Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:40:50 (1142055): wrapper (7.7.26015): starting
04:40:50 (1142055): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 04:40:50] Arguments: --nthreads 8
[2026-01-08 04:40:50] Threads: 8
[2026-01-08 04:40:50] Checking for CVMFS
[2026-01-08 04:40:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 04:40:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 04:40:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 04:40:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 04:40:52] 2.13.3.0 3539256 15301 212136 154898 0 96 39906109 40960001 12770 16776704 0 28809586 99.512 43345824 34644 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 04:40:52] CVMFS is ok
[2026-01-08 04:40:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 04:40:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 04:40:52] Further information can be found at the LHC@home message board.
[2026-01-08 04:40:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 04:40:52] Checking for apptainer binary...
[2026-01-08 04:40:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 04:40:52] Running /usr/bin/apptainer --version
[2026-01-08 04:40:52] apptainer version 1.4.5-2.el9
[2026-01-08 04:40:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 04:40:53] c-210-31-1.aglt2.org
[2026-01-08 04:40:53] apptainer works
[2026-01-08 04:40:53] Set ATHENA_PROC_NUMBER=8
[2026-01-08 04:40:53] Set ATHENA_CORE_NUMBER=8
[2026-01-08 04:40:53] Starting ATLAS job with PandaID=6962915807
[2026-01-08 04:40:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 16:38:42]  *** The last 200 lines of the pilot log: ***
[2026-01-08 16:38:42] 2026-01-08 21:37:39,355 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 16:38:42] 2026-01-08 21:37:40,107 | INFO     | time since job start (42927s) is within the limit (174528.0s)
[2026-01-08 16:38:42] 2026-01-08 21:37:41,861 | INFO     | monitor loop #2397: job 0:6962915807 is in state 'finished'
[2026-01-08 16:38:42] 2026-01-08 21:37:41,861 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 16:38:42] 2026-01-08 21:37:42,114 | INFO     | time since job start (42929s) is within the limit (174528.0s)
[2026-01-08 16:38:42] 2026-01-08 21:37:44,123 | INFO     | time since job start (42931s) is within the limit (174528.0s)
[2026-01-08 16:38:42] 2026-01-08 21:37:44,366 | INFO     | monitor loop #2398: job 0:6962915807 is in state 'finished'
[2026-01-08 16:38:42] 2026-01-08 21:37:44,366 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 16:38:42] 2026-01-08 21:37:45,710 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-08 16:38:42] 2026-01-08 21:37:45,713 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2913.871107142856
[2026-01-08 16:38:42] 2026-01-08 21:37:45,734 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6962915807/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 16:38:42] 2026-01-08 21:37:45,735 | INFO     | extracted standard info from prmon json
[2026-01-08 16:38:42] 2026-01-08 21:37:45,735 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 16:38:42] 2026-01-08 21:37:45,735 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 16:38:42] 2026-01-08 21:37:45,736 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 16:38:42] 2026-01-08 21:37:45,736 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 16:38:42] 2026-01-08 21:37:45,754 | INFO     | fitting pss+swap vs Time
[2026-01-08 16:38:42] 2026-01-08 21:37:45,760 | INFO     | sum of square deviations: 106812146501.12976
