Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:20:27 (20539): wrapper (7.7.26015): starting
13:20:27 (20539): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 13:20:27] Arguments: --nthreads 8
[2026-01-08 13:20:27] Threads: 8
[2026-01-08 13:20:27] Checking for CVMFS
[2026-01-08 13:20:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 13:20:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 13:20:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 13:20:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 13:20:32] 2.11.2.0 24263 33968 122296 154906 1 61 14756438 25165824 899 130560 0 16728859 99.812 10796007 3306 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 13:20:32] CVMFS is ok
[2026-01-08 13:20:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 13:20:32] Checking for apptainer binary...
[2026-01-08 13:20:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 13:20:32] Running /usr/bin/apptainer --version
[2026-01-08 13:20:32] apptainer version 1.3.2-1.el7
[2026-01-08 13:20:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 13:20:43] cg-vwn484.simple-grid.lan
[2026-01-08 13:20:43] apptainer works
[2026-01-08 13:20:43] Set ATHENA_PROC_NUMBER=8
[2026-01-08 13:20:43] Set ATHENA_CORE_NUMBER=8
[2026-01-08 13:20:43] Starting ATLAS job with PandaID=6962916127
[2026-01-08 13:20:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 19:05:34]  *** The last 200 lines of the pilot log: ***
[2026-01-08 19:05:34] 2026-01-08 18:04:33,026 | INFO     | time since job start (20384s) is within the limit (174528.0s)
[2026-01-08 19:05:34] 2026-01-08 18:04:34,210 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 19:05:34] 2026-01-08 18:04:34,211 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-08 19:05:34] 2026-01-08 18:04:34,215 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6962916127/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 19:05:34] 2026-01-08 18:04:34,216 | INFO     | extracted standard info from prmon json
[2026-01-08 19:05:34] 2026-01-08 18:04:34,216 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 19:05:34] 2026-01-08 18:04:34,216 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 19:05:34] 2026-01-08 18:04:34,216 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 19:05:34] 2026-01-08 18:04:34,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 19:05:34] 2026-01-08 18:04:34,223 | INFO     | fitting pss+swap vs Time
[2026-01-08 19:05:34] 2026-01-08 18:04:34,224 | INFO     | sum of square deviations: 10546523325.0
[2026-01-08 19:05:34] 2026-01-08 18:04:34,228 | INFO     | sum of deviations: 179916067408.0
[2026-01-08 19:05:34] 2026-01-08 18:04:34,228 | INFO     | mean x: 1767885485.5
[2026-01-08 19:05:34] 2026-01-08 18:04:34,228 | INFO     | mean y: 2441019.1481481483
[2026-01-08 19:05:34] 2026-01-08 18:04:34,228 | INFO     | intersect: -30156407956.69127
[2026-01-08 19:05:34] 2026-01-08 18:04:34,232 | INFO     | chi2: 8.231062570548536
[2026-01-08 19:05:34] 2026-01-08 18:04:34,232 | INFO     | sum of square deviations: 10065751520.0
[2026-01-08 19:05:34] 2026-01-08 18:04:34,236 | INFO     | sum of deviations: 198060765068.0
[2026-01-08 19:05:34] 2026-01-08 18:04:34,236 | INFO     | mean x: 1767885333.0
[2026-01-08 19:05:34] 2026-01-08 18:04:34,236 | INFO     | mean y: 2446689.7021943573
[2026-01-08 19:05:34] 2026-01-08 18:04:34,236 | INFO     | intersect: -34783701260.67717
[2026-01-08 19:05:34] 2026-01-08 18:04:34,237 | INFO     | chi2: 7.516201915312377
[2026-01-08 19:05:34] 2026-01-08 18:04:34,237 | INFO     | current chi2=7.516201915312377 (change=8.684913388873916 %)
[2026-01-08 19:05:34] 2026-01-08 18:04:34,237 | INFO     | right removable region: 318
[2026-01-08 19:05:34] 2026-01-08 18:04:34,245 | INFO     | sum of square deviations: 10065751520.0
[2026-01-08 19:05:34] 2026-01-08 18:04:34,249 | INFO     | sum of deviations: 67442289421.999954
[2026-01-08 19:05:34] 2026-01-08 18:04:34,249 | INFO     | mean x: 1767885638.0
[2026-01-08 19:05:34] 2026-01-08 18:04:34,249 | INFO     | mean y: 2476675.169278997
[2026-01-08 19:05:34] 2026-01-08 18:04:34,249 | INFO     | intersect: -11842665202.820675
[2026-01-08 19:05:34] 2026-01-08 18:04:34,250 | INFO     | chi2: 3.4094184520383197
[2026-01-08 19:05:34] 2026-01-08 18:04:34,250 | INFO     | current chi2=3.4094184520383197 (change=58.578635227029885 %)
[2026-01-08 19:05:34] 2026-01-08 18:04:34,251 | INFO     | sum of square deviations: 9599817202.5
[2026-01-08 19:05:34] 2026-01-08 18:04:34,254 | INFO     | sum of deviations: -14591847850.499996
[2026-01-08 19:05:34] 2026-01-08 18:04:34,254 | INFO     | mean x: 1767885790.5
[2026-01-08 19:05:34] 2026-01-08 18:04:34,254 | INFO     | mean y: 2503495.2324840766
[2026-01-08 19:05:34] 2026-01-08 18:04:34,254 | INFO     | intersect: 2689713045.9850636
[2026-01-08 19:05:34] 2026-01-08 18:04:34,255 | INFO     | chi2: 0.9809379986881215
[2026-01-08 19:05:34] 2026-01-08 18:04:34,255 | INFO     | current chi2=0.9809379986881215 (change=71.22858304173053 %)
[2026-01-08 19:05:34] 2026-01-08 18:04:34,255 | INFO     | sum of square deviations: 9148487810.0
[2026-01-08 19:05:34] 2026-01-08 18:04:34,258 | INFO     | sum of deviations: -32661518285.999996
[2026-01-08 19:05:34] 2026-01-08 18:04:34,259 | INFO     | mean x: 1767885943.0
[2026-01-08 19:05:34] 2026-01-08 18:04:34,259 | INFO     | mean y: 2509577.5372168287
[2026-01-08 19:05:34] 2026-01-08 18:04:34,259 | INFO     | intersect: 6314136182.290472
[2026-01-08 19:05:34] 2026-01-08 18:04:34,259 | INFO     | chi2: 0.8333541425438165
[2026-01-08 19:05:34] 2026-01-08 18:04:34,259 | INFO     | current chi2=0.8333541425438165 (change=15.045176794219357 %)
[2026-01-08 19:05:34] 2026-01-08 18:04:34,260 | INFO     | left removable region: 30
[2026-01-08 19:05:34] 2026-01-08 18:04:34,260 | INFO     | sum of square deviations: 7407141672.0
[2026-01-08 19:05:34] 2026-01-08 18:04:34,263 | INFO     | sum of deviations: -5226852069.5
[2026-01-08 19:05:34] 2026-01-08 18:04:34,263 | INFO     | mean x: 1767886217.5
[2026-01-08 19:05:34] 2026-01-08 18:04:34,263 | INFO     | mean y: 2513980.15625
[2026-01-08 19:05:34] 2026-01-08 18:04:34,271 | INFO     | intersect: 1250023497.830344
[2026-01-08 19:05:34] 2026-01-08 18:04:34,272 | INFO     | chi2: 0.032820704958618094
[2026-01-08 19:05:34] 2026-01-08 18:04:34,272 | INFO     | current memory leak: -0.71 B/s (using 288 data points, chi2=0.03)
[2026-01-08 19:05:34] 2026-01-08 18:04:34,273 | INFO     | could have reported an average CPU frequency of 2249 MHz (14 samples)
[2026-01-08 19:05:34] 2026-01-08 18:04:34,273 | INFO     | ..............................
[2026-01-08 19:05:34] 2026-01-08 18:04:34,274 | INFO     | . Timing measurements:
[2026-01-08 19:05:34] 2026-01-08 18:04:34,274 | INFO     | . get job = 0 s
[2026-01-08 19:05:34] 2026-01-08 18:04:34,274 | INFO     | . initial setup = 14 s
[2026-01-08 19:05:34] 2026-01-08 18:04:34,274 | INFO     | . payload setup = 158 s
[2026-01-08 19:05:34] 2026-01-08 18:04:34,274 | INFO     | . stage-in = 0 s
[2026-01-08 19:05:34] 2026-01-08 18:04:34,274 | INFO     | . payload execution = 19892 s
[2026-01-08 19:05:34] 2026-01-08 18:04:34,274 | INFO     | . stage-out = 3 s
[2026-01-08 19:05:34] 2026-01-08 18:04:34,274 | INFO     | . log creation = 1 s
[2026-01-08 19:05:34] 2026-01-08 18:04:34,274 | INFO     | ..............................
[2026-01-08 19:05:34] 2026-01-08 18:04:34,455 | INFO     | 
[2026-01-08 19:05:34] 2026-01-08 18:04:34,455 | INFO     | job summary report
[2026-01-08 19:05:34] 2026-01-08 18:04:34,455 | INFO     | --------------------------------------------------
[2026-01-08 19:05:34] 2026-01-08 18:04:34,455 | INFO     | PanDA job id: 6962916127
[2026-01-08 19:05:34] 2026-01-08 18:04:34,455 | INFO     | task id: 47898826
[2026-01-08 19:05:34] 2026-01-08 18:04:34,455 | INFO     | errors: (none)
[2026-01-08 19:05:34] 2026-01-08 18:04:34,455 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 19:05:34] 2026-01-08 18:04:34,456 | INFO     | pilot state: finished 
[2026-01-08 19:05:34] 2026-01-08 18:04:34,456 | INFO     | transexitcode: 0
[2026-01-08 19:05:34] 2026-01-08 18:04:34,456 | INFO     | exeerrorcode: 0
[2026-01-08 19:05:34] 2026-01-08 18:04:34,456 | INFO     | exeerrordiag: 
[2026-01-08 19:05:34] 2026-01-08 18:04:34,456 | INFO     | exitcode: 0
[2026-01-08 19:05:34] 2026-01-08 18:04:34,456 | INFO     | exitmsg: OK
[2026-01-08 19:05:34] 2026-01-08 18:04:34,456 | INFO     | cpuconsumptiontime: 73964 s
[2026-01-08 19:05:34] 2026-01-08 18:04:34,456 | INFO     | nevents: 400
[2026-01-08 19:05:34] 2026-01-08 18:04:34,456 | INFO     | neventsw: 0
[2026-01-08 19:05:34] 2026-01-08 18:04:34,456 | INFO     | pid: 30786
[2026-01-08 19:05:34] 2026-01-08 18:04:34,456 | INFO     | pgrp: 30786
[2026-01-08 19:05:34] 2026-01-08 18:04:34,457 | INFO     | corecount: 8
[2026-01-08 19:05:34] 2026-01-08 18:04:34,457 | INFO     | event service: False
[2026-01-08 19:05:34] 2026-01-08 18:04:34,457 | INFO     | sizes: {0: 2283742, 1: 2283997, 2: 2283997, 12: 2284025, 23: 2284053, 34: 2284081, 44: 2284237, 55: 2284265, 66: 2284293, 77: 2284321, 87: 2284377, 98: 2284685, 99
[2026-01-08 19:05:34] 2026-01-08 18:04:34,457 | INFO     | --------------------------------------------------
[2026-01-08 19:05:34] 2026-01-08 18:04:34,457 | INFO     | 
[2026-01-08 19:05:34] 2026-01-08 18:04:34,457 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-01-08 19:05:34] 2026-01-08 18:04:34,991 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 19:05:34] 2026-01-08 18:04:34,991 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 19:05:34] 2026-01-08 18:04:34,991 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 19:05:34] 2026-01-08 18:04:34,992 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 19:05:34] 2026-01-08 18:04:34,992 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 19:05:34] 2026-01-08 18:04:34,992 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 19:05:34] 2026-01-08 18:04:34,992 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 19:05:34] 2026-01-08 18:04:34,992 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 19:05:34] 2026-01-08 18:04:34,992 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 19:05:34] 2026-01-08 18:04:34,992 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 19:05:34] 2026-01-08 18:04:34,992 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 19:05:34] 2026-01-08 18:04:34,992 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 19:05:34] 2026-01-08 18:04:34,993 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 19:05:34] 2026-01-08 18:04:34,993 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 19:05:34] 2026-01-08 18:04:34,993 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 19:05:34] 2026-01-08 18:04:34,993 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 19:05:34] 2026-01-08 18:04:34,993 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 19:05:34] 2026-01-08 18:04:34,993 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 19:05:34] 2026-01-08 18:04:34,993 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 19:05:34] 2026-01-08 18:04:34,993 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 19:05:34] 2026-01-08 18:04:34,993 | INFO     | job 6962916127 has completed (purged errors)
[2026-01-08 19:05:34] 2026-01-08 18:04:34,994 | INFO     | overall cleanup function is called
[2026-01-08 19:05:34] 2026-01-08 18:04:36,002 | INFO     | --- collectZombieJob: --- 10, [30786]
[2026-01-08 19:05:34] 2026-01-08 18:04:36,003 | INFO     | zombie collector waiting for pid 30786
[2026-01-08 19:05:34] 2026-01-08 18:04:36,003 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 19:05:34] 2026-01-08 18:04:36,003 | INFO     | collected zombie processes
[2026-01-08 19:05:34] 2026-01-08 18:04:36,003 | INFO     | will attempt to kill all subprocesses of pid=30786
[2026-01-08 19:05:34] 2026-01-08 18:04:36,097 | INFO     | process IDs to be killed: [30786] (in reverse order)
[2026-01-08 19:05:34] 2026-01-08 18:04:37,090 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 19:05:34] 2026-01-08 18:04:37,090 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 19:05:34] 2026-01-08 18:04:37,092 | INFO     | did not find any defunct processes belonging to 30786
[2026-01-08 19:05:34] 2026-01-08 18:04:37,094 | INFO     | did not find any defunct processes belonging to 30786
[2026-01-08 19:05:34] 2026-01-08 18:04:37,094 | INFO     | ready for new job
[2026-01-08 19:05:34] 2026-01-08 18:04:37,094 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 19:05:34] 2026-01-08 18:04:37,097 | INFO     | ***************************************
[2026-01-08 19:05:34] 2026-01-08 18:04:37,097 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 19:05:34] 2026-01-08 18:04:37,097 | INFO     | ***************************************
[2026-01-08 19:05:34] 2026-01-08 18:04:37,097 | INFO     | 
[2026-01-08 19:05:34] 2026-01-08 18:04:37,103 | INFO     | pilot is running in a VM
[2026-01-08 19:05:34] 2026-01-08 18:04:37,103 | INFO     | architecture information:
[2026-01-08 19:05:34] 2026-01-08 18:04:37,121 | INFO     | executing command: cat /etc/os-release
[2026-01-08 19:05:34] 2026-01-08 18:04:37,502 | INFO     | cat /etc/os-release:
[2026-01-08 19:05:34] NAME="CentOS Linux"
[2026-01-08 19:05:34] VERSION="7 (Core)"
[2026-01-08 19:05:34] ID="centos"
[2026-01-08 19:05:34] ID_LIKE="rhel fedora"
[2026-01-08 19:05:34] VERSION_ID="7"
[2026-01-08 19:05:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 19:05:34] ANSI_COLOR="0;31"
[2026-01-08 19:05:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 19:05:34] HOME_URL="https://www.centos.org/"
[2026-01-08 19:05:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 19:05:34] 
[2026-01-08 19:05:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 19:05:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 19:05:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 19:05:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 19:05:34] 
[2026-01-08 19:05:34] 2026-01-08 18:04:37,502 | INFO     | ***************************************
[2026-01-08 19:05:34] 2026-01-08 18:04:38,006 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-01-08 19:05:34] 2026-01-08 18:04:38,311 | INFO     | sufficient remaining disk space (496490250240 B)
[2026-01-08 19:05:34] 2026-01-08 18:04:38,311 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 19:05:34] 2026-01-08 18:04:38,312 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 19:05:34] 2026-01-08 18:04:38,312 | INFO     | update_server=False
[2026-01-08 19:05:34] 2026-01-08 18:04:38,312 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 19:05:34] 2026-01-08 18:04:38,762 | INFO     | all data control threads have been joined
[2026-01-08 19:05:34] 2026-01-08 18:04:38,844 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 19:05:34] 2026-01-08 18:04:38,845 | INFO     | aborting loop
[2026-01-08 19:05:34] 2026-01-08 18:04:39,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 19:05:34] 2026-01-08 18:04:39,086 | INFO     | all payload control threads have been joined
[2026-01-08 19:05:34] 2026-01-08 18:04:39,182 | INFO     | all job control threads have been joined
[2026-01-08 19:05:34] 2026-01-08 18:04:39,318 | INFO     | [job] retrieve thread has finished
[2026-01-08 19:05:34] 2026-01-08 18:04:39,436 | INFO     | [payload] validate_post thread has finished
[2026-01-08 19:05:34] 2026-01-08 18:04:39,469 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 19:05:34] 2026-01-08 18:04:39,588 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 19:05:34] 2026-01-08 18:04:39,768 | INFO     | [data] control thread has finished
[2026-01-08 19:05:34] 2026-01-08 18:04:39,851 | INFO     | [job] job monitor thread has finished
[2026-01-08 19:05:34] 2026-01-08 18:04:40,092 | INFO     | [payload] control thread has finished
[2026-01-08 19:05:34] 2026-01-08 18:04:40,188 | INFO     | [job] control thread has finished
[2026-01-08 19:05:34] 2026-01-08 18:04:40,330 | INFO     | [job] validate thread has finished
[2026-01-08 19:05:34] 2026-01-08 18:04:40,420 | INFO     | [data] copytool_in thread has finished
[2026-01-08 19:05:34] 2026-01-08 18:04:40,450 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 19:05:34] 2026-01-08 18:04:40,475 | INFO     | [job] queue monitor thread has finished
[2026-01-08 19:05:34] 2026-01-08 18:04:40,497 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 19:05:34] 2026-01-08 18:04:40,522 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 19:05:34] 2026-01-08 18:04:40,608 | INFO     | [payload] failed_post thread has finished
[2026-01-08 19:05:34] 2026-01-08 18:04:40,730 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 19:05:34] 2026-01-08 18:04:41,068 | INFO     | [data] copytool_out thread has finished
[2026-01-08 19:05:34] 2026-01-08 18:04:44,507 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 19:05:34] 2026-01-08 18:05:06,180 | INFO     | PID=24313 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 19:05:34] 2026-01-08 18:05:06,180 | INFO     | .. there are 2 such processes running
[2026-01-08 19:05:34] 2026-01-08 18:05:06,180 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 19:05:34] 2026-01-08 18:05:06,180 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 19:05:34] 2026-01-08 18:05:06,181 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 19:05:34] 2026-01-08 18:05:23,905 | INFO     | [monitor] cgroup control has ended
[2026-01-08 19:05:34] 2026-01-08 18:05:24,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140510620903232)>', '<ExcThread(monitor, started 140509452433152)>']
[2026-01-08 19:05:34] 2026-01-08 18:05:24,288 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 19:05:34] 2026-01-08 18:05:24,289 | INFO     | [monitor] control thread has ended
[2026-01-08 19:05:34] 2026-01-08 18:05:29,202 | INFO     | all workflow threads have been joined
[2026-01-08 19:05:34] 2026-01-08 18:05:29,203 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 19:05:34] 2026-01-08 18:05:29,203 | INFO     | traces error code: 0
[2026-01-08 19:05:34] 2026-01-08 18:05:29,203 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 19:05:34] 2026-01-08 18:05:29,597 [wrapper] ==== pilot stdout END ====
[2026-01-08 19:05:34] 2026-01-08 18:05:29,665 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 19:05:34] 2026-01-08 18:05:29,794 [wrapper] pilotpid: 24313
[2026-01-08 19:05:34] 2026-01-08 18:05:29,923 [wrapper] Pilot exit status: 0
[2026-01-08 19:05:34] 2026-01-08 18:05:30,506 [wrapper] pandaids: 6962916127
[2026-01-08 19:05:34] 2026-01-08 18:05:31,611 [wrapper] cleanup supervisor_pilot 28298 24314
[2026-01-08 19:05:34] 2026-01-08 18:05:31,690 [wrapper] Test setup, not cleaning
[2026-01-08 19:05:34] 2026-01-08 18:05:31,750 [wrapper] apfmon messages muted
[2026-01-08 19:05:34] 2026-01-08 18:05:31,842 [wrapper] ==== wrapper stdout END ====
[2026-01-08 19:05:34] 2026-01-08 18:05:31,947 [wrapper] ==== wrapper stderr END ====
[2026-01-08 19:05:34]  *** Error codes and diagnostics ***
[2026-01-08 19:05:34]     "exeErrorCode": 0,
[2026-01-08 19:05:34]     "exeErrorDiag": "",
[2026-01-08 19:05:34]     "pilotErrorCode": 0,
[2026-01-08 19:05:34]     "pilotErrorDiag": "",
[2026-01-08 19:05:34]  *** Listing of results directory ***
[2026-01-08 19:05:34] total 443772
[2026-01-08 19:05:34] -rw-r--r--. 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-08 19:05:34] -rwx------. 1 boinc boinc     36322 Jan  8 09:03 runpilot2-wrapper.sh
[2026-01-08 19:05:34] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:05 queuedata.json
[2026-01-08 19:05:34] -rw-r--r--. 1 boinc boinc       100 Jan  8 13:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 19:05:34] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 13:20 run_atlas
[2026-01-08 19:05:34] -rw-r--r--. 1 boinc boinc       105 Jan  8 13:20 job.xml
[2026-01-08 19:05:34] -rw-r--r--. 1 boinc boinc      6392 Jan  8 13:20 init_data.xml
[2026-01-08 19:05:34] -rw-r--r--. 2 boinc boinc 224501802 Jan  8 13:20 EVNT.47898824._000446.pool.root.1
[2026-01-08 19:05:34] -rw-r--r--. 2 boinc boinc     15847 Jan  8 13:20 start_atlas.sh
[2026-01-08 19:05:34] drwxrwx--x. 2 boinc boinc        68 Jan  8 13:20 shared
[2026-01-08 19:05:34] -rw-r--r--. 2 boinc boinc    592396 Jan  8 13:20 input.tar.gz
[2026-01-08 19:05:34] -rw-r--r--. 1 boinc boinc         0 Jan  8 13:20 boinc_lockfile
[2026-01-08 19:05:34] -rw-r--r--. 1 boinc boinc      2518 Jan  8 13:20 pandaJob.out
[2026-01-08 19:05:34] -rw-------. 1 boinc boinc    989835 Jan  8 13:24 agis_schedconf.cvmfs.json
[2026-01-08 19:05:34] drwx------. 5 boinc boinc      4096 Jan  8 13:24 pilot3
[2026-01-08 19:05:34] -rw-------. 1 boinc boinc 219521695 Jan  8 19:01 HITS.47898826._018714.pool.root.1
[2026-01-08 19:05:34] -rw-r--r--. 1 boinc boinc       531 Jan  8 19:01 boinc_task_state.xml
[2026-01-08 19:05:34] -rw-------. 1 boinc boinc      1013 Jan  8 19:02 memory_monitor_summary.json
[2026-01-08 19:05:34] -rw-------. 1 boinc boinc   1516240 Jan  8 19:02 agis_ddmendpoints.agis.ALL.json
[2026-01-08 19:05:34] -rw-------. 1 boinc boinc    534615 Jan  8 19:02 log.47898826._018714.job.log.tgz.1
[2026-01-08 19:05:34] -rw-------. 1 boinc boinc        95 Jan  8 19:04 pilot_heartbeat.json
[2026-01-08 19:05:34] -rw-------. 1 boinc boinc      7776 Jan  8 19:04 heartbeat.json
[2026-01-08 19:05:34] -rw-r--r--. 1 boinc boinc        28 Jan  8 19:05 wrapper_checkpoint.txt
[2026-01-08 19:05:34] -rw-r--r--. 1 boinc boinc      8192 Jan  8 19:05 boinc_mmap_file
[2026-01-08 19:05:34] -rw-------. 1 boinc boinc      4885 Jan  8 19:05 pilotlog.txt
[2026-01-08 19:05:34] -rw-------. 1 boinc boinc   2713320 Jan  8 19:05 log.47898826._018714.job.log.1
[2026-01-08 19:05:34] -rw-------. 1 boinc boinc       357 Jan  8 19:05 output.list
[2026-01-08 19:05:34] -rw-r--r--. 1 boinc boinc       620 Jan  8 19:05 runtime_log
[2026-01-08 19:05:34] -rw-------. 1 boinc boinc   3266560 Jan  8 19:05 result.tar.gz
[2026-01-08 19:05:34] -rw-r--r--. 1 boinc boinc      8833 Jan  8 19:05 runtime_log.err
[2026-01-08 19:05:34] -rw-------. 1 boinc boinc       657 Jan  8 19:05 aTkKDmEA0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFPeKDmcUQVwm.diag
[2026-01-08 19:05:34] -rw-r--r--. 1 boinc boinc     20779 Jan  8 19:05 stderr.txt
[2026-01-08 19:05:34] HITS file was successfully produced:
[2026-01-08 19:05:34] -rw-------. 1 boinc boinc 219521695 Jan  8 19:01 shared/HITS.pool.root.1
[2026-01-08 19:05:34]  *** Contents of shared directory: ***
[2026-01-08 19:05:34] total 437412
[2026-01-08 19:05:34] -rw-r--r--. 2 boinc boinc 224501802 Jan  8 13:20 ATLAS.root_0
[2026-01-08 19:05:34] -rw-r--r--. 2 boinc boinc     15847 Jan  8 13:20 start_atlas.sh
[2026-01-08 19:05:34] -rw-r--r--. 2 boinc boinc    592396 Jan  8 13:20 input.tar.gz
[2026-01-08 19:05:34] -rw-------. 1 boinc boinc 219521695 Jan  8 19:01 HITS.pool.root.1
[2026-01-08 19:05:34] -rw-------. 1 boinc boinc   3266560 Jan  8 19:05 result.tar.gz
19:05:35 (20539): run_atlas exited; CPU time 74154.824329
19:05:35 (20539): called boinc_finish(0)

</stderr_txt>
]]>

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