Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:56:59 (1797198): wrapper (7.7.26015): starting
06:56:59 (1797198): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 06:56:59] Arguments: --nthreads 8
[2026-01-08 06:56:59] Threads: 8
[2026-01-08 06:56:59] Checking for CVMFS
[2026-01-08 06:57:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 06:57:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 06:57:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 06:57:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 06:57:02] 2.13.3.0 11414 91892 177016 154906 0 699 22353857 25181184 32204 16776704 0 502629332 99.582 521084482 26319 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 06:57:02] CVMFS is ok
[2026-01-08 06:57:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 06:57:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 06:57:02] Further information can be found at the LHC@home message board.
[2026-01-08 06:57:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 06:57:02] Checking for apptainer binary...
[2026-01-08 06:57:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 06:57:02] Running /usr/bin/apptainer --version
[2026-01-08 06:57:02] apptainer version 1.4.5-2.el9
[2026-01-08 06:57:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 06:57:03] c-16-34.aglt2.org
[2026-01-08 06:57:03] apptainer works
[2026-01-08 06:57:03] Set ATHENA_PROC_NUMBER=8
[2026-01-08 06:57:03] Set ATHENA_CORE_NUMBER=8
[2026-01-08 06:57:03] Starting ATLAS job with PandaID=6962915927
[2026-01-08 06:57:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 19:58:48]  *** The last 200 lines of the pilot log: ***
[2026-01-08 19:58:48] 2026-01-09 00:57:49,659 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2782.0884583333336
[2026-01-08 19:58:48] 2026-01-09 00:57:49,724 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6962915927/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 19:58:48] 2026-01-09 00:57:49,724 | INFO     | extracted standard info from prmon json
[2026-01-08 19:58:48] 2026-01-09 00:57:49,725 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 19:58:48] 2026-01-09 00:57:49,728 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 19:58:48] 2026-01-09 00:57:49,732 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 19:58:48] 2026-01-09 00:57:49,732 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 19:58:48] 2026-01-09 00:57:49,753 | INFO     | fitting pss+swap vs Time
[2026-01-08 19:58:48] 2026-01-09 00:57:49,755 | INFO     | sum of square deviations: 137734243244.52652
[2026-01-08 19:58:48] 2026-01-09 00:57:50,023 | INFO     | sum of deviations: 313913900186.62616
[2026-01-08 19:58:48] 2026-01-09 00:57:50,023 | INFO     | mean x: 1767896930.832241
[2026-01-08 19:58:48] 2026-01-09 00:57:50,023 | INFO     | mean y: 2490354.5517693316
[2026-01-08 19:58:48] 2026-01-09 00:57:50,023 | INFO     | intersect: -4026772141.197043
[2026-01-08 19:58:48] 2026-01-09 00:57:50,024 | INFO     | chi2: 5.099190958650374
[2026-01-08 19:58:48] 2026-01-09 00:57:50,052 | INFO     | sum of square deviations: 135044330663.54059
[2026-01-08 19:58:48] 2026-01-09 00:57:50,175 | INFO     | sum of deviations: 412419081348.47784
[2026-01-08 19:58:48] 2026-01-09 00:57:50,175 | INFO     | mean x: 1767896778.337731
[2026-01-08 19:58:48] 2026-01-09 00:57:50,175 | INFO     | mean y: 2495916.556728232