[2026-01-08 16:38:42] 2026-01-08 21:37:45,777 | INFO     | sum of deviations: 506627410802.3225
[2026-01-08 16:38:42] 2026-01-08 21:37:45,777 | INFO     | mean x: 1767886835.406562
[2026-01-08 16:38:42] 2026-01-08 21:37:45,777 | INFO     | mean y: 2509889.6690442227
[2026-01-08 16:38:42] 2026-01-08 21:37:45,777 | INFO     | intersect: -8382865363.547731
[2026-01-08 16:38:42] 2026-01-08 21:37:45,782 | INFO     | chi2: 2.8397964420743778
[2026-01-08 16:38:42] 2026-01-08 21:37:45,783 | INFO     | sum of square deviations: 104542827428.11491
[2026-01-08 16:38:42] 2026-01-08 21:37:45,800 | INFO     | sum of deviations: 500237338570.7239
[2026-01-08 16:38:42] 2026-01-08 21:37:45,805 | INFO     | mean x: 1767886682.908046
[2026-01-08 16:38:42] 2026-01-08 21:37:45,805 | INFO     | mean y: 2509460.245689655
[2026-01-08 16:38:42] 2026-01-08 21:37:45,805 | INFO     | intersect: -8456826784.133642
[2026-01-08 16:38:42] 2026-01-08 21:37:45,806 | INFO     | chi2: 2.839628096647707
[2026-01-08 16:38:42] 2026-01-08 21:37:45,806 | INFO     | current chi2=2.839628096647707 (change=0.00592808076581002 %)
[2026-01-08 16:38:42] 2026-01-08 21:37:45,806 | INFO     | right removable region: 695
[2026-01-08 16:38:42] 2026-01-08 21:37:45,807 | INFO     | sum of square deviations: 104542738612.11487
[2026-01-08 16:38:42] 2026-01-08 21:37:45,821 | INFO     | sum of deviations: 327057320928.3675
[2026-01-08 16:38:42] 2026-01-08 21:37:45,821 | INFO     | mean x: 1767886987.908046
[2026-01-08 16:38:42] 2026-01-08 21:37:45,821 | INFO     | mean y: 2521942.0057471264
[2026-01-08 16:38:42] 2026-01-08 21:37:45,821 | INFO     | intersect: -5528234087.971857
[2026-01-08 16:38:42] 2026-01-08 21:37:45,822 | INFO     | chi2: 0.3994725628020679
[2026-01-08 16:38:42] 2026-01-08 21:37:45,822 | INFO     | current chi2=0.3994725628020679 (change=85.93305643730343 %)
[2026-01-08 16:38:42] 2026-01-08 21:37:45,823 | INFO     | sum of square deviations: 102305789186.72932
[2026-01-08 16:38:42] 2026-01-08 21:37:45,831 | INFO     | sum of deviations: 297609087914.6384
[2026-01-08 16:38:42] 2026-01-08 21:37:45,831 | INFO     | mean x: 1767887140.406657
[2026-01-08 16:38:42] 2026-01-08 21:37:45,832 | INFO     | mean y: 2523946.7308248915
[2026-01-08 16:38:42] 2026-01-08 21:37:45,832 | INFO     | intersect: -5140286480.469244
[2026-01-08 16:38:42] 2026-01-08 21:37:45,832 | INFO     | chi2: 0.35147142595543623
[2026-01-08 16:38:42] 2026-01-08 21:37:45,832 | INFO     | current chi2=0.35147142595543623 (change=12.016128594647796 %)
[2026-01-08 16:38:42] 2026-01-08 21:37:45,832 | INFO     | left removable region: 20
[2026-01-08 16:38:42] 2026-01-08 21:37:45,833 | INFO     | sum of square deviations: 95362519812.19855
[2026-01-08 16:38:42] 2026-01-08 21:37:45,840 | INFO     | sum of deviations: 294792836865.3065
[2026-01-08 16:38:42] 2026-01-08 21:37:45,840 | INFO     | mean x: 1767887262.4014814
[2026-01-08 16:38:42] 2026-01-08 21:37:45,840 | INFO     | mean y: 2523331.493333333
[2026-01-08 16:38:42] 2026-01-08 21:37:45,841 | INFO     | intersect: -5462522080.139212
[2026-01-08 16:38:42] 2026-01-08 21:37:45,841 | INFO     | chi2: 0.3396170375906611
[2026-01-08 16:38:42] 2026-01-08 21:37:45,841 | INFO     | current memory leak: 3.09 B/s (using 675 data points, chi2=0.34)
[2026-01-08 16:38:42] 2026-01-08 21:37:45,842 | INFO     | could have reported an average CPU frequency of 2889 MHz (27 samples)
[2026-01-08 16:38:42] 2026-01-08 21:37:45,842 | INFO     | ..............................
