Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:09:55 (1532984): wrapper (7.7.26015): starting
11:09:55 (1532984): wrapper: running run_atlas (--nthreads 4)
[2026-01-12 11:09:55] Arguments: --nthreads 4
[2026-01-12 11:09:55] Threads: 4
[2026-01-12 11:09:55] Checking for CVMFS
[2026-01-12 11:09:55] No cvmfs_config command found, will try listing directly
[2026-01-12 11:09:55] CVMFS is ok
[2026-01-12 11:09:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 11:09:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 11:09:55] Further information can be found at the LHC@home message board.
[2026-01-12 11:09:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 11:09:55] Checking for apptainer binary...
[2026-01-12 11:09:55] which: no apptainer in ((null))
[2026-01-12 11:09:55] apptainer is not installed, using version from CVMFS
[2026-01-12 11:09:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 11:09:55] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-01-12 11:09:55] apptainer works
[2026-01-12 11:09:55] Set ATHENA_PROC_NUMBER=4
[2026-01-12 11:09:55] Set ATHENA_CORE_NUMBER=4
[2026-01-12 11:09:55] Starting ATLAS job with PandaID=6962917293
[2026-01-12 11:09:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 14:25:47]  *** The last 200 lines of the pilot log: ***
[2026-01-12 14:25:47] 2026-01-12 13:20:25,640 | INFO     | executing command: lscpu
[2026-01-12 14:25:47] 2026-01-12 13:20:25,695 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 14:25:47] 2026-01-12 13:20:25,732 | INFO     | monitor loop #832: job 0:6962917293 is in state 'finished'
[2026-01-12 14:25:47] 2026-01-12 13:20:25,732 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 14:25:47] 2026-01-12 13:20:26,591 | INFO     | time since job start (11418s) is within the limit (174528.0s)
[2026-01-12 14:25:47] 2026-01-12 13:20:28,235 | INFO     | monitor loop #833: job 0:6962917293 is in state 'finished'
[2026-01-12 14:25:47] 2026-01-12 13:20:28,235 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 14:25:47] 2026-01-12 13:20:28,596 | INFO     | time since job start (11420s) is within the limit (174528.0s)
[2026-01-12 14:25:47] 2026-01-12 13:20:29,875 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-12 14:25:47] 2026-01-12 13:20:29,885 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2803.881171875
[2026-01-12 14:25:47] 2026-01-12 13:20:29,897 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6962917293/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 14:25:47] 2026-01-12 13:20:29,897 | INFO     | extracted standard info from prmon json
[2026-01-12 14:25:47] 2026-01-12 13:20:29,897 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 14:25:47] 2026-01-12 13:20:29,898 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 14:25:47] 2026-01-12 13:20:29,898 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 14:25:47] 2026-01-12 13:20:29,898 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 14:25:47] 2026-01-12 13:20:29,902 | INFO     | fitting pss+swap vs Time
[2026-01-12 14:25:47] 2026-01-12 13:20:29,902 | INFO     | sum of square deviations: 2027639878.0
[2026-01-12 14:25:47] 2026-01-12 13:20:29,903 | INFO     | sum of deviations: -4204753851.0000024
[2026-01-12 14:25:47] 2026-01-12 13:20:29,904 | INFO     | mean x: 1768218309.0
[2026-01-12 14:25:47] 2026-01-12 13:20:29,904 | INFO     | mean y: 2396816.0053475937
[2026-01-12 14:25:47] 2026-01-12 13:20:29,904 | INFO     | intersect: 3669183420.888082
[2026-01-12 14:25:47] 2026-01-12 13:20:29,904 | INFO     | chi2: 1.2857920188227487
[2026-01-12 14:25:47] 2026-01-12 13:20:29,904 | INFO     | sum of square deviations: 1869302025.5
