Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:11:56 (16831): wrapper (7.7.26015): starting
16:11:56 (16831): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 16:11:56] Arguments: --nthreads 8
[2026-01-08 16:11:56] Threads: 8
[2026-01-08 16:11:56] Checking for CVMFS
[2026-01-08 16:11:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 16:11:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 16:11:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 16:11:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 16:11:59] 2.11.2.0 30928 34121 125020 154911 2 60 21627733 25165824 96 130560 0 16425881 99.795 13663962 3028 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 16:11:59] CVMFS is ok
[2026-01-08 16:11:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 16:11:59] Checking for apptainer binary...
[2026-01-08 16:11:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 16:11:59] Running /usr/bin/apptainer --version
[2026-01-08 16:11:59] apptainer version 1.3.2-1.el7
[2026-01-08 16:11:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 16:12:26] cg-vwn464.simple-grid.lan
[2026-01-08 16:12:26] apptainer works
[2026-01-08 16:12:26] Set ATHENA_PROC_NUMBER=8
[2026-01-08 16:12:26] Set ATHENA_CORE_NUMBER=8
[2026-01-08 16:12:26] Starting ATLAS job with PandaID=6962915923
[2026-01-08 16:12:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 21:53:24]  *** The last 200 lines of the pilot log: ***
[2026-01-08 21:53:24] 2026-01-08 20:52:26,578 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 21:53:24] 2026-01-08 20:52:26,579 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-08 21:53:24] 2026-01-08 20:52:26,581 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6962915923/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 21:53:24] 2026-01-08 20:52:26,581 | INFO     | extracted standard info from prmon json
[2026-01-08 21:53:24] 2026-01-08 20:52:26,582 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 21:53:24] 2026-01-08 20:52:26,582 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 21:53:24] 2026-01-08 20:52:26,582 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 21:53:24] 2026-01-08 20:52:26,582 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 21:53:24] 2026-01-08 20:52:26,588 | INFO     | fitting pss+swap vs Time
[2026-01-08 21:53:24] 2026-01-08 20:52:26,589 | INFO     | sum of square deviations: 10160711440.0
[2026-01-08 21:53:24] 2026-01-08 20:52:26,606 | INFO     | sum of deviations: 109410414106.0
[2026-01-08 21:53:24] 2026-01-08 20:52:26,607 | INFO     | mean x: 1767895669.5
[2026-01-08 21:53:24] 2026-01-08 20:52:26,607 | INFO     | mean y: 2457735.13125
[2026-01-08 21:53:24] 2026-01-08 20:52:26,607 | INFO     | intersect: -19034220792.58798
[2026-01-08 21:53:24] 2026-01-08 20:52:26,608 | INFO     | chi2: 7.698613675229808
[2026-01-08 21:53:24] 2026-01-08 20:52:26,608 | INFO     | sum of square deviations: 9691828230.0
[2026-01-08 21:53:24] 2026-01-08 20:52:26,611 | INFO     | sum of deviations: 128700565434.99997
[2026-01-08 21:53:24] 2026-01-08 20:52:26,612 | INFO     | mean x: 1767895517.0
[2026-01-08 21:53:24] 2026-01-08 20:52:26,612 | INFO     | mean y: 2463921.8253968256
[2026-01-08 21:53:24] 2026-01-08 20:52:26,612 | INFO     | intersect: -23473927453.29306