[2026-01-08 16:38:42] 2026-01-08 21:37:45,843 | INFO     | . Timing measurements:
[2026-01-08 16:38:42] 2026-01-08 21:37:45,844 | INFO     | . get job = 0 s
[2026-01-08 16:38:42] 2026-01-08 21:37:45,844 | INFO     | . initial setup = 5 s
[2026-01-08 16:38:42] 2026-01-08 21:37:45,844 | INFO     | . payload setup = 46 s
[2026-01-08 16:38:42] 2026-01-08 21:37:45,844 | INFO     | . stage-in = 0 s
[2026-01-08 16:38:42] 2026-01-08 21:37:45,844 | INFO     | . payload execution = 42784 s
[2026-01-08 16:38:42] 2026-01-08 21:37:45,844 | INFO     | . stage-out = 2 s
[2026-01-08 16:38:42] 2026-01-08 21:37:45,844 | INFO     | . log creation = 0 s
[2026-01-08 16:38:42] 2026-01-08 21:37:45,844 | INFO     | ..............................
[2026-01-08 16:38:42] 2026-01-08 21:37:45,936 | INFO     | 
[2026-01-08 16:38:42] 2026-01-08 21:37:45,936 | INFO     | job summary report
[2026-01-08 16:38:42] 2026-01-08 21:37:45,936 | INFO     | --------------------------------------------------
[2026-01-08 16:38:42] 2026-01-08 21:37:45,937 | INFO     | PanDA job id: 6962915807
[2026-01-08 16:38:42] 2026-01-08 21:37:45,937 | INFO     | task id: 47898826
[2026-01-08 16:38:42] 2026-01-08 21:37:45,937 | INFO     | errors: (none)
[2026-01-08 16:38:42] 2026-01-08 21:37:45,937 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 16:38:42] 2026-01-08 21:37:45,937 | INFO     | pilot state: finished 
[2026-01-08 16:38:42] 2026-01-08 21:37:45,937 | INFO     | transexitcode: 0
[2026-01-08 16:38:42] 2026-01-08 21:37:45,937 | INFO     | exeerrorcode: 0
[2026-01-08 16:38:42] 2026-01-08 21:37:45,937 | INFO     | exeerrordiag: 
[2026-01-08 16:38:42] 2026-01-08 21:37:45,937 | INFO     | exitcode: 0
[2026-01-08 16:38:42] 2026-01-08 21:37:45,937 | INFO     | exitmsg: OK
[2026-01-08 16:38:42] 2026-01-08 21:37:45,937 | INFO     | cpuconsumptiontime: 56877 s
[2026-01-08 16:38:42] 2026-01-08 21:37:45,937 | INFO     | nevents: 400
[2026-01-08 16:38:42] 2026-01-08 21:37:45,937 | INFO     | neventsw: 0
[2026-01-08 16:38:42] 2026-01-08 21:37:45,937 | INFO     | pid: 1166798
[2026-01-08 16:38:42] 2026-01-08 21:37:45,938 | INFO     | pgrp: 1166798
[2026-01-08 16:38:42] 2026-01-08 21:37:45,938 | INFO     | corecount: 8
[2026-01-08 16:38:42] 2026-01-08 21:37:45,938 | INFO     | event service: False
[2026-01-08 16:38:42] 2026-01-08 21:37:45,938 | INFO     | sizes: {0: 2283741, 1: 2283825, 2: 2284024, 13: 2284024, 24: 2284080, 34: 2284370, 35: 2284526, 42834: 2327621, 42835: 2327620, 42838: 2336702, 42839: 2336758, 428
[2026-01-08 16:38:42] 2026-01-08 21:37:45,938 | INFO     | --------------------------------------------------
[2026-01-08 16:38:42] 2026-01-08 21:37:45,938 | INFO     | 
[2026-01-08 16:38:42] 2026-01-08 21:37:45,938 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-08 16:38:42] 2026-01-08 21:37:46,132 | INFO     | time since job start (42933s) is within the limit (174528.0s)
