Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:22:51 (17023): wrapper (7.7.26015): starting
15:22:51 (17023): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 15:22:51] Arguments: --nthreads 8
[2026-01-08 15:22:51] Threads: 8
[2026-01-08 15:22:51] Checking for CVMFS
[2026-01-08 15:22:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 15:22:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 15:22:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 15:22:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 15:22:55] 2.11.2.0 32209 34072 125568 154910 2 60 20022059 25165824 96 130560 0 16595574 99.821 9807177 4150 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 15:22:55] CVMFS is ok
[2026-01-08 15:22:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 15:22:55] Checking for apptainer binary...
[2026-01-08 15:22:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 15:22:55] Running /usr/bin/apptainer --version
[2026-01-08 15:22:55] apptainer version 1.3.2-1.el7
[2026-01-08 15:22:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 15:23:21] cg-vwn500.simple-grid.lan
[2026-01-08 15:23:21] apptainer works
[2026-01-08 15:23:21] Set ATHENA_PROC_NUMBER=8
[2026-01-08 15:23:21] Set ATHENA_CORE_NUMBER=8
[2026-01-08 15:23:21] Starting ATLAS job with PandaID=6962918179
[2026-01-08 15:23:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 21:17:32]  *** The last 200 lines of the pilot log: ***
[2026-01-08 21:17:32] 2026-01-08 20:16:18,579 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 21:17:32] 2026-01-08 20:16:18,579 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 21:17:32] 2026-01-08 20:16:18,579 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 21:17:32] 2026-01-08 20:16:18,579 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 21:17:32] 2026-01-08 20:16:18,586 | INFO     | fitting pss+swap vs Time
[2026-01-08 21:17:32] 2026-01-08 20:16:18,589 | INFO     | sum of square deviations: 11347200663.0
[2026-01-08 21:17:32] 2026-01-08 20:16:18,592 | INFO     | sum of deviations: 131662694538.49997
[2026-01-08 21:17:32] 2026-01-08 20:16:18,592 | INFO     | mean x: 1767893097.5
[2026-01-08 21:17:32] 2026-01-08 20:16:18,593 | INFO     | mean y: 2462038.68373494
[2026-01-08 21:17:32] 2026-01-08 20:16:18,593 | INFO     | intersect: -20510576884.814594
[2026-01-08 21:17:32] 2026-01-08 20:16:18,593 | INFO     | chi2: 6.960795208083899
[2026-01-08 21:17:32] 2026-01-08 20:16:18,594 | INFO     | sum of square deviations: 10842205148.0
[2026-01-08 21:17:32] 2026-01-08 20:16:18,597 | INFO     | sum of deviations: 151413705900.0
[2026-01-08 21:17:32] 2026-01-08 20:16:18,598 | INFO     | mean x: 1767892945.0
[2026-01-08 21:17:32] 2026-01-08 20:16:18,598 | INFO     | mean y: 2467921.516819572
[2026-01-08 21:17:32] 2026-01-08 20:16:18,598 | INFO     | intersect: -24686533880.509853
[2026-01-08 21:17:32] 2026-01-08 20:16:18,598 | INFO     | chi2: 6.232536779097021
[2026-01-08 21:17:32] 2026-01-08 20:16:18,598 | INFO     | current chi2=6.232536779097021 (change=10.462287816499998 %)
[2026-01-08 21:17:32] 2026-01-08 20:16:18,599 | INFO     | right removable region: 326
[2026-01-08 21:17:32] 2026-01-08 20:16:18,607 | INFO     | sum of square deviations: 10842205148.0
[2026-01-08 21:17:32] 2026-01-08 20:16:18,611 | INFO     | sum of deviations: 19134194092.999996
[2026-01-08 21:17:32] 2026-01-08 20:16:18,611 | INFO     | mean x: 1767893250.0
[2026-01-08 21:17:32] 2026-01-08 20:16:18,611 | INFO     | mean y: 2495998.5321100918
[2026-01-08 21:17:32] 2026-01-08 20:16:18,611 | INFO     | intersect: -3117460884.7265024
[2026-01-08 21:17:32] 2026-01-08 20:16:18,612 | INFO     | chi2: 2.516000599667364
[2026-01-08 21:17:32] 2026-01-08 20:16:18,612 | INFO     | current chi2=2.516000599667364 (change=63.854695843581 %)
[2026-01-08 21:17:32] 2026-01-08 20:16:18,613 | INFO     | sum of square deviations: 10352419220.5
[2026-01-08 21:17:32] 2026-01-08 20:16:18,616 | INFO     | sum of deviations: -43282014389.49997
[2026-01-08 21:17:32] 2026-01-08 20:16:18,616 | INFO     | mean x: 1767893402.5
[2026-01-08 21:17:32] 2026-01-08 20:16:18,616 | INFO     | mean y: 2515360.947204969
[2026-01-08 21:17:32] 2026-01-08 20:16:18,617 | INFO     | intersect: 7393829995.364743
[2026-01-08 21:17:32] 2026-01-08 20:16:18,617 | INFO     | chi2: 0.9625029594936988
[2026-01-08 21:17:32] 2026-01-08 20:16:18,617 | INFO     | current chi2=0.9625029594936988 (change=61.74472455924892 %)
[2026-01-08 21:17:32] 2026-01-08 20:16:18,618 | INFO     | sum of square deviations: 9877610318.0
[2026-01-08 21:17:32] 2026-01-08 20:16:18,621 | INFO     | sum of deviations: -43810487554.00001
[2026-01-08 21:17:32] 2026-01-08 20:16:18,628 | INFO     | mean x: 1767893555.0
[2026-01-08 21:17:32] 2026-01-08 20:16:18,628 | INFO     | mean y: 2515509.4416403784
[2026-01-08 21:17:32] 2026-01-08 20:16:18,629 | INFO     | intersect: 7843711516.8385725
[2026-01-08 21:17:32] 2026-01-08 20:16:18,629 | INFO     | chi2: 0.9408657365441643
[2026-01-08 21:17:32] 2026-01-08 20:16:18,629 | INFO     | current chi2=0.9408657365441643 (change=2.248016251390671 %)
[2026-01-08 21:17:32] 2026-01-08 20:16:18,629 | INFO     | left removable region: 30
[2026-01-08 21:17:32] 2026-01-08 20:16:18,630 | INFO     | sum of square deviations: 8041713570.0
[2026-01-08 21:17:32] 2026-01-08 20:16:18,633 | INFO     | sum of deviations: 9828037966.499996
[2026-01-08 21:17:32] 2026-01-08 20:16:18,633 | INFO     | mean x: 1767893829.5
[2026-01-08 21:17:32] 2026-01-08 20:16:18,633 | INFO     | mean y: 2511043.293918919
[2026-01-08 21:17:32] 2026-01-08 20:16:18,633 | INFO     | intersect: -2158089123.0543423
[2026-01-08 21:17:32] 2026-01-08 20:16:18,634 | INFO     | chi2: 0.037355788414824016
[2026-01-08 21:17:32] 2026-01-08 20:16:18,634 | INFO     | current memory leak: 1.22 B/s (using 296 data points, chi2=0.04)
[2026-01-08 21:17:32] 2026-01-08 20:16:18,635 | INFO     | could have reported an average CPU frequency of 2249 MHz (14 samples)
[2026-01-08 21:17:32] 2026-01-08 20:16:18,635 | INFO     | ..............................
[2026-01-08 21:17:32] 2026-01-08 20:16:18,635 | INFO     | . Timing measurements:
[2026-01-08 21:17:32] 2026-01-08 20:16:18,635 | INFO     | . get job = 0 s
[2026-01-08 21:17:32] 2026-01-08 20:16:18,635 | INFO     | . initial setup = 10 s
[2026-01-08 21:17:32] 2026-01-08 20:16:18,635 | INFO     | . payload setup = 150 s
[2026-01-08 21:17:32] 2026-01-08 20:16:18,635 | INFO     | . stage-in = 0 s
[2026-01-08 21:17:32] 2026-01-08 20:16:18,636 | INFO     | . payload execution = 20416 s
[2026-01-08 21:17:32] 2026-01-08 20:16:18,636 | INFO     | . stage-out = 4 s
[2026-01-08 21:17:32] 2026-01-08 20:16:18,636 | INFO     | . log creation = 1 s
[2026-01-08 21:17:32] 2026-01-08 20:16:18,636 | INFO     | ..............................
[2026-01-08 21:17:32] 2026-01-08 20:16:18,919 | INFO     | 
[2026-01-08 21:17:32] 2026-01-08 20:16:18,920 | INFO     | job summary report
[2026-01-08 21:17:32] 2026-01-08 20:16:18,920 | INFO     | --------------------------------------------------
[2026-01-08 21:17:32] 2026-01-08 20:16:18,920 | INFO     | PanDA job id: 6962918179
[2026-01-08 21:17:32] 2026-01-08 20:16:18,920 | INFO     | task id: 47898826
[2026-01-08 21:17:32] 2026-01-08 20:16:18,920 | INFO     | errors: (none)
[2026-01-08 21:17:32] 2026-01-08 20:16:18,920 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 21:17:32] 2026-01-08 20:16:18,920 | INFO     | pilot state: finished 
[2026-01-08 21:17:32] 2026-01-08 20:16:18,920 | INFO     | transexitcode: 0
[2026-01-08 21:17:32] 2026-01-08 20:16:18,920 | INFO     | exeerrorcode: 0
[2026-01-08 21:17:32] 2026-01-08 20:16:18,920 | INFO     | exeerrordiag: 
[2026-01-08 21:17:32] 2026-01-08 20:16:18,921 | INFO     | exitcode: 0
[2026-01-08 21:17:32] 2026-01-08 20:16:18,921 | INFO     | exitmsg: OK
[2026-01-08 21:17:32] 2026-01-08 20:16:18,921 | INFO     | cpuconsumptiontime: 76984 s
[2026-01-08 21:17:32] 2026-01-08 20:16:18,921 | INFO     | nevents: 400
[2026-01-08 21:17:32] 2026-01-08 20:16:18,921 | INFO     | neventsw: 0
[2026-01-08 21:17:32] 2026-01-08 20:16:18,921 | INFO     | pid: 27215
[2026-01-08 21:17:32] 2026-01-08 20:16:18,921 | INFO     | pgrp: 27215
[2026-01-08 21:17:32] 2026-01-08 20:16:18,921 | INFO     | corecount: 8
[2026-01-08 21:17:32] 2026-01-08 20:16:18,921 | INFO     | event service: False
[2026-01-08 21:17:32] 2026-01-08 20:16:18,921 | INFO     | sizes: {0: 2283135, 1: 2283820, 2: 2284019, 13: 2284019, 23: 2284075, 34: 2284103, 45: 2284259, 55: 2284287, 66: 2284315, 77: 2284343, 88: 2284399, 98: 2284707, 10
[2026-01-08 21:17:32] 2026-01-08 20:16:18,922 | INFO     | --------------------------------------------------
[2026-01-08 21:17:32] 2026-01-08 20:16:18,922 | INFO     | 
[2026-01-08 21:17:32] 2026-01-08 20:16:18,922 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-08 21:17:32] 2026-01-08 20:16:18,984 | INFO     | time since job start (20913s) is within the limit (174528.0s)
[2026-01-08 21:17:32] 2026-01-08 20:16:19,514 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 21:17:32] 2026-01-08 20:16:19,514 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 21:17:32] 2026-01-08 20:16:19,514 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 21:17:32] 2026-01-08 20:16:19,514 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 21:17:32] 2026-01-08 20:16:19,514 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 21:17:32] 2026-01-08 20:16:19,514 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 21:17:32] 2026-01-08 20:16:19,515 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 21:17:32] 2026-01-08 20:16:19,515 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 21:17:32] 2026-01-08 20:16:19,515 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 21:17:32] 2026-01-08 20:16:19,515 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 21:17:32] 2026-01-08 20:16:19,515 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 21:17:32] 2026-01-08 20:16:19,515 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 21:17:32] 2026-01-08 20:16:19,515 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 21:17:32] 2026-01-08 20:16:19,515 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 21:17:32] 2026-01-08 20:16:19,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 21:17:32] 2026-01-08 20:16:19,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 21:17:32] 2026-01-08 20:16:19,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 21:17:32] 2026-01-08 20:16:19,516 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 21:17:32] 2026-01-08 20:16:19,516 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 21:17:32] 2026-01-08 20:16:19,516 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 21:17:32] 2026-01-08 20:16:19,516 | INFO     | job 6962918179 has completed (purged errors)
[2026-01-08 21:17:32] 2026-01-08 20:16:19,516 | INFO     | overall cleanup function is called
[2026-01-08 21:17:32] 2026-01-08 20:16:20,083 | INFO     | PID=20761 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 21:17:32] 2026-01-08 20:16:20,083 | INFO     | .. there are 2 such processes running
[2026-01-08 21:17:32] 2026-01-08 20:16:20,524 | INFO     | --- collectZombieJob: --- 10, [27215]
[2026-01-08 21:17:32] 2026-01-08 20:16:20,525 | INFO     | zombie collector waiting for pid 27215
[2026-01-08 21:17:32] 2026-01-08 20:16:20,525 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 21:17:32] 2026-01-08 20:16:20,525 | INFO     | collected zombie processes
[2026-01-08 21:17:32] 2026-01-08 20:16:20,525 | INFO     | will attempt to kill all subprocesses of pid=27215
[2026-01-08 21:17:32] 2026-01-08 20:16:20,615 | INFO     | process IDs to be killed: [27215] (in reverse order)
[2026-01-08 21:17:32] 2026-01-08 20:16:21,556 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 21:17:32] 2026-01-08 20:16:21,556 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 21:17:32] 2026-01-08 20:16:21,558 | INFO     | did not find any defunct processes belonging to 27215
[2026-01-08 21:17:32] 2026-01-08 20:16:21,560 | INFO     | did not find any defunct processes belonging to 27215
[2026-01-08 21:17:32] 2026-01-08 20:16:21,560 | INFO     | ready for new job
[2026-01-08 21:17:32] 2026-01-08 20:16:21,560 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 21:17:32] 2026-01-08 20:16:21,563 | INFO     | ***************************************
[2026-01-08 21:17:32] 2026-01-08 20:16:21,563 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 21:17:32] 2026-01-08 20:16:21,563 | INFO     | ***************************************
[2026-01-08 21:17:32] 2026-01-08 20:16:21,563 | INFO     | 
[2026-01-08 21:17:32] 2026-01-08 20:16:21,564 | INFO     | pilot is running in a VM
[2026-01-08 21:17:32] 2026-01-08 20:16:21,564 | INFO     | architecture information:
[2026-01-08 21:17:32] 2026-01-08 20:16:21,577 | INFO     | executing command: cat /etc/os-release
[2026-01-08 21:17:32] 2026-01-08 20:16:21,907 | INFO     | cat /etc/os-release:
[2026-01-08 21:17:32] NAME="CentOS Linux"
[2026-01-08 21:17:32] VERSION="7 (Core)"
[2026-01-08 21:17:32] ID="centos"
[2026-01-08 21:17:32] ID_LIKE="rhel fedora"
[2026-01-08 21:17:32] VERSION_ID="7"
[2026-01-08 21:17:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 21:17:32] ANSI_COLOR="0;31"
[2026-01-08 21:17:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 21:17:32] HOME_URL="https://www.centos.org/"
[2026-01-08 21:17:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 21:17:32] 
[2026-01-08 21:17:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 21:17:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 21:17:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 21:17:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 21:17:32] 
[2026-01-08 21:17:32] 2026-01-08 20:16:21,907 | INFO     | ***************************************
[2026-01-08 21:17:32] 2026-01-08 20:16:22,410 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-08 21:17:32] 2026-01-08 20:16:22,655 | INFO     | sufficient remaining disk space (496627613696 B)
[2026-01-08 21:17:32] 2026-01-08 20:16:22,655 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 21:17:32] 2026-01-08 20:16:22,655 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 21:17:32] 2026-01-08 20:16:22,656 | INFO     | update_server=False
[2026-01-08 21:17:32] 2026-01-08 20:16:22,656 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 21:17:32] 2026-01-08 20:16:22,708 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 21:17:32] 2026-01-08 20:16:22,709 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 21:17:32] 2026-01-08 20:16:22,709 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:17:32] 2026-01-08 20:16:22,709 | INFO     | will abort loop
[2026-01-08 21:17:32] 2026-01-08 20:16:22,793 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 21:17:32] 2026-01-08 20:16:22,953 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 21:17:32] 2026-01-08 20:16:23,266 | INFO     | all data control threads have been joined
[2026-01-08 21:17:32] 2026-01-08 20:16:23,568 | INFO     | all payload control threads have been joined
[2026-01-08 21:17:32] 2026-01-08 20:16:23,661 | INFO     | [job] retrieve thread has finished
[2026-01-08 21:17:32] 2026-01-08 20:16:23,678 | INFO     | [job] validate thread has finished
[2026-01-08 21:17:32] 2026-01-08 20:16:23,710 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 21:17:32] 2026-01-08 20:16:23,714 | INFO     | [job] job monitor thread has finished
[2026-01-08 21:17:32] 2026-01-08 20:16:23,801 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:17:32] 2026-01-08 20:16:23,953 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 21:17:32] 2026-01-08 20:16:24,011 | INFO     | [payload] validate_post thread has finished
[2026-01-08 21:17:32] 2026-01-08 20:16:24,086 | INFO     | [data] copytool_in thread has finished
[2026-01-08 21:17:32] 2026-01-08 20:16:24,272 | INFO     | [data] control thread has finished
[2026-01-08 21:17:32] 2026-01-08 20:16:24,325 | INFO     | all job control threads have been joined
[2026-01-08 21:17:32] 2026-01-08 20:16:24,557 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 21:17:32] 2026-01-08 20:16:24,574 | INFO     | [payload] control thread has finished
[2026-01-08 21:17:32] 2026-01-08 20:16:24,629 | INFO     | [payload] failed_post thread has finished
[2026-01-08 21:17:32] 2026-01-08 20:16:24,800 | INFO     | [data] copytool_out thread has finished
[2026-01-08 21:17:32] 2026-01-08 20:16:24,807 | INFO     | [job] queue monitor thread has finished
[2026-01-08 21:17:32] 2026-01-08 20:16:24,821 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 21:17:32] 2026-01-08 20:16:25,331 | INFO     | [job] control thread has finished
[2026-01-08 21:17:32] 2026-01-08 20:16:26,962 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 21:17:32] 2026-01-08 20:16:52,208 | INFO     | PID=20761 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 21:17:32] 2026-01-08 20:16:52,208 | INFO     | .. there are 2 such processes running
[2026-01-08 21:17:32] 2026-01-08 20:16:52,209 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 21:17:32] 2026-01-08 20:16:52,209 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 21:17:32] 2026-01-08 20:16:52,210 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 21:17:32] 2026-01-08 20:17:20,419 | INFO     | [monitor] cgroup control has ended
[2026-01-08 21:17:32] 2026-01-08 20:17:21,730 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139930261489472)>', '<ExcThread(monitor, started 139929682171648)>']
[2026-01-08 21:17:32] 2026-01-08 20:17:22,389 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 21:17:32] 2026-01-08 20:17:22,390 | INFO     | [monitor] control thread has ended
[2026-01-08 21:17:32] 2026-01-08 20:17:26,756 | INFO     | all workflow threads have been joined
[2026-01-08 21:17:32] 2026-01-08 20:17:26,757 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 21:17:32] 2026-01-08 20:17:26,757 | INFO     | traces error code: 0
[2026-01-08 21:17:32] 2026-01-08 20:17:26,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 21:17:32] 2026-01-08 20:17:27,185 [wrapper] ==== pilot stdout END ====
[2026-01-08 21:17:32] 2026-01-08 20:17:27,315 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 21:17:32] 2026-01-08 20:17:27,405 [wrapper] pilotpid: 20761
[2026-01-08 21:17:32] 2026-01-08 20:17:27,517 [wrapper] Pilot exit status: 0
[2026-01-08 21:17:32] 2026-01-08 20:17:27,976 [wrapper] pandaids: 6962918179
[2026-01-08 21:17:32] 2026-01-08 20:17:29,063 [wrapper] cleanup supervisor_pilot 26417 20762
[2026-01-08 21:17:32] 2026-01-08 20:17:29,124 [wrapper] Test setup, not cleaning
[2026-01-08 21:17:32] 2026-01-08 20:17:29,254 [wrapper] apfmon messages muted
[2026-01-08 21:17:32] 2026-01-08 20:17:29,356 [wrapper] ==== wrapper stdout END ====
[2026-01-08 21:17:32] 2026-01-08 20:17:29,466 [wrapper] ==== wrapper stderr END ====
[2026-01-08 21:17:32]  *** Error codes and diagnostics ***
[2026-01-08 21:17:32]     "exeErrorCode": 0,
[2026-01-08 21:17:32]     "exeErrorDiag": "",
[2026-01-08 21:17:32]     "pilotErrorCode": 0,
[2026-01-08 21:17:32]     "pilotErrorDiag": "",
[2026-01-08 21:17:32]  *** Listing of results directory ***
[2026-01-08 21:17:32] total 447488
[2026-01-08 21:17:32] -rw-r--r--. 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-08 21:17:32] -rwx------. 1 boinc boinc     36322 Jan  8 09:02 runpilot2-wrapper.sh
[2026-01-08 21:17:32] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:04 queuedata.json
[2026-01-08 21:17:32] -rw-r--r--. 1 boinc boinc       100 Jan  8 15:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 21:17:32] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 15:22 run_atlas
[2026-01-08 21:17:32] -rw-r--r--. 1 boinc boinc       105 Jan  8 15:22 job.xml
[2026-01-08 21:17:32] -rw-r--r--. 2 boinc boinc 224075575 Jan  8 15:22 EVNT.47898824._000786.pool.root.1
[2026-01-08 21:17:32] -rw-r--r--. 2 boinc boinc     15847 Jan  8 15:22 start_atlas.sh
[2026-01-08 21:17:32] drwxrwx--x. 2 boinc boinc        68 Jan  8 15:22 shared
[2026-01-08 21:17:32] -rw-r--r--. 2 boinc boinc    592399 Jan  8 15:22 input.tar.gz
[2026-01-08 21:17:32] -rw-r--r--. 1 boinc boinc      6390 Jan  8 15:22 init_data.xml
[2026-01-08 21:17:32] -rw-r--r--. 1 boinc boinc         0 Jan  8 15:22 boinc_lockfile
[2026-01-08 21:17:32] -rw-r--r--. 1 boinc boinc      2516 Jan  8 15:23 pandaJob.out
[2026-01-08 21:17:32] -rw-------. 1 boinc boinc    989835 Jan  8 15:27 agis_schedconf.cvmfs.json
[2026-01-08 21:17:32] drwx------. 5 boinc boinc      4096 Jan  8 15:27 pilot3
[2026-01-08 21:17:32] -rw-------. 1 boinc boinc 223657303 Jan  8 21:12 HITS.47898826._020250.pool.root.1
[2026-01-08 21:17:32] -rw-r--r--. 1 boinc boinc       531 Jan  8 21:13 boinc_task_state.xml
[2026-01-08 21:17:32] -rw-------. 1 boinc boinc      1012 Jan  8 21:14 memory_monitor_summary.json
[2026-01-08 21:17:32] -rw-------. 1 boinc boinc   1516240 Jan  8 21:14 agis_ddmendpoints.agis.ALL.json
[2026-01-08 21:17:32] -rw-------. 1 boinc boinc    524614 Jan  8 21:14 log.47898826._020250.job.log.tgz.1
[2026-01-08 21:17:32] -rw-------. 1 boinc boinc      7782 Jan  8 21:16 heartbeat.json
[2026-01-08 21:17:32] -rw-------. 1 boinc boinc        95 Jan  8 21:16 pilot_heartbeat.json
[2026-01-08 21:17:32] -rw-r--r--. 1 boinc boinc        28 Jan  8 21:17 wrapper_checkpoint.txt
[2026-01-08 21:17:32] -rw-r--r--. 1 boinc boinc      8192 Jan  8 21:17 boinc_mmap_file
[2026-01-08 21:17:32] -rw-------. 1 boinc boinc      5070 Jan  8 21:17 pilotlog.txt
[2026-01-08 21:17:32] -rw-------. 1 boinc boinc   2776087 Jan  8 21:17 log.47898826._020250.job.log.1
[2026-01-08 21:17:32] -rw-------. 1 boinc boinc       357 Jan  8 21:17 output.list
[2026-01-08 21:17:32] -rw-r--r--. 1 boinc boinc       620 Jan  8 21:17 runtime_log
[2026-01-08 21:17:32] -rw-------. 1 boinc boinc   3317760 Jan  8 21:17 result.tar.gz
[2026-01-08 21:17:32] -rw-r--r--. 1 boinc boinc      8817 Jan  8 21:17 runtime_log.err
[2026-01-08 21:17:32] -rw-------. 1 boinc boinc       656 Jan  8 21:17 dufKDmj9zx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvOeKDm5I4tVn.diag
[2026-01-08 21:17:32] -rw-r--r--. 1 boinc boinc     20849 Jan  8 21:17 stderr.txt
[2026-01-08 21:17:32] HITS file was successfully produced:
[2026-01-08 21:17:32] -rw-------. 1 boinc boinc 223657303 Jan  8 21:12 shared/HITS.pool.root.1
[2026-01-08 21:17:32]  *** Contents of shared directory: ***
[2026-01-08 21:17:32] total 441076
[2026-01-08 21:17:32] -rw-r--r--. 2 boinc boinc 224075575 Jan  8 15:22 ATLAS.root_0
[2026-01-08 21:17:32] -rw-r--r--. 2 boinc boinc     15847 Jan  8 15:22 start_atlas.sh
[2026-01-08 21:17:32] -rw-r--r--. 2 boinc boinc    592399 Jan  8 15:22 input.tar.gz
[2026-01-08 21:17:32] -rw-------. 1 boinc boinc 223657303 Jan  8 21:12 HITS.pool.root.1
[2026-01-08 21:17:32] -rw-------. 1 boinc boinc   3317760 Jan  8 21:17 result.tar.gz
21:17:34 (17023): run_atlas exited; CPU time 77184.238436
21:17:34 (17023): called boinc_finish(0)

</stderr_txt>
]]>

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