026-01-11 11:08:42] 2026-01-11 09:59:15,279 | INFO     | mean y: 2307850.159090909
[2026-01-11 11:08:42] 2026-01-11 09:59:15,279 | INFO     | intersect: -17124419340.450623
[2026-01-11 11:08:42] 2026-01-11 09:59:15,279 | INFO     | chi2: 1.2859420235165608
[2026-01-11 11:08:42] 2026-01-11 09:59:15,280 | INFO     | current chi2=1.2859420235165608 (change=-0.032803513203273384 %)
[2026-01-11 11:08:42] 2026-01-11 09:59:15,280 | INFO     | right removable region: 219
[2026-01-11 11:08:42] 2026-01-11 09:59:15,280 | INFO     | sum of square deviations: 3531973200.0
[2026-01-11 11:08:42] 2026-01-11 09:59:15,282 | INFO     | sum of deviations: -8999422720.0
[2026-01-11 11:08:42] 2026-01-11 09:59:15,282 | INFO     | mean x: 1768118704.0
[2026-01-11 11:08:42] 2026-01-11 09:59:15,282 | INFO     | mean y: 2317535.8533333335
[2026-01-11 11:08:42] 2026-01-11 09:59:15,282 | INFO     | intersect: 4507461469.684585
[2026-01-11 11:08:42] 2026-01-11 09:59:15,282 | INFO     | chi2: 0.8099769774715192
[2026-01-11 11:08:42] 2026-01-11 09:59:15,282 | INFO     | current chi2=0.8099769774715192 (change=61.00411258774656 %)
[2026-01-11 11:08:42] 2026-01-11 09:59:15,283 | INFO     | sum of square deviations: 3301699115.0
[2026-01-11 11:08:42] 2026-01-11 09:59:15,284 | INFO     | sum of deviations: -8211396385.499999
[2026-01-11 11:08:42] 2026-01-11 09:59:15,284 | INFO     | mean x: 1768118856.5
[2026-01-11 11:08:42] 2026-01-11 09:59:15,285 | INFO     | mean y: 2317011.1772727272
[2026-01-11 11:08:42] 2026-01-11 09:59:15,285 | INFO     | intersect: 4399666461.173564
[2026-01-11 11:08:42] 2026-01-11 09:59:15,285 | INFO     | chi2: 0.8096583871309326
[2026-01-11 11:08:42] 2026-01-11 09:59:15,285 | INFO     | current chi2=0.8096583871309326 (change=0.03933325877744085 %)
[2026-01-11 11:08:42] 2026-01-11 09:59:15,285 | INFO     | left removable region: 20
[2026-01-11 11:08:42] 2026-01-11 09:59:15,286 | INFO     | sum of square deviations: 2443580700.0
[2026-01-11 11:08:42] 2026-01-11 09:59:15,287 | INFO     | sum of deviations: 3821827998.0000005
[2026-01-11 11:08:42] 2026-01-11 09:59:15,287 | INFO     | mean x: 1768118826.0
[2026-01-11 11:08:42] 2026-01-11 09:59:15,287 | INFO     | mean y: 2327189.7236180906
[2026-01-11 11:08:42] 2026-01-11 09:59:15,287 | INFO     | intersect: -2763059700.5058274
[2026-01-11 11:08:42] 2026-01-11 09:59:15,288 | INFO     | chi2: 0.00047017489999054906
[2026-01-11 11:08:42] 2026-01-11 09:59:15,288 | INFO     | current memory leak: 1.56 B/s (using 199 data points, chi2=0.00)
[2026-01-11 11:08:42] 2026-01-11 09:59:15,288 | INFO     | could have reported an average CPU frequency of 2638 MHz (11 samples)
[2026-01-11 11:08:42] 2026-01-11 09:59:15,289 | INFO     | ..............................
[2026-01-11 11:08:42] 2026-01-11 09:59:15,289 | INFO     | . Timing measurements:
[2026-01-11 11:08:42] 2026-01-11 09:59:15,289 | INFO     | . get job = 0 s
[2026-01-11 11:08:42] 2026-01-11 09:59:15,289 | INFO     | . initial setup = 1 s
[2026-01-11 11:08:42] 2026-01-11 09:59:15,289 | INFO     | . payload setup = 7 s
[2026-01-11 11:08:42] 2026-01-11 09:59:15,289 | INFO     | . stage-in = 0 s
[2026-01-11 11:08:42] 2026-01-11 09:59:15,289 | INFO     | . payload execution = 13979 s
[2026-01-11 11:08:42] 2026-01-11 09:59:15,289 | INFO     | . stage-out = 1 s
[2026-01-11 11:08:42] 2026-01-11 09:59:15,289 | INFO     | . log creation = 0 s
[2026-01-11 11:08:42] 2026-01-11 09:59:15,289 | INFO     | ..............................