[2026-01-12 14:25:47] 2026-01-12 13:20:29,905 | INFO     | sum of deviations: -3660926437.4999976
[2026-01-12 14:25:47] 2026-01-12 13:20:29,906 | INFO     | mean x: 1768218156.5
[2026-01-12 14:25:47] 2026-01-12 13:20:29,906 | INFO     | mean y: 2397340.4340659343
[2026-01-12 14:25:47] 2026-01-12 13:20:29,906 | INFO     | intersect: 3465356513.479887
[2026-01-12 14:25:47] 2026-01-12 13:20:29,906 | INFO     | chi2: 1.2861670588429284
[2026-01-12 14:25:47] 2026-01-12 13:20:29,906 | INFO     | current chi2=1.2861670588429284 (change=-0.02916801587577202 %)
[2026-01-12 14:25:47] 2026-01-12 13:20:29,906 | INFO     | right removable region: 181
[2026-01-12 14:25:47] 2026-01-12 13:20:29,907 | INFO     | sum of square deviations: 1869302025.5
[2026-01-12 14:25:47] 2026-01-12 13:20:29,908 | INFO     | sum of deviations: -25583314295.0
[2026-01-12 14:25:47] 2026-01-12 13:20:29,908 | INFO     | mean x: 1768218461.5
[2026-01-12 14:25:47] 2026-01-12 13:20:29,908 | INFO     | mean y: 2417082.6923076925
[2026-01-12 14:25:47] 2026-01-12 13:20:29,908 | INFO     | intersect: 24202299191.45743
[2026-01-12 14:25:47] 2026-01-12 13:20:29,908 | INFO     | chi2: 0.04867938738542785
[2026-01-12 14:25:47] 2026-01-12 13:20:29,908 | INFO     | current chi2=0.04867938738542785 (change=96.21405432038705 %)
[2026-01-12 14:25:47] 2026-01-12 13:20:29,909 | INFO     | sum of square deviations: 1719429448.0
[2026-01-12 14:25:47] 2026-01-12 13:20:29,910 | INFO     | sum of deviations: -25173025183.999996
[2026-01-12 14:25:47] 2026-01-12 13:20:29,910 | INFO     | mean x: 1768218614.0
[2026-01-12 14:25:47] 2026-01-12 13:20:29,910 | INFO     | mean y: 2416643.4689265536
[2026-01-12 14:25:47] 2026-01-12 13:20:29,910 | INFO     | intersect: 25889731620.43073
[2026-01-12 14:25:47] 2026-01-12 13:20:29,910 | INFO     | chi2: 0.042473716262674946
[2026-01-12 14:25:47] 2026-01-12 13:20:29,910 | INFO     | current chi2=0.042473716262674946 (change=12.748046875812916 %)
[2026-01-12 14:25:47] 2026-01-12 13:20:29,910 | INFO     | left removable region: 20
[2026-01-12 14:25:47] 2026-01-12 13:20:29,911 | INFO     | sum of square deviations: 1294014960.0
[2026-01-12 14:25:47] 2026-01-12 13:20:29,911 | INFO     | sum of deviations: -20244772476.0
[2026-01-12 14:25:47] 2026-01-12 13:20:29,912 | INFO     | mean x: 1768218736.0
[2026-01-12 14:25:47] 2026-01-12 13:20:29,912 | INFO     | mean y: 2413635.4596273294
[2026-01-12 14:25:47] 2026-01-12 13:20:29,912 | INFO     | intersect: 27666070629.13172
[2026-01-12 14:25:47] 2026-01-12 13:20:29,912 | INFO     | chi2: 0.040553304357379166
[2026-01-12 14:25:47] 2026-01-12 13:20:29,912 | INFO     | current memory leak: -15.64 B/s (using 161 data points, chi2=0.04)
[2026-01-12 14:25:47] 2026-01-12 13:20:29,913 | INFO     | could have reported an average CPU frequency of 2705 MHz (10 samples)
[2026-01-12 14:25:47] 2026-01-12 13:20:29,913 | INFO     | ..............................
[2026-01-12 14:25:47] 2026-01-12 13:20:29,913 | INFO     | . Timing measurements:
[2026-01-12 14:25:47] 2026-01-12 13:20:29,913 | INFO     | . get job = 0 s
[2026-01-12 14:25:47] 2026-01-12 13:20:29,913 | INFO     | . initial setup = 1 s
[2026-01-12 14:25:47] 2026-01-12 13:20:29,913 | INFO     | . payload setup = 6 s
[2026-01-12 14:25:47] 2026-01-12 13:20:29,913 | INFO     | . stage-in = 0 s
[2026-01-12 14:25:47] 2026-01-12 13:20:29,913 | INFO     | . payload execution = 11388 s
[2026-01-12 14:25:47] 2026-01-12 13:20:29,913 | INFO     | . stage-out = 1 s
[2026-01-12 14:25:47] 2026-01-12 13:20:29,914 | INFO     | . log creation = 0 s
[2026-01-12 14:25:47] 2026-01-12 13:20:29,914 | INFO     | ..............................
[2026-01-12 14:25:47] 2026-01-12 13:20:30,005 | INFO     | 
[2026-01-12 14:25:47] 2026-01-12 13:20:30,006 | INFO     | job summary report
[2026-01-12 14:25:47] 2026-01-12 13:20:30,006 | INFO     | --------------------------------------------------
[2026-01-12 14:25:47] 2026-01-12 13:20:30,006 | INFO     | PanDA job id: 6962917293
[2026-01-12 14:25:47] 2026-01-12 13:20:30,006 | INFO     | task id: 47898826
[2026-01-12 14:25:47] 2026-01-12 13:20:30,006 | INFO     | errors: (none)
[2026-01-12 14:25:47] 2026-01-12 13:20:30,006 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 14:25:47] 2026-01-12 13:20:30,006 | INFO     | pilot state: finished 
[2026-01-12 14:25:47] 2026-01-12 13:20:30,006 | INFO     | transexitcode: 0
[2026-01-12 14:25:47] 2026-01-12 13:20:30,006 | INFO     | exeerrorcode: 0
[2026-01-12 14:25:47] 2026-01-12 13:20:30,006 | INFO     | exeerrordiag: 
[2026-01-12 14:25:47] 2026-01-12 13:20:30,007 | INFO     | exitcode: 0
[2026-01-12 14:25:47] 2026-01-12 13:20:30,007 | INFO     | exitmsg: OK
[2026-01-12 14:25:47] 2026-01-12 13:20:30,007 | INFO     | cpuconsumptiontime: 44056 s
[2026-01-12 14:25:47] 2026-01-12 13:20:30,007 | INFO     | nevents: 400
[2026-01-12 14:25:47] 2026-01-12 13:20:30,007 | INFO     | neventsw: 0
[2026-01-12 14:25:47] 2026-01-12 13:20:30,007 | INFO     | pid: 1544354
[2026-01-12 14:25:47] 2026-01-12 13:20:30,007 | INFO     | pgrp: 1544354
[2026-01-12 14:25:47] 2026-01-12 13:20:30,007 | INFO     | corecount: 4
[2026-01-12 14:25:47] 2026-01-12 13:20:30,007 | INFO     | event service: False
[2026-01-12 14:25:47] 2026-01-12 13:20:30,007 | INFO     | sizes: {0: 2283980, 1: 2283980, 5: 2284270, 11: 2284326, 11395: 2313706, 11398: 2322726, 11401: 2322910, 11405: 2323104}
[2026-01-12 14:25:47] 2026-01-12 13:20:30,007 | INFO     | --------------------------------------------------
[2026-01-12 14:25:47] 2026-01-12 13:20:30,007 | INFO     | 
[2026-01-12 14:25:47] 2026-01-12 13:20:30,008 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2026-01-12 14:25:47] 2026-01-12 13:20:30,029 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 14:25:47] 2026-01-12 13:20:30,029 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 14:25:47] 2026-01-12 13:20:30,029 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 14:25:47] 2026-01-12 13:20:30,029 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 14:25:47] 2026-01-12 13:20:30,030 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 14:25:47] 2026-01-12 13:20:30,030 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 14:25:47] 2026-01-12 13:20:30,030 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 14:25:47] 2026-01-12 13:20:30,030 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 14:25:47] 2026-01-12 13:20:30,030 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 14:25:47] 2026-01-12 13:20:30,030 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 14:25:47] 2026-01-12 13:20:30,030 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 14:25:47] 2026-01-12 13:20:30,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 14:25:47] 2026-01-12 13:20:30,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 14:25:47] 2026-01-12 13:20:30,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 14:25:47] 2026-01-12 13:20:30,030 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 14:25:47] 2026-01-12 13:20:30,030 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 14:25:47] 2026-01-12 13:20:30,031 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 14:25:47] 2026-01-12 13:20:30,031 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 14:25:47] 2026-01-12 13:20:30,031 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 14:25:47] 2026-01-12 13:20:30,031 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 14:25:47] 2026-01-12 13:20:30,031 | INFO     | job 6962917293 has completed (purged errors)
[2026-01-12 14:25:47] 2026-01-12 13:20:30,031 | INFO     | overall cleanup function is called
[2026-01-12 14:25:47] 2026-01-12 13:20:31,039 | INFO     | --- collectZombieJob: --- 10, [1544354]
[2026-01-12 14:25:47] 2026-01-12 13:20:31,040 | INFO     | zombie collector waiting for pid 1544354
[2026-01-12 14:25:47] 2026-01-12 13:20:31,040 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 14:25:47] 2026-01-12 13:20:31,040 | INFO     | collected zombie processes
[2026-01-12 14:25:47] 2026-01-12 13:20:31,040 | INFO     | will attempt to kill all subprocesses of pid=1544354
[2026-01-12 14:25:47] 2026-01-12 13:20:31,375 | INFO     | process IDs to be killed: [1544354] (in reverse order)
[2026-01-12 14:25:47] 2026-01-12 13:20:31,472 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 14:25:47] 2026-01-12 13:20:31,473 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 14:25:47] 2026-01-12 13:20:31,484 | INFO     | did not find any defunct processes belonging to 1544354
[2026-01-12 14:25:47] 2026-01-12 13:20:31,495 | INFO     | did not find any defunct processes belonging to 1544354
[2026-01-12 14:25:47] 2026-01-12 13:20:31,496 | INFO     | ready for new job
[2026-01-12 14:25:47] 2026-01-12 13:20:31,496 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 14:25:47] 2026-01-12 13:20:31,498 | INFO     | ***************************************
[2026-01-12 14:25:47] 2026-01-12 13:20:31,499 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 14:25:47] 2026-01-12 13:20:31,499 | INFO     | ***************************************
[2026-01-12 14:25:47] 2026-01-12 13:20:31,499 | INFO     | 
[2026-01-12 14:25:47] 2026-01-12 13:20:31,503 | INFO     | architecture information:
[2026-01-12 14:25:47] 2026-01-12 13:20:31,503 | INFO     | executing command: cat /etc/os-release
[2026-01-12 14:25:47] 2026-01-12 13:20:31,519 | INFO     | cat /etc/os-release:
[2026-01-12 14:25:47] NAME="CentOS Linux"
[2026-01-12 14:25:47] VERSION="7 (Core)"
[2026-01-12 14:25:47] ID="centos"
[2026-01-12 14:25:47] ID_LIKE="rhel fedora"
[2026-01-12 14:25:47] VERSION_ID="7"
[2026-01-12 14:25:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 14:25:47] ANSI_COLOR="0;31"
[2026-01-12 14:25:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 14:25:47] HOME_URL="https://www.centos.org/"
[2026-01-12 14:25:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 14:25:47] 
[2026-01-12 14:25:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 14:25:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 14:25:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 14:25:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 14:25:47] 
[2026-01-12 14:25:47] 2026-01-12 13:20:31,520 | INFO     | ***************************************
[2026-01-12 14:25:47] 2026-01-12 13:20:32,023 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2026-01-12 14:25:47] 2026-01-12 13:20:32,040 | INFO     | sufficient remaining disk space (699629830144 B)
[2026-01-12 14:25:47] 2026-01-12 13:20:32,041 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 14:25:47] 2026-01-12 13:20:32,041 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 14:25:47] 2026-01-12 13:20:32,041 | INFO     | update_server=False
[2026-01-12 14:25:47] 2026-01-12 13:20:32,041 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 14:25:47] 2026-01-12 13:20:32,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 14:25:47] 2026-01-12 13:20:32,042 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 14:25:47] 2026-01-12 13:20:32,042 | INFO     | aborting loop
[2026-01-12 14:25:47] 2026-01-12 13:20:32,472 | INFO     | all data control threads have been joined
[2026-01-12 14:25:47] 2026-01-12 13:20:33,005 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 14:25:47] 2026-01-12 13:20:33,047 | INFO     | [job] retrieve thread has finished
[2026-01-12 14:25:47] 2026-01-12 13:20:33,047 | INFO     | [job] job monitor thread has finished
[2026-01-12 14:25:47] 2026-01-12 13:20:33,222 | INFO     | [job] validate thread has finished
[2026-01-12 14:25:47] 2026-01-12 13:20:33,408 | INFO     | all payload control threads have been joined
[2026-01-12 14:25:47] 2026-01-12 13:20:33,477 | INFO     | [data] control thread has finished
[2026-01-12 14:25:47] 2026-01-12 13:20:33,526 | INFO     | all job control threads have been joined
[2026-01-12 14:25:47] 2026-01-12 13:20:33,625 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 14:25:47] 2026-01-12 13:20:33,626 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 14:25:47] 2026-01-12 13:20:33,875 | INFO     | [payload] validate_post thread has finished
[2026-01-12 14:25:47] 2026-01-12 13:20:33,928 | INFO     | [data] copytool_in thread has finished
[2026-01-12 14:25:47] 2026-01-12 13:20:34,211 | INFO     | [payload] failed_post thread has finished
[2026-01-12 14:25:47] 2026-01-12 13:20:34,413 | INFO     | [payload] control thread has finished
[2026-01-12 14:25:47] 2026-01-12 13:20:34,486 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 14:25:47] 2026-01-12 13:20:34,531 | INFO     | [job] control thread has finished
[2026-01-12 14:25:47] 2026-01-12 13:20:35,011 | INFO     | [data] copytool_out thread has finished
[2026-01-12 14:25:47] 2026-01-12 13:20:35,016 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 14:25:47] 2026-01-12 13:20:36,021 | INFO     | [job] queue monitor thread has finished
[2026-01-12 14:25:47] 2026-01-12 13:20:36,048 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 14:25:47] 2026-01-12 13:20:43,040 | INFO     | job.realtimelogging is not enabled
[2026-01-12 14:25:47] 2026-01-12 13:20:44,045 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 14:25:47] 2026-01-12 13:21:02,111 | INFO     | PID=1537310 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 14:25:47] 2026-01-12 13:21:02,113 | INFO     | .. there are 2 such processes running
[2026-01-12 14:25:47] 2026-01-12 13:21:02,113 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 14:25:47] 2026-01-12 13:21:02,113 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 14:25:47] 2026-01-12 13:21:02,113 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 14:25:47] 2026-01-12 13:21:25,294 | INFO     | [monitor] cgroup control has ended
[2026-01-12 14:25:47] 2026-01-12 13:21:26,119 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22598002251584)>', '<ExcThread(monitor, started 22597559367424)>']
[2026-01-12 14:25:47] 2026-01-12 13:21:26,234 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 14:25:47] 2026-01-12 13:21:26,234 | INFO     | [monitor] control thread has ended
[2026-01-12 14:25:47] 2026-01-12 13:21:31,144 | INFO     | all workflow threads have been joined
[2026-01-12 14:25:47] 2026-01-12 13:21:31,144 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 14:25:47] 2026-01-12 13:21:31,144 | INFO     | traces error code: 0
[2026-01-12 14:25:47] 2026-01-12 13:21:31,145 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 14:25:47] 2026-01-12 13:21:31,288 [wrapper] ==== pilot stdout END ====
[2026-01-12 14:25:47] 2026-01-12 13:21:31,292 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 14:25:47] 2026-01-12 13:21:31,294 [wrapper] pilotpid: 1537310
[2026-01-12 14:25:47] 2026-01-12 13:21:31,297 [wrapper] Pilot exit status: 0
[2026-01-12 14:25:47] 2026-01-12 13:21:31,307 [wrapper] pandaids: 6962917293
[2026-01-12 14:25:47] 2026-01-12 13:21:31,375 [wrapper] cleanup supervisor_pilot 1643817 1537311
[2026-01-12 14:25:47] 2026-01-12 13:21:31,377 [wrapper] Test setup, not cleaning
[2026-01-12 14:25:47] 2026-01-12 13:21:31,380 [wrapper] apfmon messages muted
[2026-01-12 14:25:47] 2026-01-12 13:21:31,382 [wrapper] ==== wrapper stdout END ====
[2026-01-12 14:25:47] 2026-01-12 13:21:31,385 [wrapper] ==== wrapper stderr END ====
[2026-01-12 14:25:47]  *** Error codes and diagnostics ***
[2026-01-12 14:25:47]     "exeErrorCode": 0,
[2026-01-12 14:25:47]     "exeErrorDiag": "",
[2026-01-12 14:25:47]     "pilotErrorCode": 0,
[2026-01-12 14:25:47]     "pilotErrorDiag": "",
[2026-01-12 14:25:47]  *** Listing of results directory ***
[2026-01-12 14:25:47] total 433440
[2026-01-12 14:25:47] -rw-r--r-- 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-12 14:25:47] -rwx------ 1 boinc boinc     36322 Jan  8 09:03 runpilot2-wrapper.sh
[2026-01-12 14:25:47] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:07 queuedata.json
[2026-01-12 14:25:47] -rw-r--r-- 1 boinc boinc       100 Jan 12 11:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 14:25:47] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 11:05 run_atlas
[2026-01-12 14:25:47] -rw-r--r-- 1 boinc boinc       105 Jan 12 11:05 job.xml
[2026-01-12 14:25:47] -rw-r--r-- 2 boinc boinc 224138198 Jan 12 11:09 EVNT.47898824._000642.pool.root.1
[2026-01-12 14:25:47] -rw-r--r-- 1 boinc boinc      6637 Jan 12 11:09 init_data.xml
[2026-01-12 14:25:47] drwxrwx--x 2 boinc boinc      4096 Jan 12 11:09 shared
[2026-01-12 14:25:47] -rw-r--r-- 2 boinc boinc    592397 Jan 12 11:09 input.tar.gz
[2026-01-12 14:25:47] -rw-r--r-- 2 boinc boinc     15847 Jan 12 11:09 start_atlas.sh
[2026-01-12 14:25:47] -rw-r--r-- 1 boinc boinc         0 Jan 12 11:09 boinc_lockfile
[2026-01-12 14:25:47] -rw-r--r-- 1 boinc boinc      2519 Jan 12 11:09 pandaJob.out
[2026-01-12 14:25:47] -rw------- 1 boinc boinc    987688 Jan 12 11:10 agis_schedconf.cvmfs.json
[2026-01-12 14:25:47] drwx------ 5 boinc boinc      4096 Jan 12 11:10 pilot3
[2026-01-12 14:25:47] -rw------- 1 boinc boinc 211796419 Jan 12 14:19 HITS.47898826._019493.pool.root.1
[2026-01-12 14:25:47] -rw-r--r-- 1 boinc boinc       528 Jan 12 14:19 boinc_task_state.xml
[2026-01-12 14:25:47] -rw------- 1 boinc boinc      1032 Jan 12 14:20 memory_monitor_summary.json
[2026-01-12 14:25:47] -rw------- 1 boinc boinc   1516240 Jan 12 14:20 agis_ddmendpoints.agis.ALL.json
[2026-01-12 14:25:47] -rw------- 1 boinc boinc    372486 Jan 12 14:20 log.47898826._019493.job.log.tgz.1
[2026-01-12 14:25:47] -rw------- 1 boinc boinc        95 Jan 12 14:20 pilot_heartbeat.json
[2026-01-12 14:25:47] -rw------- 1 boinc boinc      7833 Jan 12 14:20 heartbeat.json
[2026-01-12 14:25:47] -rw------- 1 boinc boinc      4905 Jan 12 14:21 pilotlog.txt
[2026-01-12 14:25:47] -rw------- 1 boinc boinc   1620556 Jan 12 14:21 log.47898826._019493.job.log.1
[2026-01-12 14:25:47] -rw------- 1 boinc boinc       357 Jan 12 14:21 output.list
[2026-01-12 14:25:47] -rw-r--r-- 1 boinc boinc       620 Jan 12 14:21 runtime_log
[2026-01-12 14:25:47] -rw------- 1 boinc boinc   2017280 Jan 12 14:21 result.tar.gz
[2026-01-12 14:25:47] -rw-r--r-- 1 boinc boinc      9206 Jan 12 14:21 runtime_log.err
[2026-01-12 14:25:47] -rw------- 1 boinc boinc       665 Jan 12 14:21 hGKKDm0A0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnSeKDmXOlsMn.diag
[2026-01-12 14:25:47] -rw-r--r-- 1 boinc boinc        26 Jan 12 14:25 wrapper_checkpoint.txt
[2026-01-12 14:25:47] -rw-r--r-- 1 boinc boinc      8192 Jan 12 14:25 boinc_mmap_file
[2026-01-12 14:25:47] -rw-r--r-- 1 boinc boinc     21164 Jan 12 14:25 stderr.txt
[2026-01-12 14:25:47] HITS file was successfully produced:
[2026-01-12 14:25:47] -rw------- 1 boinc boinc 211796419 Jan 12 14:19 shared/HITS.pool.root.1
[2026-01-12 14:25:47]  *** Contents of shared directory: ***
[2026-01-12 14:25:47] total 428300
[2026-01-12 14:25:47] -rw-r--r-- 2 boinc boinc 224138198 Jan 12 11:09 ATLAS.root_0
[2026-01-12 14:25:47] -rw-r--r-- 2 boinc boinc    592397 Jan 12 11:09 input.tar.gz
[2026-01-12 14:25:47] -rw-r--r-- 2 boinc boinc     15847 Jan 12 11:09 start_atlas.sh
[2026-01-12 14:25:47] -rw------- 1 boinc boinc 211796419 Jan 12 14:19 HITS.pool.root.1
[2026-01-12 14:25:47] -rw------- 1 boinc boinc   2017280 Jan 12 14:21 result.tar.gz
14:25:49 (1532984): run_atlas exited; CPU time 44559.122414
14:25:49 (1532984): called boinc_finish(0)

</stderr_txt>
]]>

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