Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:17:58 (1863094): wrapper (7.7.26015): starting
02:17:58 (1863094): wrapper: running run_atlas (--nthreads 4)
[2026-01-12 02:17:58] Arguments: --nthreads 4
[2026-01-12 02:17:58] Threads: 4
[2026-01-12 02:17:58] Checking for CVMFS
[2026-01-12 02:17:58] No cvmfs_config command found, will try listing directly
[2026-01-12 02:17:58] CVMFS is ok
[2026-01-12 02:17:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 02:17:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 02:17:58] Further information can be found at the LHC@home message board.
[2026-01-12 02:17:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 02:17:58] Checking for apptainer binary...
[2026-01-12 02:17:58] which: no apptainer in ((null))
[2026-01-12 02:17:58] apptainer is not installed, using version from CVMFS
[2026-01-12 02:17:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 02:17:58] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-01-12 02:17:58] apptainer works
[2026-01-12 02:17:58] Set ATHENA_PROC_NUMBER=4
[2026-01-12 02:17:58] Set ATHENA_CORE_NUMBER=4
[2026-01-12 02:17:58] Starting ATLAS job with PandaID=6962918438
[2026-01-12 02:17:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 05:57:40]  *** The last 200 lines of the pilot log: ***
[2026-01-12 05:57:40] 2026-01-12 04:45:50,709 | INFO     | time since job start (12458s) is within the limit (174528.0s)
[2026-01-12 05:57:40] 2026-01-12 04:45:50,926 | INFO     | monitor loop #857: job 0:6962918438 is in state 'finished'
[2026-01-12 05:57:40] 2026-01-12 04:45:50,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 05:57:40] 2026-01-12 04:45:52,715 | INFO     | time since job start (12460s) is within the limit (174528.0s)
[2026-01-12 05:57:40] 2026-01-12 04:45:53,430 | INFO     | monitor loop #858: job 0:6962918438 is in state 'finished'
[2026-01-12 05:57:40] 2026-01-12 04:45:53,430 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 05:57:40] 2026-01-12 04:45:54,721 | INFO     | time since job start (12462s) is within the limit (174528.0s)
[2026-01-12 05:57:40] 2026-01-12 04:45:55,350 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 05:57:40] 2026-01-12 04:45:55,372 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2693.86178125
[2026-01-12 05:57:40] 2026-01-12 04:45:55,397 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6962918438/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 05:57:40] 2026-01-12 04:45:55,398 | INFO     | extracted standard info from prmon json
[2026-01-12 05:57:40] 2026-01-12 04:45:55,398 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 05:57:40] 2026-01-12 04:45:55,398 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 05:57:40] 2026-01-12 04:45:55,398 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 05:57:40] 2026-01-12 04:45:55,398 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 05:57:40] 2026-01-12 04:45:55,402 | INFO     | fitting pss+swap vs Time
[2026-01-12 05:57:40] 2026-01-12 04:45:55,403 | INFO     | sum of square deviations: 2632440055.0
[2026-01-12 05:57:40] 2026-01-12 04:45:55,404 | INFO     | sum of deviations: -42064444538.00001
[2026-01-12 05:57:40] 2026-01-12 04:45:55,404 | INFO     | mean x: 1768186916.5
[2026-01-12 05:57:40] 2026-01-12 04:45:55,404 | INFO     | mean y: 2411516.911764706
[2026-01-12 05:57:40] 2026-01-12 04:45:55,404 | INFO     | intersect: 28256730296.42582
[2026-01-12 05:57:40] 2026-01-12 04:45:55,404 | INFO     | chi2: 1.4051578266320102
[2026-01-12 05:57:40] 2026-01-12 04:45:55,405 | INFO     | sum of square deviations: 2443580700.0
[2026-01-12 05:57:40] 2026-01-12 04:45:55,406 | INFO     | sum of deviations: -40485851402.00001
[2026-01-12 05:57:40] 2026-01-12 04:45:55,406 | INFO     | mean x: 1768186764.0
[2026-01-12 05:57:40] 2026-01-12 04:45:55,406 | INFO     | mean y: 2412792.2512562815
[2026-01-12 05:57:40] 2026-01-12 04:45:55,406 | INFO     | intersect: 29298169866.40365
[2026-01-12 05:57:40] 2026-01-12 04:45:55,407 | INFO     | chi2: 1.400678916431005
[2026-01-12 05:57:40] 2026-01-12 04:45:55,407 | INFO     | current chi2=1.400678916431005 (change=0.31874783857843286 %)
[2026-01-12 05:57:40] 2026-01-12 04:45:55,407 | INFO     | right removable region: 198
[2026-01-12 05:57:40] 2026-01-12 04:45:55,407 | INFO     | sum of square deviations: 2443580700.0
[2026-01-12 05:57:40] 2026-01-12 04:45:55,408 | INFO     | sum of deviations: -61496015460.99999
[2026-01-12 05:57:40] 2026-01-12 04:45:55,409 | INFO     | mean x: 1768187069.0
[2026-01-12 05:57:40] 2026-01-12 04:45:55,409 | INFO     | mean y: 2426907.341708543
[2026-01-12 05:57:40] 2026-01-12 04:45:55,409 | INFO     | intersect: 44501247565.55212
[2026-01-12 05:57:40] 2026-01-12 04:45:55,409 | INFO     | chi2: 0.21595640262735383
[2026-01-12 05:57:40] 2026-01-12 04:45:55,409 | INFO     | current chi2=0.21595640262735383 (change=84.63116394939246 %)
[2026-01-12 05:57:40] 2026-01-12 04:45:55,410 | INFO     | sum of square deviations: 2263977332.5
[2026-01-12 05:57:40] 2026-01-12 04:45:55,411 | INFO     | sum of deviations: -52395040002.00001
[2026-01-12 05:57:40] 2026-01-12 04:45:55,411 | INFO     | mean x: 1768187221.5
[2026-01-12 05:57:40] 2026-01-12 04:45:55,411 | INFO     | mean y: 2419173.7525773197
[2026-01-12 05:57:40] 2026-01-12 04:45:55,411 | INFO     | intersect: 40923429676.6339
[2026-01-12 05:57:40] 2026-01-12 04:45:55,411 | INFO     | chi2: 0.1961964360835014
[2026-01-12 05:57:40] 2026-01-12 04:45:55,412 | INFO     | current chi2=0.1961964360835014 (change=9.149979488197658 %)
[2026-01-12 05:57:40] 2026-01-12 04:45:55,412 | INFO     | left removable region: 20
[2026-01-12 05:57:40] 2026-01-12 04:45:55,412 | INFO     | sum of square deviations: 1748737904.5
[2026-01-12 05:57:40] 2026-01-12 04:45:55,413 | INFO     | sum of deviations: -31021474543.0
[2026-01-12 05:57:40] 2026-01-12 04:45:55,413 | INFO     | mean x: 1768187343.5
[2026-01-12 05:57:40] 2026-01-12 04:45:55,413 | INFO     | mean y: 2402130.112359551
[2026-01-12 05:57:40] 2026-01-12 04:45:55,413 | INFO     | intersect: 31368897087.699093
[2026-01-12 05:57:40] 2026-01-12 04:45:55,414 | INFO     | chi2: 0.10850556818362365
[2026-01-12 05:57:40] 2026-01-12 04:45:55,414 | INFO     | current memory leak: -17.74 B/s (using 178 data points, chi2=0.11)
[2026-01-12 05:57:40] 2026-01-12 04:45:55,414 | INFO     | could have reported an average CPU frequency of 2720 MHz (10 samples)
[2026-01-12 05:57:40] 2026-01-12 04:45:55,414 | INFO     | ..............................
[2026-01-12 05:57:40] 2026-01-12 04:45:55,414 | INFO     | . Timing measurements:
[2026-01-12 05:57:40] 2026-01-12 04:45:55,415 | INFO     | . get job = 0 s
[2026-01-12 05:57:40] 2026-01-12 04:45:55,415 | INFO     | . initial setup = 1 s
[2026-01-12 05:57:40] 2026-01-12 04:45:55,415 | INFO     | . payload setup = 8 s
[2026-01-12 05:57:40] 2026-01-12 04:45:55,415 | INFO     | . stage-in = 0 s
[2026-01-12 05:57:40] 2026-01-12 04:45:55,415 | INFO     | . payload execution = 12423 s
[2026-01-12 05:57:40] 2026-01-12 04:45:55,415 | INFO     | . stage-out = 1 s
[2026-01-12 05:57:40] 2026-01-12 04:45:55,415 | INFO     | . log creation = 0 s
[2026-01-12 05:57:40] 2026-01-12 04:45:55,415 | INFO     | ..............................
[2026-01-12 05:57:40] 2026-01-12 04:45:55,514 | INFO     | 
[2026-01-12 05:57:40] 2026-01-12 04:45:55,514 | INFO     | job summary report
[2026-01-12 05:57:40] 2026-01-12 04:45:55,514 | INFO     | --------------------------------------------------
[2026-01-12 05:57:40] 2026-01-12 04:45:55,514 | INFO     | PanDA job id: 6962918438
[2026-01-12 05:57:40] 2026-01-12 04:45:55,515 | INFO     | task id: 47898826
[2026-01-12 05:57:40] 2026-01-12 04:45:55,515 | INFO     | errors: (none)
[2026-01-12 05:57:40] 2026-01-12 04:45:55,515 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 05:57:40] 2026-01-12 04:45:55,515 | INFO     | pilot state: finished 
[2026-01-12 05:57:40] 2026-01-12 04:45:55,515 | INFO     | transexitcode: 0
[2026-01-12 05:57:40] 2026-01-12 04:45:55,515 | INFO     | exeerrorcode: 0
[2026-01-12 05:57:40] 2026-01-12 04:45:55,515 | INFO     | exeerrordiag: 
[2026-01-12 05:57:40] 2026-01-12 04:45:55,515 | INFO     | exitcode: 0
[2026-01-12 05:57:40] 2026-01-12 04:45:55,515 | INFO     | exitmsg: OK
[2026-01-12 05:57:40] 2026-01-12 04:45:55,515 | INFO     | cpuconsumptiontime: 47956 s
[2026-01-12 05:57:40] 2026-01-12 04:45:55,515 | INFO     | nevents: 400
[2026-01-12 05:57:40] 2026-01-12 04:45:55,515 | INFO     | neventsw: 0
[2026-01-12 05:57:40] 2026-01-12 04:45:55,515 | INFO     | pid: 1874662
[2026-01-12 05:57:40] 2026-01-12 04:45:55,516 | INFO     | pgrp: 1874662
[2026-01-12 05:57:40] 2026-01-12 04:45:55,516 | INFO     | corecount: 4
[2026-01-12 05:57:40] 2026-01-12 04:45:55,516 | INFO     | event service: False
[2026-01-12 05:57:40] 2026-01-12 04:45:55,516 | INFO     | sizes: {0: 2283981, 6: 2284243, 11: 2284271, 12435: 2314601, 12436: 2323623, 12438: 2323679, 12446: 2324001}
[2026-01-12 05:57:40] 2026-01-12 04:45:55,516 | INFO     | --------------------------------------------------
[2026-01-12 05:57:40] 2026-01-12 04:45:55,516 | INFO     | 
[2026-01-12 05:57:40] 2026-01-12 04:45:55,516 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2026-01-12 05:57:40] 2026-01-12 04:45:55,544 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 05:57:40] 2026-01-12 04:45:55,545 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 05:57:40] 2026-01-12 04:45:55,545 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 05:57:40] 2026-01-12 04:45:55,545 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 05:57:40] 2026-01-12 04:45:55,545 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 05:57:40] 2026-01-12 04:45:55,545 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 05:57:40] 2026-01-12 04:45:55,545 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 05:57:40] 2026-01-12 04:45:55,545 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 05:57:40] 2026-01-12 04:45:55,545 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 05:57:40] 2026-01-12 04:45:55,545 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 05:57:40] 2026-01-12 04:45:55,545 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 05:57:40] 2026-01-12 04:45:55,546 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 05:57:40] 2026-01-12 04:45:55,546 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 05:57:40] 2026-01-12 04:45:55,546 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 05:57:40] 2026-01-12 04:45:55,546 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 05:57:40] 2026-01-12 04:45:55,546 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 05:57:40] 2026-01-12 04:45:55,546 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 05:57:40] 2026-01-12 04:45:55,546 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 05:57:40] 2026-01-12 04:45:55,546 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 05:57:40] 2026-01-12 04:45:55,546 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 05:57:40] 2026-01-12 04:45:55,546 | INFO     | job 6962918438 has completed (purged errors)
[2026-01-12 05:57:40] 2026-01-12 04:45:55,546 | INFO     | overall cleanup function is called
[2026-01-12 05:57:40] 2026-01-12 04:45:56,555 | INFO     | --- collectZombieJob: --- 10, [1874662]
[2026-01-12 05:57:40] 2026-01-12 04:45:56,556 | INFO     | zombie collector waiting for pid 1874662
[2026-01-12 05:57:40] 2026-01-12 04:45:56,556 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 05:57:40] 2026-01-12 04:45:56,556 | INFO     | collected zombie processes
[2026-01-12 05:57:40] 2026-01-12 04:45:56,556 | INFO     | will attempt to kill all subprocesses of pid=1874662
[2026-01-12 05:57:40] 2026-01-12 04:45:57,235 | INFO     | process IDs to be killed: [1874662] (in reverse order)
[2026-01-12 05:57:40] 2026-01-12 04:45:57,469 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 05:57:40] 2026-01-12 04:45:57,470 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 05:57:40] 2026-01-12 04:45:57,503 | INFO     | did not find any defunct processes belonging to 1874662
[2026-01-12 05:57:40] 2026-01-12 04:45:57,533 | INFO     | did not find any defunct processes belonging to 1874662
[2026-01-12 05:57:40] 2026-01-12 04:45:57,534 | INFO     | ready for new job
[2026-01-12 05:57:40] 2026-01-12 04:45:57,534 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 05:57:40] 2026-01-12 04:45:57,536 | INFO     | ***************************************
[2026-01-12 05:57:40] 2026-01-12 04:45:57,537 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 05:57:40] 2026-01-12 04:45:57,537 | INFO     | ***************************************
[2026-01-12 05:57:40] 2026-01-12 04:45:57,537 | INFO     | 
[2026-01-12 05:57:40] 2026-01-12 04:45:57,545 | INFO     | architecture information:
[2026-01-12 05:57:40] 2026-01-12 04:45:57,545 | INFO     | executing command: cat /etc/os-release
[2026-01-12 05:57:40] 2026-01-12 04:45:57,573 | INFO     | cat /etc/os-release:
[2026-01-12 05:57:40] NAME="CentOS Linux"
[2026-01-12 05:57:40] VERSION="7 (Core)"
[2026-01-12 05:57:40] ID="centos"
[2026-01-12 05:57:40] ID_LIKE="rhel fedora"
[2026-01-12 05:57:40] VERSION_ID="7"
[2026-01-12 05:57:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 05:57:40] ANSI_COLOR="0;31"
[2026-01-12 05:57:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 05:57:40] HOME_URL="https://www.centos.org/"
[2026-01-12 05:57:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 05:57:40] 
[2026-01-12 05:57:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 05:57:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 05:57:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 05:57:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 05:57:40] 
[2026-01-12 05:57:40] 2026-01-12 04:45:57,574 | INFO     | ***************************************
[2026-01-12 05:57:40] 2026-01-12 04:45:58,075 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2026-01-12 05:57:40] 2026-01-12 04:45:58,100 | INFO     | sufficient remaining disk space (3359681544192 B)
[2026-01-12 05:57:40] 2026-01-12 04:45:58,101 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 05:57:40] 2026-01-12 04:45:58,101 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 05:57:40] 2026-01-12 04:45:58,101 | INFO     | update_server=False
[2026-01-12 05:57:40] 2026-01-12 04:45:58,101 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 05:57:40] 2026-01-12 04:45:58,292 | INFO     | all payload control threads have been joined
[2026-01-12 05:57:40] 2026-01-12 04:45:58,408 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 05:57:40] 2026-01-12 04:45:58,445 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-12 05:57:40] 2026-01-12 04:45:58,446 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-12 05:57:40] 2026-01-12 04:45:58,446 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 05:57:40] 2026-01-12 04:45:58,446 | INFO     | will abort loop
[2026-01-12 05:57:40] 2026-01-12 04:45:58,586 | INFO     | all data control threads have been joined
[2026-01-12 05:57:40] 2026-01-12 04:45:58,787 | INFO     | all job control threads have been joined
[2026-01-12 05:57:40] 2026-01-12 04:45:59,105 | INFO     | [job] retrieve thread has finished
[2026-01-12 05:57:40] 2026-01-12 04:45:59,158 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 05:57:40] 2026-01-12 04:45:59,297 | INFO     | [payload] control thread has finished
[2026-01-12 05:57:40] 2026-01-12 04:45:59,394 | INFO     | [payload] failed_post thread has finished
[2026-01-12 05:57:40] 2026-01-12 04:45:59,433 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 05:57:40] 2026-01-12 04:45:59,450 | INFO     | [job] job monitor thread has finished
[2026-01-12 05:57:40] 2026-01-12 04:45:59,477 | INFO     | [job] validate thread has finished
[2026-01-12 05:57:40] 2026-01-12 04:45:59,499 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 05:57:40] 2026-01-12 04:45:59,595 | INFO     | [data] control thread has finished
[2026-01-12 05:57:40] 2026-01-12 04:45:59,793 | INFO     | [job] control thread has finished
[2026-01-12 05:57:40] 2026-01-12 04:45:59,831 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 05:57:40] 2026-01-12 04:46:00,050 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 05:57:40] 2026-01-12 04:46:00,061 | INFO     | [data] copytool_in thread has finished
[2026-01-12 05:57:40] 2026-01-12 04:46:00,492 | INFO     | [payload] validate_post thread has finished
[2026-01-12 05:57:40] 2026-01-12 04:46:00,525 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 05:57:40] 2026-01-12 04:46:01,163 | INFO     | [data] copytool_out thread has finished
[2026-01-12 05:57:40] 2026-01-12 04:46:01,530 | INFO     | [job] queue monitor thread has finished
[2026-01-12 05:57:40] 2026-01-12 04:46:02,414 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 05:57:40] 2026-01-12 04:46:28,785 | INFO     | PID=1867201 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 05:57:40] 2026-01-12 04:46:28,785 | INFO     | .. there are 5 such processes running
[2026-01-12 05:57:40] 2026-01-12 04:46:28,785 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 05:57:40] 2026-01-12 04:46:28,785 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 05:57:40] 2026-01-12 04:46:28,785 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 05:57:40] 2026-01-12 04:46:31,248 | INFO     | [monitor] cgroup control has ended
[2026-01-12 05:57:40] 2026-01-12 04:46:32,254 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22458271827776)>', '<ExcThread(monitor, started 22458029532928)>']
[2026-01-12 05:57:40] 2026-01-12 04:46:32,806 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 05:57:40] 2026-01-12 04:46:32,806 | INFO     | [monitor] control thread has ended
[2026-01-12 05:57:40] 2026-01-12 04:46:37,280 | INFO     | all workflow threads have been joined
[2026-01-12 05:57:40] 2026-01-12 04:46:37,280 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 05:57:40] 2026-01-12 04:46:37,281 | INFO     | traces error code: 0
[2026-01-12 05:57:40] 2026-01-12 04:46:37,281 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 05:57:40] 2026-01-12 04:46:37,476 [wrapper] ==== pilot stdout END ====
[2026-01-12 05:57:40] 2026-01-12 04:46:37,480 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 05:57:40] 2026-01-12 04:46:37,487 [wrapper] pilotpid: 1867201
[2026-01-12 05:57:40] 2026-01-12 04:46:37,491 [wrapper] Pilot exit status: 0
[2026-01-12 05:57:40] 2026-01-12 04:46:37,507 [wrapper] pandaids: 6962918438
[2026-01-12 05:57:40] 2026-01-12 04:46:37,680 [wrapper] cleanup supervisor_pilot 2107186 1867202
[2026-01-12 05:57:40] 2026-01-12 04:46:37,685 [wrapper] Test setup, not cleaning
[2026-01-12 05:57:40] 2026-01-12 04:46:37,691 [wrapper] apfmon messages muted
[2026-01-12 05:57:40] 2026-01-12 04:46:37,695 [wrapper] ==== wrapper stdout END ====
[2026-01-12 05:57:40] 2026-01-12 04:46:37,699 [wrapper] ==== wrapper stderr END ====
[2026-01-12 05:57:40]  *** Error codes and diagnostics ***
[2026-01-12 05:57:40]     "exeErrorCode": 0,
[2026-01-12 05:57:40]     "exeErrorDiag": "",
[2026-01-12 05:57:40]     "pilotErrorCode": 0,
[2026-01-12 05:57:40]     "pilotErrorDiag": "",
[2026-01-12 05:57:40]  *** Listing of results directory ***
[2026-01-12 05:57:40] total 448696
[2026-01-12 05:57:40] -rw-r--r-- 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-12 05:57:40] -rwx------ 1 boinc boinc     36322 Jan  8 09:04 runpilot2-wrapper.sh
[2026-01-12 05:57:40] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:07 queuedata.json
[2026-01-12 05:57:40] -rw-r--r-- 1 boinc boinc       100 Jan 12 02:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 05:57:40] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 02:17 run_atlas
[2026-01-12 05:57:40] -rw-r--r-- 1 boinc boinc       105 Jan 12 02:17 job.xml
[2026-01-12 05:57:40] -rw-r--r-- 1 boinc boinc      6692 Jan 12 02:17 init_data.xml
[2026-01-12 05:57:40] -rw-r--r-- 2 boinc boinc 224082978 Jan 12 02:17 EVNT.47898824._000795.pool.root.1
[2026-01-12 05:57:40] -rw-r--r-- 2 boinc boinc     15847 Jan 12 02:17 start_atlas.sh
[2026-01-12 05:57:40] drwxrwx--x 2 boinc boinc      4096 Jan 12 02:17 shared
[2026-01-12 05:57:40] -rw-r--r-- 2 boinc boinc    592402 Jan 12 02:17 input.tar.gz
[2026-01-12 05:57:40] -rw-r--r-- 1 boinc boinc         0 Jan 12 02:17 boinc_lockfile
[2026-01-12 05:57:40] -rw-r--r-- 1 boinc boinc      2519 Jan 12 02:17 pandaJob.out
[2026-01-12 05:57:40] -rw------- 1 boinc boinc    990074 Jan 12 02:18 agis_schedconf.cvmfs.json
[2026-01-12 05:57:40] drwx------ 5 boinc boinc      4096 Jan 12 02:18 pilot3
[2026-01-12 05:57:40] -rw------- 1 boinc boinc 227246304 Jan 12 05:45 HITS.47898826._020486.pool.root.1
[2026-01-12 05:57:40] -rw-r--r-- 1 boinc boinc       529 Jan 12 05:45 boinc_task_state.xml
[2026-01-12 05:57:40] -rw------- 1 boinc boinc        95 Jan 12 05:45 pilot_heartbeat.json
[2026-01-12 05:57:40] -rw------- 1 boinc boinc      1027 Jan 12 05:45 memory_monitor_summary.json
[2026-01-12 05:57:40] -rw------- 1 boinc boinc   1516240 Jan 12 05:45 agis_ddmendpoints.agis.ALL.json
[2026-01-12 05:57:40] -rw------- 1 boinc boinc    373437 Jan 12 05:45 log.47898826._020486.job.log.tgz.1
[2026-01-12 05:57:40] -rw------- 1 boinc boinc      7789 Jan 12 05:45 heartbeat.json
[2026-01-12 05:57:40] -rw------- 1 boinc boinc      5021 Jan 12 05:46 pilotlog.txt
[2026-01-12 05:57:40] -rw------- 1 boinc boinc   1736154 Jan 12 05:46 log.47898826._020486.job.log.1
[2026-01-12 05:57:40] -rw------- 1 boinc boinc       357 Jan 12 05:46 output.list
[2026-01-12 05:57:40] -rw-r--r-- 1 boinc boinc       620 Jan 12 05:46 runtime_log
[2026-01-12 05:57:40] -rw------- 1 boinc boinc   2129920 Jan 12 05:46 result.tar.gz
[2026-01-12 05:57:40] -rw-r--r-- 1 boinc boinc      9223 Jan 12 05:46 runtime_log.err
[2026-01-12 05:57:40] -rw------- 1 boinc boinc       666 Jan 12 05:46 TcJODmYB0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDXeKDmpaysTm.diag
[2026-01-12 05:57:40] -rw-r--r-- 1 boinc boinc        26 Jan 12 05:57 wrapper_checkpoint.txt
[2026-01-12 05:57:40] -rw-r--r-- 1 boinc boinc      8192 Jan 12 05:57 boinc_mmap_file
[2026-01-12 05:57:40] -rw-r--r-- 1 boinc boinc     21096 Jan 12 05:57 stderr.txt
[2026-01-12 05:57:40] HITS file was successfully produced:
[2026-01-12 05:57:40] -rw------- 1 boinc boinc 227246304 Jan 12 05:45 shared/HITS.pool.root.1
[2026-01-12 05:57:40]  *** Contents of shared directory: ***
[2026-01-12 05:57:40] total 443440
[2026-01-12 05:57:40] -rw-r--r-- 2 boinc boinc 224082978 Jan 12 02:17 ATLAS.root_0
[2026-01-12 05:57:40] -rw-r--r-- 2 boinc boinc     15847 Jan 12 02:17 start_atlas.sh
[2026-01-12 05:57:40] -rw-r--r-- 2 boinc boinc    592402 Jan 12 02:17 input.tar.gz
[2026-01-12 05:57:40] -rw------- 1 boinc boinc 227246304 Jan 12 05:45 HITS.pool.root.1
[2026-01-12 05:57:40] -rw------- 1 boinc boinc   2129920 Jan 12 05:46 result.tar.gz
05:57:41 (1863094): run_atlas exited; CPU time 48736.347753
05:57:41 (1863094): called boinc_finish(0)

</stderr_txt>
]]>

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