[2026-01-08 19:58:48] 2026-01-09 00:57:50,176 | INFO     | intersect: -5396578310.835681
[2026-01-08 19:58:48] 2026-01-09 00:57:50,177 | INFO     | chi2: 3.593065165450239
[2026-01-08 19:58:48] 2026-01-09 00:57:50,177 | INFO     | current chi2=3.593065165450239 (change=29.536563847351356 %)
[2026-01-08 19:58:48] 2026-01-09 00:57:50,178 | INFO     | sum of square deviations: 132389628198.19406
[2026-01-08 19:58:48] 2026-01-09 00:57:50,198 | INFO     | sum of deviations: 408907096365.7174
[2026-01-08 19:58:48] 2026-01-09 00:57:50,199 | INFO     | mean x: 1767896625.8419654
[2026-01-08 19:58:48] 2026-01-09 00:57:50,199 | INFO     | mean y: 2495714.812749004
[2026-01-08 19:58:48] 2026-01-09 00:57:50,199 | INFO     | intersect: -5457943186.530494
[2026-01-08 19:58:48] 2026-01-09 00:57:50,200 | INFO     | chi2: 3.59318033800416
[2026-01-08 19:58:48] 2026-01-09 00:57:50,200 | INFO     | current chi2=3.59318033800416 (change=-0.0032054123323027703 %)
[2026-01-08 19:58:48] 2026-01-09 00:57:50,200 | INFO     | right removable region: 752
[2026-01-08 19:58:48] 2026-01-09 00:57:50,201 | INFO     | sum of square deviations: 135043989613.21509
[2026-01-08 19:58:48] 2026-01-09 00:57:50,221 | INFO     | sum of deviations: 96042554637.2745
[2026-01-08 19:58:48] 2026-01-09 00:57:50,221 | INFO     | mean x: 1767897083.3364117
[2026-01-08 19:58:48] 2026-01-09 00:57:50,222 | INFO     | mean y: 2502694.4538258575
[2026-01-08 19:58:48] 2026-01-09 00:57:50,222 | INFO     | intersect: -1254816144.4350986
[2026-01-08 19:58:48] 2026-01-09 00:57:50,223 | INFO     | chi2: 2.089477965586303
[2026-01-08 19:58:48] 2026-01-09 00:57:50,223 | INFO     | current chi2=2.089477965586303 (change=59.02334345722689 %)
[2026-01-08 19:58:48] 2026-01-09 00:57:50,224 | INFO     | sum of square deviations: 132389084688.23383
[2026-01-08 19:58:48] 2026-01-09 00:57:50,289 | INFO     | sum of deviations: 19655513615.5963
[2026-01-08 19:58:48] 2026-01-09 00:57:50,290 | INFO     | mean x: 1767897235.8379815
[2026-01-08 19:58:48] 2026-01-09 00:57:50,290 | INFO     | mean y: 2507077.7343957503
[2026-01-08 19:58:48] 2026-01-09 00:57:50,290 | INFO     | intersect: -259968701.68367013
[2026-01-08 19:58:48] 2026-01-09 00:57:50,291 | INFO     | chi2: 1.7129719504472933
[2026-01-08 19:58:48] 2026-01-09 00:57:50,291 | INFO     | current chi2=1.7129719504472933 (change=18.01914264424238 %)
[2026-01-08 19:58:48] 2026-01-09 00:57:50,292 | INFO     | left removable region: 20
[2026-01-08 19:58:48] 2026-01-09 00:57:50,293 | INFO     | sum of square deviations: 121618596861.93832
[2026-01-08 19:58:48] 2026-01-09 00:57:50,317 | INFO     | sum of deviations: 66569333004.6803
[2026-01-08 19:58:48] 2026-01-09 00:57:50,317 | INFO     | mean x: 1767897205.3565574
[2026-01-08 19:58:48] 2026-01-09 00:57:50,318 | INFO     | mean y: 2515746.9207650274
[2026-01-08 19:58:48] 2026-01-09 00:57:50,318 | INFO     | intersect: -965163052.3587867
[2026-01-08 19:58:48] 2026-01-09 00:57:50,319 | INFO     | chi2: 0.09371055780037224
[2026-01-08 19:58:48] 2026-01-09 00:57:50,319 | INFO     | current memory leak: 0.55 B/s (using 732 data points, chi2=0.09)
[2026-01-08 19:58:48] 2026-01-09 00:57:50,320 | INFO     | could have reported an average CPU frequency of 2762 MHz (29 samples)
[2026-01-08 19:58:48] 2026-01-09 00:57:50,320 | INFO     | ..............................