[2026-01-11 11:08:42] 2026-01-11 09:59:15,390 | INFO     | 
[2026-01-11 11:08:42] 2026-01-11 09:59:15,390 | INFO     | job summary report
[2026-01-11 11:08:42] 2026-01-11 09:59:15,391 | INFO     | --------------------------------------------------
[2026-01-11 11:08:42] 2026-01-11 09:59:15,391 | INFO     | PanDA job id: 6962918519
[2026-01-11 11:08:42] 2026-01-11 09:59:15,391 | INFO     | task id: 47898826
[2026-01-11 11:08:42] 2026-01-11 09:59:15,391 | INFO     | errors: (none)
[2026-01-11 11:08:42] 2026-01-11 09:59:15,391 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 11:08:42] 2026-01-11 09:59:15,391 | INFO     | pilot state: finished 
[2026-01-11 11:08:42] 2026-01-11 09:59:15,391 | INFO     | transexitcode: 0
[2026-01-11 11:08:42] 2026-01-11 09:59:15,391 | INFO     | exeerrorcode: 0
[2026-01-11 11:08:42] 2026-01-11 09:59:15,391 | INFO     | exeerrordiag: 
[2026-01-11 11:08:42] 2026-01-11 09:59:15,392 | INFO     | exitcode: 0
[2026-01-11 11:08:42] 2026-01-11 09:59:15,392 | INFO     | exitmsg: OK
[2026-01-11 11:08:42] 2026-01-11 09:59:15,392 | INFO     | cpuconsumptiontime: 53566 s
[2026-01-11 11:08:42] 2026-01-11 09:59:15,392 | INFO     | nevents: 400
[2026-01-11 11:08:42] 2026-01-11 09:59:15,392 | INFO     | neventsw: 0
[2026-01-11 11:08:42] 2026-01-11 09:59:15,392 | INFO     | pid: 3788320
[2026-01-11 11:08:42] 2026-01-11 09:59:15,392 | INFO     | pgrp: 3788320
[2026-01-11 11:08:42] 2026-01-11 09:59:15,392 | INFO     | corecount: 4
[2026-01-11 11:08:42] 2026-01-11 09:59:15,393 | INFO     | event service: False
[2026-01-11 11:08:42] 2026-01-11 09:59:15,393 | INFO     | sizes: {0: 2283141, 1: 2284009, 7: 2284271, 12: 2284299, 13991: 2315381, 13993: 2324587, 14003: 2324725}
[2026-01-11 11:08:42] 2026-01-11 09:59:15,393 | INFO     | --------------------------------------------------
[2026-01-11 11:08:42] 2026-01-11 09:59:15,393 | INFO     | 
[2026-01-11 11:08:42] 2026-01-11 09:59:15,393 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2026-01-11 11:08:42] 2026-01-11 09:59:15,431 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 11:08:42] 2026-01-11 09:59:15,431 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 11:08:42] 2026-01-11 09:59:15,432 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 11:08:42] 2026-01-11 09:59:15,432 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 11:08:42] 2026-01-11 09:59:15,432 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 11:08:42] 2026-01-11 09:59:15,432 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 11:08:42] 2026-01-11 09:59:15,432 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 11:08:42] 2026-01-11 09:59:15,432 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 11:08:42] 2026-01-11 09:59:15,432 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 11:08:42] 2026-01-11 09:59:15,433 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 11:08:42] 2026-01-11 09:59:15,433 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 11:08:42] 2026-01-11 09:59:15,433 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 11:08:42] 2026-01-11 09:59:15,433 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 11:08:42] 2026-01-11 09:59:15,433 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 11:08:42] 2026-01-11 09:59:15,433 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 11:08:42] 2026-01-11 09:59:15,433 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 11:08:42] 2026-01-11 09:59:15,434 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 11:08:42] 2026-01-11 09:59:15,434 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 11:08:42] 2026-01-11 09:59:15,434 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 11:08:42] 2026-01-11 09:59:15,434 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 11:08:42] 2026-01-11 09:59:15,434 | INFO     | job 6962918519 has completed (purged errors)
[2026-01-11 11:08:42] 2026-01-11 09:59:15,434 | INFO     | overall cleanup function is called