[2026-01-08 16:38:42] 2026-01-08 21:37:46,160 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 16:38:42] 2026-01-08 21:37:46,160 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 16:38:42] 2026-01-08 21:37:46,160 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 16:38:42] 2026-01-08 21:37:46,160 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 16:38:42] 2026-01-08 21:37:46,160 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 16:38:42] 2026-01-08 21:37:46,160 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 16:38:42] 2026-01-08 21:37:46,160 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 16:38:42] 2026-01-08 21:37:46,161 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 16:38:42] 2026-01-08 21:37:46,161 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 16:38:42] 2026-01-08 21:37:46,161 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 16:38:42] 2026-01-08 21:37:46,161 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 16:38:42] 2026-01-08 21:37:46,161 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 16:38:42] 2026-01-08 21:37:46,161 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 16:38:42] 2026-01-08 21:37:46,161 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 16:38:42] 2026-01-08 21:37:46,161 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 16:38:42] 2026-01-08 21:37:46,161 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 16:38:42] 2026-01-08 21:37:46,161 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 16:38:42] 2026-01-08 21:37:46,161 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 16:38:42] 2026-01-08 21:37:46,161 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 16:38:42] 2026-01-08 21:37:46,162 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 16:38:42] 2026-01-08 21:37:46,162 | INFO     | job 6962915807 has completed (purged errors)
[2026-01-08 16:38:42] 2026-01-08 21:37:46,162 | INFO     | overall cleanup function is called
[2026-01-08 16:38:42] 2026-01-08 21:37:47,192 | INFO     | --- collectZombieJob: --- 10, [1166798]
[2026-01-08 16:38:42] 2026-01-08 21:37:47,193 | INFO     | zombie collector waiting for pid 1166798
[2026-01-08 16:38:42] 2026-01-08 21:37:47,193 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 16:38:42] 2026-01-08 21:37:47,193 | INFO     | collected zombie processes
[2026-01-08 16:38:42] 2026-01-08 21:37:47,193 | INFO     | will attempt to kill all subprocesses of pid=1166798
[2026-01-08 16:38:42] 2026-01-08 21:37:47,636 | INFO     | process IDs to be killed: [1166798] (in reverse order)
[2026-01-08 16:38:42] 2026-01-08 21:37:47,767 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 16:38:42] 2026-01-08 21:37:47,768 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 16:38:42] 2026-01-08 21:37:47,780 | INFO     | did not find any defunct processes belonging to 1166798
[2026-01-08 16:38:42] 2026-01-08 21:37:47,892 | INFO     | did not find any defunct processes belonging to 1166798
[2026-01-08 16:38:42] 2026-01-08 21:37:47,893 | INFO     | ready for new job
[2026-01-08 16:38:42] 2026-01-08 21:37:47,893 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 16:38:42] 2026-01-08 21:37:47,931 | INFO     | ***************************************
[2026-01-08 16:38:42] 2026-01-08 21:37:47,932 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 16:38:42] 2026-01-08 21:37:47,932 | INFO     | ***************************************
[2026-01-08 16:38:42] 2026-01-08 21:37:47,932 | INFO     | 
[2026-01-08 16:38:42] 2026-01-08 21:37:47,940 | INFO     | architecture information:
[2026-01-08 16:38:42] 2026-01-08 21:37:47,954 | INFO     | executing command: cat /etc/os-release
[2026-01-08 16:38:42] 2026-01-08 21:37:48,132 | INFO     | cat /etc/os-release:
[2026-01-08 16:38:42] NAME="CentOS Linux"
[2026-01-08 16:38:42] VERSION="7 (Core)"