[2026-01-08 19:58:48] 2026-01-09 00:57:50,321 | INFO     | . Timing measurements:
[2026-01-08 19:58:48] 2026-01-09 00:57:50,321 | INFO     | . get job = 0 s
[2026-01-08 19:58:48] 2026-01-09 00:57:50,321 | INFO     | . initial setup = 6 s
[2026-01-08 19:58:48] 2026-01-09 00:57:50,322 | INFO     | . payload setup = 55 s
[2026-01-08 19:58:48] 2026-01-09 00:57:50,322 | INFO     | . stage-in = 0 s
[2026-01-08 19:58:48] 2026-01-09 00:57:50,322 | INFO     | . payload execution = 46578 s
[2026-01-08 19:58:48] 2026-01-09 00:57:50,322 | INFO     | . stage-out = 5 s
[2026-01-08 19:58:48] 2026-01-09 00:57:50,322 | INFO     | . log creation = 0 s
[2026-01-08 19:58:48] 2026-01-09 00:57:50,322 | INFO     | ..............................
[2026-01-08 19:58:48] 2026-01-09 00:57:50,572 | INFO     | 
[2026-01-08 19:58:48] 2026-01-09 00:57:50,573 | INFO     | job summary report
[2026-01-08 19:58:48] 2026-01-09 00:57:50,573 | INFO     | --------------------------------------------------
[2026-01-08 19:58:48] 2026-01-09 00:57:50,573 | INFO     | PanDA job id: 6962915927
[2026-01-08 19:58:48] 2026-01-09 00:57:50,573 | INFO     | task id: 47898826
[2026-01-08 19:58:48] 2026-01-09 00:57:50,573 | INFO     | errors: (none)
[2026-01-08 19:58:48] 2026-01-09 00:57:50,573 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 19:58:48] 2026-01-09 00:57:50,573 | INFO     | pilot state: finished 
[2026-01-08 19:58:48] 2026-01-09 00:57:50,573 | INFO     | transexitcode: 0
[2026-01-08 19:58:48] 2026-01-09 00:57:50,574 | INFO     | exeerrorcode: 0
[2026-01-08 19:58:48] 2026-01-09 00:57:50,574 | INFO     | exeerrordiag: 
[2026-01-08 19:58:48] 2026-01-09 00:57:50,574 | INFO     | exitcode: 0
[2026-01-08 19:58:48] 2026-01-09 00:57:50,574 | INFO     | exitmsg: OK
[2026-01-08 19:58:48] 2026-01-09 00:57:50,574 | INFO     | cpuconsumptiontime: 80700 s
[2026-01-08 19:58:48] 2026-01-09 00:57:50,574 | INFO     | nevents: 400
[2026-01-08 19:58:48] 2026-01-09 00:57:50,574 | INFO     | neventsw: 0
[2026-01-08 19:58:48] 2026-01-09 00:57:50,574 | INFO     | pid: 1834570
[2026-01-08 19:58:48] 2026-01-09 00:57:50,574 | INFO     | pgrp: 1834570
[2026-01-08 19:58:48] 2026-01-09 00:57:50,575 | INFO     | corecount: 8
[2026-01-08 19:58:48] 2026-01-09 00:57:50,575 | INFO     | event service: False
[2026-01-08 19:58:48] 2026-01-09 00:57:50,575 | INFO     | sizes: {0: 2283741, 1: 2283797, 2: 2284024, 13: 2284024, 24: 2284080, 35: 2284108, 43: 2284526, 46: 2284554, 46638: 2329476, 46639: 2329475, 46645: 2338529, 46650:
[2026-01-08 19:58:48] 2026-01-09 00:57:50,575 | INFO     | --------------------------------------------------
[2026-01-08 19:58:48] 2026-01-09 00:57:50,575 | INFO     | 
[2026-01-08 19:58:48] 2026-01-09 00:57:50,575 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-08 19:58:48] 2026-01-09 00:57:50,748 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 19:58:48] 2026-01-09 00:57:50,749 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 19:58:48] 2026-01-09 00:57:50,749 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 19:58:48] 2026-01-09 00:57:50,749 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 19:58:48] 2026-01-09 00:57:50,749 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 19:58:48] 2026-01-09 00:57:50,749 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 19:58:48] 2026-01-09 00:57:50,749 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 