[2026-01-11 11:08:42] 2026-01-11 09:59:15,456 | INFO     | PID=3778657 has CPU usage=17.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-11 11:08:42] 2026-01-11 09:59:15,457 | INFO     | .. there are 9 such processes running
[2026-01-11 11:08:42] 2026-01-11 09:59:16,444 | INFO     | --- collectZombieJob: --- 10, [3788320]
[2026-01-11 11:08:42] 2026-01-11 09:59:16,445 | INFO     | zombie collector waiting for pid 3788320
[2026-01-11 11:08:42] 2026-01-11 09:59:16,445 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 11:08:42] 2026-01-11 09:59:16,445 | INFO     | collected zombie processes
[2026-01-11 11:08:42] 2026-01-11 09:59:16,445 | INFO     | will attempt to kill all subprocesses of pid=3788320
[2026-01-11 11:08:42] 2026-01-11 09:59:17,264 | INFO     | process IDs to be killed: [3788320] (in reverse order)
[2026-01-11 11:08:42] 2026-01-11 09:59:17,528 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 11:08:42] 2026-01-11 09:59:17,528 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 11:08:42] 2026-01-11 09:59:17,561 | INFO     | did not find any defunct processes belonging to 3788320
[2026-01-11 11:08:42] 2026-01-11 09:59:17,593 | INFO     | did not find any defunct processes belonging to 3788320
[2026-01-11 11:08:42] 2026-01-11 09:59:17,594 | INFO     | ready for new job
[2026-01-11 11:08:42] 2026-01-11 09:59:17,594 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 11:08:42] 2026-01-11 09:59:17,597 | INFO     | ***************************************
[2026-01-11 11:08:42] 2026-01-11 09:59:17,597 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 11:08:42] 2026-01-11 09:59:17,597 | INFO     | ***************************************
[2026-01-11 11:08:42] 2026-01-11 09:59:17,597 | INFO     | 
[2026-01-11 11:08:42] 2026-01-11 09:59:17,605 | INFO     | architecture information:
[2026-01-11 11:08:42] 2026-01-11 09:59:17,606 | INFO     | executing command: cat /etc/os-release
[2026-01-11 11:08:42] 2026-01-11 09:59:17,629 | INFO     | cat /etc/os-release:
[2026-01-11 11:08:42] NAME="CentOS Linux"
[2026-01-11 11:08:42] VERSION="7 (Core)"
[2026-01-11 11:08:42] ID="centos"
[2026-01-11 11:08:42] ID_LIKE="rhel fedora"
[2026-01-11 11:08:42] VERSION_ID="7"
[2026-01-11 11:08:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 11:08:42] ANSI_COLOR="0;31"
[2026-01-11 11:08:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 11:08:42] HOME_URL="https://www.centos.org/"
[2026-01-11 11:08:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 11:08:42] 
[2026-01-11 11:08:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 11:08:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 11:08:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 11:08:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 11:08:42] 
[2026-01-11 11:08:42] 2026-01-11 09:59:17,629 | INFO     | ***************************************
[2026-01-11 11:08:42] 2026-01-11 09:59:18,132 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2026-01-11 11:08:42] 2026-01-11 09:59:18,157 | INFO     | sufficient remaining disk space (3360297058304 B)
[2026-01-11 11:08:42] 2026-01-11 09:59:18,157 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 11:08:42] 2026-01-11 09:59:18,158 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 11:08:42] 2026-01-11 09:59:18,158 | INFO     | update_server=False
[2026-01-11 11:08:42] 2026-01-11 09:59:18,158 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 11:08:42] 2026-01-11 09:59:18,158 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 11:08:42] 2026-01-11 09:59:18,158 | INFO     | aborting loop
[2026-01-11 11:08:42] 2026-01-11 09:59:18,517 | INFO     | all data control threads have been joined
[2026-01-11 11:08:42] 2026-01-11 09:59:18,602 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 11:08:42] 2026-01-11 09:59:18,828 | INFO     | all job control threads have been joined
[2026-01-11 11:08:42] 2026-01-11 09:59:19,163 | INFO     | [job] retrieve thread has finished
