Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:28:23 (2315493): wrapper (7.7.26015): starting
05:28:23 (2315493): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 05:28:23] Arguments: --nthreads 8
[2026-01-08 05:28:23] Threads: 8
[2026-01-08 05:28:23] Checking for CVMFS
[2026-01-08 05:28:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 05:28:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 05:28:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 05:28:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 05:28:25] 2.13.3.0 12755 91843 380204 154901 2 57 27413198 40960000 11908 16776704 0 125584796 99.593 147813464 11797 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 05:28:25] CVMFS is ok
[2026-01-08 05:28:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 05:28:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 05:28:25] Further information can be found at the LHC@home message board.
[2026-01-08 05:28:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 05:28:25] Checking for apptainer binary...
[2026-01-08 05:28:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 05:28:25] Running /usr/bin/apptainer --version
[2026-01-08 05:28:25] apptainer version 1.4.5-2.el9
[2026-01-08 05:28:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 05:28:26] c7-10-13.aglt2.org
[2026-01-08 05:28:26] apptainer works
[2026-01-08 05:28:26] Set ATHENA_PROC_NUMBER=8
[2026-01-08 05:28:26] Set ATHENA_CORE_NUMBER=8
[2026-01-08 05:28:26] Starting ATLAS job with PandaID=6962917908
[2026-01-08 05:28:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:40:46]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:40:46] 2026-01-09 17:40:03,131 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:40:46] 2026-01-09 17:40:03,131 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:40:46] 2026-01-09 17:40:03,213 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:40:46] 2026-01-09 17:40:03,220 | INFO     | sum of square deviations: 1925289882293.0994
[2026-01-09 12:40:46] 2026-01-09 17:40:04,464 | INFO     | time since job start (112259s) is within the limit (174528.0s)
[2026-01-09 12:40:46] 2026-01-09 17:40:04,499 | INFO     | sum of deviations: 698175806578.524
[2026-01-09 12:40:46] 2026-01-09 17:40:04,500 | INFO     | mean x: 1767924259.8933623
[2026-01-09 12:40:46] 2026-01-09 17:40:04,500 | INFO     | mean y: 2513996.395538629
[2026-01-09 12:40:46] 2026-01-09 17:40:04,500 | INFO     | intersect: -638595665.8287598
[2026-01-09 12:40:46] 2026-01-09 17:40:04,506 | INFO     | chi2: 3.6463596672808327
[2026-01-09 12:40:46] 2026-01-09 17:40:04,544 | INFO     | sum of square deviations: 1909620201766.659
[2026-01-09 12:40:46] 2026-01-09 17:40:05,481 | INFO     | monitor loop #5997: job 0:6962917908 is in state 'finished'
[2026-01-09 12:40:46] 2026-01-09 17:40:05,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:40:46] 2026-01-09 17:40:05,822 | INFO     | sum of deviations: 929557651342.3741
[2026-01-09 12:40:46] 2026-01-09 17:40:05,822 | INFO     | mean x: 1767924107.3966177
[2026-01-09 12:40:46] 2026-01-09 17:40:05,823 | INFO     | mean y: 2516244.447899618
[2026-01-09 12:40:46] 2026-01-09 17:40:05,823 | INFO     | intersect: -858067121.5548301
[2026-01-09 12:40:46] 2026-01-09 17:40:05,829 | INFO     | chi2: 2.259388659792274
[2026-01-09 12:40:46] 2026-01-09 17:40:05,829 | INFO     | current chi2=2.259388659792274 (change=38.037142082663834 %)
[2026-01-09 12:40:46] 2026-01-09 17:40:05,835 | INFO     | sum of square deviations: 1894035778774.681
[2026-01-09 12:40:46] 2026-01-09 17:40:06,552 | INFO     | time since job start (112261s) is within the limit (174528.0s)
[2026-01-09 12:40:46] 2026-01-09 17:40:07,190 | INFO     | sum of deviations: 921490704227.7991
