Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:53:33 (9733): wrapper (7.7.26015): starting
16:53:33 (9733): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 16:53:33] Arguments: --nthreads 8
[2026-01-08 16:53:33] Threads: 8
[2026-01-08 16:53:33] Checking for CVMFS
[2026-01-08 16:53:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 16:53:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 16:53:34] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 16:53:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 16:53:36] 2.11.2.0 15680 34179 99508 154912 0 61 17285627 25165824 96 130560 0 15464549 99.796 11073849 3124 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 16:53:36] CVMFS is ok
[2026-01-08 16:53:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 16:53:36] Checking for apptainer binary...
[2026-01-08 16:53:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 16:53:36] Running /usr/bin/apptainer --version
[2026-01-08 16:53:36] apptainer version 1.3.2-1.el7
[2026-01-08 16:53:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 16:53:53] cg-vwn486.simple-grid.lan
[2026-01-08 16:53:53] apptainer works
[2026-01-08 16:53:53] Set ATHENA_PROC_NUMBER=8
[2026-01-08 16:53:53] Set ATHENA_CORE_NUMBER=8
[2026-01-08 16:53:53] Starting ATLAS job with PandaID=6962918508
[2026-01-08 16:53:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 22:43:26]  *** The last 200 lines of the pilot log: ***
[2026-01-08 22:43:27] 2026-01-08 21:42:36,002 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-6962918508/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 22:43:27] 2026-01-08 21:42:36,002 | INFO     | extracted standard info from prmon json
[2026-01-08 22:43:27] 2026-01-08 21:42:36,002 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 22:43:27] 2026-01-08 21:42:36,002 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 22:43:27] 2026-01-08 21:42:36,003 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 22:43:27] 2026-01-08 21:42:36,003 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 22:43:27] 2026-01-08 21:42:36,016 | INFO     | fitting pss+swap vs Time
[2026-01-08 22:43:27] 2026-01-08 21:42:36,016 | INFO     | sum of square deviations: 10941980042.0
[2026-01-08 22:43:27] 2026-01-08 21:42:36,020 | INFO     | sum of deviations: 153551162644.50003
[2026-01-08 22:43:27] 2026-01-08 21:42:36,020 | INFO     | mean x: 1767898409.5
[2026-01-08 22:43:27] 2026-01-08 21:42:36,020 | INFO     | mean y: 2454659.2225609757
[2026-01-08 22:43:27] 2026-01-08 21:42:36,020 | INFO     | intersect: -24806844496.33218
[2026-01-08 22:43:27] 2026-01-08 21:42:36,021 | INFO     | chi2: 7.834987294364109
[2026-01-08 22:43:27] 2026-01-08 21:42:36,021 | INFO     | sum of square deviations: 10449170802.0
[2026-01-08 22:43:27] 2026-01-08 21:42:36,025 | INFO     | sum of deviations: 172947327795.00006
[2026-01-08 22:43:27] 2026-01-08 21:42:36,025 | INFO     | mean x: 1767898257.0
[2026-01-08 22:43:27] 2026-01-08 21:42:36,025 | INFO     | mean y: 2460577.987616099
[2026-01-08 22:43:27] 2026-01-08 21:42:36,025 | INFO     | intersect: -29258548276.711765
[2026-01-08 22:43:27] 2026-01-08 21:42:36,026 | INFO     | chi2: 7.112433364080431