19:58:48] 2026-01-09 00:57:50,749 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 19:58:48] 2026-01-09 00:57:50,750 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 19:58:48] 2026-01-09 00:57:50,750 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 19:58:48] 2026-01-09 00:57:50,750 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 19:58:48] 2026-01-09 00:57:50,750 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 19:58:48] 2026-01-09 00:57:50,750 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 19:58:48] 2026-01-09 00:57:50,750 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 19:58:48] 2026-01-09 00:57:50,750 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 19:58:48] 2026-01-09 00:57:50,751 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 19:58:48] 2026-01-09 00:57:50,751 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 19:58:48] 2026-01-09 00:57:50,751 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 19:58:48] 2026-01-09 00:57:50,751 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 19:58:48] 2026-01-09 00:57:50,751 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 19:58:48] 2026-01-09 00:57:50,751 | INFO     | job 6962915927 has completed (purged errors)
[2026-01-08 19:58:48] 2026-01-09 00:57:50,751 | INFO     | overall cleanup function is called
[2026-01-08 19:58:48] 2026-01-09 00:57:51,398 | INFO     | PID=1812167 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 19:58:48] 2026-01-09 00:57:51,403 | INFO     | .. there are 42 such processes running
[2026-01-08 19:58:48] 2026-01-09 00:57:51,835 | INFO     | --- collectZombieJob: --- 10, [1834570]
[2026-01-08 19:58:48] 2026-01-09 00:57:51,835 | INFO     | zombie collector waiting for pid 1834570
[2026-01-08 19:58:48] 2026-01-09 00:57:51,835 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 19:58:48] 2026-01-09 00:57:51,835 | INFO     | collected zombie processes
[2026-01-08 19:58:48] 2026-01-09 00:57:51,836 | INFO     | will attempt to kill all subprocesses of pid=1834570
[2026-01-08 19:58:48] 2026-01-09 00:57:54,338 | INFO     | process IDs to be killed: [1834570] (in reverse order)
[2026-01-08 19:58:48] 2026-01-09 00:57:54,855 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 19:58:48] 2026-01-09 00:57:54,855 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 19:58:48] 2026-01-09 00:57:54,873 | INFO     | did not find any defunct processes belonging to 1834570
[2026-01-08 19:58:48] 2026-01-09 00:57:54,891 | INFO     | did not find any defunct processes belonging to 1834570
[2026-01-08 19:58:48] 2026-01-09 00:57:54,892 | INFO     | ready for new job
[2026-01-08 19:58:48] 2026-01-09 00:57:54,892 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 19:58:48] 2026-01-09 00:57:54,896 | INFO     | ***************************************
[2026-01-08 19:58:48] 2026-01-09 00:57:54,896 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 19:58:48] 2026-01-09 00:57:54,896 | INFO     | ***************************************
[2026-01-08 19:58:48] 2026-01-09 00:57:54,896 | INFO     | 
[2026-01-08 19:58:48] 2026-01-09 00:57:54,899 | INFO     | architecture information:
[2026-01-08 19:58:48] 2026-01-09 00:57:54,900 | INFO     | executing command: cat /etc/os-release
[2026-01-08 19:58:48] 2026-01-09 00:57:54,920 | INFO     | cat /etc/os-release:
[2026-01-08 19:58:48] NAME="CentOS Linux"
[2026-01-08 19:58:48] VERSION="7 (Core)"
[2026-01-08 19:58:48] ID="centos"
[2026-01-08 19:58:48] ID_LIKE="rhel fedora"
[2026-01-08 19:58:48] VERSION_ID="7"
[2026-01-08 19:58:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 19:58:48] ANSI_COLOR="0;31"
[2026-01-08 19:58:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 19:58:48] HOME_URL="https://www.centos.org/"
[2026-01-08 19:58:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 19:58:48] 
[2026-01-08 19:58:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 19:58:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 19:58:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 19:58:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 19:58:48] 
[2026-01-08 19:58:48] 2026-01-09 00:57:54,921 | INFO     | ***************************************
[2026-01-08 19:58:48] 2026-01-09 00:57:55,424 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-08 19:58:48] 2026-01-09 00:57:55,551 | INFO     | sufficient remaining disk space (63591940096 B)
[2026-01-08 19:58:48] 2026-01-09 00:57:55,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 19:58:48] 2026-01-09 00:57:55,552 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 19:58:48] 2026-01-09 00:57:55,552 | INFO     | update_server=False
[2026-01-08 19:58:48] 2026-01-09 00:57:55,552 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 19:58:48] 2026-01-09 00:57:55,552 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 19:58:48] 2026-01-09 00:57:55,553 | INFO     | aborting loop
[2026-01-08 19:58:48] 2026-01-09 00:57:55,580 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 19:58:48] 2026-01-09 00:57:55,610 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 19:58:48] 2026-01-09 00:57:55,721 | INFO     | all payload control threads have been joined
[2026-01-08 19:58:48] 2026-01-09 00:57:56,009 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 19:58:48] 2026-01-09 00:57:56,014 | INFO     | all data control threads have been joined
[2026-01-08 19:58:48] 2026-01-09 00:57:56,362 | INFO     | all job control threads have been joined
[2026-01-08 19:58:48] 2026-01-09 00:57:56,558 | INFO     | [job] retrieve thread has finished
[2026-01-08 19:58:48] 2026-01-09 00:57:56,564 | INFO     | [job] job monitor thread has finished
[2026-01-08 19:58:48] 2026-01-09 00:57:56,616 | INFO     | [job] queue monitor thread has finished
[2026-01-08 19:58:48] 2026-01-09 00:57:56,653 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 19:58:48] 2026-01-09 00:57:56,727 | INFO     | [payload] control thread has finished
[2026-01-08 19:58:48] 2026-01-09 00:57:57,034 | INFO     | [data] control thread has finished
[2026-01-08 19:58:48] 2026-01-09 00:57:57,116 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 19:58:48] 2026-01-09 00:57:57,117 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 19:58:48] 2026-01-09 00:57:57,368 | INFO     | [job] control thread has finished
[2026-01-08 19:58:48] 2026-01-09 00:57:57,771 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 19:58:48] 2026-01-09 00:57:57,804 | INFO     | [job] validate thread has finished
[2026-01-08 19:58:48] 2026-01-09 00:57:58,004 | INFO     | [payload] failed_post thread has finished
[2026-01-08 19:58:48] 2026-01-09 00:57:58,016 | INFO     | [data] copytool_out thread has finished
[2026-01-08 19:58:48] 2026-01-09 00:57:58,017 | INFO     | [data] copytool_in thread has finished
[2026-01-08 19:58:48] 2026-01-09 00:57:58,056 | INFO     | [payload] validate_post thread has finished
[2026-01-08 19:58:48] 2026-01-09 00:57:59,595 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 19:58:48] 2026-01-09 00:58:01,268 | INFO     | [monitor] cgroup control has ended
[2026-01-08 19:58:48] 2026-01-09 00:58:01,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140046615611200)>', '<ExcThread(monitor, started 140045973440256)>']
[2026-01-08 19:58:48] 2026-01-09 00:58:07,055 | INFO     | all workflow threads have been joined
[2026-01-08 19:58:48] 2026-01-09 00:58:07,092 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 19:58:48] 2026-01-09 00:58:07,092 | INFO     | traces error code: 0
[2026-01-08 19:58:48] 2026-01-09 00:58:07,093 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 19:58:48] 2026-01-09 00:58:26,408 | INFO     | PID=1812167 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 19:58:48] 2026-01-09 00:58:26,409 | INFO     | .. there are 41 such processes running
[2026-01-08 19:58:48] 2026-01-09 00:58:26,409 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 19:58:48] 2026-01-09 00:58:26,409 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 19:58:48] 2026-01-09 00:58:26,409 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 19:58:48] 2026-01-09 00:58:26,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 19:58:48] 2026-01-09 00:58:26,410 | CRITICAL | thread 'MainThread' is not alive
[2026-01-08 19:58:48] 2026-01-09 00:58:26,434 | INFO     | [monitor] control thread has ended
[2026-01-08 19:58:48] 2026-01-09 00:58:27,182 [wrapper] ==== pilot stdout END ====
[2026-01-08 19:58:48] 2026-01-09 00:58:27,198 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 19:58:48] 2026-01-09 00:58:27,235 [wrapper] pilotpid: 1812167
[2026-01-08 19:58:48] 2026-01-09 00:58:27,250 [wrapper] Pilot exit status: 0
[2026-01-08 19:58:48] 2026-01-09 00:58:27,321 [wrapper] pandaids: 6962915927
[2026-01-08 19:58:48] 2026-01-09 00:58:27,528 [wrapper] cleanup supervisor_pilot 1752700 1812168
[2026-01-08 19:58:48] 2026-01-09 00:58:27,571 [wrapper] Test setup, not cleaning
[2026-01-08 19:58:48] 2026-01-09 00:58:27,619 [wrapper] apfmon messages muted
[2026-01-08 19:58:48] 2026-01-09 00:58:27,659 [wrapper] ==== wrapper stdout END ====
[2026-01-08 19:58:48] 2026-01-09 00:58:27,684 [wrapper] ==== wrapper stderr END ====
[2026-01-08 19:58:48]  *** Error codes and diagnostics ***
[2026-01-08 19:58:48]     "exeErrorCode": 0,
[2026-01-08 19:58:48]     "exeErrorDiag": "",
[2026-01-08 19:58:48]     "pilotErrorCode": 0,
[2026-01-08 19:58:48]     "pilotErrorDiag": "",
[2026-01-08 19:58:48]  *** Listing of results directory ***
[2026-01-08 19:58:48] total 452884
[2026-01-08 19:58:48] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-08 19:58:48] -rwx------. 1 boincer umatlas     36322 Jan  8 03:01 runpilot2-wrapper.sh
[2026-01-08 19:58:48] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:04 queuedata.json
[2026-01-08 19:58:48] -rw-r--r--. 1 boincer umatlas       100 Jan  8 06:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 19:58:48] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 06:56 run_atlas
[2026-01-08 19:58:48] -rw-r--r--. 1 boincer umatlas       105 Jan  8 06:56 job.xml
[2026-01-08 19:58:48] -rw-r--r--. 2 boincer umatlas 225675321 Jan  8 06:56 EVNT.47898824._000438.pool.root.1
[2026-01-08 19:58:48] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 06:56 start_atlas.sh
[2026-01-08 19:58:48] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 06:56 shared
[2026-01-08 19:58:48] -rw-r--r--. 2 boincer umatlas    592395 Jan  8 06:56 input.tar.gz
[2026-01-08 19:58:48] -rw-r--r--. 1 boincer umatlas         0 Jan  8 06:56 boinc_lockfile
[2026-01-08 19:58:48] -rw-r--r--. 1 boincer umatlas      2518 Jan  8 06:57 pandaJob.out
[2026-01-08 19:58:48] -rw-------. 1 boincer umatlas        57 Jan  8 06:57 setup.sh.local
[2026-01-08 19:58:48] -rw-------. 1 boincer umatlas    989835 Jan  8 06:58 agis_schedconf.cvmfs.json
[2026-01-08 19:58:48] drwx------. 5 boincer umatlas      4096 Jan  8 06:58 pilot3
[2026-01-08 19:58:48] -rw-------. 1 boincer umatlas 221750189 Jan  8 19:54 HITS.47898826._018515.pool.root.1
[2026-01-08 19:58:48] -rw-r--r--. 1 boincer umatlas       531 Jan  8 19:54 boinc_task_state.xml
[2026-01-08 19:58:48] -rw-------. 1 boincer umatlas      1056 Jan  8 19:57 memory_monitor_summary.json
[2026-01-08 19:58:48] -rw-------. 1 boincer umatlas   1516240 Jan  8 19:57 agis_ddmendpoints.agis.ALL.json
[2026-01-08 19:58:48] -rw-------. 1 boincer umatlas    848222 Jan  8 19:57 log.47898826._018515.job.log.tgz.1
[2026-01-08 19:58:48] -rw-------. 1 boincer umatlas        95 Jan  8 19:57 pilot_heartbeat.json
[2026-01-08 19:58:48] -rw-------. 1 boincer umatlas      7846 Jan  8 19:57 heartbeat.json
[2026-01-08 19:58:48] -rw-r--r--. 1 boincer umatlas      6612 Jan  8 19:58 init_data.xml
[2026-01-08 19:58:48] -rw-------. 1 boincer umatlas       893 Jan  8 19:58 pilotlog.txt
[2026-01-08 19:58:48] -rw-------. 1 boincer umatlas   5360765 Jan  8 19:58 log.47898826._018515.job.log.1
[2026-01-08 19:58:48] -rw-------. 1 boincer umatlas       357 Jan  8 19:58 output.list
[2026-01-08 19:58:48] -rw-r--r--. 1 boincer umatlas       620 Jan  8 19:58 runtime_log
[2026-01-08 19:58:48] -rw-------. 1 boincer umatlas   6225920 Jan  8 19:58 result.tar.gz
[2026-01-08 19:58:48] -rw-r--r--. 1 boincer umatlas      9338 Jan  8 19:58 runtime_log.err
[2026-01-08 19:58:48] -rw-------. 1 boincer umatlas       662 Jan  8 19:58 8AfKDm78zx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVVjKDm5b9Q6n.diag
[2026-01-08 19:58:48] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 19:58 boinc_mmap_file
[2026-01-08 19:58:48] -rw-r--r--. 1 boincer umatlas        28 Jan  8 19:58 wrapper_checkpoint.txt
[2026-01-08 19:58:48] -rw-r--r--. 1 boincer umatlas     21303 Jan  8 19:58 stderr.txt
[2026-01-08 19:58:48] HITS file was successfully produced:
[2026-01-08 19:58:48] -rw-------. 1 boincer umatlas 221750189 Jan  8 19:54 shared/HITS.pool.root.1
[2026-01-08 19:58:48]  *** Contents of shared directory: ***
[2026-01-08 19:58:48] total 443624
[2026-01-08 19:58:48] -rw-r--r--. 2 boincer umatlas 225675321 Jan  8 06:56 ATLAS.root_0
[2026-01-08 19:58:48] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 06:56 start_atlas.sh
[2026-01-08 19:58:48] -rw-r--r--. 2 boincer umatlas    592395 Jan  8 06:56 input.tar.gz
[2026-01-08 19:58:48] -rw-------. 1 boincer umatlas 221750189 Jan  8 19:54 HITS.pool.root.1
[2026-01-08 19:58:48] -rw-------. 1 boincer umatlas   6225920 Jan  8 19:58 result.tar.gz
19:58:50 (1797198): run_atlas exited; CPU time 82957.993219
19:58:50 (1797198): called boinc_finish(0)

</stderr_txt>
]]>

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