Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:49:02 (2876382): wrapper (7.7.26015): starting
03:49:02 (2876382): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 03:49:02] Arguments: --nthreads 8
[2026-01-08 03:49:02] Threads: 8
[2026-01-08 03:49:02] Checking for CVMFS
[2026-01-08 03:49:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 03:49:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 03:49:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 03:49:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 03:49:04] 2.13.3.0 290515 94509 570248 154897 0 370 29279819 40960000 12749 16776704 0 300192213 99.610 312077412 39335 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 03:49:04] CVMFS is ok
[2026-01-08 03:49:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 03:49:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 03:49:04] Further information can be found at the LHC@home message board.
[2026-01-08 03:49:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 03:49:04] Checking for apptainer binary...
[2026-01-08 03:49:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 03:49:04] Running /usr/bin/apptainer --version
[2026-01-08 03:49:05] apptainer version 1.4.5-2.el9
[2026-01-08 03:49:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 03:49:05] c6-5-37-4.aglt2.org
[2026-01-08 03:49:05] apptainer works
[2026-01-08 03:49:05] Set ATHENA_PROC_NUMBER=8
[2026-01-08 03:49:05] Set ATHENA_CORE_NUMBER=8
[2026-01-08 03:49:05] Starting ATLAS job with PandaID=6962915993
[2026-01-08 03:49:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 13:00:47]  *** The last 200 lines of the pilot log: ***
[2026-01-08 13:00:48] 2026-01-08 17:21:42,416 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3072.095125000001
[2026-01-08 13:00:48] 2026-01-08 17:21:42,434 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962915993/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 13:00:48] 2026-01-08 17:21:42,438 | INFO     | extracted standard info from prmon json
[2026-01-08 13:00:48] 2026-01-08 17:21:42,439 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 13:00:48] 2026-01-08 17:21:42,439 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 13:00:48] 2026-01-08 17:21:42,439 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 13:00:48] 2026-01-08 17:21:42,439 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 13:00:48] 2026-01-08 17:21:42,455 | INFO     | fitting pss+swap vs Time
[2026-01-08 13:00:48] 2026-01-08 17:21:42,457 | INFO     | sum of square deviations: 38759914157.328064
[2026-01-08 13:00:48] 2026-01-08 17:21:42,498 | INFO     | sum of deviations: 113681946288.0881
[2026-01-08 13:00:48] 2026-01-08 17:21:42,498 | INFO     | mean x: 1767877606.688
[2026-01-08 13:00:48] 2026-01-08 17:21:42,498 | INFO     | mean y: 2493686.148
[2026-01-08 13:00:48] 2026-01-08 17:21:42,498 | INFO     | intersect: -5182651108.333488
[2026-01-08 13:00:48] 2026-01-08 17:21:42,499 | INFO     | chi2: 6.5177476736464435
[2026-01-08 13:00:48] 2026-01-08 17:21:42,500 | INFO     | sum of square deviations: 37608721242.14955
[2026-01-08 13:00:48] 2026-01-08 17:21:42,535 | INFO     | sum of deviations: 241075267027.54108
[2026-01-08 13:00:48] 2026-01-08 17:21:42,535 | INFO     | mean x: 1767877454.189899
[2026-01-08 13:00:48] 2026-01-08 17:21:42,535 | INFO     | mean y: 2510529.2282828283
[2026-01-08 13:00:48] 2026-01-08 17:21:42,535 | INFO     | intersect: -11329742077.732203
[2026-01-08 13:00:48] 2026-01-08 17:21:42,536 | INFO     | chi2: 3.670500225853383
[2026-01-08 13:00:48] 2026-01-08 17:21:42,536 | INFO     | current chi2=3.670500225853383 (change=43.68453015303872 %)
[2026-01-08 13:00:48] 2026-01-08 17:21:42,537 | INFO     | sum of square deviations: 36480552014.46734
[2026-01-08 13:00:48] 2026-01-08 17:21:42,562 | INFO     | sum of deviations: 238683598114.87564
[2026-01-08 13:00:48] 2026-01-08 17:21:42,585 | INFO     | mean x: 1767877301.6918368
[2026-01-08 13:00:48] 2026-01-08 17:21:42,585 | INFO     | mean y: 2510205.793877551
[2026-01-08 13:00:48] 2026-01-08 17:21:42,586 | INFO     | intersect: -11564291613.051527
[2026-01-08 13:00:48] 2026-01-08 17:21:42,587 | INFO     | chi2: 3.6706078291260784
[2026-01-08 13:00:48] 2026-01-08 17:21:42,587 | INFO     | current chi2=3.6706078291260784 (change=-0.0029315697064204345 %)
[2026-01-08 13:00:48] 2026-01-08 17:21:42,587 | INFO     | right removable region: 489
[2026-01-08 13:00:48] 2026-01-08 17:21:42,588 | INFO     | sum of square deviations: 37608663902.14955
[2026-01-08 13:00:48] 2026-01-08 17:21:42,604 | INFO     | sum of deviations: -30702261403.309124
[2026-01-08 13:00:48] 2026-01-08 17:21:42,604 | INFO     | mean x: 1767877759.189899
[2026-01-08 13:00:48] 2026-01-08 17:21:42,621 | INFO     | mean y: 2512792.418181818
[2026-01-08 13:00:48] 2026-01-08 17:21:42,622 | INFO     | intersect: 1445739949.6754854
[2026-01-08 13:00:48] 2026-01-08 17:21:42,622 | INFO     | chi2: 3.5005557710193655
[2026-01-08 13:00:48] 2026-01-08 17:21:42,623 | INFO     | current chi2=3.5005557710193655 (change=46.29194092349802 %)
[2026-01-08 13:00:48] 2026-01-08 17:21:42,623 | INFO     | sum of square deviations: 36480437334.46735
[2026-01-08 13:00:48] 2026-01-08 17:21:42,640 | INFO     | sum of deviations: -84947989247.01224
[2026-01-08 13:00:48] 2026-01-08 17:21:42,640 | INFO     | mean x: 1767877911.6918368
[2026-01-08 13:00:48] 2026-01-08 17:21:42,640 | INFO     | mean y: 2520103.9469387755
[2026-01-08 13:00:48] 2026-01-08 17:21:42,640 | INFO     | intersect: 4119183302.239744
[2026-01-08 13:00:48] 2026-01-08 17:21:42,641 | INFO     | chi2: 2.9702411268730824
[2026-01-08 13:00:48] 2026-01-08 17:21:42,641 | INFO     | current chi2=2.9702411268730824 (change=15.149441369758692 %)
[2026-01-08 13:00:48] 2026-01-08 17:21:42,641 | INFO     | left removable region: 20
[2026-01-08 13:00:48] 2026-01-08 17:21:42,661 | INFO     | sum of square deviations: 31988240531.953117
[2026-01-08 13:00:48] 2026-01-08 17:21:42,680 | INFO     | sum of deviations: 35363311417.362495
[2026-01-08 13:00:48] 2026-01-08 17:21:42,681 | INFO     | mean x: 1767877881.196162
[2026-01-08 13:00:48] 2026-01-08 17:21:42,681 | INFO     | mean y: 2538351.7569296374
[2026-01-08 13:00:48] 2026-01-08 17:21:42,681 | INFO     | intersect: -1951867861.931425
[2026-01-08 13:00:48] 2026-01-08 17:21:42,681 | INFO     | chi2: 0.015395137388927027
[2026-01-08 13:00:48] 2026-01-08 17:21:42,682 | INFO     | current memory leak: 1.11 B/s (using 469 data points, chi2=0.02)
[2026-01-08 13:00:48] 2026-01-08 17:21:42,683 | INFO     | could have reported an average CPU frequency of 2937 MHz (20 samples)
[2026-01-08 13:00:48] 2026-01-08 17:21:42,701 | INFO     | ..............................
[2026-01-08 13:00:48] 2026-01-08 17:21:42,701 | INFO     | . Timing measurements:
[2026-01-08 13:00:48] 2026-01-08 17:21:42,701 | INFO     | . get job = 0 s
[2026-01-08 13:00:48] 2026-01-08 17:21:42,702 | INFO     | . initial setup = 5 s
[2026-01-08 13:00:48] 2026-01-08 17:21:42,702 | INFO     | . payload setup = 49 s
[2026-01-08 13:00:48] 2026-01-08 17:21:42,702 | INFO     | . stage-in = 0 s
[2026-01-08 13:00:48] 2026-01-08 17:21:42,702 | INFO     | . payload execution = 30502 s
[2026-01-08 13:00:48] 2026-01-08 17:21:42,702 | INFO     | . stage-out = 4 s
[2026-01-08 13:00:48] 2026-01-08 17:21:42,702 | INFO     | . log creation = 0 s
[2026-01-08 13:00:48] 2026-01-08 17:21:42,702 | INFO     | ..............................
[2026-01-08 13:00:48] 2026-01-08 17:21:42,728 | INFO     | time since job start (30680s) is within the limit (174528.0s)
[2026-01-08 13:00:48] 2026-01-08 17:21:43,135 | INFO     | 
[2026-01-08 13:00:48] 2026-01-08 17:21:43,135 | INFO     | job summary report
[2026-01-08 13:00:48] 2026-01-08 17:21:43,136 | INFO     | --------------------------------------------------
[2026-01-08 13:00:48] 2026-01-08 17:21:43,136 | INFO     | PanDA job id: 6962915993
[2026-01-08 13:00:48] 2026-01-08 17:21:43,136 | INFO     | task id: 47898826
[2026-01-08 13:00:48] 2026-01-08 17:21:43,136 | INFO     | errors: (none)
[2026-01-08 13:00:48] 2026-01-08 17:21:43,136 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 13:00:48] 2026-01-08 17:21:43,136 | INFO     | pilot state: finished 
[2026-01-08 13:00:48] 2026-01-08 17:21:43,136 | INFO     | transexitcode: 0
[2026-01-08 13:00:48] 2026-01-08 17:21:43,136 | INFO     | exeerrorcode: 0
[2026-01-08 13:00:48] 2026-01-08 17:21:43,136 | INFO     | exeerrordiag: 
[2026-01-08 13:00:48] 2026-01-08 17:21:43,136 | INFO     | exitcode: 0
[2026-01-08 13:00:48] 2026-01-08 17:21:43,136 | INFO     | exitmsg: OK
[2026-01-08 13:00:48] 2026-01-08 17:21:43,136 | INFO     | cpuconsumptiontime: 57815 s
[2026-01-08 13:00:48] 2026-01-08 17:21:43,136 | INFO     | nevents: 400
[2026-01-08 13:00:48] 2026-01-08 17:21:43,136 | INFO     | neventsw: 0
[2026-01-08 13:00:48] 2026-01-08 17:21:43,136 | INFO     | pid: 2892928
[2026-01-08 13:00:48] 2026-01-08 17:21:43,136 | INFO     | pgrp: 2892928
[2026-01-08 13:00:48] 2026-01-08 17:21:43,137 | INFO     | corecount: 8
[2026-01-08 13:00:48] 2026-01-08 17:21:43,137 | INFO     | event service: False
[2026-01-08 13:00:48] 2026-01-08 17:21:43,137 | INFO     | sizes: {0: 2283140, 1: 2283741, 2: 2283825, 3: 2284052, 4: 2284052, 14: 2284080, 26: 2284236, 37: 2284264, 42: 2284554, 48: 2284610, 30557: 2323207, 30562: 2332205
[2026-01-08 13:00:48] 2026-01-08 17:21:43,137 | INFO     | --------------------------------------------------
[2026-01-08 13:00:48] 2026-01-08 17:21:43,137 | INFO     | 
[2026-01-08 13:00:48] 2026-01-08 17:21:43,137 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 13:00:48] 2026-01-08 17:21:43,314 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 13:00:48] 2026-01-08 17:21:43,315 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 13:00:48] 2026-01-08 17:21:43,315 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 13:00:48] 2026-01-08 17:21:43,315 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 13:00:48] 2026-01-08 17:21:43,315 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 13:00:48] 2026-01-08 17:21:43,315 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 13:00:48] 2026-01-08 17:21:43,315 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 13:00:48] 2026-01-08 17:21:43,315 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 13:00:48] 2026-01-08 17:21:43,315 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 13:00:48] 2026-01-08 17:21:43,315 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 13:00:48] 2026-01-08 17:21:43,315 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 13:00:48] 2026-01-08 17:21:43,315 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 13:00:48] 2026-01-08 17:21:43,315 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 13:00:48] 2026-01-08 17:21:43,315 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 13:00:48] 2026-01-08 17:21:43,316 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 13:00:48] 2026-01-08 17:21:43,316 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 13:00:48] 2026-01-08 17:21:43,316 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 13:00:48] 2026-01-08 17:21:43,316 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 13:00:48] 2026-01-08 17:21:43,316 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 13:00:48] 2026-01-08 17:21:43,316 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 13:00:48] 2026-01-08 17:21:43,316 | INFO     | job 6962915993 has completed (purged errors)
[2026-01-08 13:00:48] 2026-01-08 17:21:43,316 | INFO     | overall cleanup function is called
[2026-01-08 13:00:48] 2026-01-08 17:21:44,360 | INFO     | --- collectZombieJob: --- 10, [2892928]
[2026-01-08 13:00:48] 2026-01-08 17:21:44,360 | INFO     | zombie collector waiting for pid 2892928
[2026-01-08 13:00:48] 2026-01-08 17:21:44,360 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 13:00:48] 2026-01-08 17:21:44,361 | INFO     | collected zombie processes
[2026-01-08 13:00:48] 2026-01-08 17:21:44,361 | INFO     | will attempt to kill all subprocesses of pid=2892928
[2026-01-08 13:00:48] 2026-01-08 17:21:44,935 | INFO     | PID=2882131 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 13:00:48] 2026-01-08 17:21:44,935 | INFO     | .. there are 10 such processes running
[2026-01-08 13:00:48] 2026-01-08 17:21:44,964 | INFO     | process IDs to be killed: [2892928] (in reverse order)
[2026-01-08 13:00:48] 2026-01-08 17:21:45,303 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 13:00:48] 2026-01-08 17:21:45,303 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 13:00:48] 2026-01-08 17:21:45,323 | INFO     | did not find any defunct processes belonging to 2892928
[2026-01-08 13:00:48] 2026-01-08 17:21:45,342 | INFO     | did not find any defunct processes belonging to 2892928
[2026-01-08 13:00:48] 2026-01-08 17:21:45,343 | INFO     | ready for new job
[2026-01-08 13:00:48] 2026-01-08 17:21:45,347 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 13:00:48] 2026-01-08 17:21:45,350 | INFO     | ***************************************
[2026-01-08 13:00:48] 2026-01-08 17:21:45,351 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 13:00:48] 2026-01-08 17:21:45,351 | INFO     | ***************************************
[2026-01-08 13:00:48] 2026-01-08 17:21:45,351 | INFO     | 
[2026-01-08 13:00:48] 2026-01-08 17:21:45,354 | INFO     | architecture information:
[2026-01-08 13:00:48] 2026-01-08 17:21:45,354 | INFO     | executing command: cat /etc/os-release