[2026-01-08 21:53:24] 2026-01-08 20:52:26,612 | INFO     | chi2: 6.9842995101620975
[2026-01-08 21:53:24] 2026-01-08 20:52:26,613 | INFO     | current chi2=6.9842995101620975 (change=9.278477855902905 %)
[2026-01-08 21:53:24] 2026-01-08 20:52:26,613 | INFO     | right removable region: 314
[2026-01-08 21:53:24] 2026-01-08 20:52:26,613 | INFO     | sum of square deviations: 9691828230.0
[2026-01-08 21:53:24] 2026-01-08 20:52:26,616 | INFO     | sum of deviations: 4598424.0
[2026-01-08 21:53:24] 2026-01-08 20:52:26,616 | INFO     | mean x: 1767895822.0
[2026-01-08 21:53:24] 2026-01-08 20:52:26,617 | INFO     | mean y: 2493297.015873016
[2026-01-08 21:53:24] 2026-01-08 20:52:26,617 | INFO     | intersect: 1654494.0176708358
[2026-01-08 21:53:24] 2026-01-08 20:52:26,617 | INFO     | chi2: 3.0783028440794347
[2026-01-08 21:53:24] 2026-01-08 20:52:26,617 | INFO     | current chi2=3.0783028440794347 (change=60.01484197104428 %)
[2026-01-08 21:53:24] 2026-01-08 20:52:26,618 | INFO     | sum of square deviations: 9237596457.5
[2026-01-08 21:53:24] 2026-01-08 20:52:26,621 | INFO     | sum of deviations: -70274285273.5
[2026-01-08 21:53:24] 2026-01-08 20:52:26,621 | INFO     | mean x: 1767895974.5
[2026-01-08 21:53:24] 2026-01-08 20:52:26,621 | INFO     | mean y: 2516824.370967742
[2026-01-08 21:53:24] 2026-01-08 20:52:26,621 | INFO     | intersect: 13451645785.29422
[2026-01-08 21:53:24] 2026-01-08 20:52:26,622 | INFO     | chi2: 1.0521138657504432
[2026-01-08 21:53:24] 2026-01-08 20:52:26,622 | INFO     | current chi2=1.0521138657504432 (change=65.82162577752881 %)
[2026-01-08 21:53:24] 2026-01-08 20:52:26,623 | INFO     | sum of square deviations: 8797783560.0
[2026-01-08 21:53:24] 2026-01-08 20:52:26,625 | INFO     | sum of deviations: -77672568006.99997
[2026-01-08 21:53:24] 2026-01-08 20:52:26,626 | INFO     | mean x: 1767896127.0
[2026-01-08 21:53:24] 2026-01-08 20:52:26,626 | INFO     | mean y: 2519377.8918032786
[2026-01-08 21:53:24] 2026-01-08 20:52:26,626 | INFO     | intersect: 15610658770.868568
[2026-01-08 21:53:24] 2026-01-08 20:52:26,626 | INFO     | chi2: 1.0073194342099625
[2026-01-08 21:53:24] 2026-01-08 20:52:26,627 | INFO     | current chi2=1.0073194342099625 (change=4.257564984045722 %)
[2026-01-08 21:53:24] 2026-01-08 20:52:26,627 | INFO     | left removable region: 30
[2026-01-08 21:53:24] 2026-01-08 20:52:26,627 | INFO     | sum of square deviations: 7102775035.0
[2026-01-08 21:53:24] 2026-01-08 20:52:26,630 | INFO     | sum of deviations: -34302006505.5
[2026-01-08 21:53:24] 2026-01-08 20:52:26,630 | INFO     | mean x: 1767896401.5
[2026-01-08 21:53:24] 2026-01-08 20:52:26,630 | INFO     | mean y: 2518369.48943662
[2026-01-08 21:53:24] 2026-01-08 20:52:26,630 | INFO     | intersect: 8540363587.235804
[2026-01-08 21:53:24] 2026-01-08 20:52:26,631 | INFO     | chi2: 0.173308701308378
[2026-01-08 21:53:24] 2026-01-08 20:52:26,631 | INFO     | current memory leak: -4.83 B/s (using 284 data points, chi2=0.17)
[2026-01-08 21:53:24] 2026-01-08 20:52:26,632 | INFO     | could have reported an average CPU frequency of 2250 MHz (14 samples)
[2026-01-08 21:53:24] 2026-01-08 20:52:26,632 | INFO     | ..............................