[2026-01-11 11:08:42] 2026-01-11 09:59:19,164 | INFO     | [job] job monitor thread has finished
[2026-01-11 11:08:42] 2026-01-11 09:59:19,264 | INFO     | [payload] failed_post thread has finished
[2026-01-11 11:08:42] 2026-01-11 09:59:19,320 | INFO     | all payload control threads have been joined
[2026-01-11 11:08:42] 2026-01-11 09:59:19,364 | INFO     | [job] validate thread has finished
[2026-01-11 11:08:42] 2026-01-11 09:59:19,522 | INFO     | [data] control thread has finished
[2026-01-11 11:08:42] 2026-01-11 09:59:19,595 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 11:08:42] 2026-01-11 09:59:19,833 | INFO     | [data] copytool_in thread has finished
[2026-01-11 11:08:42] 2026-01-11 09:59:19,834 | INFO     | [job] control thread has finished
[2026-01-11 11:08:42] 2026-01-11 09:59:19,990 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 11:08:42] 2026-01-11 09:59:20,005 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 11:08:42] 2026-01-11 09:59:20,324 | INFO     | [payload] control thread has finished
[2026-01-11 11:08:42] 2026-01-11 09:59:20,400 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 11:08:42] 2026-01-11 09:59:20,607 | INFO     | [data] copytool_out thread has finished
[2026-01-11 11:08:42] 2026-01-11 09:59:20,693 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 11:08:42] 2026-01-11 09:59:20,698 | INFO     | [payload] validate_post thread has finished
[2026-01-11 11:08:42] 2026-01-11 09:59:21,406 | INFO     | [job] queue monitor thread has finished
[2026-01-11 11:08:42] 2026-01-11 09:59:24,700 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 11:08:42] 2026-01-11 09:59:29,040 | INFO     | job.realtimelogging is not enabled
[2026-01-11 11:08:42] 2026-01-11 09:59:30,045 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 11:08:42] 2026-01-11 09:59:48,543 | INFO     | PID=3778657 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 11:08:42] 2026-01-11 09:59:48,543 | INFO     | .. there are 9 such processes running
[2026-01-11 11:08:42] 2026-01-11 09:59:48,544 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 11:08:42] 2026-01-11 09:59:48,544 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 11:08:42] 2026-01-11 09:59:48,544 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 11:08:42] 2026-01-11 09:59:57,711 | INFO     | [monitor] cgroup control has ended
[2026-01-11 11:08:42] 2026-01-11 09:59:58,072 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22881438271296)>', '<ExcThread(monitor, started 22881199159040)>']
[2026-01-11 11:08:42] 2026-01-11 09:59:58,594 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 11:08:42] 2026-01-11 09:59:58,595 | INFO     | [monitor] control thread has ended
[2026-01-11 11:08:42] 2026-01-11 10:00:03,097 | INFO     | all workflow threads have been joined
[2026-01-11 11:08:42] 2026-01-11 10:00:03,098 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 11:08:42] 2026-01-11 10:00:03,098 | INFO     | traces error code: 0
[2026-01-11 11:08:42] 2026-01-11 10:00:03,098 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 11:08:42] 2026-01-11 10:00:03,259 [wrapper] ==== pilot stdout END ====
[2026-01-11 11:08:42] 2026-01-11 10:00:03,263 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 11:08:42] 2026-01-11 10:00:03,271 [wrapper] pilotpid: 3778657
[2026-01-11 11:08:42] 2026-01-11 10:00:03,275 [wrapper] Pilot exit status: 0
[2026-01-11 11:08:42] 2026-01-11 10:00:03,292 [wrapper] pandaids: 6962918519
[2026-01-11 11:08:42] 2026-01-11 10:00:03,483 [wrapper] cleanup supervisor_pilot   88628 3778658
[2026-01-11 11:08:42] 2026-01-11 10:00:03,488 [wrapper] Test setup, not cleaning
[2026-01-11 11:08:42] 2026-01-11 10:00:03,492 [wrapper] apfmon messages muted
[2026-01-11 11:08:42] 2026-01-11 10:00:03,496 [wrapper] ==== wrapper stdout END ====
[2026-01-11 11:08:42] 2026-01-11 10:00:03,500 [wrapper] ==== wrapper stderr END ====
[2026-01-11 11:08:42]  *** Error codes and diagnostics ***
[2026-01-11 11:08:42]     "exeErrorCode": 0,
[2026-01-11 11:08:42]     "exeErrorDiag": "",
