Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:05:34 (10077): wrapper (7.7.26015): starting
18:05:34 (10077): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 18:05:34] Arguments: --nthreads 8
[2026-01-08 18:05:34] Threads: 8
[2026-01-08 18:05:34] Checking for CVMFS
[2026-01-08 18:05:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 18:05:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 18:05:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 18:05:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 18:05:37] 2.11.2.0 32220 34253 97524 154914 3 60 16926970 25165825 96 130560 0 14839460 99.808 9260238 3999 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 18:05:37] CVMFS is ok
[2026-01-08 18:05:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 18:05:38] Checking for apptainer binary...
[2026-01-08 18:05:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 18:05:38] Running /usr/bin/apptainer --version
[2026-01-08 18:05:38] apptainer version 1.3.2-1.el7
[2026-01-08 18:05:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 18:05:46] cg-vwn447.simple-grid.lan
[2026-01-08 18:05:46] apptainer works
[2026-01-08 18:05:46] Set ATHENA_PROC_NUMBER=8
[2026-01-08 18:05:46] Set ATHENA_CORE_NUMBER=8
[2026-01-08 18:05:46] Starting ATLAS job with PandaID=6962916430
[2026-01-08 18:05:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 00:14:02]  *** The last 200 lines of the pilot log: ***
[2026-01-09 00:14:02] 2026-01-08 23:13:03,197 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 00:14:02] 2026-01-08 23:13:03,198 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 00:14:02] 2026-01-08 23:13:03,200 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6962916430/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 00:14:02] 2026-01-08 23:13:03,201 | INFO     | extracted standard info from prmon json
[2026-01-09 00:14:02] 2026-01-08 23:13:03,201 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 00:14:02] 2026-01-08 23:13:03,201 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 00:14:02] 2026-01-08 23:13:03,201 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 00:14:02] 2026-01-08 23:13:03,201 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 00:14:02] 2026-01-08 23:13:03,209 | INFO     | fitting pss+swap vs Time
[2026-01-09 00:14:02] 2026-01-08 23:13:03,210 | INFO     | sum of square deviations: 12844082682.5
[2026-01-09 00:14:02] 2026-01-08 23:13:03,214 | INFO     | sum of deviations: 78012789711.99998
[2026-01-09 00:14:02] 2026-01-08 23:13:03,217 | INFO     | mean x: 1767903280.5
[2026-01-09 00:14:02] 2026-01-08 23:13:03,218 | INFO     | mean y: 2485953.7283236994
[2026-01-09 00:14:02] 2026-01-08 23:13:03,218 | INFO     | intersect: -10735460092.09677
[2026-01-09 00:14:02] 2026-01-08 23:13:03,218 | INFO     | chi2: 7.022213504065466
[2026-01-09 00:14:02] 2026-01-08 23:13:03,219 | INFO     | sum of square deviations: 12295263090.0
[2026-01-09 00:14:02] 2026-01-08 23:13:03,223 | INFO     | sum of deviations: 100180448230.00003
[2026-01-09 00:14:02] 2026-01-08 23:13:03,227 | INFO     | mean x: 1767903128.0
[2026-01-09 00:14:02] 2026-01-08 23:13:03,227 | INFO     | mean y: 2492038.9413489737
[2026-01-09 00:14:02] 2026-01-08 23:13:03,227 | INFO     | intersect: -14402187754.718855
[2026-01-09 00:14:02] 2026-01-08 23:13:03,227 | INFO     | chi2: 6.297560835260877
[2026-01-09 00:14:02] 2026-01-08 23:13:03,228 | INFO     | current chi2=6.297560835260877 (change=10.319433728197746 %)
[2026-01-09 00:14:02] 2026-01-08 23:13:03,228 | INFO     | right removable region: 340
[2026-01-09 00:14:02] 2026-01-08 23:13:03,228 | INFO     | sum of square deviations: 12295263090.0
[2026-01-09 00:14:02] 2026-01-08 23:13:03,232 | INFO     | sum of deviations: -40717325540.000015
[2026-01-09 00:14:02] 2026-01-08 23:13:03,233 | INFO     | mean x: 1767903433.0
[2026-01-09 00:14:02] 2026-01-08 23:13:03,233 | INFO     | mean y: 2518925.8269794723
[2026-01-09 00:14:02] 2026-01-08 23:13:03,233 | INFO     | intersect: 5857155713.8182
[2026-01-09 00:14:02] 2026-01-08 23:13:03,233 | INFO     | chi2: 2.5424819150978135
[2026-01-09 00:14:02] 2026-01-08 23:13:03,234 | INFO     | current chi2=2.5424819150978135 (change=63.79372524595187 %)
[2026-01-09 00:14:02] 2026-01-08 23:13:03,234 | INFO     | sum of square deviations: 11762304260.0
[2026-01-09 00:14:02] 2026-01-08 23:13:03,238 | INFO     | sum of deviations: -102293886285.50002
[2026-01-09 00:14:02] 2026-01-08 23:13:03,238 | INFO     | mean x: 1767903585.5
[2026-01-09 00:14:02] 2026-01-08 23:13:03,238 | INFO     | mean y: 2536475.098214286
[2026-01-09 00:14:02] 2026-01-08 23:13:03,239 | INFO     | intersect: 15377562009.326725
[2026-01-09 00:14:02] 2026-01-08 23:13:03,239 | INFO     | chi2: 1.0781248241929582
[2026-01-09 00:14:02] 2026-01-08 23:13:03,239 | INFO     | current chi2=1.0781248241929582 (change=57.59557549688683 %)
[2026-01-09 00:14:02] 2026-01-08 23:13:03,240 | INFO     | sum of square deviations: 11244973630.0
[2026-01-09 00:14:02] 2026-01-08 23:13:03,244 | INFO     | sum of deviations: -107152872426.0
[2026-01-09 00:14:02] 2026-01-08 23:13:03,244 | INFO     | mean x: 1767903738.0
[2026-01-09 00:14:02] 2026-01-08 23:13:03,244 | INFO     | mean y: 2537891.924471299
[2026-01-09 00:14:02] 2026-01-08 23:13:03,244 | INFO     | intersect: 16848816943.568857
[2026-01-09 00:14:02] 2026-01-08 23:13:03,245 | INFO     | chi2: 1.0410937482349842
[2026-01-09 00:14:02] 2026-01-08 23:13:03,245 | INFO     | current chi2=1.0410937482349842 (change=3.434767025765681 %)
[2026-01-09 00:14:02] 2026-01-08 23:13:03,245 | INFO     | left removable region: 30
[2026-01-09 00:14:02] 2026-01-08 23:13:03,246 | INFO     | sum of square deviations: 9237596457.5
[2026-01-09 00:14:02] 2026-01-08 23:13:03,249 | INFO     | sum of deviations: -54671239477.5
[2026-01-09 00:14:02] 2026-01-08 23:13:03,249 | INFO     | mean x: 1767904012.5
[2026-01-09 00:14:02] 2026-01-08 23:13:03,249 | INFO     | mean y: 2535883.5387096773
[2026-01-09 00:14:02] 2026-01-08 23:13:03,250 | INFO     | intersect: 10465593464.07934
[2026-01-09 00:14:02] 2026-01-08 23:13:03,250 | INFO     | chi2: 0.22392458996457193
[2026-01-09 00:14:02] 2026-01-08 23:13:03,250 | INFO     | current memory leak: -5.92 B/s (using 310 data points, chi2=0.22)
[2026-01-09 00:14:02] 2026-01-08 23:13:03,251 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-09 00:14:02] 2026-01-08 23:13:03,251 | INFO     | ..............................
[2026-01-09 00:14:02] 2026-01-08 23:13:03,252 | INFO     | . Timing measurements:
[2026-01-09 00:14:02] 2026-01-08 23:13:03,252 | INFO     | . get job = 0 s
[2026-01-09 00:14:02] 2026-01-08 23:13:03,252 | INFO     | . initial setup = 19 s
[2026-01-09 00:14:02] 2026-01-08 23:13:03,252 | INFO     | . payload setup = 163 s
[2026-01-09 00:14:02] 2026-01-08 23:13:03,252 | INFO     | . stage-in = 0 s
[2026-01-09 00:14:02] 2026-01-08 23:13:03,252 | INFO     | . payload execution = 21263 s
[2026-01-09 00:14:02] 2026-01-08 23:13:03,252 | INFO     | . stage-out = 4 s
[2026-01-09 00:14:02] 2026-01-08 23:13:03,252 | INFO     | . log creation = 1 s
[2026-01-09 00:14:02] 2026-01-08 23:13:03,252 | INFO     | ..............................
[2026-01-09 00:14:02] 2026-01-08 23:13:03,306 | INFO     | time since job start (21768s) is within the limit (174528.0s)
[2026-01-09 00:14:02] 2026-01-08 23:13:03,376 | INFO     | 
[2026-01-09 00:14:02] 2026-01-08 23:13:03,376 | INFO     | job summary report
[2026-01-09 00:14:02] 2026-01-08 23:13:03,376 | INFO     | --------------------------------------------------
[2026-01-09 00:14:02] 2026-01-08 23:13:03,376 | INFO     | PanDA job id: 6962916430
[2026-01-09 00:14:02] 2026-01-08 23:13:03,377 | INFO     | task id: 47898826
[2026-01-09 00:14:02] 2026-01-08 23:13:03,377 | INFO     | errors: (none)
[2026-01-09 00:14:02] 2026-01-08 23:13:03,377 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 00:14:02] 2026-01-08 23:13:03,377 | INFO     | pilot state: finished 
[2026-01-09 00:14:02] 2026-01-08 23:13:03,377 | INFO     | transexitcode: 0
[2026-01-09 00:14:02] 2026-01-08 23:13:03,377 | INFO     | exeerrorcode: 0
[2026-01-09 00:14:02] 2026-01-08 23:13:03,377 | INFO     | exeerrordiag: 
[2026-01-09 00:14:02] 2026-01-08 23:13:03,377 | INFO     | exitcode: 0
[2026-01-09 00:14:02] 2026-01-08 23:13:03,377 | INFO     | exitmsg: OK
[2026-01-09 00:14:02] 2026-01-08 23:13:03,377 | INFO     | cpuconsumptiontime: 80472 s
[2026-01-09 00:14:02] 2026-01-08 23:13:03,377 | INFO     | nevents: 400
[2026-01-09 00:14:02] 2026-01-08 23:13:03,377 | INFO     | neventsw: 0
[2026-01-09 00:14:02] 2026-01-08 23:13:03,378 | INFO     | pid: 20255
[2026-01-09 00:14:02] 2026-01-08 23:13:03,378 | INFO     | pgrp: 20255
[2026-01-09 00:14:02] 2026-01-08 23:13:03,378 | INFO     | corecount: 8
[2026-01-09 00:14:02] 2026-01-08 23:13:03,378 | INFO     | event service: False
[2026-01-09 00:14:02] 2026-01-08 23:13:03,378 | INFO     | sizes: {0: 2283739, 1: 2283994, 12: 2283994, 23: 2284022, 33: 2284050, 44: 2284106, 55: 2284262, 66: 2284290, 76: 2284318, 87: 2284374, 98: 2284402, 103: 2284972, 
[2026-01-09 00:14:02] 2026-01-08 23:13:03,378 | INFO     | --------------------------------------------------
[2026-01-09 00:14:02] 2026-01-08 23:13:03,378 | INFO     | 
[2026-01-09 00:14:02] 2026-01-08 23:13:03,378 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-09 00:14:02] 2026-01-08 23:13:03,514 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 00:14:02] 2026-01-08 23:13:03,514 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 00:14:02] 2026-01-08 23:13:03,514 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 00:14:02] 2026-01-08 23:13:03,515 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 00:14:02] 2026-01-08 23:13:03,515 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 00:14:02] 2026-01-08 23:13:03,515 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 00:14:02] 2026-01-08 23:13:03,515 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 00:14:02] 2026-01-08 23:13:03,515 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 00:14:02] 2026-01-08 23:13:03,515 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 00:14:02] 2026-01-08 23:13:03,515 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 00:14:02] 2026-01-08 23:13:03,515 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 00:14:02] 2026-01-08 23:13:03,515 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 00:14:02] 2026-01-08 23:13:03,515 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 00:14:02] 2026-01-08 23:13:03,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 00:14:02] 2026-01-08 23:13:03,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 00:14:02] 2026-01-08 23:13:03,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 00:14:02] 2026-01-08 23:13:03,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 00:14:02] 2026-01-08 23:13:03,516 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 00:14:02] 2026-01-08 23:13:03,516 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 00:14:02] 2026-01-08 23:13:03,516 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 00:14:02] 2026-01-08 23:13:03,516 | INFO     | job 6962916430 has completed (purged errors)
[2026-01-09 00:14:02] 2026-01-08 23:13:03,516 | INFO     | overall cleanup function is called
[2026-01-09 00:14:02] 2026-01-08 23:13:04,525 | INFO     | --- collectZombieJob: --- 10, [20255]
[2026-01-09 00:14:02] 2026-01-08 23:13:04,526 | INFO     | zombie collector waiting for pid 20255
[2026-01-09 00:14:02] 2026-01-08 23:13:04,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 00:14:02] 2026-01-08 23:13:04,526 | INFO     | collected zombie processes
[2026-01-09 00:14:02] 2026-01-08 23:13:04,526 | INFO     | will attempt to kill all subprocesses of pid=20255
[2026-01-09 00:14:02] 2026-01-08 23:13:04,593 | INFO     | process IDs to be killed: [20255] (in reverse order)
[2026-01-09 00:14:02] 2026-01-08 23:13:05,137 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 00:14:02] 2026-01-08 23:13:05,137 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 00:14:02] 2026-01-08 23:13:05,140 | INFO     | did not find any defunct processes belonging to 20255
[2026-01-09 00:14:02] 2026-01-08 23:13:05,142 | INFO     | did not find any defunct processes belonging to 20255
[2026-01-09 00:14:02] 2026-01-08 23:13:05,142 | INFO     | ready for new job
[2026-01-09 00:14:02] 2026-01-08 23:13:05,142 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 00:14:02] 2026-01-08 23:13:05,144 | INFO     | ***************************************
[2026-01-09 00:14:02] 2026-01-08 23:13:05,145 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 00:14:02] 2026-01-08 23:13:05,145 | INFO     | ***************************************
[2026-01-09 00:14:02] 2026-01-08 23:13:05,145 | INFO     | 
[2026-01-09 00:14:02] 2026-01-08 23:13:05,146 | INFO     | pilot is running in a VM
[2026-01-09 00:14:02] 2026-01-08 23:13:05,146 | INFO     | architecture information:
[2026-01-09 00:14:02] 2026-01-08 23:13:05,155 | INFO     | executing command: cat /etc/os-release
[2026-01-09 00:14:02] 2026-01-08 23:13:05,381 | INFO     | cat /etc/os-release:
[2026-01-09 00:14:02] NAME="CentOS Linux"
[2026-01-09 00:14:02] VERSION="7 (Core)"
[2026-01-09 00:14:02] ID="centos"
[2026-01-09 00:14:02] ID_LIKE="rhel fedora"
[2026-01-09 00:14:02] VERSION_ID="7"
[2026-01-09 00:14:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 00:14:02] ANSI_COLOR="0;31"
[2026-01-09 00:14:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 00:14:02] HOME_URL="https://www.centos.org/"
[2026-01-09 00:14:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 00:14:02] 
[2026-01-09 00:14:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 00:14:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 00:14:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 00:14:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 00:14:02] 
[2026-01-09 00:14:02] 2026-01-08 23:13:05,381 | INFO     | ***************************************
[2026-01-09 00:14:02] 2026-01-08 23:13:05,885 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-09 00:14:02] 2026-01-08 23:13:06,130 | INFO     | sufficient remaining disk space (497113104384 B)
[2026-01-09 00:14:02] 2026-01-08 23:13:06,130 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 00:14:02] 2026-01-08 23:13:06,131 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 00:14:02] 2026-01-08 23:13:06,131 | INFO     | update_server=False
[2026-01-09 00:14:02] 2026-01-08 23:13:06,131 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 00:14:02] 2026-01-08 23:13:06,626 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 00:14:02] 2026-01-08 23:13:06,627 | INFO     | aborting loop
[2026-01-09 00:14:02] 2026-01-08 23:13:06,832 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 00:14:02] 2026-01-08 23:13:06,940 | INFO     | all data control threads have been joined
[2026-01-09 00:14:02] 2026-01-08 23:13:06,986 | INFO     | all job control threads have been joined
[2026-01-09 00:14:02] 2026-01-08 23:13:07,140 | INFO     | [job] retrieve thread has finished