[2026-01-08 21:53:24] 2026-01-08 20:52:26,632 | INFO     | . Timing measurements:
[2026-01-08 21:53:24] 2026-01-08 20:52:26,632 | INFO     | . get job = 0 s
[2026-01-08 21:53:24] 2026-01-08 20:52:26,632 | INFO     | . initial setup = 11 s
[2026-01-08 21:53:24] 2026-01-08 20:52:26,632 | INFO     | . payload setup = 148 s
[2026-01-08 21:53:24] 2026-01-08 20:52:26,632 | INFO     | . stage-in = 0 s
[2026-01-08 21:53:24] 2026-01-08 20:52:26,632 | INFO     | . payload execution = 19671 s
[2026-01-08 21:53:24] 2026-01-08 20:52:26,633 | INFO     | . stage-out = 4 s
[2026-01-08 21:53:24] 2026-01-08 20:52:26,633 | INFO     | . log creation = 1 s
[2026-01-08 21:53:24] 2026-01-08 20:52:26,633 | INFO     | ..............................
[2026-01-08 21:53:24] 2026-01-08 20:52:26,752 | INFO     | 
[2026-01-08 21:53:24] 2026-01-08 20:52:26,752 | INFO     | job summary report
[2026-01-08 21:53:24] 2026-01-08 20:52:26,752 | INFO     | --------------------------------------------------
[2026-01-08 21:53:24] 2026-01-08 20:52:26,752 | INFO     | PanDA job id: 6962915923
[2026-01-08 21:53:24] 2026-01-08 20:52:26,752 | INFO     | task id: 47898826
[2026-01-08 21:53:24] 2026-01-08 20:52:26,752 | INFO     | errors: (none)
[2026-01-08 21:53:24] 2026-01-08 20:52:26,752 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 21:53:24] 2026-01-08 20:52:26,753 | INFO     | pilot state: finished 
[2026-01-08 21:53:24] 2026-01-08 20:52:26,753 | INFO     | transexitcode: 0
[2026-01-08 21:53:24] 2026-01-08 20:52:26,753 | INFO     | exeerrorcode: 0
[2026-01-08 21:53:24] 2026-01-08 20:52:26,753 | INFO     | exeerrordiag: 
[2026-01-08 21:53:24] 2026-01-08 20:52:26,753 | INFO     | exitcode: 0
[2026-01-08 21:53:24] 2026-01-08 20:52:26,753 | INFO     | exitmsg: OK
[2026-01-08 21:53:24] 2026-01-08 20:52:26,753 | INFO     | cpuconsumptiontime: 73384 s
[2026-01-08 21:53:24] 2026-01-08 20:52:26,753 | INFO     | nevents: 400
[2026-01-08 21:53:24] 2026-01-08 20:52:26,753 | INFO     | neventsw: 0
[2026-01-08 21:53:24] 2026-01-08 20:52:26,753 | INFO     | pid: 27018
[2026-01-08 21:53:24] 2026-01-08 20:52:26,753 | INFO     | pgrp: 27018
[2026-01-08 21:53:24] 2026-01-08 20:52:26,754 | INFO     | corecount: 8
[2026-01-08 21:53:24] 2026-01-08 20:52:26,754 | INFO     | event service: False
[2026-01-08 21:53:24] 2026-01-08 20:52:26,754 | INFO     | sizes: {0: 2283140, 1: 2283997, 2: 2284025, 12: 2284025, 23: 2284053, 34: 2284081, 44: 2284237, 55: 2284265, 66: 2284293, 77: 2284321, 87: 2284377, 98: 2284685, 10
[2026-01-08 21:53:24] 2026-01-08 20:52:26,754 | INFO     | --------------------------------------------------
[2026-01-08 21:53:24] 2026-01-08 20:52:26,754 | INFO     | 
[2026-01-08 21:53:24] 2026-01-08 20:52:26,754 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-01-08 21:53:24] 2026-01-08 20:52:27,208 | INFO     | time since job start (20148s) is within the limit (174528.0s)
[2026-01-08 21:53:24] 2026-01-08 20:52:27,394 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 21:53:24] 2026-01-08 20:52:27,394 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 21:53:24] 2026-01-08 20:52:27,394 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 21:53:24] 2026-01-08 20:52:27,394 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 21:53:24] 2026-01-08 20:52:27,395 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 21:53:24] 2026-01-08 20:52:27,395 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 21:53:24] 2026-01-08 20:52:27,395 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 21:53:24] 2026-01-08 20:52:27,395 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 21:53:24] 2026-01-08 20:52:27,395 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 21:53:24] 2026-01-08 20:52:27,395 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 21:53:24] 2026-01-08 20:52:27,395 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 21:53:24] 2026-01-08 20:52:27,395 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 21:53:24] 2026-01-08 20:52:27,395 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 21:53:24] 2026-01-08 20:52:27,395 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 21:53:24] 2026-01-08 20:52:27,396 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 21:53:24] 2026-01-08 20:52:27,396 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 21:53:24] 2026-01-08 20:52:27,396 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 21:53:24] 2026-01-08 20:52:27,396 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 21:53:24] 2026-01-08 20:52:27,396 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 21:53:24] 2026-01-08 20:52:27,396 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 21:53:24] 2026-01-08 20:52:27,396 | INFO     | job 6962915923 has completed (purged errors)
[2026-01-08 21:53:24] 2026-01-08 20:52:27,397 | INFO     | overall cleanup function is called
[2026-01-08 21:53:24] 2026-01-08 20:52:28,405 | INFO     | --- collectZombieJob: --- 10, [27018]
[2026-01-08 21:53:24] 2026-01-08 20:52:28,406 | INFO     | zombie collector waiting for pid 27018
[2026-01-08 21:53:24] 2026-01-08 20:52:28,406 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 21:53:24] 2026-01-08 20:52:28,406 | INFO     | collected zombie processes
[2026-01-08 21:53:24] 2026-01-08 20:52:28,406 | INFO     | will attempt to kill all subprocesses of pid=27018
[2026-01-08 21:53:24] 2026-01-08 20:52:28,475 | INFO     | process IDs to be killed: [27018] (in reverse order)
[2026-01-08 21:53:24] 2026-01-08 20:52:29,387 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 21:53:24] 2026-01-08 20:52:29,387 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 21:53:24] 2026-01-08 20:52:29,389 | INFO     | did not find any defunct processes belonging to 27018
[2026-01-08 21:53:24] 2026-01-08 20:52:29,392 | INFO     | did not find any defunct processes belonging to 27018
[2026-01-08 21:53:24] 2026-01-08 20:52:29,392 | INFO     | ready for new job
[2026-01-08 21:53:24] 2026-01-08 20:52:29,392 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 21:53:24] 2026-01-08 20:52:29,394 | INFO     | ***************************************
[2026-01-08 21:53:24] 2026-01-08 20:52:29,395 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 21:53:24] 2026-01-08 20:52:29,395 | INFO     | ***************************************
[2026-01-08 21:53:24] 2026-01-08 20:52:29,395 | INFO     | 
[2026-01-08 21:53:24] 2026-01-08 20:52:29,395 | INFO     | pilot is running in a VM
[2026-01-08 21:53:24] 2026-01-08 20:52:29,396 | INFO     | architecture information:
[2026-01-08 21:53:24] 2026-01-08 20:52:29,412 | INFO     | executing command: cat /etc/os-release
[2026-01-08 21:53:24] 2026-01-08 20:52:29,729 | INFO     | cat /etc/os-release:
[2026-01-08 21:53:24] NAME="CentOS Linux"
[2026-01-08 21:53:24] VERSION="7 (Core)"
[2026-01-08 21:53:24] ID="centos"
[2026-01-08 21:53:24] ID_LIKE="rhel fedora"
[2026-01-08 21:53:24] VERSION_ID="7"
[2026-01-08 21:53:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 21:53:24] ANSI_COLOR="0;31"
[2026-01-08 21:53:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 21:53:24] HOME_URL="https://www.centos.org/"
[2026-01-08 21:53:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 21:53:24] 
[2026-01-08 21:53:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 21:53:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 21:53:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 21:53:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 21:53:24] 
[2026-01-08 21:53:24] 2026-01-08 20:52:29,729 | INFO     | ***************************************
[2026-01-08 21:53:24] 2026-01-08 20:52:30,233 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-01-08 21:53:24] 2026-01-08 20:52:30,493 | INFO     | sufficient remaining disk space (496035168256 B)
[2026-01-08 21:53:24] 2026-01-08 20:52:30,494 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 21:53:24] 2026-01-08 20:52:30,494 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 21:53:24] 2026-01-08 20:52:30,494 | INFO     | update_server=False
[2026-01-08 21:53:24] 2026-01-08 20:52:30,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 21:53:24] 2026-01-08 20:52:30,497 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:53:24] 2026-01-08 20:52:30,497 | INFO     | aborting loop
[2026-01-08 21:53:24] 2026-01-08 20:52:30,579 | INFO     | all payload control threads have been joined
[2026-01-08 21:53:24] 2026-01-08 20:52:30,808 | INFO     | all job control threads have been joined
[2026-01-08 21:53:24] 2026-01-08 20:52:31,414 | INFO     | all data control threads have been joined
[2026-01-08 21:53:24] 2026-01-08 20:52:31,500 | INFO     | [job] retrieve thread has finished
[2026-01-08 21:53:24] 2026-01-08 20:52:31,503 | INFO     | [job] job monitor thread has finished
[2026-01-08 21:53:24] 2026-01-08 20:52:31,585 | INFO     | [payload] control thread has finished
[2026-01-08 21:53:24] 2026-01-08 20:52:31,616 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 21:53:24] 2026-01-08 20:52:31,702 | INFO     | [job] validate thread has finished
[2026-01-08 21:53:24] 2026-01-08 20:52:31,723 | INFO     | [data] copytool_in thread has finished
[2026-01-08 21:53:24] 2026-01-08 20:52:31,771 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:53:24] 2026-01-08 20:52:31,815 | INFO     | [job] control thread has finished
[2026-01-08 21:53:24] 2026-01-08 20:52:31,848 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 21:53:24] 2026-01-08 20:52:31,921 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 21:53:24] 2026-01-08 20:52:32,334 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 21:53:24] 2026-01-08 20:52:32,421 | INFO     | [data] control thread has finished
[2026-01-08 21:53:24] 2026-01-08 20:52:32,777 | INFO     | [job] queue monitor thread has finished
[2026-01-08 21:53:24] 2026-01-08 20:52:32,827 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 21:53:24] 2026-01-08 20:52:32,932 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 21:53:24] 2026-01-08 20:52:33,009 | INFO     | [payload] failed_post thread has finished
[2026-01-08 21:53:24] 2026-01-08 20:52:33,093 | INFO     | [payload] validate_post thread has finished
[2026-01-08 21:53:24] 2026-01-08 20:52:33,857 | INFO     | [data] copytool_out thread has finished
[2026-01-08 21:53:24] 2026-01-08 20:52:35,625 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 21:53:24] 2026-01-08 20:53:00,349 | INFO     | PID=20553 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 21:53:24] 2026-01-08 20:53:00,349 | INFO     | .. there are 2 such processes running
[2026-01-08 21:53:24] 2026-01-08 20:53:00,349 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 21:53:24] 2026-01-08 20:53:00,350 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 21:53:24] 2026-01-08 20:53:00,350 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 21:53:24] 2026-01-08 20:53:13,574 | INFO     | [monitor] cgroup control has ended
[2026-01-08 21:53:24] 2026-01-08 20:53:13,698 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140263601637184)>', '<ExcThread(monitor, started 140263028684544)>']
[2026-01-08 21:53:24] 2026-01-08 20:53:14,433 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 21:53:24] 2026-01-08 20:53:14,434 | INFO     | [monitor] control thread has ended
[2026-01-08 21:53:24] 2026-01-08 20:53:18,724 | INFO     | all workflow threads have been joined
[2026-01-08 21:53:24] 2026-01-08 20:53:18,724 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 21:53:24] 2026-01-08 20:53:18,724 | INFO     | traces error code: 0
[2026-01-08 21:53:24] 2026-01-08 20:53:18,724 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 21:53:24] 2026-01-08 20:53:19,026 [wrapper] ==== pilot stdout END ====
[2026-01-08 21:53:24] 2026-01-08 20:53:19,233 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 21:53:24] 2026-01-08 20:53:19,330 [wrapper] pilotpid: 20553
[2026-01-08 21:53:24] 2026-01-08 20:53:19,415 [wrapper] Pilot exit status: 0
[2026-01-08 21:53:24] 2026-01-08 20:53:19,883 [wrapper] pandaids: 6962915923
[2026-01-08 21:53:24] 2026-01-08 20:53:20,738 [wrapper] cleanup supervisor_pilot 24946 20554
[2026-01-08 21:53:24] 2026-01-08 20:53:20,852 [wrapper] Test setup, not cleaning
[2026-01-08 21:53:24] 2026-01-08 20:53:20,973 [wrapper] apfmon messages muted
[2026-01-08 21:53:24] 2026-01-08 20:53:21,073 [wrapper] ==== wrapper stdout END ====
[2026-01-08 21:53:24] 2026-01-08 20:53:21,182 [wrapper] ==== wrapper stderr END ====
[2026-01-08 21:53:24]  *** Error codes and diagnostics ***
[2026-01-08 21:53:24]     "exeErrorCode": 0,
[2026-01-08 21:53:24]     "exeErrorDiag": "",
[2026-01-08 21:53:24]     "pilotErrorCode": 0,
[2026-01-08 21:53:24]     "pilotErrorDiag": "",
[2026-01-08 21:53:24]  *** Listing of results directory ***
[2026-01-08 21:53:24] total 442296
[2026-01-08 21:53:24] -rw-r--r--. 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-08 21:53:24] -rwx------. 1 boinc boinc     36322 Jan  8 09:01 runpilot2-wrapper.sh
[2026-01-08 21:53:24] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:04 queuedata.json
[2026-01-08 21:53:24] -rw-r--r--. 1 boinc boinc       100 Jan  8 16:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 21:53:24] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 16:11 run_atlas
[2026-01-08 21:53:24] -rw-r--r--. 1 boinc boinc       105 Jan  8 16:11 job.xml
[2026-01-08 21:53:24] -rw-r--r--. 1 boinc boinc      6391 Jan  8 16:11 init_data.xml
[2026-01-08 21:53:24] -rw-r--r--. 2 boinc boinc 225675321 Jan  8 16:11 EVNT.47898824._000438.pool.root.1
[2026-01-08 21:53:24] -rw-r--r--. 2 boinc boinc     15847 Jan  8 16:11 start_atlas.sh
[2026-01-08 21:53:24] drwxrwx--x. 2 boinc boinc        68 Jan  8 16:11 shared
[2026-01-08 21:53:24] -rw-r--r--. 2 boinc boinc    592393 Jan  8 16:11 input.tar.gz
[2026-01-08 21:53:24] -rw-r--r--. 1 boinc boinc         0 Jan  8 16:11 boinc_lockfile
[2026-01-08 21:53:24] -rw-r--r--. 1 boinc boinc      2518 Jan  8 16:12 pandaJob.out
[2026-01-08 21:53:24] -rw-------. 1 boinc boinc    989843 Jan  8 16:16 agis_schedconf.cvmfs.json
[2026-01-08 21:53:24] drwx------. 5 boinc boinc      4096 Jan  8 16:16 pilot3
[2026-01-08 21:53:24] -rw-------. 1 boinc boinc 216922818 Jan  8 21:49 HITS.47898826._018511.pool.root.1
[2026-01-08 21:53:24] -rw-r--r--. 1 boinc boinc       531 Jan  8 21:49 boinc_task_state.xml
[2026-01-08 21:53:24] -rw-------. 1 boinc boinc      1012 Jan  8 21:50 memory_monitor_summary.json
[2026-01-08 21:53:24] -rw-------. 1 boinc boinc   1516240 Jan  8 21:50 agis_ddmendpoints.agis.ALL.json
[2026-01-08 21:53:24] -rw-------. 1 boinc boinc    529789 Jan  8 21:50 log.47898826._018511.job.log.tgz.1
[2026-01-08 21:53:24] -rw-------. 1 boinc boinc        95 Jan  8 21:52 pilot_heartbeat.json
[2026-01-08 21:53:24] -rw-------. 1 boinc boinc      7778 Jan  8 21:52 heartbeat.json
[2026-01-08 21:53:24] -rw-------. 1 boinc boinc      4885 Jan  8 21:53 pilotlog.txt
[2026-01-08 21:53:24] -rw-------. 1 boinc boinc   2677756 Jan  8 21:53 log.47898826._018511.job.log.1
[2026-01-08 21:53:24] -rw-------. 1 boinc boinc       357 Jan  8 21:53 output.list
[2026-01-08 21:53:24] -rw-r--r--. 1 boinc boinc        28 Jan  8 21:53 wrapper_checkpoint.txt
[2026-01-08 21:53:24] -rw-r--r--. 1 boinc boinc      8192 Jan  8 21:53 boinc_mmap_file
[2026-01-08 21:53:24] -rw-r--r--. 1 boinc boinc       620 Jan  8 21:53 runtime_log
[2026-01-08 21:53:24] -rw-------. 1 boinc boinc   3225600 Jan  8 21:53 result.tar.gz
[2026-01-08 21:53:24] -rw-r--r--. 1 boinc boinc      8833 Jan  8 21:53 runtime_log.err
[2026-01-08 21:53:24] -rw-------. 1 boinc boinc       657 Jan  8 21:53 BscKDm78zx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTVjKDmly1p3m.diag
[2026-01-08 21:53:24] -rw-r--r--. 1 boinc boinc     20757 Jan  8 21:53 stderr.txt
[2026-01-08 21:53:24] HITS file was successfully produced:
[2026-01-08 21:53:24] -rw-------. 1 boinc boinc 216922818 Jan  8 21:49 shared/HITS.pool.root.1
[2026-01-08 21:53:24]  *** Contents of shared directory: ***
[2026-01-08 21:53:24] total 435976
[2026-01-08 21:53:24] -rw-r--r--. 2 boinc boinc 225675321 Jan  8 16:11 ATLAS.root_0
[2026-01-08 21:53:24] -rw-r--r--. 2 boinc boinc     15847 Jan  8 16:11 start_atlas.sh
[2026-01-08 21:53:24] -rw-r--r--. 2 boinc boinc    592393 Jan  8 16:11 input.tar.gz
[2026-01-08 21:53:24] -rw-------. 1 boinc boinc 216922818 Jan  8 21:49 HITS.pool.root.1
[2026-01-08 21:53:24] -rw-------. 1 boinc boinc   3225600 Jan  8 21:53 result.tar.gz
21:53:25 (16831): run_atlas exited; CPU time 73576.423148
21:53:25 (16831): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN