Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:57:45 (32377): wrapper (7.7.26015): starting
10:57:45 (32377): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 10:57:45] Arguments: --nthreads 8
[2026-01-08 10:57:45] Threads: 8
[2026-01-08 10:57:45] Checking for CVMFS
[2026-01-08 10:57:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 10:57:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 10:57:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 10:57:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 10:57:55] 2.11.2.0 13921 33807 106052 154898 2 11 20192515 25165824 96 130560 0 15557017 99.846 9131578 4513 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 10:57:55] CVMFS is ok
[2026-01-08 10:57:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 10:57:56] Checking for apptainer binary...
[2026-01-08 10:57:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 10:57:56] Running /usr/bin/apptainer --version
[2026-01-08 10:57:56] apptainer version 1.3.2-1.el7
[2026-01-08 10:57:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 10:58:05] cg-vwn367.simple-grid.lan
[2026-01-08 10:58:05] apptainer works
[2026-01-08 10:58:05] Set ATHENA_PROC_NUMBER=8
[2026-01-08 10:58:05] Set ATHENA_CORE_NUMBER=8
[2026-01-08 10:58:05] Starting ATLAS job with PandaID=6962917860
[2026-01-08 10:58:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 17:05:18]  *** The last 200 lines of the pilot log: ***
[2026-01-08 17:05:18] 2026-01-08 16:04:27,003 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 17:05:18] 2026-01-08 16:04:27,010 | INFO     | fitting pss+swap vs Time
[2026-01-08 17:05:18] 2026-01-08 16:04:27,011 | INFO     | sum of square deviations: 12733038740.0
[2026-01-08 17:05:18] 2026-01-08 16:04:27,022 | INFO     | time since job start (21718s) is within the limit (174528.0s)
[2026-01-08 17:05:18] 2026-01-08 16:04:27,028 | INFO     | sum of deviations: 272003094441.99985
[2026-01-08 17:05:18] 2026-01-08 16:04:27,028 | INFO     | mean x: 1767877610.0
[2026-01-08 17:05:18] 2026-01-08 16:04:27,028 | INFO     | mean y: 2415749.8057971015
[2026-01-08 17:05:18] 2026-01-08 16:04:27,028 | INFO     | intersect: -37762974769.59248
[2026-01-08 17:05:18] 2026-01-08 16:04:27,029 | INFO     | chi2: 10.41695270228121
[2026-01-08 17:05:18] 2026-01-08 16:04:27,030 | INFO     | sum of square deviations: 12187409905.0
[2026-01-08 17:05:18] 2026-01-08 16:04:27,034 | INFO     | sum of deviations: 289941264981.50006
[2026-01-08 17:05:18] 2026-01-08 16:04:27,034 | INFO     | mean x: 1767877457.5
[2026-01-08 17:05:18] 2026-01-08 16:04:27,034 | INFO     | mean y: 2420688.044117647
[2026-01-08 17:05:18] 2026-01-08 16:04:27,034 | INFO     | intersect: -42055787770.96053
[2026-01-08 17:05:18] 2026-01-08 16:04:27,035 | INFO     | chi2: 9.709839514545846
[2026-01-08 17:05:18] 2026-01-08 16:04:27,035 | INFO     | current chi2=9.709839514545846 (change=6.7881002049717685 %)
[2026-01-08 17:05:18] 2026-01-08 16:04:27,035 | INFO     | right removable region: 339
[2026-01-08 17:05:18] 2026-01-08 16:04:27,036 | INFO     | sum of square deviations: 12187409905.0
[2026-01-08 17:05:18] 2026-01-08 16:04:27,040 | INFO     | sum of deviations: 147320673366.00003
[2026-01-08 17:05:18] 2026-01-08 16:04:27,040 | INFO     | mean x: 1767877762.5
[2026-01-08 17:05:18] 2026-01-08 16:04:27,040 | INFO     | mean y: 2450594.9764705882
[2026-01-08 17:05:18] 2026-01-08 16:04:27,040 | INFO     | intersect: -21367548808.541374
[2026-01-08 17:05:18] 2026-01-08 16:04:27,041 | INFO     | chi2: 4.990964842868237
[2026-01-08 17:05:18] 2026-01-08 16:04:27,041 | INFO     | current chi2=4.990964842868237 (change=52.088053142688594 %)
[2026-01-08 17:05:18] 2026-01-08 16:04:27,041 | INFO     | sum of square deviations: 11657595320.0
[2026-01-08 17:05:18] 2026-01-08 16:04:27,046 | INFO     | sum of deviations: 47506997213.000015
[2026-01-08 17:05:18] 2026-01-08 16:04:27,046 | INFO     | mean x: 1767877915.0
[2026-01-08 17:05:18] 2026-01-08 16:04:27,046 | INFO     | mean y: 2479303.334328358
[2026-01-08 17:05:18] 2026-01-08 16:04:27,046 | INFO     | intersect: -7201971432.465384
[2026-01-08 17:05:18] 2026-01-08 16:04:27,047 | INFO     | chi2: 1.741619587021336
[2026-01-08 17:05:18] 2026-01-08 16:04:27,047 | INFO     | current chi2=1.741619587021336 (change=65.10455108675036 %)
[2026-01-08 17:05:18] 2026-01-08 16:04:27,047 | INFO     | sum of square deviations: 11143362422.5
[2026-01-08 17:05:18] 2026-01-08 16:04:27,051 | INFO     | sum of deviations: -1851237241.5000038
[2026-01-08 17:05:18] 2026-01-08 16:04:27,062 | INFO     | mean x: 1767878067.5
[2026-01-08 17:05:18] 2026-01-08 16:04:27,062 | INFO     | mean y: 2493878.9484848483
[2026-01-08 17:05:18] 2026-01-08 16:04:27,062 | INFO     | intersect: 296189945.9792848
[2026-01-08 17:05:18] 2026-01-08 16:04:27,063 | INFO     | chi2: 0.7895090649012287
[2026-01-08 17:05:18] 2026-01-08 16:04:27,063 | INFO     | current chi2=0.7895090649012287 (change=54.66811060321655 %)
[2026-01-08 17:05:18] 2026-01-08 16:04:27,064 | INFO     | sum of square deviations: 10644478650.0
[2026-01-08 17:05:18] 2026-01-08 16:04:27,067 | INFO     | sum of deviations: -5244134131.999998
[2026-01-08 17:05:18] 2026-01-08 16:04:27,068 | INFO     | mean x: 1767878220.0
[2026-01-08 17:05:18] 2026-01-08 16:04:27,068 | INFO     | mean y: 2494914.2184615387
[2026-01-08 17:05:18] 2026-01-08 16:04:27,068 | INFO     | intersect: 873461996.7370028
[2026-01-08 17:05:18] 2026-01-08 16:04:27,068 | INFO     | chi2: 0.786570194236399
[2026-01-08 17:05:18] 2026-01-08 16:04:27,069 | INFO     | current chi2=0.786570194236399 (change=0.3722402687292072 %)
[2026-01-08 17:05:18] 2026-01-08 16:04:27,069 | INFO     | left removable region: 40
[2026-01-08 17:05:18] 2026-01-08 16:04:27,069 | INFO     | sum of square deviations: 8288713550.0
[2026-01-08 17:05:18] 2026-01-08 16:04:27,073 | INFO     | sum of deviations: 14186666666.000004
[2026-01-08 17:05:18] 2026-01-08 16:04:27,073 | INFO     | mean x: 1767878647.0
[2026-01-08 17:05:18] 2026-01-08 16:04:27,073 | INFO     | mean y: 2501707.397993311
[2026-01-08 17:05:18] 2026-01-08 16:04:27,073 | INFO     | intersect: -3023336369.842363
[2026-01-08 17:05:18] 2026-01-08 16:04:27,074 | INFO     | chi2: 0.0011825242521449335
[2026-01-08 17:05:18] 2026-01-08 16:04:27,074 | INFO     | current memory leak: 1.71 B/s (using 299 data points, chi2=0.00)
[2026-01-08 17:05:18] 2026-01-08 16:04:27,075 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-08 17:05:18] 2026-01-08 16:04:27,075 | INFO     | ..............................
[2026-01-08 17:05:18] 2026-01-08 16:04:27,075 | INFO     | . Timing measurements:
[2026-01-08 17:05:18] 2026-01-08 16:04:27,075 | INFO     | . get job = 0 s
[2026-01-08 17:05:18] 2026-01-08 16:04:27,075 | INFO     | . initial setup = 16 s
[2026-01-08 17:05:18] 2026-01-08 16:04:27,075 | INFO     | . payload setup = 175 s
[2026-01-08 17:05:18] 2026-01-08 16:04:27,075 | INFO     | . stage-in = 0 s
[2026-01-08 17:05:18] 2026-01-08 16:04:27,076 | INFO     | . payload execution = 21194 s
[2026-01-08 17:05:18] 2026-01-08 16:04:27,076 | INFO     | . stage-out = 4 s
[2026-01-08 17:05:18] 2026-01-08 16:04:27,076 | INFO     | . log creation = 1 s
[2026-01-08 17:05:18] 2026-01-08 16:04:27,076 | INFO     | ..............................
[2026-01-08 17:05:18] 2026-01-08 16:04:27,510 | INFO     | 
[2026-01-08 17:05:18] 2026-01-08 16:04:27,510 | INFO     | job summary report
[2026-01-08 17:05:18] 2026-01-08 16:04:27,510 | INFO     | --------------------------------------------------
[2026-01-08 17:05:18] 2026-01-08 16:04:27,510 | INFO     | PanDA job id: 6962917860
[2026-01-08 17:05:18] 2026-01-08 16:04:27,510 | INFO     | task id: 47898826
[2026-01-08 17:05:18] 2026-01-08 16:04:27,510 | INFO     | errors: (none)
[2026-01-08 17:05:18] 2026-01-08 16:04:27,510 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 17:05:18] 2026-01-08 16:04:27,511 | INFO     | pilot state: finished 
[2026-01-08 17:05:18] 2026-01-08 16:04:27,511 | INFO     | transexitcode: 0
[2026-01-08 17:05:18] 2026-01-08 16:04:27,511 | INFO     | exeerrorcode: 0
[2026-01-08 17:05:18] 2026-01-08 16:04:27,511 | INFO     | exeerrordiag: 
[2026-01-08 17:05:18] 2026-01-08 16:04:27,511 | INFO     | exitcode: 0
[2026-01-08 17:05:18] 2026-01-08 16:04:27,511 | INFO     | exitmsg: OK
[2026-01-08 17:05:18] 2026-01-08 16:04:27,511 | INFO     | cpuconsumptiontime: 78858 s
[2026-01-08 17:05:18] 2026-01-08 16:04:27,511 | INFO     | nevents: 400
[2026-01-08 17:05:18] 2026-01-08 16:04:27,512 | INFO     | neventsw: 0
[2026-01-08 17:05:18] 2026-01-08 16:04:27,512 | INFO     | pid: 10487
[2026-01-08 17:05:18] 2026-01-08 16:04:27,512 | INFO     | pgrp: 10487
[2026-01-08 17:05:18] 2026-01-08 16:04:27,512 | INFO     | corecount: 8
[2026-01-08 17:05:18] 2026-01-08 16:04:27,512 | INFO     | event service: False
[2026-01-08 17:05:18] 2026-01-08 16:04:27,512 | INFO     | sizes: {0: 2283742, 1: 2283997, 2: 2283997, 12: 2284025, 23: 2284053, 34: 2284081, 45: 2284237, 55: 2284265, 66: 2284293, 77: 2284321, 87: 2284377, 98: 2284685, 10
[2026-01-08 17:05:18] 2026-01-08 16:04:27,512 | INFO     | --------------------------------------------------
[2026-01-08 17:05:18] 2026-01-08 16:04:27,512 | INFO     | 
[2026-01-08 17:05:18] 2026-01-08 16:04:27,513 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-08 17:05:18] 2026-01-08 16:04:28,079 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 17:05:18] 2026-01-08 16:04:28,080 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 17:05:18] 2026-01-08 16:04:28,080 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 17:05:18] 2026-01-08 16:04:28,080 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 17:05:18] 2026-01-08 16:04:28,080 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 17:05:18] 2026-01-08 16:04:28,080 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 17:05:18] 2026-01-08 16:04:28,081 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 17:05:18] 2026-01-08 16:04:28,081 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 17:05:18] 2026-01-08 16:04:28,081 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 17:05:18] 2026-01-08 16:04:28,081 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 17:05:18] 2026-01-08 16:04:28,081 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 17:05:18] 2026-01-08 16:04:28,081 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 17:05:18] 2026-01-08 16:04:28,081 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 17:05:18] 2026-01-08 16:04:28,081 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 17:05:18] 2026-01-08 16:04:28,081 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 17:05:18] 2026-01-08 16:04:28,082 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 17:05:18] 2026-01-08 16:04:28,082 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 17:05:18] 2026-01-08 16:04:28,082 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 17:05:18] 2026-01-08 16:04:28,082 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 17:05:18] 2026-01-08 16:04:28,082 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 17:05:18] 2026-01-08 16:04:28,082 | INFO     | job 6962917860 has completed (purged errors)
[2026-01-08 17:05:18] 2026-01-08 16:04:28,082 | INFO     | overall cleanup function is called
[2026-01-08 17:05:18] 2026-01-08 16:04:29,097 | INFO     | --- collectZombieJob: --- 10, [10487]
[2026-01-08 17:05:18] 2026-01-08 16:04:29,097 | INFO     | zombie collector waiting for pid 10487
[2026-01-08 17:05:18] 2026-01-08 16:04:29,097 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 17:05:18] 2026-01-08 16:04:29,097 | INFO     | collected zombie processes
[2026-01-08 17:05:18] 2026-01-08 16:04:29,097 | INFO     | will attempt to kill all subprocesses of pid=10487
[2026-01-08 17:05:18] 2026-01-08 16:04:29,201 | INFO     | process IDs to be killed: [10487] (in reverse order)
[2026-01-08 17:05:18] 2026-01-08 16:04:29,960 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 17:05:18] 2026-01-08 16:04:29,960 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 17:05:18] 2026-01-08 16:04:29,962 | INFO     | did not find any defunct processes belonging to 10487
[2026-01-08 17:05:18] 2026-01-08 16:04:29,964 | INFO     | did not find any defunct processes belonging to 10487
[2026-01-08 17:05:18] 2026-01-08 16:04:29,965 | INFO     | ready for new job
[2026-01-08 17:05:18] 2026-01-08 16:04:29,965 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 17:05:18] 2026-01-08 16:04:29,967 | INFO     | ***************************************
[2026-01-08 17:05:18] 2026-01-08 16:04:29,967 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 17:05:18] 2026-01-08 16:04:29,967 | INFO     | ***************************************
[2026-01-08 17:05:18] 2026-01-08 16:04:29,968 | INFO     | 
[2026-01-08 17:05:18] 2026-01-08 16:04:29,968 | INFO     | pilot is running in a VM
[2026-01-08 17:05:18] 2026-01-08 16:04:29,968 | INFO     | architecture information:
[2026-01-08 17:05:18] 2026-01-08 16:04:29,983 | INFO     | executing command: cat /etc/os-release
[2026-01-08 17:05:18] 2026-01-08 16:04:30,285 | INFO     | cat /etc/os-release:
[2026-01-08 17:05:18] NAME="CentOS Linux"
[2026-01-08 17:05:18] VERSION="7 (Core)"
[2026-01-08 17:05:18] ID="centos"
[2026-01-08 17:05:18] ID_LIKE="rhel fedora"
[2026-01-08 17:05:18] VERSION_ID="7"
[2026-01-08 17:05:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 17:05:18] ANSI_COLOR="0;31"
[2026-01-08 17:05:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 17:05:18] HOME_URL="https://www.centos.org/"
[2026-01-08 17:05:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 17:05:18] 
[2026-01-08 17:05:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 17:05:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 17:05:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 17:05:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 17:05:18] 
[2026-01-08 17:05:18] 2026-01-08 16:04:30,285 | INFO     | ***************************************
[2026-01-08 17:05:18] 2026-01-08 16:04:30,789 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-08 17:05:18] 2026-01-08 16:04:30,988 | INFO     | sufficient remaining disk space (496697868288 B)
[2026-01-08 17:05:18] 2026-01-08 16:04:30,989 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 17:05:18] 2026-01-08 16:04:30,989 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 17:05:18] 2026-01-08 16:04:30,989 | INFO     | update_server=False
[2026-01-08 17:05:18] 2026-01-08 16:04:30,989 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 17:05:18] 2026-01-08 16:04:30,990 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 17:05:18] 2026-01-08 16:04:31,344 | INFO     | all data control threads have been joined
[2026-01-08 17:05:18] 2026-01-08 16:04:31,740 | INFO     | all job control threads have been joined
[2026-01-08 17:05:18] 2026-01-08 16:04:31,771 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:05:18] 2026-01-08 16:04:31,771 | INFO     | aborting loop
[2026-01-08 17:05:18] 2026-01-08 16:04:31,807 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 17:05:18] 2026-01-08 16:04:31,995 | INFO     | [job] retrieve thread has finished
[2026-01-08 17:05:18] 2026-01-08 16:04:32,013 | INFO     | all payload control threads have been joined
[2026-01-08 17:05:18] 2026-01-08 16:04:32,077 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 17:05:18] 2026-01-08 16:04:32,261 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 17:05:18] 2026-01-08 16:04:32,350 | INFO     | [data] control thread has finished
[2026-01-08 17:05:18] 2026-01-08 16:04:32,521 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:05:18] 2026-01-08 16:04:32,656 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 17:05:18] 2026-01-08 16:04:32,746 | INFO     | [job] control thread has finished
[2026-01-08 17:05:18] 2026-01-08 16:04:32,770 | INFO     | [payload] failed_post thread has finished
[2026-01-08 17:05:18] 2026-01-08 16:04:32,777 | INFO     | [job] job monitor thread has finished
[2026-01-08 17:05:18] 2026-01-08 16:04:33,019 | INFO     | [payload] control thread has finished
[2026-01-08 17:05:18] 2026-01-08 16:04:33,056 | INFO     | [data] copytool_in thread has finished
[2026-01-08 17:05:18] 2026-01-08 16:04:33,189 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 17:05:18] 2026-01-08 16:04:33,273 | INFO     | [payload] validate_post thread has finished
[2026-01-08 17:05:18] 2026-01-08 16:04:33,465 | INFO     | [job] validate thread has finished
[2026-01-08 17:05:18] 2026-01-08 16:04:33,527 | INFO     | [job] queue monitor thread has finished
[2026-01-08 17:05:18] 2026-01-08 16:04:33,814 | INFO     | [data] copytool_out thread has finished
[2026-01-08 17:05:18] 2026-01-08 16:04:35,002 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 17:05:18] 2026-01-08 16:05:00,171 | INFO     | PID=4035 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 17:05:18] 2026-01-08 16:05:00,172 | INFO     | .. there are 2 such processes running
[2026-01-08 17:05:18] 2026-01-08 16:05:00,173 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 17:05:18] 2026-01-08 16:05:00,173 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 17:05:18] 2026-01-08 16:05:00,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 17:05:18] 2026-01-08 16:05:06,577 | INFO     | [monitor] cgroup control has ended
[2026-01-08 17:05:18] 2026-01-08 16:05:07,410 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140343014946624)>', '<ExcThread(monitor, started 140342250682112)>']
[2026-01-08 17:05:18] 2026-01-08 16:05:08,222 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 17:05:18] 2026-01-08 16:05:08,222 | INFO     | [monitor] control thread has ended
[2026-01-08 17:05:18] 2026-01-08 16:05:12,436 | INFO     | all workflow threads have been joined
[2026-01-08 17:05:18] 2026-01-08 16:05:12,436 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 17:05:18] 2026-01-08 16:05:12,436 | INFO     | traces error code: 0
[2026-01-08 17:05:18] 2026-01-08 16:05:12,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 17:05:18] 2026-01-08 16:05:12,831 [wrapper] ==== pilot stdout END ====
[2026-01-08 17:05:18] 2026-01-08 16:05:12,959 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 17:05:18] 2026-01-08 16:05:13,047 [wrapper] pilotpid: 4035
[2026-01-08 17:05:18] 2026-01-08 16:05:13,136 [wrapper] Pilot exit status: 0
[2026-01-08 17:05:18] 2026-01-08 16:05:13,643 [wrapper] pandaids: 6962917860
[2026-01-08 17:05:18] 2026-01-08 16:05:14,810 [wrapper] cleanup supervisor_pilot  9894 4036
[2026-01-08 17:05:18] 2026-01-08 16:05:14,856 [wrapper] Test setup, not cleaning
[2026-01-08 17:05:18] 2026-01-08 16:05:14,969 [wrapper] apfmon messages muted
[2026-01-08 17:05:18] 2026-01-08 16:05:15,086 [wrapper] ==== wrapper stdout END ====
[2026-01-08 17:05:18] 2026-01-08 16:05:15,195 [wrapper] ==== wrapper stderr END ====
[2026-01-08 17:05:18]  *** Error codes and diagnostics ***
[2026-01-08 17:05:18]     "exeErrorCode": 0,
[2026-01-08 17:05:18]     "exeErrorDiag": "",
[2026-01-08 17:05:18]     "pilotErrorCode": 0,
[2026-01-08 17:05:18]     "pilotErrorDiag": "",
[2026-01-08 17:05:18]  *** Listing of results directory ***
[2026-01-08 17:05:18] total 443304
[2026-01-08 17:05:18] -rw-r--r--. 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-08 17:05:18] -rwx------. 1 boinc boinc     36322 Jan  8 09:04 runpilot2-wrapper.sh
[2026-01-08 17:05:18] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:07 queuedata.json
[2026-01-08 17:05:18] -rw-r--r--. 1 boinc boinc       100 Jan  8 10:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 17:05:18] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 10:57 run_atlas
[2026-01-08 17:05:18] -rw-r--r--. 1 boinc boinc       105 Jan  8 10:57 job.xml
[2026-01-08 17:05:18] -rw-r--r--. 1 boinc boinc      6390 Jan  8 10:57 init_data.xml
[2026-01-08 17:05:18] -rw-r--r--. 2 boinc boinc 227231362 Jan  8 10:57 EVNT.47898824._000660.pool.root.1
[2026-01-08 17:05:18] -rw-r--r--. 2 boinc boinc     15847 Jan  8 10:57 start_atlas.sh
[2026-01-08 17:05:18] drwxrwx--x. 2 boinc boinc        68 Jan  8 10:57 shared
[2026-01-08 17:05:18] -rw-r--r--. 2 boinc boinc    592399 Jan  8 10:57 input.tar.gz
[2026-01-08 17:05:18] -rw-r--r--. 1 boinc boinc         0 Jan  8 10:57 boinc_lockfile
[2026-01-08 17:05:18] -rw-r--r--. 1 boinc boinc      2519 Jan  8 10:58 pandaJob.out
[2026-01-08 17:05:18] -rw-------. 1 boinc boinc    989843 Jan  8 11:02 agis_schedconf.cvmfs.json
[2026-01-08 17:05:18] drwx------. 5 boinc boinc      4096 Jan  8 11:02 pilot3
[2026-01-08 17:05:18] -rw-------. 1 boinc boinc 215942432 Jan  8 17:00 HITS.47898826._019940.pool.root.1
[2026-01-08 17:05:18] -rw-r--r--. 1 boinc boinc       531 Jan  8 17:01 boinc_task_state.xml
[2026-01-08 17:05:18] -rw-------. 1 boinc boinc      1015 Jan  8 17:02 memory_monitor_summary.json
[2026-01-08 17:05:18] -rw-------. 1 boinc boinc   1516240 Jan  8 17:02 agis_ddmendpoints.agis.ALL.json
[2026-01-08 17:05:18] -rw-------. 1 boinc boinc    555049 Jan  8 17:02 log.47898826._019940.job.log.tgz.1
[2026-01-08 17:05:18] -rw-------. 1 boinc boinc      7782 Jan  8 17:04 heartbeat.json
[2026-01-08 17:05:18] -rw-------. 1 boinc boinc        95 Jan  8 17:05 pilot_heartbeat.json
[2026-01-08 17:05:18] -rw-------. 1 boinc boinc      4883 Jan  8 17:05 pilotlog.txt
[2026-01-08 17:05:18] -rw-------. 1 boinc boinc   2879894 Jan  8 17:05 log.47898826._019940.job.log.1
[2026-01-08 17:05:18] -rw-r--r--. 1 boinc boinc      8192 Jan  8 17:05 boinc_mmap_file
[2026-01-08 17:05:18] -rw-r--r--. 1 boinc boinc        28 Jan  8 17:05 wrapper_checkpoint.txt
[2026-01-08 17:05:18] -rw-------. 1 boinc boinc       357 Jan  8 17:05 output.list
[2026-01-08 17:05:18] -rw-r--r--. 1 boinc boinc       620 Jan  8 17:05 runtime_log
[2026-01-08 17:05:18] -rw-------. 1 boinc boinc   3450880 Jan  8 17:05 result.tar.gz
[2026-01-08 17:05:18] -rw-r--r--. 1 boinc boinc      8817 Jan  8 17:05 runtime_log.err
[2026-01-08 17:05:18] -rw-------. 1 boinc boinc       657 Jan  8 17:05 0ZzNDmBB0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmyUeKDmhRGjcm.diag
[2026-01-08 17:05:18] -rw-r--r--. 1 boinc boinc     20590 Jan  8 17:05 stderr.txt
[2026-01-08 17:05:18] HITS file was successfully produced:
[2026-01-08 17:05:18] -rw-------. 1 boinc boinc 215942432 Jan  8 17:00 shared/HITS.pool.root.1
[2026-01-08 17:05:18]  *** Contents of shared directory: ***
[2026-01-08 17:05:18] total 436760
[2026-01-08 17:05:18] -rw-r--r--. 2 boinc boinc 227231362 Jan  8 10:57 ATLAS.root_0
[2026-01-08 17:05:18] -rw-r--r--. 2 boinc boinc     15847 Jan  8 10:57 start_atlas.sh
[2026-01-08 17:05:18] -rw-r--r--. 2 boinc boinc    592399 Jan  8 10:57 input.tar.gz
[2026-01-08 17:05:18] -rw-------. 1 boinc boinc 215942432 Jan  8 17:00 HITS.pool.root.1
[2026-01-08 17:05:18] -rw-------. 1 boinc boinc   3450880 Jan  8 17:05 result.tar.gz
17:05:19 (32377): run_atlas exited; CPU time 79082.260570
17:05:19 (32377): called boinc_finish(0)

</stderr_txt>
]]>

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