[2026-01-09 00:14:02] 2026-01-08 23:13:07,481 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 00:14:02] 2026-01-08 23:13:07,610 | INFO     | [payload] failed_post thread has finished
[2026-01-09 00:14:02] 2026-01-08 23:13:07,627 | INFO     | all payload control threads have been joined
[2026-01-09 00:14:02] 2026-01-08 23:13:07,632 | INFO     | [job] job monitor thread has finished
[2026-01-09 00:14:02] 2026-01-08 23:13:07,881 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 00:14:02] 2026-01-08 23:13:07,946 | INFO     | [data] control thread has finished
[2026-01-09 00:14:02] 2026-01-08 23:13:07,954 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 00:14:02] 2026-01-08 23:13:07,992 | INFO     | [job] control thread has finished
[2026-01-09 00:14:02] 2026-01-08 23:13:08,015 | INFO     | [data] copytool_in thread has finished
[2026-01-09 00:14:02] 2026-01-08 23:13:08,276 | INFO     | [job] validate thread has finished
[2026-01-09 00:14:02] 2026-01-08 23:13:08,288 | INFO     | [payload] validate_post thread has finished
[2026-01-09 00:14:02] 2026-01-08 23:13:08,389 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 00:14:02] 2026-01-08 23:13:08,612 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 00:14:02] 2026-01-08 23:13:08,633 | INFO     | [payload] control thread has finished
[2026-01-09 00:14:02] 2026-01-08 23:13:08,839 | INFO     | [data] copytool_out thread has finished
[2026-01-09 00:14:02] 2026-01-08 23:13:09,395 | INFO     | [job] queue monitor thread has finished
[2026-01-09 00:14:02] 2026-01-08 23:13:09,396 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 00:14:02] 2026-01-08 23:13:13,405 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 00:14:02] 2026-01-08 23:13:36,434 | INFO     | PID=13808 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 00:14:02] 2026-01-08 23:13:36,434 | INFO     | .. there are 2 such processes running
[2026-01-09 00:14:02] 2026-01-08 23:13:36,436 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 00:14:02] 2026-01-08 23:13:36,436 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 00:14:02] 2026-01-08 23:13:36,436 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 00:14:02] 2026-01-08 23:13:52,693 | INFO     | [monitor] cgroup control has ended
[2026-01-09 00:14:02] 2026-01-08 23:13:53,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140639177946944)>', '<ExcThread(monitor, started 140638746035968)>']
[2026-01-09 00:14:02] 2026-01-08 23:13:53,537 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 00:14:02] 2026-01-08 23:13:53,538 | INFO     | [monitor] control thread has ended
[2026-01-09 00:14:02] 2026-01-08 23:13:58,423 | INFO     | all workflow threads have been joined
[2026-01-09 00:14:02] 2026-01-08 23:13:58,424 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 00:14:02] 2026-01-08 23:13:58,424 | INFO     | traces error code: 0
[2026-01-09 00:14:02] 2026-01-08 23:13:58,424 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 00:14:02] 2026-01-08 23:13:58,837 [wrapper] ==== pilot stdout END ====
[2026-01-09 00:14:02] 2026-01-08 23:13:58,977 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 00:14:02] 2026-01-08 23:13:59,094 [wrapper] pilotpid: 13808
[2026-01-09 00:14:02] 2026-01-08 23:13:59,185 [wrapper] Pilot exit status: 0
[2026-01-09 00:14:02] 2026-01-08 23:13:59,767 [wrapper] pandaids: 6962916430
[2026-01-09 00:14:02] 2026-01-08 23:14:00,918 [wrapper] cleanup supervisor_pilot 19545 13809
[2026-01-09 00:14:02] 2026-01-08 23:14:01,038 [wrapper] Test setup, not cleaning
[2026-01-09 00:14:02] 2026-01-08 23:14:01,137 [wrapper] apfmon messages muted
[2026-01-09 00:14:02] 2026-01-08 23:14:01,250 [wrapper] ==== wrapper stdout END ====
[2026-01-09 00:14:02] 2026-01-08 23:14:01,304 [wrapper] ==== wrapper stderr END ====
[2026-01-09 00:14:02]  *** Error codes and diagnostics ***
[2026-01-09 00:14:02]     "exeErrorCode": 0,
[2026-01-09 00:14:02]     "exeErrorDiag": "",
[2026-01-09 00:14:02]     "pilotErrorCode": 0,
[2026-01-09 00:14:02]     "pilotErrorDiag": "",
[2026-01-09 00:14:02]  *** Listing of results directory ***
[2026-01-09 00:14:02] total 451148
[2026-01-09 00:14:02] -rw-r--r--. 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-09 00:14:02] -rwx------. 1 boinc boinc     36322 Jan  8 09:03 runpilot2-wrapper.sh
[2026-01-09 00:14:02] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:05 queuedata.json
[2026-01-09 00:14:02] -rw-r--r--. 1 boinc boinc       100 Jan  8 18:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 00:14:02] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 18:05 run_atlas
[2026-01-09 00:14:02] -rw-r--r--. 1 boinc boinc       105 Jan  8 18:05 job.xml
[2026-01-09 00:14:02] -rw-r--r--. 1 boinc boinc      6388 Jan  8 18:05 init_data.xml
[2026-01-09 00:14:02] -rw-r--r--. 2 boinc boinc 228356966 Jan  8 18:05 EVNT.47898824._000623.pool.root.1
[2026-01-09 00:14:02] -rw-r--r--. 2 boinc boinc     15847 Jan  8 18:05 start_atlas.sh
[2026-01-09 00:14:02] drwxrwx--x. 2 boinc boinc        68 Jan  8 18:05 shared
[2026-01-09 00:14:02] -rw-r--r--. 2 boinc boinc    592395 Jan  8 18:05 input.tar.gz
[2026-01-09 00:14:02] -rw-r--r--. 1 boinc boinc         0 Jan  8 18:05 boinc_lockfile
[2026-01-09 00:14:02] -rw-r--r--. 1 boinc boinc      2517 Jan  8 18:05 pandaJob.out
[2026-01-09 00:14:02] -rw-------. 1 boinc boinc    989837 Jan  8 18:10 agis_schedconf.cvmfs.json
[2026-01-09 00:14:02] drwx------. 5 boinc boinc      4096 Jan  8 18:10 pilot3
[2026-01-09 00:14:02] -rw-------. 1 boinc boinc 222851799 Jan  9 00:09 HITS.47898826._019002.pool.root.1
[2026-01-09 00:14:02] -rw-r--r--. 1 boinc boinc       531 Jan  9 00:09 boinc_task_state.xml
[2026-01-09 00:14:02] -rw-------. 1 boinc boinc      1015 Jan  9 00:10 memory_monitor_summary.json
[2026-01-09 00:14:02] -rw-------. 1 boinc boinc   1516240 Jan  9 00:11 agis_ddmendpoints.agis.ALL.json
[2026-01-09 00:14:02] -rw-------. 1 boinc boinc    539916 Jan  9 00:11 log.47898826._019002.job.log.tgz.1
[2026-01-09 00:14:02] -rw-------. 1 boinc boinc      7780 Jan  9 00:13 heartbeat.json
[2026-01-09 00:14:02] -rw-------. 1 boinc boinc        95 Jan  9 00:13 pilot_heartbeat.json
[2026-01-09 00:14:02] -rw-------. 1 boinc boinc      4884 Jan  9 00:13 pilotlog.txt
[2026-01-09 00:14:02] -rw-r--r--. 1 boinc boinc      8192 Jan  9 00:14 boinc_mmap_file
[2026-01-09 00:14:02] -rw-r--r--. 1 boinc boinc        28 Jan  9 00:14 wrapper_checkpoint.txt
[2026-01-09 00:14:02] -rw-------. 1 boinc boinc   2889447 Jan  9 00:14 log.47898826._019002.job.log.1
[2026-01-09 00:14:02] -rw-------. 1 boinc boinc       357 Jan  9 00:14 output.list
[2026-01-09 00:14:02] -rw-r--r--. 1 boinc boinc       620 Jan  9 00:14 runtime_log
[2026-01-09 00:14:02] -rw-------. 1 boinc boinc   3450880 Jan  9 00:14 result.tar.gz
[2026-01-09 00:14:02] -rw-r--r--. 1 boinc boinc      8817 Jan  9 00:14 runtime_log.err
[2026-01-09 00:14:02] -rw-------. 1 boinc boinc       657 Jan  9 00:14 5YALDmRA0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4ReKDmmOaHVn.diag
[2026-01-09 00:14:02] -rw-r--r--. 1 boinc boinc     20779 Jan  9 00:14 stderr.txt
[2026-01-09 00:14:02] HITS file was successfully produced:
[2026-01-09 00:14:02] -rw-------. 1 boinc boinc 222851799 Jan  9 00:09 shared/HITS.pool.root.1
[2026-01-09 00:14:02]  *** Contents of shared directory: ***
[2026-01-09 00:14:02] total 444608
[2026-01-09 00:14:02] -rw-r--r--. 2 boinc boinc 228356966 Jan  8 18:05 ATLAS.root_0
[2026-01-09 00:14:02] -rw-r--r--. 2 boinc boinc     15847 Jan  8 18:05 start_atlas.sh
[2026-01-09 00:14:02] -rw-r--r--. 2 boinc boinc    592395 Jan  8 18:05 input.tar.gz
[2026-01-09 00:14:02] -rw-------. 1 boinc boinc 222851799 Jan  9 00:09 HITS.pool.root.1
[2026-01-09 00:14:02] -rw-------. 1 boinc boinc   3450880 Jan  9 00:14 result.tar.gz
00:14:04 (10077): run_atlas exited; CPU time 80695.985314
00:14:04 (10077): called boinc_finish(0)

</stderr_txt>
]]>

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