[2026-01-08 16:38:42] ID="centos"
[2026-01-08 16:38:42] ID_LIKE="rhel fedora"
[2026-01-08 16:38:42] VERSION_ID="7"
[2026-01-08 16:38:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 16:38:42] ANSI_COLOR="0;31"
[2026-01-08 16:38:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 16:38:42] HOME_URL="https://www.centos.org/"
[2026-01-08 16:38:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 16:38:42] 
[2026-01-08 16:38:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 16:38:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 16:38:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 16:38:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 16:38:42] 
[2026-01-08 16:38:42] 2026-01-08 21:37:48,132 | INFO     | ***************************************
[2026-01-08 16:38:42] 2026-01-08 21:37:48,636 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-08 16:38:42] 2026-01-08 21:37:48,718 | INFO     | sufficient remaining disk space (74323066880 B)
[2026-01-08 16:38:42] 2026-01-08 21:37:48,718 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 16:38:42] 2026-01-08 21:37:48,719 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 16:38:42] 2026-01-08 21:37:48,719 | INFO     | update_server=False
[2026-01-08 16:38:42] 2026-01-08 21:37:48,719 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 16:38:42] 2026-01-08 21:37:48,719 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 16:38:42] 2026-01-08 21:37:48,719 | INFO     | aborting loop
[2026-01-08 16:38:42] 2026-01-08 21:37:48,720 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 16:38:42] 2026-01-08 21:37:48,772 | INFO     | all data control threads have been joined
[2026-01-08 16:38:42] 2026-01-08 21:37:48,824 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 16:38:42] 2026-01-08 21:37:49,361 | INFO     | all payload control threads have been joined
[2026-01-08 16:38:42] 2026-01-08 21:37:49,562 | INFO     | all job control threads have been joined
[2026-01-08 16:38:42] 2026-01-08 21:37:49,726 | INFO     | [job] retrieve thread has finished
[2026-01-08 16:38:42] 2026-01-08 21:37:49,726 | INFO     | [job] job monitor thread has finished
[2026-01-08 16:38:42] 2026-01-08 21:37:49,778 | INFO     | [data] control thread has finished
[2026-01-08 16:38:42] 2026-01-08 21:37:49,903 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 16:38:42] 2026-01-08 21:37:49,925 | INFO     | [job] validate thread has finished
[2026-01-08 16:38:42] 2026-01-08 21:37:50,190 | INFO     | [payload] validate_post thread has finished
[2026-01-08 16:38:42] 2026-01-08 21:37:50,218 | INFO     | [payload] failed_post thread has finished
[2026-01-08 16:38:42] 2026-01-08 21:37:50,367 | INFO     | [payload] control thread has finished
[2026-01-08 16:38:42] 2026-01-08 21:37:50,569 | INFO     | [job] control thread has finished
[2026-01-08 16:38:42] 2026-01-08 21:37:50,681 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 16:38:42] 2026-01-08 21:37:50,831 | INFO     | [data] copytool_out thread has finished
[2026-01-08 16:38:42] 2026-01-08 21:37:50,958 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 16:38:42] 2026-01-08 21:37:51,011 | INFO     | [data] copytool_in thread has finished
[2026-01-08 16:38:42] 2026-01-08 21:37:51,171 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 16:38:42] 2026-01-08 21:37:51,177 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 16:38:42] 2026-01-08 21:37:51,964 | INFO     | [job] queue monitor thread has finished
[2026-01-08 16:38:42] 2026-01-08 21:37:52,734 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 16:38:42] 2026-01-08 21:38:21,060 | INFO     | PID=1149618 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 16:38:42] 2026-01-08 21:38:21,060 | INFO     | .. there are 16 such processes running
[2026-01-08 16:38:42] 2026-01-08 21:38:21,061 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 16:38:42] 2026-01-08 21:38:21,061 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 16:38:42] 2026-01-08 21:38:21,061 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 16:38:42] 2026-01-08 21:38:32,935 | INFO     | [monitor] cgroup control has ended
[2026-01-08 16:38:42] 2026-01-08 21:38:34,944 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140219638617920)>', '<ExcThread(monitor, started 140219357562624)>']
[2026-01-08 16:38:42] 2026-01-08 21:38:35,186 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 16:38:42] 2026-01-08 21:38:35,187 | INFO     | [monitor] control thread has ended
[2026-01-08 16:38:42] 2026-01-08 21:38:39,970 | INFO     | all workflow threads have been joined
[2026-01-08 16:38:42] 2026-01-08 21:38:39,970 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 16:38:42] 2026-01-08 21:38:39,970 | INFO     | traces error code: 0
[2026-01-08 16:38:42] 2026-01-08 21:38:39,971 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 16:38:42] 2026-01-08 21:38:41,647 [wrapper] ==== pilot stdout END ====
[2026-01-08 16:38:42] 2026-01-08 21:38:41,723 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 16:38:42] 2026-01-08 21:38:41,773 [wrapper] pilotpid: 1149618
[2026-01-08 16:38:42] 2026-01-08 21:38:41,840 [wrapper] Pilot exit status: 0
[2026-01-08 16:38:42] 2026-01-08 21:38:42,004 [wrapper] pandaids: 6962915807
[2026-01-08 16:38:42] 2026-01-08 21:38:42,281 [wrapper] cleanup supervisor_pilot 2953107 1149619
[2026-01-08 16:38:42] 2026-01-08 21:38:42,285 [wrapper] Test setup, not cleaning
[2026-01-08 16:38:42] 2026-01-08 21:38:42,287 [wrapper] apfmon messages muted
[2026-01-08 16:38:42] 2026-01-08 21:38:42,290 [wrapper] ==== wrapper stdout END ====
[2026-01-08 16:38:42] 2026-01-08 21:38:42,293 [wrapper] ==== wrapper stderr END ====
[2026-01-08 16:38:42]  *** Error codes and diagnostics ***
[2026-01-08 16:38:42]     "exeErrorCode": 0,
[2026-01-08 16:38:42]     "exeErrorDiag": "",
[2026-01-08 16:38:42]     "pilotErrorCode": 0,
[2026-01-08 16:38:42]     "pilotErrorDiag": "",
[2026-01-08 16:38:42]  *** Listing of results directory ***
[2026-01-08 16:38:42] total 451352
[2026-01-08 16:38:42] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-08 16:38:42] -rwx------. 1 boincer umatlas     36322 Jan  8 03:02 runpilot2-wrapper.sh
[2026-01-08 16:38:42] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:04 queuedata.json
[2026-01-08 16:38:42] -rw-r--r--. 1 boincer umatlas       100 Jan  8 04:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 16:38:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 04:40 run_atlas
[2026-01-08 16:38:42] -rw-r--r--. 1 boincer umatlas       105 Jan  8 04:40 job.xml
[2026-01-08 16:38:42] -rw-r--r--. 2 boincer umatlas 227021340 Jan  8 04:40 EVNT.47898824._000433.pool.root.1
[2026-01-08 16:38:42] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 04:40 start_atlas.sh
[2026-01-08 16:38:42] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 04:40 shared
[2026-01-08 16:38:42] -rw-r--r--. 2 boincer umatlas    592395 Jan  8 04:40 input.tar.gz
[2026-01-08 16:38:42] -rw-r--r--. 1 boincer umatlas         0 Jan  8 04:40 boinc_lockfile
[2026-01-08 16:38:42] -rw-r--r--. 1 boincer umatlas      2518 Jan  8 04:40 pandaJob.out
[2026-01-08 16:38:42] -rw-------. 1 boincer umatlas        57 Jan  8 04:40 setup.sh.local
[2026-01-08 16:38:42] -rw-------. 1 boincer umatlas    989843 Jan  8 04:42 agis_schedconf.cvmfs.json
[2026-01-08 16:38:42] drwx------. 5 boincer umatlas      4096 Jan  8 04:42 pilot3
[2026-01-08 16:38:42] -rw-------. 1 boincer umatlas 219470900 Jan  8 16:36 HITS.47898826._018395.pool.root.1
[2026-01-08 16:38:42] -rw-r--r--. 1 boincer umatlas       531 Jan  8 16:36 boinc_task_state.xml
[2026-01-08 16:38:42] -rw-r--r--. 1 boincer umatlas      6843 Jan  8 16:36 init_data.xml
[2026-01-08 16:38:42] -rw-------. 1 boincer umatlas      1042 Jan  8 16:37 memory_monitor_summary.json
[2026-01-08 16:38:42] -rw-------. 1 boincer umatlas   1516240 Jan  8 16:37 agis_ddmendpoints.agis.ALL.json
[2026-01-08 16:38:42] -rw-------. 1 boincer umatlas    810579 Jan  8 16:37 log.47898826._018395.job.log.tgz.1
[2026-01-08 16:38:42] -rw-------. 1 boincer umatlas        95 Jan  8 16:37 pilot_heartbeat.json
[2026-01-08 16:38:42] -rw-------. 1 boincer umatlas      7828 Jan  8 16:37 heartbeat.json
[2026-01-08 16:38:42] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 16:38 boinc_mmap_file
[2026-01-08 16:38:42] -rw-r--r--. 1 boincer umatlas        28 Jan  8 16:38 wrapper_checkpoint.txt
[2026-01-08 16:38:42] -rw-------. 1 boincer umatlas      4824 Jan  8 16:38 pilotlog.txt
[2026-01-08 16:38:42] -rw-------. 1 boincer umatlas   5077075 Jan  8 16:38 log.47898826._018395.job.log.1
[2026-01-08 16:38:42] -rw-------. 1 boincer umatlas       357 Jan  8 16:38 output.list
[2026-01-08 16:38:42] -rw-r--r--. 1 boincer umatlas       620 Jan  8 16:38 runtime_log
[2026-01-08 16:38:42] -rw-------. 1 boincer umatlas   5908480 Jan  8 16:38 result.tar.gz
[2026-01-08 16:38:42] -rw-r--r--. 1 boincer umatlas      9353 Jan  8 16:38 runtime_log.err
[2026-01-08 16:38:42] -rw-------. 1 boincer umatlas       660 Jan  8 16:38 r6uMDmE9zx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmONeKDmd2ZrTo.diag
[2026-01-08 16:38:42] -rw-r--r--. 1 boincer umatlas     21461 Jan  8 16:38 stderr.txt
[2026-01-08 16:38:42] HITS file was successfully produced:
[2026-01-08 16:38:42] -rw-------. 1 boincer umatlas 219470900 Jan  8 16:36 shared/HITS.pool.root.1
[2026-01-08 16:38:42]  *** Contents of shared directory: ***
[2026-01-08 16:38:42] total 442404
[2026-01-08 16:38:42] -rw-r--r--. 2 boincer umatlas 227021340 Jan  8 04:40 ATLAS.root_0
[2026-01-08 16:38:42] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 04:40 start_atlas.sh
[2026-01-08 16:38:42] -rw-r--r--. 2 boincer umatlas    592395 Jan  8 04:40 input.tar.gz
[2026-01-08 16:38:42] -rw-------. 1 boincer umatlas 219470900 Jan  8 16:36 HITS.pool.root.1
[2026-01-08 16:38:42] -rw-------. 1 boincer umatlas   5908480 Jan  8 16:38 result.tar.gz
16:38:43 (1142055): run_atlas exited; CPU time 58104.732082
16:38:43 (1142055): called boinc_finish(0)

</stderr_txt>
]]>

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