Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:59:03 (26211): wrapper (7.7.26015): starting
16:59:03 (26211): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 16:59:03] Arguments: --nthreads 8
[2026-01-08 16:59:03] Threads: 8
[2026-01-08 16:59:03] Checking for CVMFS
[2026-01-08 16:59:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 16:59:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 16:59:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 16:59:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 16:59:06] 2.11.2.0 25311 34184 99680 154912 3 61 17033294 25165825 96 130560 0 13504028 99.718 11383781 2848 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 16:59:06] CVMFS is ok
[2026-01-08 16:59:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 16:59:06] Checking for apptainer binary...
[2026-01-08 16:59:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 16:59:06] Running /usr/bin/apptainer --version
[2026-01-08 16:59:06] apptainer version 1.3.2-1.el7
[2026-01-08 16:59:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 16:59:16] cg-vwn420.simple-grid.lan
[2026-01-08 16:59:16] apptainer works
[2026-01-08 16:59:16] Set ATHENA_PROC_NUMBER=8
[2026-01-08 16:59:16] Set ATHENA_CORE_NUMBER=8
[2026-01-08 16:59:16] Starting ATLAS job with PandaID=6962917903
[2026-01-08 16:59:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 23:17:14]  *** The last 200 lines of the pilot log: ***
[2026-01-08 23:17:14] 2026-01-08 22:16:07,720 | INFO     | time since job start (22362s) is within the limit (174528.0s)
[2026-01-08 23:17:14] 2026-01-08 22:16:07,729 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 23:17:14] 2026-01-08 22:16:07,731 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 23:17:14] 2026-01-08 22:16:07,732 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6962917903/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 23:17:14] 2026-01-08 22:16:07,733 | INFO     | extracted standard info from prmon json
[2026-01-08 23:17:14] 2026-01-08 22:16:07,733 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 23:17:14] 2026-01-08 22:16:07,733 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 23:17:14] 2026-01-08 22:16:07,734 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 23:17:14] 2026-01-08 22:16:07,734 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 23:17:14] 2026-01-08 22:16:07,747 | INFO     | fitting pss+swap vs Time
[2026-01-08 23:17:14] 2026-01-08 22:16:07,748 | INFO     | sum of square deviations: 13990234405.0
[2026-01-08 23:17:14] 2026-01-08 22:16:07,752 | INFO     | sum of deviations: 97929906910.0
[2026-01-08 23:17:14] 2026-01-08 22:16:07,752 | INFO     | mean x: 1767899588.5
[2026-01-08 23:17:14] 2026-01-08 22:16:07,752 | INFO     | mean y: 2472177.3764044945
[2026-01-08 23:17:14] 2026-01-08 22:16:07,752 | INFO     | intersect: -12372605831.76381
[2026-01-08 23:17:14] 2026-01-08 22:16:07,753 | INFO     | chi2: 8.6197602454689
[2026-01-08 23:17:14] 2026-01-08 22:16:07,754 | INFO     | sum of square deviations: 13408995600.0
[2026-01-08 23:17:14] 2026-01-08 22:16:07,758 | INFO     | sum of deviations: 120130183775.00002
[2026-01-08 23:17:14] 2026-01-08 22:16:07,758 | INFO     | mean x: 1767899436.0
[2026-01-08 23:17:14] 2026-01-08 22:16:07,758 | INFO     | mean y: 2477932.0484330487
[2026-01-08 23:17:14] 2026-01-08 22:16:07,758 | INFO     | intersect: -15836000241.693295
[2026-01-08 23:17:14] 2026-01-08 22:16:07,759 | INFO     | chi2: 7.90920835986473
[2026-01-08 23:17:14] 2026-01-08 22:16:07,759 | INFO     | current chi2=7.90920835986473 (change=8.24329059474342 %)
[2026-01-08 23:17:14] 2026-01-08 22:16:07,759 | INFO     | right removable region: 350
[2026-01-08 23:17:14] 2026-01-08 22:16:07,760 | INFO     | sum of square deviations: 13408995600.0
[2026-01-08 23:17:14] 2026-01-08 22:16:07,764 | INFO     | sum of deviations: -29018645744.000023
[2026-01-08 23:17:14] 2026-01-08 22:16:07,764 | INFO     | mean x: 1767899741.0
[2026-01-08 23:17:14] 2026-01-08 22:16:07,764 | INFO     | mean y: 2505471.2706552707
[2026-01-08 23:17:14] 2026-01-08 22:16:07,777 | INFO     | intersect: 3828448727.974266
[2026-01-08 23:17:14] 2026-01-08 22:16:07,777 | INFO     | chi2: 3.6335695107068315
[2026-01-08 23:17:14] 2026-01-08 22:16:07,778 | INFO     | current chi2=3.6335695107068315 (change=57.846048994032415 %)
[2026-01-08 23:17:14] 2026-01-08 22:16:07,778 | INFO     | sum of square deviations: 12844082682.5
[2026-01-08 23:17:14] 2026-01-08 22:16:07,782 | INFO     | sum of deviations: -118677526358.99997
[2026-01-08 23:17:14] 2026-01-08 22:16:07,783 | INFO     | mean x: 1767899893.5
[2026-01-08 23:17:14] 2026-01-08 22:16:07,783 | INFO     | mean y: 2529641.2832369944
[2026-01-08 23:17:14] 2026-01-08 22:16:07,783 | INFO     | intersect: 16337677226.153942
[2026-01-08 23:17:14] 2026-01-08 22:16:07,783 | INFO     | chi2: 1.182197380589633
[2026-01-08 23:17:14] 2026-01-08 22:16:07,784 | INFO     | current chi2=1.182197380589633 (change=67.46457231364036 %)
[2026-01-08 23:17:14] 2026-01-08 22:16:07,784 | INFO     | sum of square deviations: 12295263090.0
[2026-01-08 23:17:14] 2026-01-08 22:16:07,788 | INFO     | sum of deviations: -129072373977.0
[2026-01-08 23:17:14] 2026-01-08 22:16:07,788 | INFO     | mean x: 1767900046.0
[2026-01-08 23:17:14] 2026-01-08 22:16:07,788 | INFO     | mean y: 2532501.607038123
[2026-01-08 23:17:14] 2026-01-08 22:16:07,789 | INFO     | intersect: 18561472983.07237
[2026-01-08 23:17:14] 2026-01-08 22:16:07,789 | INFO     | chi2: 1.0782777725274828
[2026-01-08 23:17:14] 2026-01-08 22:16:07,789 | INFO     | current chi2=1.0782777725274828 (change=8.790377120470298 %)
[2026-01-08 23:17:14] 2026-01-08 22:16:07,789 | INFO     | left removable region: 30
[2026-01-08 23:17:14] 2026-01-08 22:16:07,790 | INFO     | sum of square deviations: 10160711440.0
[2026-01-08 23:17:14] 2026-01-08 22:16:07,800 | INFO     | sum of deviations: -74108120389.50002
[2026-01-08 23:17:14] 2026-01-08 22:16:07,800 | INFO     | mean x: 1767900320.5
[2026-01-08 23:17:14] 2026-01-08 22:16:07,800 | INFO     | mean y: 2530247.790625
[2026-01-08 23:17:14] 2026-01-08 22:16:07,800 | INFO     | intersect: 12896880270.61242
[2026-01-08 23:17:14] 2026-01-08 22:16:07,801 | INFO     | chi2: 0.2651974117962513
[2026-01-08 23:17:14] 2026-01-08 22:16:07,801 | INFO     | current memory leak: -7.29 B/s (using 320 data points, chi2=0.27)
[2026-01-08 23:17:14] 2026-01-08 22:16:07,802 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-08 23:17:14] 2026-01-08 22:16:07,802 | INFO     | ..............................
[2026-01-08 23:17:14] 2026-01-08 22:16:07,802 | INFO     | . Timing measurements:
[2026-01-08 23:17:14] 2026-01-08 22:16:07,802 | INFO     | . get job = 0 s
[2026-01-08 23:17:14] 2026-01-08 22:16:07,802 | INFO     | . initial setup = 11 s
[2026-01-08 23:17:14] 2026-01-08 22:16:07,802 | INFO     | . payload setup = 147 s
[2026-01-08 23:17:14] 2026-01-08 22:16:07,803 | INFO     | . stage-in = 0 s
[2026-01-08 23:17:14] 2026-01-08 22:16:07,803 | INFO     | . payload execution = 21874 s
[2026-01-08 23:17:14] 2026-01-08 22:16:07,803 | INFO     | . stage-out = 5 s
[2026-01-08 23:17:14] 2026-01-08 22:16:07,803 | INFO     | . log creation = 1 s
[2026-01-08 23:17:14] 2026-01-08 22:16:07,803 | INFO     | ..............................
[2026-01-08 23:17:14] 2026-01-08 22:16:08,351 | INFO     | 
[2026-01-08 23:17:14] 2026-01-08 22:16:08,351 | INFO     | job summary report
[2026-01-08 23:17:14] 2026-01-08 22:16:08,351 | INFO     | --------------------------------------------------
[2026-01-08 23:17:14] 2026-01-08 22:16:08,351 | INFO     | PanDA job id: 6962917903
[2026-01-08 23:17:14] 2026-01-08 22:16:08,351 | INFO     | task id: 47898826
[2026-01-08 23:17:14] 2026-01-08 22:16:08,351 | INFO     | errors: (none)
[2026-01-08 23:17:14] 2026-01-08 22:16:08,352 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 23:17:14] 2026-01-08 22:16:08,352 | INFO     | pilot state: finished 
[2026-01-08 23:17:14] 2026-01-08 22:16:08,352 | INFO     | transexitcode: 0
[2026-01-08 23:17:14] 2026-01-08 22:16:08,352 | INFO     | exeerrorcode: 0
[2026-01-08 23:17:14] 2026-01-08 22:16:08,352 | INFO     | exeerrordiag: 
[2026-01-08 23:17:14] 2026-01-08 22:16:08,352 | INFO     | exitcode: 0
[2026-01-08 23:17:14] 2026-01-08 22:16:08,352 | INFO     | exitmsg: OK
[2026-01-08 23:17:14] 2026-01-08 22:16:08,352 | INFO     | cpuconsumptiontime: 82599 s
[2026-01-08 23:17:14] 2026-01-08 22:16:08,352 | INFO     | nevents: 400
[2026-01-08 23:17:14] 2026-01-08 22:16:08,353 | INFO     | neventsw: 0
[2026-01-08 23:17:14] 2026-01-08 22:16:08,353 | INFO     | pid: 4048
[2026-01-08 23:17:14] 2026-01-08 22:16:08,353 | INFO     | pgrp: 4048
[2026-01-08 23:17:14] 2026-01-08 22:16:08,353 | INFO     | corecount: 8
[2026-01-08 23:17:14] 2026-01-08 22:16:08,353 | INFO     | event service: False
[2026-01-08 23:17:14] 2026-01-08 22:16:08,353 | INFO     | sizes: {0: 2283141, 1: 2283826, 2: 2284025, 13: 2284025, 24: 2284081, 34: 2284109, 45: 2284265, 56: 2284293, 67: 2284321, 77: 2284349, 88: 2284405, 99: 2284713, 10
[2026-01-08 23:17:14] 2026-01-08 22:16:08,353 | INFO     | --------------------------------------------------
[2026-01-08 23:17:14] 2026-01-08 22:16:08,353 | INFO     | 
[2026-01-08 23:17:14] 2026-01-08 22:16:08,353 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-08 23:17:14] 2026-01-08 22:16:08,941 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 23:17:14] 2026-01-08 22:16:08,942 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 23:17:14] 2026-01-08 22:16:08,942 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 23:17:14] 2026-01-08 22:16:08,942 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 23:17:14] 2026-01-08 22:16:08,942 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 23:17:14] 2026-01-08 22:16:08,942 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 23:17:14] 2026-01-08 22:16:08,942 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 23:17:14] 2026-01-08 22:16:08,942 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 23:17:14] 2026-01-08 22:16:08,942 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 23:17:14] 2026-01-08 22:16:08,942 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 23:17:14] 2026-01-08 22:16:08,943 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 23:17:14] 2026-01-08 22:16:08,943 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 23:17:14] 2026-01-08 22:16:08,943 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 23:17:14] 2026-01-08 22:16:08,943 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 23:17:14] 2026-01-08 22:16:08,943 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 23:17:14] 2026-01-08 22:16:08,943 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 23:17:14] 2026-01-08 22:16:08,943 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 23:17:14] 2026-01-08 22:16:08,943 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 23:17:14] 2026-01-08 22:16:08,943 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 23:17:14] 2026-01-08 22:16:08,944 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 23:17:14] 2026-01-08 22:16:08,944 | INFO     | job 6962917903 has completed (purged errors)
[2026-01-08 23:17:14] 2026-01-08 22:16:08,944 | INFO     | overall cleanup function is called
[2026-01-08 23:17:14] 2026-01-08 22:16:09,953 | INFO     | --- collectZombieJob: --- 10, [4048]
[2026-01-08 23:17:14] 2026-01-08 22:16:09,953 | INFO     | zombie collector waiting for pid 4048
[2026-01-08 23:17:14] 2026-01-08 22:16:09,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 23:17:14] 2026-01-08 22:16:09,953 | INFO     | collected zombie processes
[2026-01-08 23:17:14] 2026-01-08 22:16:09,953 | INFO     | will attempt to kill all subprocesses of pid=4048
[2026-01-08 23:17:14] 2026-01-08 22:16:10,047 | INFO     | process IDs to be killed: [4048] (in reverse order)
[2026-01-08 23:17:14] 2026-01-08 22:16:10,964 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 23:17:14] 2026-01-08 22:16:10,965 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 23:17:14] 2026-01-08 22:16:10,967 | INFO     | did not find any defunct processes belonging to 4048
[2026-01-08 23:17:14] 2026-01-08 22:16:10,969 | INFO     | did not find any defunct processes belonging to 4048
[2026-01-08 23:17:14] 2026-01-08 22:16:10,969 | INFO     | ready for new job
[2026-01-08 23:17:14] 2026-01-08 22:16:10,969 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 23:17:14] 2026-01-08 22:16:10,972 | INFO     | ***************************************
[2026-01-08 23:17:14] 2026-01-08 22:16:10,972 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 23:17:14] 2026-01-08 22:16:10,972 | INFO     | ***************************************
[2026-01-08 23:17:14] 2026-01-08 22:16:10,972 | INFO     | 
[2026-01-08 23:17:14] 2026-01-08 22:16:10,973 | INFO     | pilot is running in a VM
[2026-01-08 23:17:14] 2026-01-08 22:16:10,973 | INFO     | architecture information:
[2026-01-08 23:17:14] 2026-01-08 22:16:10,984 | INFO     | executing command: cat /etc/os-release
[2026-01-08 23:17:14] 2026-01-08 22:16:11,246 | INFO     | cat /etc/os-release:
[2026-01-08 23:17:14] NAME="CentOS Linux"
[2026-01-08 23:17:14] VERSION="7 (Core)"
[2026-01-08 23:17:14] ID="centos"
[2026-01-08 23:17:14] ID_LIKE="rhel fedora"
[2026-01-08 23:17:14] VERSION_ID="7"
[2026-01-08 23:17:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 23:17:14] ANSI_COLOR="0;31"
[2026-01-08 23:17:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 23:17:14] HOME_URL="https://www.centos.org/"
[2026-01-08 23:17:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 23:17:14] 
[2026-01-08 23:17:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 23:17:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 23:17:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 23:17:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 23:17:14] 
[2026-01-08 23:17:14] 2026-01-08 22:16:11,246 | INFO     | ***************************************
[2026-01-08 23:17:14] 2026-01-08 22:16:11,750 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-08 23:17:14] 2026-01-08 22:16:12,044 | INFO     | sufficient remaining disk space (496377004032 B)
[2026-01-08 23:17:14] 2026-01-08 22:16:12,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 23:17:14] 2026-01-08 22:16:12,045 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 23:17:14] 2026-01-08 22:16:12,045 | INFO     | update_server=False
[2026-01-08 23:17:14] 2026-01-08 22:16:12,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 23:17:14] 2026-01-08 22:16:12,046 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 23:17:14] 2026-01-08 22:16:12,246 | INFO     | all data control threads have been joined
[2026-01-08 23:17:14] 2026-01-08 22:16:12,635 | INFO     | all payload control threads have been joined
[2026-01-08 23:17:14] 2026-01-08 22:16:12,674 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:17:14] 2026-01-08 22:16:12,674 | INFO     | aborting loop
[2026-01-08 23:17:14] 2026-01-08 22:16:13,007 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:17:14] 2026-01-08 22:16:13,051 | INFO     | [job] retrieve thread has finished
[2026-01-08 23:17:14] 2026-01-08 22:16:13,252 | INFO     | [data] control thread has finished
[2026-01-08 23:17:14] 2026-01-08 22:16:13,342 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 23:17:14] 2026-01-08 22:16:13,430 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 23:17:14] 2026-01-08 22:16:13,482 | INFO     | all job control threads have been joined
[2026-01-08 23:17:14] 2026-01-08 22:16:13,503 | INFO     | [payload] validate_post thread has finished
[2026-01-08 23:17:14] 2026-01-08 22:16:13,592 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 23:17:14] 2026-01-08 22:16:13,641 | INFO     | [payload] control thread has finished
[2026-01-08 23:17:14] 2026-01-08 22:16:13,680 | INFO     | [job] job monitor thread has finished
[2026-01-08 23:17:14] 2026-01-08 22:16:14,013 | INFO     | [job] queue monitor thread has finished
[2026-01-08 23:17:14] 2026-01-08 22:16:14,053 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 23:17:14] 2026-01-08 22:16:14,093 | INFO     | [job] validate thread has finished
[2026-01-08 23:17:14] 2026-01-08 22:16:14,182 | INFO     | [payload] failed_post thread has finished
[2026-01-08 23:17:14] 2026-01-08 22:16:14,485 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 23:17:14] 2026-01-08 22:16:14,488 | INFO     | [job] control thread has finished
[2026-01-08 23:17:14] 2026-01-08 22:16:14,548 | INFO     | [data] copytool_in thread has finished
[2026-01-08 23:17:14] 2026-01-08 22:16:15,437 | INFO     | [data] copytool_out thread has finished
[2026-01-08 23:17:14] 2026-01-08 22:16:16,055 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 23:17:14] 2026-01-08 22:16:40,854 | INFO     | PID=29958 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 23:17:14] 2026-01-08 22:16:40,854 | INFO     | .. there are 2 such processes running
[2026-01-08 23:17:14] 2026-01-08 22:16:40,854 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 23:17:14] 2026-01-08 22:16:40,854 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 23:17:14] 2026-01-08 22:16:40,854 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 23:17:14] 2026-01-08 22:17:03,310 | INFO     | [monitor] cgroup control has ended
[2026-01-08 23:17:14] 2026-01-08 22:17:04,131 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140032232609600)>', '<ExcThread(monitor, started 140031922509568)>']
[2026-01-08 23:17:14] 2026-01-08 22:17:04,999 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 23:17:14] 2026-01-08 22:17:04,999 | INFO     | [monitor] control thread has ended
[2026-01-08 23:17:14] 2026-01-08 22:17:09,157 | INFO     | all workflow threads have been joined
[2026-01-08 23:17:14] 2026-01-08 22:17:09,157 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 23:17:14] 2026-01-08 22:17:09,157 | INFO     | traces error code: 0
[2026-01-08 23:17:14] 2026-01-08 22:17:09,157 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 23:17:14] 2026-01-08 22:17:09,590 [wrapper] ==== pilot stdout END ====
[2026-01-08 23:17:14] 2026-01-08 22:17:09,685 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 23:17:14] 2026-01-08 22:17:09,754 [wrapper] pilotpid: 29958
[2026-01-08 23:17:14] 2026-01-08 22:17:09,861 [wrapper] Pilot exit status: 0
[2026-01-08 23:17:14] 2026-01-08 22:17:10,365 [wrapper] pandaids: 6962917903
[2026-01-08 23:17:14] 2026-01-08 22:17:11,350 [wrapper] cleanup supervisor_pilot  3321 29959
[2026-01-08 23:17:14] 2026-01-08 22:17:11,434 [wrapper] Test setup, not cleaning
[2026-01-08 23:17:14] 2026-01-08 22:17:11,586 [wrapper] apfmon messages muted
[2026-01-08 23:17:14] 2026-01-08 22:17:11,721 [wrapper] ==== wrapper stdout END ====
[2026-01-08 23:17:14] 2026-01-08 22:17:11,771 [wrapper] ==== wrapper stderr END ====
[2026-01-08 23:17:14]  *** Error codes and diagnostics ***
[2026-01-08 23:17:14]     "exeErrorCode": 0,
[2026-01-08 23:17:14]     "exeErrorDiag": "",
[2026-01-08 23:17:14]     "pilotErrorCode": 0,
[2026-01-08 23:17:14]     "pilotErrorDiag": "",
[2026-01-08 23:17:14]  *** Listing of results directory ***
[2026-01-08 23:17:14] total 446808
[2026-01-08 23:17:14] -rw-r--r--. 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-08 23:17:14] -rwx------. 1 boinc boinc     36322 Jan  8 09:04 runpilot2-wrapper.sh
[2026-01-08 23:17:14] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:07 queuedata.json
[2026-01-08 23:17:14] -rw-r--r--. 1 boinc boinc       100 Jan  8 16:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 23:17:14] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 16:59 run_atlas
[2026-01-08 23:17:14] -rw-r--r--. 1 boinc boinc       105 Jan  8 16:59 job.xml
[2026-01-08 23:17:14] -rw-r--r--. 2 boinc boinc 226878077 Jan  8 16:59 EVNT.47898824._000662.pool.root.1
[2026-01-08 23:17:14] drwxrwx--x. 2 boinc boinc        68 Jan  8 16:59 shared
[2026-01-08 23:17:14] -rw-r--r--. 2 boinc boinc    592400 Jan  8 16:59 input.tar.gz
[2026-01-08 23:17:14] -rw-r--r--. 1 boinc boinc      6390 Jan  8 16:59 init_data.xml
[2026-01-08 23:17:14] -rw-r--r--. 2 boinc boinc     15847 Jan  8 16:59 start_atlas.sh
[2026-01-08 23:17:14] -rw-r--r--. 1 boinc boinc         0 Jan  8 16:59 boinc_lockfile
[2026-01-08 23:17:14] -rw-r--r--. 1 boinc boinc      2519 Jan  8 16:59 pandaJob.out
[2026-01-08 23:17:14] -rw-------. 1 boinc boinc    989843 Jan  8 17:03 agis_schedconf.cvmfs.json
[2026-01-08 23:17:14] drwx------. 5 boinc boinc      4096 Jan  8 17:03 pilot3
[2026-01-08 23:17:14] -rw-------. 1 boinc boinc 219720289 Jan  8 23:12 HITS.47898826._019983.pool.root.1
[2026-01-08 23:17:14] -rw-r--r--. 1 boinc boinc       531 Jan  8 23:12 boinc_task_state.xml
[2026-01-08 23:17:14] -rw-------. 1 boinc boinc      1011 Jan  8 23:14 memory_monitor_summary.json
[2026-01-08 23:17:14] -rw-------. 1 boinc boinc   1516240 Jan  8 23:14 agis_ddmendpoints.agis.ALL.json
[2026-01-08 23:17:14] -rw-------. 1 boinc boinc    556522 Jan  8 23:14 log.47898826._019983.job.log.tgz.1
[2026-01-08 23:17:14] -rw-------. 1 boinc boinc        95 Jan  8 23:16 pilot_heartbeat.json
[2026-01-08 23:17:14] -rw-------. 1 boinc boinc      7779 Jan  8 23:16 heartbeat.json
[2026-01-08 23:17:14] -rw-r--r--. 1 boinc boinc      8192 Jan  8 23:16 boinc_mmap_file
[2026-01-08 23:17:14] -rw-r--r--. 1 boinc boinc        28 Jan  8 23:16 wrapper_checkpoint.txt
[2026-01-08 23:17:14] -rw-------. 1 boinc boinc      4884 Jan  8 23:17 pilotlog.txt
[2026-01-08 23:17:14] -rw-------. 1 boinc boinc   2958807 Jan  8 23:17 log.47898826._019983.job.log.1
[2026-01-08 23:17:14] -rw-------. 1 boinc boinc       357 Jan  8 23:17 output.list
[2026-01-08 23:17:14] -rw-r--r--. 1 boinc boinc       620 Jan  8 23:17 runtime_log
[2026-01-08 23:17:14] -rw-------. 1 boinc boinc   3532800 Jan  8 23:17 result.tar.gz
[2026-01-08 23:17:14] -rw-r--r--. 1 boinc boinc      8817 Jan  8 23:17 runtime_log.err
[2026-01-08 23:17:14] -rw-------. 1 boinc boinc       657 Jan  8 23:17 npPODmBB0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHVeKDmzSXjUn.diag
[2026-01-08 23:17:14] -rw-r--r--. 1 boinc boinc     20763 Jan  8 23:17 stderr.txt
[2026-01-08 23:17:14] HITS file was successfully produced:
[2026-01-08 23:17:14] -rw-------. 1 boinc boinc 219720289 Jan  8 23:12 shared/HITS.pool.root.1
[2026-01-08 23:17:14]  *** Contents of shared directory: ***
[2026-01-08 23:17:14] total 440184
[2026-01-08 23:17:14] -rw-r--r--. 2 boinc boinc 226878077 Jan  8 16:59 ATLAS.root_0
[2026-01-08 23:17:14] -rw-r--r--. 2 boinc boinc    592400 Jan  8 16:59 input.tar.gz
[2026-01-08 23:17:14] -rw-r--r--. 2 boinc boinc     15847 Jan  8 16:59 start_atlas.sh
[2026-01-08 23:17:14] -rw-------. 1 boinc boinc 219720289 Jan  8 23:12 HITS.pool.root.1
[2026-01-08 23:17:14] -rw-------. 1 boinc boinc   3532800 Jan  8 23:17 result.tar.gz
23:17:16 (26211): run_atlas exited; CPU time 82828.676848
23:17:16 (26211): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN