Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:41:41 (9307): wrapper (7.7.26015): starting
15:41:41 (9307): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 15:41:41] Arguments: --nthreads 8
[2026-01-08 15:41:41] Threads: 8
[2026-01-08 15:41:41] Checking for CVMFS
[2026-01-08 15:41:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 15:41:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 15:41:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 15:41:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 15:41:45] 2.11.2.0 28634 34108 98248 154910 2 60 15960124 25165824 96 130560 0 6888386 99.627 10283035 2640 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 15:41:45] CVMFS is ok
[2026-01-08 15:41:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 15:41:45] Checking for apptainer binary...
[2026-01-08 15:41:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 15:41:45] Running /usr/bin/apptainer --version
[2026-01-08 15:41:45] apptainer version 1.3.2-1.el7
[2026-01-08 15:41:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 15:42:07] cg-vwn465.simple-grid.lan
[2026-01-08 15:42:07] apptainer works
[2026-01-08 15:42:07] Set ATHENA_PROC_NUMBER=8
[2026-01-08 15:42:07] Set ATHENA_CORE_NUMBER=8
[2026-01-08 15:42:07] Starting ATLAS job with PandaID=6962916021
[2026-01-08 15:42:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 21:25:54]  *** The last 200 lines of the pilot log: ***
[2026-01-08 21:25:54] 2026-01-08 20:24:59,101 | INFO     | extracted standard info from prmon json
[2026-01-08 21:25:54] 2026-01-08 20:24:59,101 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 21:25:54] 2026-01-08 20:24:59,101 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 21:25:54] 2026-01-08 20:24:59,101 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 21:25:54] 2026-01-08 20:24:59,101 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 21:25:54] 2026-01-08 20:24:59,124 | INFO     | fitting pss+swap vs Time
[2026-01-08 21:25:54] 2026-01-08 20:24:59,125 | INFO     | sum of square deviations: 10449170802.0
[2026-01-08 21:25:54] 2026-01-08 20:24:59,128 | INFO     | sum of deviations: 204921249811.0
[2026-01-08 21:25:54] 2026-01-08 20:24:59,128 | INFO     | mean x: 1767893938.0
[2026-01-08 21:25:54] 2026-01-08 20:24:59,128 | INFO     | mean y: 2423790.256965944
[2026-01-08 21:25:54] 2026-01-08 20:24:59,129 | INFO     | intersect: -34668177559.17349
[2026-01-08 21:25:54] 2026-01-08 20:24:59,129 | INFO     | chi2: 8.0558491418058
[2026-01-08 21:25:54] 2026-01-08 20:24:59,130 | INFO     | sum of square deviations: 9971385099.5
[2026-01-08 21:25:54] 2026-01-08 20:24:59,133 | INFO     | sum of deviations: 222231149416.99997
[2026-01-08 21:25:54] 2026-01-08 20:24:59,133 | INFO     | mean x: 1767893785.5
[2026-01-08 21:25:54] 2026-01-08 20:24:59,133 | INFO     | mean y: 2429230.006289308
[2026-01-08 21:25:54] 2026-01-08 20:24:59,133 | INFO     | intersect: -39398422715.68144
[2026-01-08 21:25:54] 2026-01-08 20:24:59,134 | INFO     | chi2: 7.332758700112084
[2026-01-08 21:25:54] 2026-01-08 20:24:59,134 | INFO     | current chi2=7.332758700112084 (change=8.975968007410172 %)
[2026-01-08 21:25:54] 2026-01-08 20:24:59,134 | INFO     | right removable region: 317
[2026-01-08 21:25:54] 2026-01-08 20:24:59,135 | INFO     | sum of square deviations: 9971385099.5
[2026-01-08 21:25:54] 2026-01-08 20:24:59,143 | INFO     | sum of deviations: 92884873758.5
[2026-01-08 21:25:54] 2026-01-08 20:24:59,143 | INFO     | mean x: 1767894090.5
[2026-01-08 21:25:54] 2026-01-08 20:24:59,144 | INFO     | mean y: 2459530.9842767296
[2026-01-08 21:25:54] 2026-01-08 20:24:59,144 | INFO     | intersect: -16465725959.387045
[2026-01-08 21:25:54] 2026-01-08 20:24:59,144 | INFO     | chi2: 3.2189015744862344
[2026-01-08 21:25:54] 2026-01-08 20:24:59,144 | INFO     | current chi2=3.2189015744862344 (change=60.042678086140455 %)
[2026-01-08 21:25:54] 2026-01-08 20:24:59,145 | INFO     | sum of square deviations: 9508390372.0
[2026-01-08 21:25:54] 2026-01-08 20:24:59,148 | INFO     | sum of deviations: 13019278739.0
[2026-01-08 21:25:54] 2026-01-08 20:24:59,148 | INFO     | mean x: 1767894243.0
[2026-01-08 21:25:54] 2026-01-08 20:24:59,148 | INFO     | mean y: 2485799.4057507985
[2026-01-08 21:25:54] 2026-01-08 20:24:59,148 | INFO     | intersect: -2418187630.0812483
[2026-01-08 21:25:54] 2026-01-08 20:24:59,149 | INFO     | chi2: 0.8848062702878835
[2026-01-08 21:25:54] 2026-01-08 20:24:59,149 | INFO     | current chi2=0.8848062702878835 (change=72.51216758843873 %)
[2026-01-08 21:25:54] 2026-01-08 20:24:59,150 | INFO     | sum of square deviations: 9059954057.0
[2026-01-08 21:25:54] 2026-01-08 20:24:59,153 | INFO     | sum of deviations: 84761695.99999237
[2026-01-08 21:25:54] 2026-01-08 20:24:59,153 | INFO     | mean x: 1767894395.5
[2026-01-08 21:25:54] 2026-01-08 20:24:59,153 | INFO     | mean y: 2490187.837662338
[2026-01-08 21:25:54] 2026-01-08 20:24:59,153 | INFO     | intersect: -14049601.036397435
[2026-01-08 21:25:54] 2026-01-08 20:24:59,154 | INFO     | chi2: 0.8085952729771752
[2026-01-08 21:25:54] 2026-01-08 20:24:59,154 | INFO     | current chi2=0.8085952729771752 (change=8.613297607612127 %)
[2026-01-08 21:25:54] 2026-01-08 20:24:59,154 | INFO     | left removable region: 30
[2026-01-08 21:25:54] 2026-01-08 20:24:59,154 | INFO     | sum of square deviations: 7330250928.0
[2026-01-08 21:25:54] 2026-01-08 20:24:59,163 | INFO     | sum of deviations: 10102990739.0
[2026-01-08 21:25:54] 2026-01-08 20:24:59,163 | INFO     | mean x: 1767894670.0
[2026-01-08 21:25:54] 2026-01-08 20:24:59,164 | INFO     | mean y: 2500470.5017421604
[2026-01-08 21:25:54] 2026-01-08 20:24:59,164 | INFO     | intersect: -2434117819.100343
[2026-01-08 21:25:54] 2026-01-08 20:24:59,164 | INFO     | chi2: 0.0007859443920779601
[2026-01-08 21:25:54] 2026-01-08 20:24:59,164 | INFO     | current memory leak: 1.38 B/s (using 287 data points, chi2=0.00)
[2026-01-08 21:25:54] 2026-01-08 20:24:59,165 | INFO     | could have reported an average CPU frequency of 2250 MHz (14 samples)
[2026-01-08 21:25:54] 2026-01-08 20:24:59,165 | INFO     | ..............................
[2026-01-08 21:25:54] 2026-01-08 20:24:59,165 | INFO     | . Timing measurements:
[2026-01-08 21:25:54] 2026-01-08 20:24:59,166 | INFO     | . get job = 0 s
[2026-01-08 21:25:54] 2026-01-08 20:24:59,166 | INFO     | . initial setup = 7 s
[2026-01-08 21:25:54] 2026-01-08 20:24:59,166 | INFO     | . payload setup = 165 s
[2026-01-08 21:25:54] 2026-01-08 20:24:59,166 | INFO     | . stage-in = 0 s
[2026-01-08 21:25:54] 2026-01-08 20:24:59,166 | INFO     | . payload execution = 19837 s
[2026-01-08 21:25:54] 2026-01-08 20:24:59,166 | INFO     | . stage-out = 3 s
[2026-01-08 21:25:54] 2026-01-08 20:24:59,166 | INFO     | . log creation = 1 s
[2026-01-08 21:25:54] 2026-01-08 20:24:59,166 | INFO     | ..............................
[2026-01-08 21:25:54] 2026-01-08 20:24:59,303 | INFO     | PID=13052 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 21:25:54] 2026-01-08 20:24:59,303 | INFO     | .. there are 2 such processes running
[2026-01-08 21:25:54] 2026-01-08 20:24:59,514 | INFO     | 
[2026-01-08 21:25:54] 2026-01-08 20:24:59,514 | INFO     | job summary report
[2026-01-08 21:25:54] 2026-01-08 20:24:59,514 | INFO     | --------------------------------------------------
[2026-01-08 21:25:54] 2026-01-08 20:24:59,514 | INFO     | PanDA job id: 6962916021
[2026-01-08 21:25:54] 2026-01-08 20:24:59,514 | INFO     | task id: 47898826
[2026-01-08 21:25:54] 2026-01-08 20:24:59,514 | INFO     | errors: (none)
[2026-01-08 21:25:54] 2026-01-08 20:24:59,514 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 21:25:54] 2026-01-08 20:24:59,515 | INFO     | pilot state: finished 
[2026-01-08 21:25:54] 2026-01-08 20:24:59,515 | INFO     | transexitcode: 0
[2026-01-08 21:25:54] 2026-01-08 20:24:59,515 | INFO     | exeerrorcode: 0
[2026-01-08 21:25:54] 2026-01-08 20:24:59,515 | INFO     | exeerrordiag: 
[2026-01-08 21:25:54] 2026-01-08 20:24:59,515 | INFO     | exitcode: 0
[2026-01-08 21:25:54] 2026-01-08 20:24:59,515 | INFO     | exitmsg: OK
[2026-01-08 21:25:54] 2026-01-08 20:24:59,515 | INFO     | cpuconsumptiontime: 74207 s
[2026-01-08 21:25:54] 2026-01-08 20:24:59,515 | INFO     | nevents: 400
[2026-01-08 21:25:54] 2026-01-08 20:24:59,515 | INFO     | neventsw: 0
[2026-01-08 21:25:54] 2026-01-08 20:24:59,515 | INFO     | pid: 19527
[2026-01-08 21:25:54] 2026-01-08 20:24:59,520 | INFO     | pgrp: 19527
[2026-01-08 21:25:54] 2026-01-08 20:24:59,520 | INFO     | corecount: 8
[2026-01-08 21:25:54] 2026-01-08 20:24:59,520 | INFO     | event service: False
[2026-01-08 21:25:54] 2026-01-08 20:24:59,520 | INFO     | sizes: {0: 2283741, 1: 2283825, 2: 2284024, 13: 2284024, 23: 2284080, 34: 2284108, 45: 2284264, 56: 2284292, 66: 2284320, 77: 2284348, 88: 2284404, 99: 2284712, 10
[2026-01-08 21:25:54] 2026-01-08 20:24:59,520 | INFO     | --------------------------------------------------
[2026-01-08 21:25:54] 2026-01-08 20:24:59,520 | INFO     | 
[2026-01-08 21:25:54] 2026-01-08 20:24:59,520 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-08 21:25:54] 2026-01-08 20:25:00,059 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 21:25:54] 2026-01-08 20:25:00,059 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 21:25:54] 2026-01-08 20:25:00,060 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 21:25:54] 2026-01-08 20:25:00,060 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 21:25:54] 2026-01-08 20:25:00,060 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 21:25:54] 2026-01-08 20:25:00,060 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 21:25:54] 2026-01-08 20:25:00,060 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 21:25:54] 2026-01-08 20:25:00,060 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 21:25:54] 2026-01-08 20:25:00,060 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 21:25:54] 2026-01-08 20:25:00,060 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 21:25:54] 2026-01-08 20:25:00,061 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 21:25:54] 2026-01-08 20:25:00,061 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 21:25:54] 2026-01-08 20:25:00,061 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 21:25:54] 2026-01-08 20:25:00,061 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 21:25:54] 2026-01-08 20:25:00,061 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 21:25:54] 2026-01-08 20:25:00,061 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 21:25:54] 2026-01-08 20:25:00,061 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 21:25:54] 2026-01-08 20:25:00,061 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 21:25:54] 2026-01-08 20:25:00,062 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 21:25:54] 2026-01-08 20:25:00,062 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 21:25:54] 2026-01-08 20:25:00,062 | INFO     | job 6962916021 has completed (purged errors)
[2026-01-08 21:25:54] 2026-01-08 20:25:00,062 | INFO     | overall cleanup function is called
[2026-01-08 21:25:54] 2026-01-08 20:25:01,071 | INFO     | --- collectZombieJob: --- 10, [19527]
[2026-01-08 21:25:54] 2026-01-08 20:25:01,071 | INFO     | zombie collector waiting for pid 19527
[2026-01-08 21:25:54] 2026-01-08 20:25:01,071 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 21:25:54] 2026-01-08 20:25:01,071 | INFO     | collected zombie processes
[2026-01-08 21:25:54] 2026-01-08 20:25:01,071 | INFO     | will attempt to kill all subprocesses of pid=19527
[2026-01-08 21:25:54] 2026-01-08 20:25:01,164 | INFO     | process IDs to be killed: [19527] (in reverse order)
[2026-01-08 21:25:54] 2026-01-08 20:25:02,203 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 21:25:54] 2026-01-08 20:25:02,204 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 21:25:54] 2026-01-08 20:25:02,206 | INFO     | did not find any defunct processes belonging to 19527
[2026-01-08 21:25:54] 2026-01-08 20:25:02,207 | INFO     | did not find any defunct processes belonging to 19527
[2026-01-08 21:25:54] 2026-01-08 20:25:02,208 | INFO     | ready for new job
[2026-01-08 21:25:54] 2026-01-08 20:25:02,208 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 21:25:54] 2026-01-08 20:25:02,210 | INFO     | ***************************************
[2026-01-08 21:25:54] 2026-01-08 20:25:02,210 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 21:25:54] 2026-01-08 20:25:02,210 | INFO     | ***************************************
[2026-01-08 21:25:54] 2026-01-08 20:25:02,210 | INFO     | 
[2026-01-08 21:25:54] 2026-01-08 20:25:02,211 | INFO     | pilot is running in a VM
[2026-01-08 21:25:54] 2026-01-08 20:25:02,211 | INFO     | architecture information:
[2026-01-08 21:25:54] 2026-01-08 20:25:02,226 | INFO     | executing command: cat /etc/os-release
[2026-01-08 21:25:54] 2026-01-08 20:25:02,511 | INFO     | cat /etc/os-release:
[2026-01-08 21:25:54] NAME="CentOS Linux"
[2026-01-08 21:25:54] VERSION="7 (Core)"
[2026-01-08 21:25:54] ID="centos"
[2026-01-08 21:25:54] ID_LIKE="rhel fedora"
[2026-01-08 21:25:54] VERSION_ID="7"
[2026-01-08 21:25:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 21:25:54] ANSI_COLOR="0;31"
[2026-01-08 21:25:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 21:25:54] HOME_URL="https://www.centos.org/"
[2026-01-08 21:25:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 21:25:54] 
[2026-01-08 21:25:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 21:25:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 21:25:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 21:25:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 21:25:54] 
[2026-01-08 21:25:54] 2026-01-08 20:25:02,511 | INFO     | ***************************************
[2026-01-08 21:25:54] 2026-01-08 20:25:03,015 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-08 21:25:54] 2026-01-08 20:25:03,217 | INFO     | sufficient remaining disk space (496277389312 B)
[2026-01-08 21:25:54] 2026-01-08 20:25:03,218 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 21:25:54] 2026-01-08 20:25:03,218 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 21:25:54] 2026-01-08 20:25:03,218 | INFO     | update_server=False
[2026-01-08 21:25:54] 2026-01-08 20:25:03,218 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 21:25:54] 2026-01-08 20:25:03,219 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 21:25:54] 2026-01-08 20:25:03,364 | INFO     | all payload control threads have been joined
[2026-01-08 21:25:54] 2026-01-08 20:25:03,449 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 21:25:54] 2026-01-08 20:25:03,449 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 21:25:54] 2026-01-08 20:25:03,449 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:25:54] 2026-01-08 20:25:03,449 | INFO     | will abort loop
[2026-01-08 21:25:54] 2026-01-08 20:25:03,569 | INFO     | all job control threads have been joined
[2026-01-08 21:25:54] 2026-01-08 20:25:03,878 | INFO     | all data control threads have been joined
[2026-01-08 21:25:54] 2026-01-08 20:25:04,224 | INFO     | [job] retrieve thread has finished
[2026-01-08 21:25:54] 2026-01-08 20:25:04,363 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:25:54] 2026-01-08 20:25:04,370 | INFO     | [payload] control thread has finished
[2026-01-08 21:25:54] 2026-01-08 20:25:04,437 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 21:25:54] 2026-01-08 20:25:04,451 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 21:25:54] 2026-01-08 20:25:04,455 | INFO     | [job] job monitor thread has finished
[2026-01-08 21:25:54] 2026-01-08 20:25:04,575 | INFO     | [job] control thread has finished
[2026-01-08 21:25:54] 2026-01-08 20:25:04,577 | INFO     | [payload] validate_post thread has finished
[2026-01-08 21:25:54] 2026-01-08 20:25:04,884 | INFO     | [data] control thread has finished
[2026-01-08 21:25:54] 2026-01-08 20:25:04,981 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 21:25:54] 2026-01-08 20:25:05,226 | INFO     | [data] copytool_out thread has finished
[2026-01-08 21:25:54] 2026-01-08 20:25:05,306 | INFO     | [data] copytool_in thread has finished
[2026-01-08 21:25:54] 2026-01-08 20:25:05,314 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 21:25:54] 2026-01-08 20:25:05,327 | INFO     | [job] validate thread has finished
[2026-01-08 21:25:54] 2026-01-08 20:25:05,369 | INFO     | [job] queue monitor thread has finished
[2026-01-08 21:25:54] 2026-01-08 20:25:05,461 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 21:25:54] 2026-01-08 20:25:05,670 | INFO     | [payload] failed_post thread has finished
[2026-01-08 21:25:54] 2026-01-08 20:25:09,323 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 21:25:54] 2026-01-08 20:25:31,435 | INFO     | PID=13052 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 21:25:54] 2026-01-08 20:25:31,435 | INFO     | .. there are 2 such processes running
[2026-01-08 21:25:54] 2026-01-08 20:25:31,435 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 21:25:54] 2026-01-08 20:25:31,435 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 21:25:54] 2026-01-08 20:25:31,435 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 21:25:54] 2026-01-08 20:25:43,457 | INFO     | [monitor] cgroup control has ended
[2026-01-08 21:25:54] 2026-01-08 20:25:43,968 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140498353760064)>', '<ExcThread(monitor, started 140497767098112)>']
[2026-01-08 21:25:54] 2026-01-08 20:25:44,514 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 21:25:54] 2026-01-08 20:25:44,514 | INFO     | [monitor] control thread has ended
[2026-01-08 21:25:54] 2026-01-08 20:25:48,994 | INFO     | all workflow threads have been joined
[2026-01-08 21:25:54] 2026-01-08 20:25:48,994 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 21:25:54] 2026-01-08 20:25:48,994 | INFO     | traces error code: 0
[2026-01-08 21:25:54] 2026-01-08 20:25:48,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 21:25:54] 2026-01-08 20:25:49,409 [wrapper] ==== pilot stdout END ====
[2026-01-08 21:25:54] 2026-01-08 20:25:49,537 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 21:25:54] 2026-01-08 20:25:49,585 [wrapper] pilotpid: 13052
[2026-01-08 21:25:54] 2026-01-08 20:25:49,708 [wrapper] Pilot exit status: 0
[2026-01-08 21:25:54] 2026-01-08 20:25:50,235 [wrapper] pandaids: 6962916021
[2026-01-08 21:25:54] 2026-01-08 20:25:51,096 [wrapper] cleanup supervisor_pilot 17200 13053
[2026-01-08 21:25:54] 2026-01-08 20:25:51,121 [wrapper] Test setup, not cleaning
[2026-01-08 21:25:54] 2026-01-08 20:25:51,203 [wrapper] apfmon messages muted
[2026-01-08 21:25:54] 2026-01-08 20:25:51,263 [wrapper] ==== wrapper stdout END ====
[2026-01-08 21:25:54] 2026-01-08 20:25:51,333 [wrapper] ==== wrapper stderr END ====
[2026-01-08 21:25:54]  *** Error codes and diagnostics ***
[2026-01-08 21:25:54]     "exeErrorCode": 0,
[2026-01-08 21:25:54]     "exeErrorDiag": "",
[2026-01-08 21:25:54]     "pilotErrorCode": 0,
[2026-01-08 21:25:54]     "pilotErrorDiag": "",
[2026-01-08 21:25:54]  *** Listing of results directory ***
[2026-01-08 21:25:54] total 441580
[2026-01-08 21:25:54] -rw-r--r--. 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-08 21:25:54] -rwx------. 1 boinc boinc     36322 Jan  8 09:03 runpilot2-wrapper.sh
[2026-01-08 21:25:54] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:05 queuedata.json
[2026-01-08 21:25:54] -rw-r--r--. 1 boinc boinc       100 Jan  8 15:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 21:25:54] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 15:41 run_atlas
[2026-01-08 21:25:54] -rw-r--r--. 1 boinc boinc       105 Jan  8 15:41 job.xml
[2026-01-08 21:25:54] -rw-r--r--. 1 boinc boinc      6390 Jan  8 15:41 init_data.xml
[2026-01-08 21:25:54] -rw-r--r--. 2 boinc boinc 225002978 Jan  8 15:41 EVNT.47898824._000442.pool.root.1
[2026-01-08 21:25:54] -rw-r--r--. 2 boinc boinc     15847 Jan  8 15:41 start_atlas.sh
[2026-01-08 21:25:54] drwxrwx--x. 2 boinc boinc        68 Jan  8 15:41 shared
[2026-01-08 21:25:54] -rw-r--r--. 2 boinc boinc    592399 Jan  8 15:41 input.tar.gz
[2026-01-08 21:25:54] -rw-r--r--. 1 boinc boinc         0 Jan  8 15:41 boinc_lockfile
[2026-01-08 21:25:54] -rw-r--r--. 1 boinc boinc      2518 Jan  8 15:42 pandaJob.out
[2026-01-08 21:25:54] -rw-------. 1 boinc boinc    989835 Jan  8 15:46 agis_schedconf.cvmfs.json
[2026-01-08 21:25:54] drwx------. 5 boinc boinc      4096 Jan  8 15:46 pilot3
[2026-01-08 21:25:54] -rw-------. 1 boinc boinc 216782622 Jan  8 21:21 HITS.47898826._018608.pool.root.1
[2026-01-08 21:25:54] -rw-r--r--. 1 boinc boinc       531 Jan  8 21:21 boinc_task_state.xml
[2026-01-08 21:25:54] -rw-------. 1 boinc boinc      1013 Jan  8 21:22 memory_monitor_summary.json
[2026-01-08 21:25:54] -rw-------. 1 boinc boinc   1516240 Jan  8 21:23 agis_ddmendpoints.agis.ALL.json
[2026-01-08 21:25:54] -rw-------. 1 boinc boinc    530741 Jan  8 21:23 log.47898826._018608.job.log.tgz.1
[2026-01-08 21:25:54] -rw-------. 1 boinc boinc        95 Jan  8 21:24 pilot_heartbeat.json
[2026-01-08 21:25:54] -rw-------. 1 boinc boinc      7781 Jan  8 21:24 heartbeat.json
[2026-01-08 21:25:54] -rw-r--r--. 1 boinc boinc      8192 Jan  8 21:25 boinc_mmap_file
[2026-01-08 21:25:54] -rw-r--r--. 1 boinc boinc        28 Jan  8 21:25 wrapper_checkpoint.txt
[2026-01-08 21:25:54] -rw-------. 1 boinc boinc      5070 Jan  8 21:25 pilotlog.txt
[2026-01-08 21:25:54] -rw-------. 1 boinc boinc   2714799 Jan  8 21:25 log.47898826._018608.job.log.1
[2026-01-08 21:25:54] -rw-------. 1 boinc boinc       357 Jan  8 21:25 output.list
[2026-01-08 21:25:54] -rw-r--r--. 1 boinc boinc       620 Jan  8 21:25 runtime_log
[2026-01-08 21:25:54] -rw-------. 1 boinc boinc   3266560 Jan  8 21:25 result.tar.gz
[2026-01-08 21:25:54] -rw-r--r--. 1 boinc boinc      8817 Jan  8 21:25 runtime_log.err
[2026-01-08 21:25:54] -rw-------. 1 boinc boinc       657 Jan  8 21:25 CSRLDmDA0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9WjKDmAdHism.diag
[2026-01-08 21:25:54] -rw-r--r--. 1 boinc boinc     20750 Jan  8 21:25 stderr.txt
[2026-01-08 21:25:54] HITS file was successfully produced:
[2026-01-08 21:25:54] -rw-------. 1 boinc boinc 216782622 Jan  8 21:21 shared/HITS.pool.root.1
[2026-01-08 21:25:54]  *** Contents of shared directory: ***
[2026-01-08 21:25:54] total 435224
[2026-01-08 21:25:54] -rw-r--r--. 2 boinc boinc 225002978 Jan  8 15:41 ATLAS.root_0
[2026-01-08 21:25:54] -rw-r--r--. 2 boinc boinc     15847 Jan  8 15:41 start_atlas.sh
[2026-01-08 21:25:54] -rw-r--r--. 2 boinc boinc    592399 Jan  8 15:41 input.tar.gz
[2026-01-08 21:25:54] -rw-------. 1 boinc boinc 216782622 Jan  8 21:21 HITS.pool.root.1
[2026-01-08 21:25:54] -rw-------. 1 boinc boinc   3266560 Jan  8 21:25 result.tar.gz
21:25:56 (9307): run_atlas exited; CPU time 74396.655114
21:25:56 (9307): called boinc_finish(0)

</stderr_txt>
]]>

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