[2026-01-08 13:00:48] 2026-01-08 17:21:45,373 | INFO     | cat /etc/os-release:
[2026-01-08 13:00:48] NAME="CentOS Linux"
[2026-01-08 13:00:48] VERSION="7 (Core)"
[2026-01-08 13:00:48] ID="centos"
[2026-01-08 13:00:48] ID_LIKE="rhel fedora"
[2026-01-08 13:00:48] VERSION_ID="7"
[2026-01-08 13:00:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 13:00:48] ANSI_COLOR="0;31"
[2026-01-08 13:00:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 13:00:48] HOME_URL="https://www.centos.org/"
[2026-01-08 13:00:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 13:00:48] 
[2026-01-08 13:00:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 13:00:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 13:00:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 13:00:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 13:00:48] 
[2026-01-08 13:00:48] 2026-01-08 17:21:45,374 | INFO     | ***************************************
[2026-01-08 13:00:48] 2026-01-08 17:21:45,876 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 13:00:48] 2026-01-08 17:21:46,099 | INFO     | sufficient remaining disk space (74526490624 B)
[2026-01-08 13:00:48] 2026-01-08 17:21:46,100 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 13:00:48] 2026-01-08 17:21:46,100 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 13:00:48] 2026-01-08 17:21:46,100 | INFO     | update_server=False
[2026-01-08 13:00:48] 2026-01-08 17:21:46,100 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 13:00:48] 2026-01-08 17:21:46,101 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 13:00:48] 2026-01-08 17:21:46,104 | INFO     | all data control threads have been joined
[2026-01-08 13:00:48] 2026-01-08 17:21:46,371 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 13:00:48] 2026-01-08 17:21:46,812 | INFO     | all job control threads have been joined
[2026-01-08 13:00:48] 2026-01-08 17:21:47,011 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 13:00:48] 2026-01-08 17:21:47,012 | INFO     | aborting loop
[2026-01-08 13:00:48] 2026-01-08 17:21:47,107 | INFO     | [job] retrieve thread has finished
[2026-01-08 13:00:48] 2026-01-08 17:21:47,110 | INFO     | [data] control thread has finished
[2026-01-08 13:00:48] 2026-01-08 17:21:47,233 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 13:00:48] 2026-01-08 17:21:47,244 | INFO     | [payload] failed_post thread has finished
[2026-01-08 13:00:48] 2026-01-08 17:21:47,268 | INFO     | all payload control threads have been joined
[2026-01-08 13:00:48] 2026-01-08 17:21:47,797 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 13:00:48] 2026-01-08 17:21:47,818 | INFO     | [job] control thread has finished
[2026-01-08 13:00:48] 2026-01-08 17:21:47,899 | INFO     | [payload] validate_post thread has finished
[2026-01-08 13:00:48] 2026-01-08 17:21:48,017 | INFO     | [job] job monitor thread has finished
[2026-01-08 13:00:48] 2026-01-08 17:21:48,108 | INFO     | [data] copytool_out thread has finished
[2026-01-08 13:00:48] 2026-01-08 17:21:48,121 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 13:00:48] 2026-01-08 17:21:48,140 | INFO     | [job] validate thread has finished
[2026-01-08 13:00:48] 2026-01-08 17:21:48,274 | INFO     | [payload] control thread has finished
[2026-01-08 13:00:48] 2026-01-08 17:21:48,521 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 13:00:48] 2026-01-08 17:21:48,579 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 13:00:48] 2026-01-08 17:21:48,640 | INFO     | [data] copytool_in thread has finished
[2026-01-08 13:00:48] 2026-01-08 17:21:49,129 | INFO     | [job] queue monitor thread has finished
[2026-01-08 13:00:48] 2026-01-08 17:21:50,380 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 13:00:48] 2026-01-08 17:22:17,095 | INFO     | [monitor] cgroup control has ended
[2026-01-08 13:00:48] 2026-01-08 17:22:17,173 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139993731053376)>', '<ExcThread(monitor, started 139993225873152)>']
[2026-01-08 13:00:48] 2026-01-08 17:22:17,529 | INFO     | PID=2882131 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 13:00:48] 2026-01-08 17:22:17,529 | INFO     | .. there are 10 such processes running
[2026-01-08 13:00:48] 2026-01-08 17:22:17,529 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 13:00:48] 2026-01-08 17:22:17,529 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 13:00:48] 2026-01-08 17:22:17,529 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 13:00:48] 2026-01-08 17:22:17,529 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 13:00:48] 2026-01-08 17:22:17,529 | INFO     | [monitor] control thread has ended
[2026-01-08 13:00:48] 2026-01-08 17:22:22,200 | INFO     | all workflow threads have been joined
[2026-01-08 13:00:48] 2026-01-08 17:22:22,201 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 13:00:48] 2026-01-08 17:22:22,201 | INFO     | traces error code: 0
[2026-01-08 13:00:48] 2026-01-08 17:22:22,201 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 13:00:48] 2026-01-08 17:22:24,257 [wrapper] ==== pilot stdout END ====
[2026-01-08 13:00:48] 2026-01-08 17:22:24,322 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 13:00:48] 2026-01-08 17:22:24,337 [wrapper] pilotpid: 2882131
[2026-01-08 13:00:48] 2026-01-08 17:22:24,373 [wrapper] Pilot exit status: 0
[2026-01-08 13:00:48] 2026-01-08 17:22:24,473 [wrapper] pandaids: 6962915993
[2026-01-08 13:00:48] 2026-01-08 17:22:24,830 [wrapper] cleanup supervisor_pilot 4072817 2882132
[2026-01-08 13:00:48] 2026-01-08 17:22:24,841 [wrapper] Test setup, not cleaning
[2026-01-08 13:00:48] 2026-01-08 17:22:24,855 [wrapper] apfmon messages muted
[2026-01-08 13:00:48] 2026-01-08 17:22:24,896 [wrapper] ==== wrapper stdout END ====
[2026-01-08 13:00:48] 2026-01-08 17:22:24,911 [wrapper] ==== wrapper stderr END ====
[2026-01-08 13:00:48]  *** Error codes and diagnostics ***
[2026-01-08 13:00:48]     "exeErrorCode": 0,
[2026-01-08 13:00:48]     "exeErrorDiag": "",
[2026-01-08 13:00:48]     "pilotErrorCode": 0,
[2026-01-08 13:00:48]     "pilotErrorDiag": "",
[2026-01-08 13:00:48]  *** Listing of results directory ***
[2026-01-08 13:00:48] total 453888
[2026-01-08 13:00:48] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-08 13:00:48] -rwx------. 1 boincer umatlas     36322 Jan  8 03:02 runpilot2-wrapper.sh
[2026-01-08 13:00:48] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:04 queuedata.json
[2026-01-08 13:00:48] -rw-r--r--. 1 boincer umatlas       100 Jan  8 03:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 13:00:48] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 03:49 run_atlas
[2026-01-08 13:00:48] -rw-r--r--. 1 boincer umatlas       105 Jan  8 03:49 job.xml
[2026-01-08 13:00:48] -rw-r--r--. 2 boincer umatlas 226549749 Jan  8 03:49 EVNT.47898824._000441.pool.root.1
[2026-01-08 13:00:48] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 03:49 start_atlas.sh
[2026-01-08 13:00:48] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 03:49 shared
[2026-01-08 13:00:48] -rw-r--r--. 2 boincer umatlas    592396 Jan  8 03:49 input.tar.gz
[2026-01-08 13:00:48] -rw-r--r--. 1 boincer umatlas         0 Jan  8 03:49 boinc_lockfile
[2026-01-08 13:00:48] -rw-r--r--. 1 boincer umatlas      2518 Jan  8 03:49 pandaJob.out
[2026-01-08 13:00:48] -rw-------. 1 boincer umatlas        57 Jan  8 03:49 setup.sh.local
[2026-01-08 13:00:48] -rw-------. 1 boincer umatlas    989819 Jan  8 03:50 agis_schedconf.cvmfs.json
[2026-01-08 13:00:48] drwx------. 5 boincer umatlas      4096 Jan  8 03:50 pilot3
[2026-01-08 13:00:48] -rw-------. 1 boincer umatlas 224793635 Jan  8 12:16 HITS.47898826._018581.pool.root.1
[2026-01-08 13:00:48] -rw-r--r--. 1 boincer umatlas       531 Jan  8 12:17 boinc_task_state.xml
[2026-01-08 13:00:48] -rw-------. 1 boincer umatlas      1040 Jan  8 12:20 memory_monitor_summary.json
[2026-01-08 13:00:48] -rw-------. 1 boincer umatlas   1516240 Jan  8 12:21 agis_ddmendpoints.agis.ALL.json
[2026-01-08 13:00:48] -rw-------. 1 boincer umatlas    677719 Jan  8 12:21 log.47898826._018581.job.log.tgz.1
[2026-01-08 13:00:48] -rw-------. 1 boincer umatlas        95 Jan  8 12:21 pilot_heartbeat.json
[2026-01-08 13:00:48] -rw-------. 1 boincer umatlas      7826 Jan  8 12:21 heartbeat.json
[2026-01-08 13:00:48] -rw-------. 1 boincer umatlas      4824 Jan  8 12:22 pilotlog.txt
[2026-01-08 13:00:48] -rw-------. 1 boincer umatlas   4082601 Jan  8 12:22 log.47898826._018581.job.log.1
[2026-01-08 13:00:48] -rw-------. 1 boincer umatlas       357 Jan  8 12:22 output.list
[2026-01-08 13:00:48] -rw-r--r--. 1 boincer umatlas       620 Jan  8 12:22 runtime_log
[2026-01-08 13:00:48] -rw-------. 1 boincer umatlas   4782080 Jan  8 12:22 result.tar.gz
[2026-01-08 13:00:48] -rw-r--r--. 1 boincer umatlas      9348 Jan  8 12:22 runtime_log.err
[2026-01-08 13:00:48] -rw-------. 1 boincer umatlas       658 Jan  8 12:22 AcMNDmH9zx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlOeKDm0ExqFo.diag
[2026-01-08 13:00:48] -rw-r--r--. 1 boincer umatlas      6843 Jan  8 13:00 init_data.xml
[2026-01-08 13:00:48] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 13:00 boinc_mmap_file
[2026-01-08 13:00:48] -rw-r--r--. 1 boincer umatlas     21332 Jan  8 13:00 stderr.txt
[2026-01-08 13:00:48] -rw-r--r--. 1 boincer umatlas        28 Jan  8 13:00 wrapper_checkpoint.txt
[2026-01-08 13:00:48] HITS file was successfully produced:
[2026-01-08 13:00:48] -rw-------. 1 boincer umatlas 224793635 Jan  8 12:16 shared/HITS.pool.root.1
[2026-01-08 13:00:48]  *** Contents of shared directory: ***
[2026-01-08 13:00:48] total 446040
[2026-01-08 13:00:48] -rw-r--r--. 2 boincer umatlas 226549749 Jan  8 03:49 ATLAS.root_0
[2026-01-08 13:00:48] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 03:49 start_atlas.sh
[2026-01-08 13:00:48] -rw-r--r--. 2 boincer umatlas    592396 Jan  8 03:49 input.tar.gz
[2026-01-08 13:00:48] -rw-------. 1 boincer umatlas 224793635 Jan  8 12:16 HITS.pool.root.1
[2026-01-08 13:00:48] -rw-------. 1 boincer umatlas   4782080 Jan  8 12:22 result.tar.gz
13:00:49 (2876382): run_atlas exited; CPU time 58596.449248
13:00:49 (2876382): called boinc_finish(0)

</stderr_txt>
]]>

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