[2026-01-08 22:43:27] 2026-01-08 21:42:36,026 | INFO     | current chi2=7.112433364080431 (change=9.222145526686791 %)
[2026-01-08 22:43:27] 2026-01-08 21:42:36,026 | INFO     | right removable region: 322
[2026-01-08 22:43:27] 2026-01-08 21:42:36,027 | INFO     | sum of square deviations: 10449170802.0
[2026-01-08 22:43:27] 2026-01-08 21:42:36,030 | INFO     | sum of deviations: 43454049975.0
[2026-01-08 22:43:27] 2026-01-08 21:42:36,030 | INFO     | mean x: 1767898562.0
[2026-01-08 22:43:27] 2026-01-08 21:42:36,030 | INFO     | mean y: 2488705.198142415
[2026-01-08 22:43:27] 2026-01-08 21:42:36,030 | INFO     | intersect: -7349515958.097688
[2026-01-08 22:43:27] 2026-01-08 21:42:36,031 | INFO     | chi2: 3.374866697857505
[2026-01-08 22:43:27] 2026-01-08 21:42:36,031 | INFO     | current chi2=3.374866697857505 (change=56.92569022689895 %)
[2026-01-08 22:43:27] 2026-01-08 21:42:36,032 | INFO     | sum of square deviations: 9971385099.5
[2026-01-08 22:43:27] 2026-01-08 21:42:36,035 | INFO     | sum of deviations: -38597610066.0
[2026-01-08 22:43:27] 2026-01-08 21:42:36,035 | INFO     | mean x: 1767898714.5
[2026-01-08 22:43:27] 2026-01-08 21:42:36,035 | INFO     | mean y: 2514869.5911949687
[2026-01-08 22:43:27] 2026-01-08 21:42:36,035 | INFO     | intersect: 6845763278.668816
[2026-01-08 22:43:27] 2026-01-08 21:42:36,036 | INFO     | chi2: 1.0154847566432599
[2026-01-08 22:43:27] 2026-01-08 21:42:36,036 | INFO     | current chi2=1.0154847566432599 (change=69.91037431825296 %)
[2026-01-08 22:43:27] 2026-01-08 21:42:36,036 | INFO     | sum of square deviations: 9508390372.0
[2026-01-08 22:43:27] 2026-01-08 21:42:36,040 | INFO     | sum of deviations: -57544765715.0
[2026-01-08 22:43:27] 2026-01-08 21:42:36,040 | INFO     | mean x: 1767898867.0
[2026-01-08 22:43:27] 2026-01-08 21:42:36,040 | INFO     | mean y: 2521087.392971246
[2026-01-08 22:43:27] 2026-01-08 21:42:36,040 | INFO     | intersect: 10701842647.528948
[2026-01-08 22:43:27] 2026-01-08 21:42:36,041 | INFO     | chi2: 0.8484718127907213
[2026-01-08 22:43:27] 2026-01-08 21:42:36,041 | INFO     | current chi2=0.8484718127907213 (change=16.44662243917959 %)
[2026-01-08 22:43:27] 2026-01-08 21:42:36,041 | INFO     | left removable region: 30
[2026-01-08 22:43:27] 2026-01-08 21:42:36,042 | INFO     | sum of square deviations: 7720081493.0
[2026-01-08 22:43:27] 2026-01-08 21:42:36,044 | INFO     | sum of deviations: -26792115884.499996
[2026-01-08 22:43:27] 2026-01-08 21:42:36,045 | INFO     | mean x: 1767899141.5
[2026-01-08 22:43:27] 2026-01-08 21:42:36,045 | INFO     | mean y: 2525111.421232877
[2026-01-08 22:43:27] 2026-01-08 21:42:36,045 | INFO     | intersect: 6137921313.407421
[2026-01-08 22:43:27] 2026-01-08 21:42:36,045 | INFO     | chi2: 0.06034705185797022
[2026-01-08 22:43:27] 2026-01-08 21:42:36,046 | INFO     | current memory leak: -3.47 B/s (using 292 data points, chi2=0.06)
[2026-01-08 22:43:27] 2026-01-08 21:42:36,046 | INFO     | could have reported an average CPU frequency of 2249 MHz (14 samples)
[2026-01-08 22:43:27] 2026-01-08 21:42:36,046 | INFO     | ..............................
[2026-01-08 22:43:27] 2026-01-08 21:42:36,047 | INFO     | . Timing measurements:
[2026-01-08 22:43:27] 2026-01-08 21:42:36,047 | INFO     | . get job = 0 s
[2026-01-08 22:43:27] 2026-01-08 21:42:36,047 | INFO     | . initial setup = 11 s
[2026-01-08 22:43:27] 2026-01-08 21:42:36,047 | INFO     | . payload setup = 141 s
[2026-01-08 22:43:27] 2026-01-08 21:42:36,047 | INFO     | . stage-in = 0 s
[2026-01-08 22:43:27] 2026-01-08 21:42:36,047 | INFO     | . payload execution = 20163 s
[2026-01-08 22:43:27] 2026-01-08 21:42:36,047 | INFO     | . stage-out = 4 s
[2026-01-08 22:43:27] 2026-01-08 21:42:36,047 | INFO     | . log creation = 1 s
[2026-01-08 22:43:27] 2026-01-08 21:42:36,047 | INFO     | ..............................
[2026-01-08 22:43:27] 2026-01-08 21:42:36,208 | INFO     | 
[2026-01-08 22:43:27] 2026-01-08 21:42:36,209 | INFO     | job summary report
[2026-01-08 22:43:27] 2026-01-08 21:42:36,209 | INFO     | --------------------------------------------------
[2026-01-08 22:43:27] 2026-01-08 21:42:36,209 | INFO     | PanDA job id: 6962918508
[2026-01-08 22:43:27] 2026-01-08 21:42:36,209 | INFO     | task id: 47898826
[2026-01-08 22:43:27] 2026-01-08 21:42:36,210 | INFO     | errors: (none)
[2026-01-08 22:43:27] 2026-01-08 21:42:36,211 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 22:43:27] 2026-01-08 21:42:36,211 | INFO     | pilot state: finished 
[2026-01-08 22:43:27] 2026-01-08 21:42:36,211 | INFO     | transexitcode: 0
[2026-01-08 22:43:27] 2026-01-08 21:42:36,211 | INFO     | exeerrorcode: 0
[2026-01-08 22:43:27] 2026-01-08 21:42:36,211 | INFO     | exeerrordiag: 
[2026-01-08 22:43:27] 2026-01-08 21:42:36,211 | INFO     | exitcode: 0
[2026-01-08 22:43:27] 2026-01-08 21:42:36,211 | INFO     | exitmsg: OK
[2026-01-08 22:43:27] 2026-01-08 21:42:36,211 | INFO     | cpuconsumptiontime: 75739 s
[2026-01-08 22:43:27] 2026-01-08 21:42:36,211 | INFO     | nevents: 400
[2026-01-08 22:43:27] 2026-01-08 21:42:36,212 | INFO     | neventsw: 0
[2026-01-08 22:43:27] 2026-01-08 21:42:36,212 | INFO     | pid: 20004
[2026-01-08 22:43:27] 2026-01-08 21:42:36,212 | INFO     | pgrp: 20004
[2026-01-08 22:43:27] 2026-01-08 21:42:36,212 | INFO     | corecount: 8
[2026-01-08 22:43:27] 2026-01-08 21:42:36,212 | INFO     | event service: False
[2026-01-08 22:43:27] 2026-01-08 21:42:36,212 | INFO     | sizes: {0: 2283141, 1: 2283998, 2: 2284026, 12: 2284026, 23: 2284054, 34: 2284082, 45: 2284238, 55: 2284266, 66: 2284294, 77: 2284322, 87: 2284378, 98: 2284686, 10
[2026-01-08 22:43:27] 2026-01-08 21:42:36,212 | INFO     | --------------------------------------------------
[2026-01-08 22:43:27] 2026-01-08 21:42:36,212 | INFO     | 
[2026-01-08 22:43:27] 2026-01-08 21:42:36,212 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2026-01-08 22:43:27] 2026-01-08 21:42:36,230 | INFO     | time since job start (20637s) is within the limit (174528.0s)
[2026-01-08 22:43:27] 2026-01-08 21:42:36,752 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 22:43:27] 2026-01-08 21:42:36,752 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 22:43:27] 2026-01-08 21:42:36,752 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 22:43:27] 2026-01-08 21:42:36,752 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 22:43:27] 2026-01-08 21:42:36,752 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 22:43:27] 2026-01-08 21:42:36,753 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 22:43:27] 2026-01-08 21:42:36,753 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 22:43:27] 2026-01-08 21:42:36,753 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 22:43:27] 2026-01-08 21:42:36,753 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 22:43:27] 2026-01-08 21:42:36,753 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 22:43:27] 2026-01-08 21:42:36,753 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 22:43:27] 2026-01-08 21:42:36,753 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 22:43:27] 2026-01-08 21:42:36,753 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 22:43:27] 2026-01-08 21:42:36,753 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 22:43:27] 2026-01-08 21:42:36,754 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 22:43:27] 2026-01-08 21:42:36,754 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 22:43:27] 2026-01-08 21:42:36,754 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 22:43:27] 2026-01-08 21:42:36,754 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 22:43:27] 2026-01-08 21:42:36,754 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 22:43:27] 2026-01-08 21:42:36,754 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 22:43:27] 2026-01-08 21:42:36,754 | INFO     | job 6962918508 has completed (purged errors)
[2026-01-08 22:43:27] 2026-01-08 21:42:36,754 | INFO     | overall cleanup function is called
[2026-01-08 22:43:27] 2026-01-08 21:42:37,334 | INFO     | PID=13479 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 22:43:27] 2026-01-08 21:42:37,335 | INFO     | .. there are 2 such processes running
[2026-01-08 22:43:27] 2026-01-08 21:42:37,763 | INFO     | --- collectZombieJob: --- 10, [20004]
[2026-01-08 22:43:27] 2026-01-08 21:42:37,764 | INFO     | zombie collector waiting for pid 20004
[2026-01-08 22:43:27] 2026-01-08 21:42:37,764 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 22:43:27] 2026-01-08 21:42:37,764 | INFO     | collected zombie processes
[2026-01-08 22:43:27] 2026-01-08 21:42:37,764 | INFO     | will attempt to kill all subprocesses of pid=20004
[2026-01-08 22:43:27] 2026-01-08 21:42:37,849 | INFO     | process IDs to be killed: [20004] (in reverse order)
[2026-01-08 22:43:27] 2026-01-08 21:42:38,696 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 22:43:27] 2026-01-08 21:42:38,696 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 22:43:27] 2026-01-08 21:42:38,698 | INFO     | did not find any defunct processes belonging to 20004
[2026-01-08 22:43:27] 2026-01-08 21:42:38,700 | INFO     | did not find any defunct processes belonging to 20004
[2026-01-08 22:43:27] 2026-01-08 21:42:38,700 | INFO     | ready for new job
[2026-01-08 22:43:27] 2026-01-08 21:42:38,700 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 22:43:27] 2026-01-08 21:42:38,702 | INFO     | ***************************************
[2026-01-08 22:43:27] 2026-01-08 21:42:38,703 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 22:43:27] 2026-01-08 21:42:38,703 | INFO     | ***************************************
[2026-01-08 22:43:27] 2026-01-08 21:42:38,703 | INFO     | 
[2026-01-08 22:43:27] 2026-01-08 21:42:38,703 | INFO     | pilot is running in a VM
[2026-01-08 22:43:27] 2026-01-08 21:42:38,704 | INFO     | architecture information:
[2026-01-08 22:43:27] 2026-01-08 21:42:38,714 | INFO     | executing command: cat /etc/os-release
[2026-01-08 22:43:27] 2026-01-08 21:42:38,903 | INFO     | cat /etc/os-release:
[2026-01-08 22:43:27] NAME="CentOS Linux"
[2026-01-08 22:43:27] VERSION="7 (Core)"
[2026-01-08 22:43:27] ID="centos"
[2026-01-08 22:43:27] ID_LIKE="rhel fedora"
[2026-01-08 22:43:27] VERSION_ID="7"
[2026-01-08 22:43:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 22:43:27] ANSI_COLOR="0;31"
[2026-01-08 22:43:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 22:43:27] HOME_URL="https://www.centos.org/"
[2026-01-08 22:43:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 22:43:27] 
[2026-01-08 22:43:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 22:43:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 22:43:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 22:43:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 22:43:27] 
[2026-01-08 22:43:27] 2026-01-08 21:42:38,903 | INFO     | ***************************************
[2026-01-08 22:43:27] 2026-01-08 21:42:39,407 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2026-01-08 22:43:27] 2026-01-08 21:42:39,579 | INFO     | sufficient remaining disk space (496028876800 B)
[2026-01-08 22:43:27] 2026-01-08 21:42:39,579 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 22:43:27] 2026-01-08 21:42:39,580 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 22:43:27] 2026-01-08 21:42:39,580 | INFO     | update_server=False
[2026-01-08 22:43:27] 2026-01-08 21:42:39,580 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 22:43:27] 2026-01-08 21:42:40,052 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 22:43:27] 2026-01-08 21:42:40,142 | INFO     | all data control threads have been joined
[2026-01-08 22:43:27] 2026-01-08 21:42:40,332 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 22:43:27] 2026-01-08 21:42:40,333 | INFO     | aborting loop
[2026-01-08 22:43:27] 2026-01-08 21:42:40,377 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 22:43:27] 2026-01-08 21:42:40,586 | INFO     | [job] retrieve thread has finished
[2026-01-08 22:43:27] 2026-01-08 21:42:40,824 | INFO     | all payload control threads have been joined
[2026-01-08 22:43:27] 2026-01-08 21:42:40,851 | INFO     | all job control threads have been joined
[2026-01-08 22:43:27] 2026-01-08 21:42:40,911 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 22:43:27] 2026-01-08 21:42:40,914 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 22:43:27] 2026-01-08 21:42:41,148 | INFO     | [data] control thread has finished
[2026-01-08 22:43:27] 2026-01-08 21:42:41,216 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 22:43:27] 2026-01-08 21:42:41,223 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 22:43:27] 2026-01-08 21:42:41,338 | INFO     | [job] job monitor thread has finished
[2026-01-08 22:43:27] 2026-01-08 21:42:41,512 | INFO     | [payload] validate_post thread has finished
[2026-01-08 22:43:27] 2026-01-08 21:42:41,567 | INFO     | [data] copytool_in thread has finished
[2026-01-08 22:43:27] 2026-01-08 21:42:41,618 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 22:43:27] 2026-01-08 21:42:41,729 | INFO     | [job] validate thread has finished
[2026-01-08 22:43:27] 2026-01-08 21:42:41,767 | INFO     | [payload] failed_post thread has finished
[2026-01-08 22:43:27] 2026-01-08 21:42:41,830 | INFO     | [payload] control thread has finished
[2026-01-08 22:43:27] 2026-01-08 21:42:41,857 | INFO     | [job] control thread has finished
[2026-01-08 22:43:27] 2026-01-08 21:42:42,229 | INFO     | [job] queue monitor thread has finished
[2026-01-08 22:43:27] 2026-01-08 21:42:42,384 | INFO     | [data] copytool_out thread has finished
[2026-01-08 22:43:27] 2026-01-08 21:42:44,061 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 22:43:27] 2026-01-08 21:43:09,446 | INFO     | PID=13479 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 22:43:27] 2026-01-08 21:43:09,446 | INFO     | .. there are 2 such processes running
[2026-01-08 22:43:27] 2026-01-08 21:43:09,446 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 22:43:27] 2026-01-08 21:43:09,446 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 22:43:27] 2026-01-08 21:43:09,446 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 22:43:27] 2026-01-08 21:43:14,736 | INFO     | [monitor] cgroup control has ended
[2026-01-08 22:43:27] 2026-01-08 21:43:16,761 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139901363943232)>', '<ExcThread(monitor, started 139900640818944)>']
[2026-01-08 22:43:27] 2026-01-08 21:43:17,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 22:43:27] 2026-01-08 21:43:17,495 | INFO     | [monitor] control thread has ended
[2026-01-08 22:43:27] 2026-01-08 21:43:21,787 | INFO     | all workflow threads have been joined
[2026-01-08 22:43:27] 2026-01-08 21:43:21,788 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 22:43:27] 2026-01-08 21:43:21,788 | INFO     | traces error code: 0
[2026-01-08 22:43:27] 2026-01-08 21:43:21,788 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 22:43:27] 2026-01-08 21:43:22,222 [wrapper] ==== pilot stdout END ====
[2026-01-08 22:43:27] 2026-01-08 21:43:22,334 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 22:43:27] 2026-01-08 21:43:22,438 [wrapper] pilotpid: 13479
[2026-01-08 22:43:27] 2026-01-08 21:43:22,507 [wrapper] Pilot exit status: 0
[2026-01-08 22:43:27] 2026-01-08 21:43:23,111 [wrapper] pandaids: 6962918508
[2026-01-08 22:43:27] 2026-01-08 21:43:24,167 [wrapper] cleanup supervisor_pilot 17942 13480
[2026-01-08 22:43:27] 2026-01-08 21:43:24,294 [wrapper] Test setup, not cleaning
[2026-01-08 22:43:27] 2026-01-08 21:43:24,401 [wrapper] apfmon messages muted
[2026-01-08 22:43:27] 2026-01-08 21:43:24,508 [wrapper] ==== wrapper stdout END ====
[2026-01-08 22:43:27] 2026-01-08 21:43:24,603 [wrapper] ==== wrapper stderr END ====
[2026-01-08 22:43:27]  *** Error codes and diagnostics ***
[2026-01-08 22:43:27]     "exeErrorCode": 0,
[2026-01-08 22:43:27]     "exeErrorDiag": "",
[2026-01-08 22:43:27]     "pilotErrorCode": 0,
[2026-01-08 22:43:27]     "pilotErrorDiag": "",
[2026-01-08 22:43:27]  *** Listing of results directory ***
[2026-01-08 22:43:27] total 448736
[2026-01-08 22:43:27] -rw-r--r--. 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-08 22:43:27] -rwx------. 1 boinc boinc     36322 Jan  8 09:04 runpilot2-wrapper.sh
[2026-01-08 22:43:27] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:07 queuedata.json
[2026-01-08 22:43:27] -rw-r--r--. 1 boinc boinc       100 Jan  8 16:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 22:43:27] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 16:53 run_atlas
[2026-01-08 22:43:27] -rw-r--r--. 1 boinc boinc       105 Jan  8 16:53 job.xml
[2026-01-08 22:43:27] -rw-r--r--. 1 boinc boinc      6389 Jan  8 16:53 init_data.xml
[2026-01-08 22:43:27] -rw-r--r--. 2 boinc boinc 226464975 Jan  8 16:53 EVNT.47898824._000798.pool.root.1
[2026-01-08 22:43:27] -rw-r--r--. 2 boinc boinc     15847 Jan  8 16:53 start_atlas.sh
[2026-01-08 22:43:27] drwxrwx--x. 2 boinc boinc        68 Jan  8 16:53 shared
[2026-01-08 22:43:27] -rw-r--r--. 2 boinc boinc    592401 Jan  8 16:53 input.tar.gz
[2026-01-08 22:43:27] -rw-r--r--. 1 boinc boinc         0 Jan  8 16:53 boinc_lockfile
[2026-01-08 22:43:27] -rw-r--r--. 1 boinc boinc      2519 Jan  8 16:53 pandaJob.out
[2026-01-08 22:43:27] -rw-------. 1 boinc boinc    989843 Jan  8 16:58 agis_schedconf.cvmfs.json
[2026-01-08 22:43:27] drwx------. 5 boinc boinc      4096 Jan  8 16:58 pilot3
[2026-01-08 22:43:27] -rw-------. 1 boinc boinc 222586512 Jan  8 22:39 HITS.47898826._020556.pool.root.1
[2026-01-08 22:43:27] -rw-r--r--. 1 boinc boinc       531 Jan  8 22:39 boinc_task_state.xml
[2026-01-08 22:43:27] -rw-------. 1 boinc boinc      1025 Jan  8 22:40 memory_monitor_summary.json
[2026-01-08 22:43:27] -rw-------. 1 boinc boinc   1516240 Jan  8 22:40 agis_ddmendpoints.agis.ALL.json
[2026-01-08 22:43:27] -rw-------. 1 boinc boinc    529444 Jan  8 22:40 log.47898826._020556.job.log.tgz.1
[2026-01-08 22:43:27] -rw-------. 1 boinc boinc        95 Jan  8 22:42 pilot_heartbeat.json
[2026-01-08 22:43:27] -rw-------. 1 boinc boinc      7774 Jan  8 22:42 heartbeat.json
[2026-01-08 22:43:27] -rw-r--r--. 1 boinc boinc      8192 Jan  8 22:42 boinc_mmap_file
[2026-01-08 22:43:27] -rw-r--r--. 1 boinc boinc        28 Jan  8 22:42 wrapper_checkpoint.txt
[2026-01-08 22:43:27] -rw-------. 1 boinc boinc      4885 Jan  8 22:43 pilotlog.txt
[2026-01-08 22:43:27] -rw-------. 1 boinc boinc   2744738 Jan  8 22:43 log.47898826._020556.job.log.1
[2026-01-08 22:43:27] -rw-------. 1 boinc boinc       357 Jan  8 22:43 output.list
[2026-01-08 22:43:27] -rw-r--r--. 1 boinc boinc       620 Jan  8 22:43 runtime_log
[2026-01-08 22:43:27] -rw-------. 1 boinc boinc   3297280 Jan  8 22:43 result.tar.gz
[2026-01-08 22:43:27] -rw-r--r--. 1 boinc boinc      8833 Jan  8 22:43 runtime_log.err
[2026-01-08 22:43:27] -rw-------. 1 boinc boinc       657 Jan  8 22:43 DrcLDmZB0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1XeKDmJoTrhn.diag
[2026-01-08 22:43:27] -rw-r--r--. 1 boinc boinc     20872 Jan  8 22:43 stderr.txt
[2026-01-08 22:43:27] HITS file was successfully produced:
[2026-01-08 22:43:27] -rw-------. 1 boinc boinc 222586512 Jan  8 22:39 shared/HITS.pool.root.1
[2026-01-08 22:43:27]  *** Contents of shared directory: ***
[2026-01-08 22:43:27] total 442348
[2026-01-08 22:43:27] -rw-r--r--. 2 boinc boinc 226464975 Jan  8 16:53 ATLAS.root_0
[2026-01-08 22:43:27] -rw-r--r--. 2 boinc boinc     15847 Jan  8 16:53 start_atlas.sh
[2026-01-08 22:43:27] -rw-r--r--. 2 boinc boinc    592401 Jan  8 16:53 input.tar.gz
[2026-01-08 22:43:27] -rw-------. 1 boinc boinc 222586512 Jan  8 22:39 HITS.pool.root.1
[2026-01-08 22:43:27] -rw-------. 1 boinc boinc   3297280 Jan  8 22:43 result.tar.gz
22:43:28 (9733): run_atlas exited; CPU time 75938.014570
22:43:28 (9733): called boinc_finish(0)

</stderr_txt>
]]>

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