[2026-01-11 11:08:42]     "pilotErrorCode": 0,
[2026-01-11 11:08:42]     "pilotErrorDiag": "",
[2026-01-11 11:08:42]  *** Listing of results directory ***
[2026-01-11 11:08:42] total 439880
[2026-01-11 11:08:42] -rw-r--r-- 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-11 11:08:42] -rwx------ 1 boinc boinc     36322 Jan  8 09:04 runpilot2-wrapper.sh
[2026-01-11 11:08:42] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:07 queuedata.json
[2026-01-11 11:08:42] -rw-r--r-- 1 boinc boinc       100 Jan 11 07:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 11:08:42] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 07:05 run_atlas
[2026-01-11 11:08:42] -rw-r--r-- 1 boinc boinc       105 Jan 11 07:05 job.xml
[2026-01-11 11:08:42] -rw-r--r-- 1 boinc boinc      6692 Jan 11 07:05 init_data.xml
[2026-01-11 11:08:42] -rw-r--r-- 2 boinc boinc 226464975 Jan 11 07:05 EVNT.47898824._000798.pool.root.1
[2026-01-11 11:08:42] -rw-r--r-- 2 boinc boinc     15847 Jan 11 07:05 start_atlas.sh
[2026-01-11 11:08:42] drwxrwx--x 2 boinc boinc      4096 Jan 11 07:05 shared
[2026-01-11 11:08:42] -rw-r--r-- 2 boinc boinc    592404 Jan 11 07:05 input.tar.gz
[2026-01-11 11:08:42] -rw-r--r-- 1 boinc boinc         0 Jan 11 07:05 boinc_lockfile
[2026-01-11 11:08:42] -rw-r--r-- 1 boinc boinc      2519 Jan 11 07:05 pandaJob.out
[2026-01-11 11:08:42] -rw------- 1 boinc boinc    989548 Jan 11 07:05 agis_schedconf.cvmfs.json
[2026-01-11 11:08:42] drwx------ 5 boinc boinc      4096 Jan 11 07:05 pilot3
[2026-01-11 11:08:42] -rw------- 1 boinc boinc 215365107 Jan 11 10:58 HITS.47898826._020567.pool.root.1
[2026-01-11 11:08:42] -rw-r--r-- 1 boinc boinc       528 Jan 11 10:58 boinc_task_state.xml
[2026-01-11 11:08:42] -rw------- 1 boinc boinc      1032 Jan 11 10:59 memory_monitor_summary.json
[2026-01-11 11:08:42] -rw------- 1 boinc boinc   1516240 Jan 11 10:59 agis_ddmendpoints.agis.ALL.json
[2026-01-11 11:08:42] -rw------- 1 boinc boinc    406517 Jan 11 10:59 log.47898826._020567.job.log.tgz.1
[2026-01-11 11:08:42] -rw------- 1 boinc boinc      7790 Jan 11 10:59 heartbeat.json
[2026-01-11 11:08:42] -rw------- 1 boinc boinc        95 Jan 11 10:59 pilot_heartbeat.json
[2026-01-11 11:08:42] -rw------- 1 boinc boinc      4907 Jan 11 11:00 pilotlog.txt
[2026-01-11 11:08:42] -rw------- 1 boinc boinc   1938058 Jan 11 11:00 log.47898826._020567.job.log.1
[2026-01-11 11:08:42] -rw------- 1 boinc boinc       357 Jan 11 11:00 output.list
[2026-01-11 11:08:42] -rw-r--r-- 1 boinc boinc       620 Jan 11 11:00 runtime_log
[2026-01-11 11:08:42] -rw------- 1 boinc boinc   2365440 Jan 11 11:00 result.tar.gz
[2026-01-11 11:08:42] -rw-r--r-- 1 boinc boinc      9223 Jan 11 11:00 runtime_log.err
[2026-01-11 11:08:42] -rw------- 1 boinc boinc       666 Jan 11 11:00 XHnLDmZB0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8XeKDmF5Yjun.diag
[2026-01-11 11:08:42] -rw-r--r-- 1 boinc boinc        26 Jan 11 11:08 wrapper_checkpoint.txt
[2026-01-11 11:08:42] -rw-r--r-- 1 boinc boinc      8192 Jan 11 11:08 boinc_mmap_file
[2026-01-11 11:08:42] -rw-r--r-- 1 boinc boinc     20975 Jan 11 11:08 stderr.txt
[2026-01-11 11:08:42] HITS file was successfully produced:
[2026-01-11 11:08:42] -rw------- 1 boinc boinc 215365107 Jan 11 10:58 shared/HITS.pool.root.1
[2026-01-11 11:08:42]  *** Contents of shared directory: ***
[2026-01-11 11:08:42] total 434392
[2026-01-11 11:08:42] -rw-r--r-- 2 boinc boinc 226464975 Jan 11 07:05 ATLAS.root_0
[2026-01-11 11:08:42] -rw-r--r-- 2 boinc boinc     15847 Jan 11 07:05 start_atlas.sh
[2026-01-11 11:08:42] -rw-r--r-- 2 boinc boinc    592404 Jan 11 07:05 input.tar.gz
[2026-01-11 11:08:42] -rw------- 1 boinc boinc 215365107 Jan 11 10:58 HITS.pool.root.1
[2026-01-11 11:08:42] -rw------- 1 boinc boinc   2365440 Jan 11 11:00 result.tar.gz
11:08:43 (3774652): run_atlas exited; CPU time 54559.504809
11:08:43 (3774652): called boinc_finish(0)

</stderr_txt>
]]>

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