[2026-01-09 12:40:46] 2026-01-09 17:40:07,190 | INFO     | mean x: 1767923954.8998907
[2026-01-09 12:40:46] 2026-01-09 17:40:07,191 | INFO     | mean y: 2516165.4852297595
[2026-01-09 12:40:46] 2026-01-09 17:40:07,191 | INFO     | intersect: -857618320.0817933
[2026-01-09 12:40:46] 2026-01-09 17:40:07,197 | INFO     | chi2: 2.2593336538629436
[2026-01-09 12:40:46] 2026-01-09 17:40:07,197 | INFO     | current chi2=2.2593336538629436 (change=0.002434549234904786 %)
[2026-01-09 12:40:46] 2026-01-09 17:40:07,197 | INFO     | right removable region: 1827
[2026-01-09 12:40:46] 2026-01-09 17:40:07,203 | INFO     | sum of square deviations: 1909618751550.864
[2026-01-09 12:40:46] 2026-01-09 17:40:07,598 | INFO     | sum of deviations: 303106597684.3471
[2026-01-09 12:40:46] 2026-01-09 17:40:07,599 | INFO     | mean x: 1767924412.3971632
[2026-01-09 12:40:46] 2026-01-09 17:40:07,599 | INFO     | mean y: 2517838.0283687944
[2026-01-09 12:40:46] 2026-01-09 17:40:07,603 | INFO     | intersect: -278098150.46127367
[2026-01-09 12:40:46] 2026-01-09 17:40:07,666 | INFO     | chi2: 1.670354209888493
[2026-01-09 12:40:46] 2026-01-09 17:40:07,666 | INFO     | current chi2=1.670354209888493 (change=54.191183473293755 %)
[2026-01-09 12:40:46] 2026-01-09 17:40:07,697 | INFO     | sum of square deviations: 1894032878221.0784
[2026-01-09 12:40:46] 2026-01-09 17:40:08,031 | INFO     | monitor loop #5998: job 0:6962917908 is in state 'finished'
[2026-01-09 12:40:46] 2026-01-09 17:40:08,031 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:40:46] 2026-01-09 17:40:08,292 | INFO     | sum of deviations: 227484105761.62842
[2026-01-09 12:40:46] 2026-01-09 17:40:08,293 | INFO     | mean x: 1767924564.9009848
[2026-01-09 12:40:46] 2026-01-09 17:40:08,310 | INFO     | mean y: 2518577.5393873085
[2026-01-09 12:40:46] 2026-01-09 17:40:08,310 | INFO     | intersect: -209819203.56515655
[2026-01-09 12:40:46] 2026-01-09 17:40:08,390 | INFO     | chi2: 1.6074077135937421
[2026-01-09 12:40:46] 2026-01-09 17:40:08,390 | INFO     | current chi2=1.6074077135937421 (change=3.7684519799517786 %)
[2026-01-09 12:40:46] 2026-01-09 17:40:08,390 | INFO     | left removable region: 20
[2026-01-09 12:40:46] 2026-01-09 17:40:08,457 | INFO     | sum of square deviations: 1829501519992.1938
[2026-01-09 12:40:46] 2026-01-09 17:40:09,286 | INFO     | sum of deviations: 543373933076.21204
[2026-01-09 12:40:46] 2026-01-09 17:40:09,287 | INFO     | mean x: 1767924534.4133923
[2026-01-09 12:40:46] 2026-01-09 17:40:09,287 | INFO     | mean y: 2519837.387935805
[2026-01-09 12:40:46] 2026-01-09 17:40:09,287 | INFO     | intersect: -522565327.69584876
[2026-01-09 12:40:46] 2026-01-09 17:40:09,293 | INFO     | chi2: 0.12905624358341378
[2026-01-09 12:40:46] 2026-01-09 17:40:09,294 | INFO     | current memory leak: 0.30 B/s (using 1807 data points, chi2=0.13)
[2026-01-09 12:40:46] 2026-01-09 17:40:09,298 | INFO     | could have reported an average CPU frequency of 3291 MHz (64 samples)
[2026-01-09 12:40:46] 2026-01-09 17:40:09,298 | INFO     | ..............................
[2026-01-09 12:40:46] 2026-01-09 17:40:09,298 | INFO     | . Timing measurements:
[2026-01-09 12:40:46] 2026-01-09 17:40:09,298 | INFO     | . get job = 0 s
[2026-01-09 12:40:46] 2026-01-09 17:40:09,299 | INFO     | . initial setup = 4 s
[2026-01-09 12:40:46] 2026-01-09 17:40:09,299 | INFO     | . payload setup = 25 s
[2026-01-09 12:40:46] 2026-01-09 17:40:09,299 | INFO     | . stage-in = 0 s
[2026-01-09 12:40:46] 2026-01-09 17:40:09,299 | INFO     | . payload execution = 112124 s
[2026-01-09 12:40:46] 2026-01-09 17:40:09,299 | INFO     | . stage-out = 7 s
[2026-01-09 12:40:46] 2026-01-09 17:40:09,299 | INFO     | . log creation = 1 s
[2026-01-09 12:40:46] 2026-01-09 17:40:09,299 | INFO     | ..............................
[2026-01-09 12:40:46] 2026-01-09 17:40:09,828 | INFO     | PID=2320318 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-09 12:40:46] 2026-01-09 17:40:09,850 | INFO     | .. there are 11 such processes running
[2026-01-09 12:40:46] 2026-01-09 17:40:09,995 | INFO     | 
[2026-01-09 12:40:46] 2026-01-09 17:40:09,995 | INFO     | job summary report
[2026-01-09 12:40:46] 2026-01-09 17:40:09,995 | INFO     | --------------------------------------------------
[2026-01-09 12:40:46] 2026-01-09 17:40:09,995 | INFO     | PanDA job id: 6962917908
[2026-01-09 12:40:46] 2026-01-09 17:40:09,996 | INFO     | task id: 47898826
[2026-01-09 12:40:46] 2026-01-09 17:40:09,996 | INFO     | errors: (none)
[2026-01-09 12:40:46] 2026-01-09 17:40:09,996 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:40:46] 2026-01-09 17:40:09,996 | INFO     | pilot state: finished 
[2026-01-09 12:40:46] 2026-01-09 17:40:09,996 | INFO     | transexitcode: 0
[2026-01-09 12:40:46] 2026-01-09 17:40:09,996 | INFO     | exeerrorcode: 0
[2026-01-09 12:40:46] 2026-01-09 17:40:09,997 | INFO     | exeerrordiag: 
[2026-01-09 12:40:46] 2026-01-09 17:40:09,997 | INFO     | exitcode: 0
[2026-01-09 12:40:46] 2026-01-09 17:40:09,997 | INFO     | exitmsg: OK
[2026-01-09 12:40:46] 2026-01-09 17:40:09,997 | INFO     | cpuconsumptiontime: 144096 s
[2026-01-09 12:40:46] 2026-01-09 17:40:09,997 | INFO     | nevents: 400
[2026-01-09 12:40:46] 2026-01-09 17:40:09,997 | INFO     | neventsw: 0
[2026-01-09 12:40:46] 2026-01-09 17:40:09,997 | INFO     | pid: 2330255
[2026-01-09 12:40:46] 2026-01-09 17:40:09,998 | INFO     | pgrp: 2330255
[2026-01-09 12:40:46] 2026-01-09 17:40:09,998 | INFO     | corecount: 8
[2026-01-09 12:40:46] 2026-01-09 17:40:09,998 | INFO     | event service: False
[2026-01-09 12:40:46] 2026-01-09 17:40:09,998 | INFO     | sizes: {0: 2283141, 1: 2283826, 2: 2284025, 3: 2284025, 14: 2284053, 21: 2284343, 25: 2284499, 112157: 2358577, 112159: 2358576, 112168: 2367630, 112172: 2367686, 
[2026-01-09 12:40:46] 2026-01-09 17:40:09,998 | INFO     | --------------------------------------------------
[2026-01-09 12:40:46] 2026-01-09 17:40:09,998 | INFO     | 
[2026-01-09 12:40:46] 2026-01-09 17:40:09,999 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 12:40:46] 2026-01-09 17:40:10,692 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:40:46] 2026-01-09 17:40:10,693 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:40:46] 2026-01-09 17:40:10,693 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:40:46] 2026-01-09 17:40:10,693 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:40:46] 2026-01-09 17:40:10,693 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:40:46] 2026-01-09 17:40:10,694 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:40:46] 2026-01-09 17:40:10,694 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:40:46] 2026-01-09 17:40:10,694 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:40:46] 2026-01-09 17:40:10,694 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:40:46] 2026-01-09 17:40:10,694 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:40:46] 2026-01-09 17:40:10,694 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:40:46] 2026-01-09 17:40:10,695 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:40:46] 2026-01-09 17:40:10,695 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:40:46] 2026-01-09 17:40:10,695 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:40:46] 2026-01-09 17:40:10,695 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:40:46] 2026-01-09 17:40:10,695 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:40:46] 2026-01-09 17:40:10,695 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:40:46] 2026-01-09 17:40:10,696 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:40:46] 2026-01-09 17:40:10,696 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:40:46] 2026-01-09 17:40:10,727 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:40:46] 2026-01-09 17:40:10,728 | INFO     | job 6962917908 has completed (purged errors)
[2026-01-09 12:40:46] 2026-01-09 17:40:10,728 | INFO     | overall cleanup function is called
[2026-01-09 12:40:46] 2026-01-09 17:40:11,800 | INFO     | --- collectZombieJob: --- 10, [2330255]
[2026-01-09 12:40:46] 2026-01-09 17:40:11,800 | INFO     | zombie collector waiting for pid 2330255
[2026-01-09 12:40:46] 2026-01-09 17:40:11,800 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:40:46] 2026-01-09 17:40:11,801 | INFO     | collected zombie processes
[2026-01-09 12:40:46] 2026-01-09 17:40:11,801 | INFO     | will attempt to kill all subprocesses of pid=2330255
[2026-01-09 12:40:46] 2026-01-09 17:40:12,882 | INFO     | process IDs to be killed: [2330255] (in reverse order)
[2026-01-09 12:40:46] 2026-01-09 17:40:13,205 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:40:46] 2026-01-09 17:40:13,206 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:40:46] 2026-01-09 17:40:13,331 | INFO     | did not find any defunct processes belonging to 2330255
[2026-01-09 12:40:46] 2026-01-09 17:40:13,452 | INFO     | did not find any defunct processes belonging to 2330255
[2026-01-09 12:40:46] 2026-01-09 17:40:13,453 | INFO     | ready for new job
[2026-01-09 12:40:46] 2026-01-09 17:40:13,453 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:40:46] 2026-01-09 17:40:13,522 | INFO     | ***************************************
[2026-01-09 12:40:46] 2026-01-09 17:40:13,522 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:40:46] 2026-01-09 17:40:13,522 | INFO     | ***************************************
[2026-01-09 12:40:46] 2026-01-09 17:40:13,522 | INFO     | 
[2026-01-09 12:40:46] 2026-01-09 17:40:13,598 | INFO     | architecture information:
[2026-01-09 12:40:46] 2026-01-09 17:40:13,618 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:40:46] 2026-01-09 17:40:13,867 | INFO     | cat /etc/os-release:
[2026-01-09 12:40:46] NAME="CentOS Linux"
[2026-01-09 12:40:46] VERSION="7 (Core)"
[2026-01-09 12:40:46] ID="centos"
[2026-01-09 12:40:46] ID_LIKE="rhel fedora"
[2026-01-09 12:40:46] VERSION_ID="7"
[2026-01-09 12:40:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:40:46] ANSI_COLOR="0;31"
[2026-01-09 12:40:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:40:46] HOME_URL="https://www.centos.org/"
[2026-01-09 12:40:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:40:46] 
[2026-01-09 12:40:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:40:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:40:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:40:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:40:46] 
[2026-01-09 12:40:46] 2026-01-09 17:40:13,867 | INFO     | ***************************************
[2026-01-09 12:40:46] 2026-01-09 17:40:14,371 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 12:40:46] 2026-01-09 17:40:14,475 | INFO     | sufficient remaining disk space (84831895552 B)
[2026-01-09 12:40:46] 2026-01-09 17:40:14,476 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:40:46] 2026-01-09 17:40:14,476 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:40:46] 2026-01-09 17:40:14,476 | INFO     | update_server=False
[2026-01-09 12:40:46] 2026-01-09 17:40:14,476 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:40:46] 2026-01-09 17:40:14,477 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:40:46] 2026-01-09 17:40:14,500 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:40:46] 2026-01-09 17:40:14,501 | INFO     | aborting loop
[2026-01-09 12:40:46] 2026-01-09 17:40:14,705 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:40:46] 2026-01-09 17:40:14,896 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:40:46] 2026-01-09 17:40:15,241 | INFO     | all data control threads have been joined
[2026-01-09 12:40:46] 2026-01-09 17:40:15,482 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:40:46] 2026-01-09 17:40:15,519 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:40:46] 2026-01-09 17:40:15,528 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:40:46] 2026-01-09 17:40:15,656 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:40:46] 2026-01-09 17:40:15,711 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:40:46] 2026-01-09 17:40:15,737 | INFO     | all job control threads have been joined
[2026-01-09 12:40:46] 2026-01-09 17:40:15,926 | INFO     | all payload control threads have been joined
[2026-01-09 12:40:46] 2026-01-09 17:40:16,247 | INFO     | [data] control thread has finished
[2026-01-09 12:40:46] 2026-01-09 17:40:16,660 | INFO     | [job] validate thread has finished
[2026-01-09 12:40:46] 2026-01-09 17:40:16,712 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:40:46] 2026-01-09 17:40:16,735 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:40:46] 2026-01-09 17:40:16,744 | INFO     | [job] control thread has finished
[2026-01-09 12:40:46] 2026-01-09 17:40:16,805 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:40:46] 2026-01-09 17:40:16,813 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:40:46] 2026-01-09 17:40:16,816 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:40:46] 2026-01-09 17:40:16,932 | INFO     | [payload] control thread has finished
[2026-01-09 12:40:46] 2026-01-09 17:40:16,942 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:40:46] 2026-01-09 17:40:18,514 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:40:46] 2026-01-09 17:40:24,557 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:40:46] 2026-01-09 17:40:25,901 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139975608747840)>', '<ExcThread(monitor, started 139974972262144)>']
[2026-01-09 12:40:46] 2026-01-09 17:40:30,927 | INFO     | all workflow threads have been joined
[2026-01-09 12:40:46] 2026-01-09 17:40:30,927 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:40:46] 2026-01-09 17:40:30,928 | INFO     | traces error code: 0
[2026-01-09 12:40:46] 2026-01-09 17:40:30,928 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:40:46] 2026-01-09 17:40:44,013 | INFO     | PID=2320318 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 12:40:46] 2026-01-09 17:40:44,014 | INFO     | .. there are 11 such processes running
[2026-01-09 12:40:46] 2026-01-09 17:40:44,014 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:40:46] 2026-01-09 17:40:44,014 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:40:46] 2026-01-09 17:40:44,015 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:40:46] 2026-01-09 17:40:44,015 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:40:46] 2026-01-09 17:40:44,015 | INFO     | [monitor] control thread has ended
[2026-01-09 12:40:46] 2026-01-09 17:40:44,422 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:40:46] 2026-01-09 17:40:44,465 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:40:46] 2026-01-09 17:40:44,502 [wrapper] pilotpid: 2320318
[2026-01-09 12:40:46] 2026-01-09 17:40:44,581 [wrapper] Pilot exit status: 0
[2026-01-09 12:40:46] 2026-01-09 17:40:44,835 [wrapper] pandaids: 6962917908
[2026-01-09 12:40:46] 2026-01-09 17:40:45,636 [wrapper] cleanup supervisor_pilot  733738 2320319
[2026-01-09 12:40:46] 2026-01-09 17:40:45,647 [wrapper] Test setup, not cleaning
[2026-01-09 12:40:46] 2026-01-09 17:40:45,672 [wrapper] apfmon messages muted
[2026-01-09 12:40:46] 2026-01-09 17:40:45,677 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:40:46] 2026-01-09 17:40:45,688 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:40:46]  *** Error codes and diagnostics ***
[2026-01-09 12:40:46]     "exeErrorCode": 0,
[2026-01-09 12:40:46]     "exeErrorDiag": "",
[2026-01-09 12:40:46]     "pilotErrorCode": 0,
[2026-01-09 12:40:46]     "pilotErrorDiag": "",
[2026-01-09 12:40:46]  *** Listing of results directory ***
[2026-01-09 12:40:46] total 467164
[2026-01-09 12:40:46] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-09 12:40:46] -rwx------. 1 boincer umatlas     36322 Jan  8 03:04 runpilot2-wrapper.sh
[2026-01-09 12:40:46] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:07 queuedata.json
[2026-01-09 12:40:46] -rw-r--r--. 1 boincer umatlas       100 Jan  8 05:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:40:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 05:28 run_atlas
[2026-01-09 12:40:46] -rw-r--r--. 1 boincer umatlas       105 Jan  8 05:28 job.xml
[2026-01-09 12:40:46] -rw-r--r--. 2 boincer umatlas 226878077 Jan  8 05:28 EVNT.47898824._000662.pool.root.1
[2026-01-09 12:40:46] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 05:28 shared
[2026-01-09 12:40:46] -rw-r--r--. 2 boincer umatlas    592393 Jan  8 05:28 input.tar.gz
[2026-01-09 12:40:46] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 05:28 start_atlas.sh
[2026-01-09 12:40:46] -rw-r--r--. 1 boincer umatlas         0 Jan  8 05:28 boinc_lockfile
[2026-01-09 12:40:46] -rw-r--r--. 1 boincer umatlas      2519 Jan  8 05:28 pandaJob.out
[2026-01-09 12:40:46] -rw-------. 1 boincer umatlas        57 Jan  8 05:28 setup.sh.local
[2026-01-09 12:40:46] -rw-------. 1 boincer umatlas    989835 Jan  8 05:29 agis_schedconf.cvmfs.json
[2026-01-09 12:40:46] drwx------. 5 boincer umatlas      4096 Jan  8 05:29 pilot3
[2026-01-09 12:40:46] -rw-------. 1 boincer umatlas 218273490 Jan  9 12:36 HITS.47898826._019988.pool.root.1
[2026-01-09 12:40:46] -rw-r--r--. 1 boincer umatlas       533 Jan  9 12:36 boinc_task_state.xml
[2026-01-09 12:40:46] -rw-------. 1 boincer umatlas      1031 Jan  9 12:38 memory_monitor_summary.json
[2026-01-09 12:40:46] -rw-------. 1 boincer umatlas   1516240 Jan  9 12:39 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:40:46] -rw-------. 1 boincer umatlas   1623264 Jan  9 12:39 log.47898826._019988.job.log.tgz.1
[2026-01-09 12:40:46] -rw-r--r--. 1 boincer umatlas      6903 Jan  9 12:39 init_data.xml
[2026-01-09 12:40:46] -rw-------. 1 boincer umatlas        95 Jan  9 12:40 pilot_heartbeat.json
[2026-01-09 12:40:46] -rw-------. 1 boincer umatlas      7783 Jan  9 12:40 heartbeat.json
[2026-01-09 12:40:46] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 12:40 boinc_mmap_file
[2026-01-09 12:40:46] -rw-r--r--. 1 boincer umatlas        30 Jan  9 12:40 wrapper_checkpoint.txt
[2026-01-09 12:40:46] -rw-------. 1 boincer umatlas       823 Jan  9 12:40 pilotlog.txt
[2026-01-09 12:40:46] -rw-------. 1 boincer umatlas  13029031 Jan  9 12:40 log.47898826._019988.job.log.1
[2026-01-09 12:40:46] -rw-------. 1 boincer umatlas       357 Jan  9 12:40 output.list
[2026-01-09 12:40:46] -rw-r--r--. 1 boincer umatlas       620 Jan  9 12:40 runtime_log
[2026-01-09 12:40:46] -rw-------. 1 boincer umatlas  14673920 Jan  9 12:40 result.tar.gz
[2026-01-09 12:40:46] -rw-r--r--. 1 boincer umatlas      9344 Jan  9 12:40 runtime_log.err
[2026-01-09 12:40:46] -rw-------. 1 boincer umatlas       662 Jan  9 12:40 NIGKDmCB0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJVeKDmXfTHKn.diag
[2026-01-09 12:40:46] -rw-r--r--. 1 boincer umatlas     21374 Jan  9 12:40 stderr.txt
[2026-01-09 12:40:46] HITS file was successfully produced:
[2026-01-09 12:40:46] -rw-------. 1 boincer umatlas 218273490 Jan  9 12:36 shared/HITS.pool.root.1
[2026-01-09 12:40:46]  *** Contents of shared directory: ***
[2026-01-09 12:40:46] total 449660
[2026-01-09 12:40:46] -rw-r--r--. 2 boincer umatlas 226878077 Jan  8 05:28 ATLAS.root_0
[2026-01-09 12:40:46] -rw-r--r--. 2 boincer umatlas    592393 Jan  8 05:28 input.tar.gz
[2026-01-09 12:40:46] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 05:28 start_atlas.sh
[2026-01-09 12:40:46] -rw-------. 1 boincer umatlas 218273490 Jan  9 12:36 HITS.pool.root.1
[2026-01-09 12:40:46] -rw-------. 1 boincer umatlas  14673920 Jan  9 12:40 result.tar.gz
12:40:48 (2315493): run_atlas exited; CPU time 149651.186086
12:40:48 (2315493): called boinc_finish(0)

</stderr_txt>
]]>

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