Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:16:10 (585006): wrapper (7.7.26015): starting
23:16:10 (585006): wrapper: running run_atlas (--nthreads 4)
[2026-01-12 23:16:10] Arguments: --nthreads 4
[2026-01-12 23:16:10] Threads: 4
[2026-01-12 23:16:10] Checking for CVMFS
[2026-01-12 23:16:10] No cvmfs_config command found, will try listing directly
[2026-01-12 23:16:10] CVMFS is ok
[2026-01-12 23:16:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 23:16:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 23:16:10] Further information can be found at the LHC@home message board.
[2026-01-12 23:16:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 23:16:10] Checking for apptainer binary...
[2026-01-12 23:16:10] which: no apptainer in ((null))
[2026-01-12 23:16:10] apptainer is not installed, using version from CVMFS
[2026-01-12 23:16:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 23:16:10] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-01-12 23:16:10] apptainer works
[2026-01-12 23:16:10] Set ATHENA_PROC_NUMBER=4
[2026-01-12 23:16:10] Set ATHENA_CORE_NUMBER=4
[2026-01-12 23:16:10] Starting ATLAS job with PandaID=6962915511
[2026-01-12 23:16:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 02:28:43]  *** The last 200 lines of the pilot log: ***
[2026-01-13 02:28:43] 2026-01-13 01:19:15,998 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 02:28:43] 2026-01-13 01:19:16,015 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2709.851804687499
[2026-01-13 02:28:43] 2026-01-13 01:19:16,036 | INFO     | using path: /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-6962915511/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 02:28:43] 2026-01-13 01:19:16,037 | INFO     | extracted standard info from prmon json
[2026-01-13 02:28:43] 2026-01-13 01:19:16,037 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 02:28:43] 2026-01-13 01:19:16,037 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 02:28:43] 2026-01-13 01:19:16,038 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-13 02:28:43] 2026-01-13 01:19:16,038 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-13 02:28:43] 2026-01-13 01:19:16,041 | INFO     | fitting pss+swap vs Time
[2026-01-13 02:28:43] 2026-01-13 01:19:16,041 | INFO     | sum of square deviations: 1808350185.0
[2026-01-13 02:28:43] 2026-01-13 01:19:16,042 | INFO     | sum of deviations: -53489464456.5
[2026-01-13 02:28:43] 2026-01-13 01:19:16,042 | INFO     | mean x: 1768261677.5
[2026-01-13 02:28:43] 2026-01-13 01:19:16,042 | INFO     | mean y: 2400455.638888889
[2026-01-13 02:28:43] 2026-01-13 01:19:16,042 | INFO     | intersect: 52306080867.19994
[2026-01-13 02:28:43] 2026-01-13 01:19:16,043 | INFO     | chi2: 2.09301019795562
[2026-01-13 02:28:43] 2026-01-13 01:19:16,043 | INFO     | sum of square deviations: 1661798600.0
[2026-01-13 02:28:43] 2026-01-13 01:19:16,044 | INFO     | sum of deviations: -41100991689.00001
[2026-01-13 02:28:43] 2026-01-13 01:19:16,044 | INFO     | mean x: 1768261525.0
[2026-01-13 02:28:43] 2026-01-13 01:19:16,044 | INFO     | mean y: 2413107.0742857144
[2026-01-13 02:28:43] 2026-01-13 01:19:16,044 | INFO     | intersect: 43736534824.954834
[2026-01-13 02:28:43] 2026-01-13 01:19:16,044 | INFO     | chi2: 1.4347810647592205
[2026-01-13 02:28:43] 2026-01-13 01:19:16,044 | INFO     | current chi2=1.4347810647592205 (change=31.448921454818272 %)
[2026-01-13 02:28:43] 2026-01-13 01:19:16,045 | INFO     | sum of square deviations: 1523386702.5
[2026-01-13 02:28:43] 2026-01-13 01:19:16,046 | INFO     | sum of deviations: -39212299502.0
[2026-01-13 02:28:43] 2026-01-13 01:19:16,046 | INFO     | mean x: 1768261372.5
[2026-01-13 02:28:43] 2026-01-13 01:19:16,046 | INFO     | mean y: 2415188.9411764704
[2026-01-13 02:28:43] 2026-01-13 01:19:16,046 | INFO     | intersect: 45517841063.73648
[2026-01-13 02:28:43] 2026-01-13 01:19:16,046 | INFO     | chi2: 1.4281579986322064
[2026-01-13 02:28:43] 2026-01-13 01:19:16,046 | INFO     | current chi2=1.4281579986322064 (change=0.4616081358813855 %)
[2026-01-13 02:28:43] 2026-01-13 01:19:16,046 | INFO     | right removable region: 169
[2026-01-13 02:28:43] 2026-01-13 01:19:16,046 | INFO     | sum of square deviations: 1661798600.0
[2026-01-13 02:28:43] 2026-01-13 01:19:16,047 | INFO     | sum of deviations: -69984916432.0
[2026-01-13 02:28:43] 2026-01-13 01:19:16,048 | INFO     | mean x: 1768261830.0
[2026-01-13 02:28:43] 2026-01-13 01:19:16,048 | INFO     | mean y: 2417263.0342857144
[2026-01-13 02:28:43] 2026-01-13 01:19:16,048 | INFO     | intersect: 74470921690.97484
[2026-01-13 02:28:43] 2026-01-13 01:19:16,048 | INFO     | chi2: 0.9610747595370032
[2026-01-13 02:28:43] 2026-01-13 01:19:16,048 | INFO     | current chi2=0.9610747595370032 (change=54.081697237990156 %)
[2026-01-13 02:28:43] 2026-01-13 01:19:16,048 | INFO     | sum of square deviations: 1523386702.5
[2026-01-13 02:28:43] 2026-01-13 01:19:16,049 | INFO     | sum of deviations: -64104861874.999985
[2026-01-13 02:28:43] 2026-01-13 01:19:16,049 | INFO     | mean x: 1768261982.5
[2026-01-13 02:28:43] 2026-01-13 01:19:16,049 | INFO     | mean y: 2410772.988235294
[2026-01-13 02:28:43] 2026-01-13 01:19:16,049 | INFO     | intersect: 74411744897.37885
[2026-01-13 02:28:43] 2026-01-13 01:19:16,050 | INFO     | chi2: 0.9605584143298946
[2026-01-13 02:28:43] 2026-01-13 01:19:16,050 | INFO     | current chi2=0.9605584143298946 (change=0.05372581081593225 %)
[2026-01-13 02:28:43] 2026-01-13 01:19:16,050 | INFO     | left removable region: 20
[2026-01-13 02:28:43] 2026-01-13 01:19:16,050 | INFO     | sum of square deviations: 1025693650.0
[2026-01-13 02:28:43] 2026-01-13 01:19:16,051 | INFO     | sum of deviations: -37316855163.99999
[2026-01-13 02:28:43] 2026-01-13 01:19:16,051 | INFO     | mean x: 1768261952.0
[2026-01-13 02:28:43] 2026-01-13 01:19:16,051 | INFO     | mean y: 2410540.2684563757
[2026-01-13 02:28:43] 2026-01-13 01:19:16,051 | INFO     | intersect: 64335435469.10165
[2026-01-13 02:28:43] 2026-01-13 01:19:16,051 | INFO     | chi2: 0.25892550490240973
[2026-01-13 02:28:43] 2026-01-13 01:19:16,051 | INFO     | current memory leak: -36.38 B/s (using 149 data points, chi2=0.26)
[2026-01-13 02:28:43] 2026-01-13 01:19:16,052 | INFO     | could have reported an average CPU frequency of 2736 MHz (10 samples)
[2026-01-13 02:28:43] 2026-01-13 01:19:16,052 | INFO     | ..............................
[2026-01-13 02:28:43] 2026-01-13 01:19:16,052 | INFO     | . Timing measurements:
[2026-01-13 02:28:43] 2026-01-13 01:19:16,052 | INFO     | . get job = 0 s
[2026-01-13 02:28:43] 2026-01-13 01:19:16,052 | INFO     | . initial setup = 1 s
[2026-01-13 02:28:43] 2026-01-13 01:19:16,052 | INFO     | . payload setup = 8 s
[2026-01-13 02:28:43] 2026-01-13 01:19:16,052 | INFO     | . stage-in = 0 s
[2026-01-13 02:28:43] 2026-01-13 01:19:16,052 | INFO     | . payload execution = 10932 s
[2026-01-13 02:28:43] 2026-01-13 01:19:16,052 | INFO     | . stage-out = 1 s
[2026-01-13 02:28:43] 2026-01-13 01:19:16,052 | INFO     | . log creation = 0 s
[2026-01-13 02:28:43] 2026-01-13 01:19:16,052 | INFO     | ..............................
[2026-01-13 02:28:43] 2026-01-13 01:19:16,131 | INFO     | time since job start (10972s) is within the limit (174528.0s)
[2026-01-13 02:28:43] 2026-01-13 01:19:16,134 | INFO     | 
[2026-01-13 02:28:43] 2026-01-13 01:19:16,134 | INFO     | job summary report
[2026-01-13 02:28:43] 2026-01-13 01:19:16,134 | INFO     | --------------------------------------------------
[2026-01-13 02:28:43] 2026-01-13 01:19:16,134 | INFO     | PanDA job id: 6962915511
[2026-01-13 02:28:43] 2026-01-13 01:19:16,134 | INFO     | task id: 47898826
[2026-01-13 02:28:43] 2026-01-13 01:19:16,134 | INFO     | errors: (none)
[2026-01-13 02:28:43] 2026-01-13 01:19:16,134 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 02:28:43] 2026-01-13 01:19:16,134 | INFO     | pilot state: finished 
[2026-01-13 02:28:43] 2026-01-13 01:19:16,134 | INFO     | transexitcode: 0
[2026-01-13 02:28:43] 2026-01-13 01:19:16,134 | INFO     | exeerrorcode: 0
[2026-01-13 02:28:43] 2026-01-13 01:19:16,135 | INFO     | exeerrordiag: 
[2026-01-13 02:28:43] 2026-01-13 01:19:16,135 | INFO     | exitcode: 0
[2026-01-13 02:28:43] 2026-01-13 01:19:16,135 | INFO     | exitmsg: OK
[2026-01-13 02:28:43] 2026-01-13 01:19:16,135 | INFO     | cpuconsumptiontime: 42739 s
[2026-01-13 02:28:43] 2026-01-13 01:19:16,135 | INFO     | nevents: 400
[2026-01-13 02:28:43] 2026-01-13 01:19:16,135 | INFO     | neventsw: 0
[2026-01-13 02:28:43] 2026-01-13 01:19:16,135 | INFO     | pid: 597013
[2026-01-13 02:28:43] 2026-01-13 01:19:16,135 | INFO     | pgrp: 597013
[2026-01-13 02:28:43] 2026-01-13 01:19:16,135 | INFO     | corecount: 4
[2026-01-13 02:28:43] 2026-01-13 01:19:16,135 | INFO     | event service: False
[2026-01-13 02:28:43] 2026-01-13 01:19:16,135 | INFO     | sizes: {0: 2283752, 1: 2284007, 7: 2284269, 12: 2284297, 10945: 2313845, 10946: 2322865, 10947: 2323049, 10954: 2323243}
[2026-01-13 02:28:43] 2026-01-13 01:19:16,135 | INFO     | --------------------------------------------------
[2026-01-13 02:28:43] 2026-01-13 01:19:16,135 | INFO     | 
[2026-01-13 02:28:43] 2026-01-13 01:19:16,135 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/0
[2026-01-13 02:28:43] 2026-01-13 01:19:16,165 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 02:28:43] 2026-01-13 01:19:16,165 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 02:28:43] 2026-01-13 01:19:16,165 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 02:28:43] 2026-01-13 01:19:16,165 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 02:28:43] 2026-01-13 01:19:16,165 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 02:28:43] 2026-01-13 01:19:16,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 02:28:43] 2026-01-13 01:19:16,165 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 02:28:43] 2026-01-13 01:19:16,166 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 02:28:43] 2026-01-13 01:19:16,166 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 02:28:43] 2026-01-13 01:19:16,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 02:28:43] 2026-01-13 01:19:16,166 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 02:28:43] 2026-01-13 01:19:16,166 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 02:28:43] 2026-01-13 01:19:16,166 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 02:28:43] 2026-01-13 01:19:16,166 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 02:28:43] 2026-01-13 01:19:16,166 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 02:28:43] 2026-01-13 01:19:16,166 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 02:28:43] 2026-01-13 01:19:16,166 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 02:28:43] 2026-01-13 01:19:16,166 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 02:28:43] 2026-01-13 01:19:16,166 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 02:28:43] 2026-01-13 01:19:16,166 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 02:28:43] 2026-01-13 01:19:16,167 | INFO     | job 6962915511 has completed (purged errors)
[2026-01-13 02:28:43] 2026-01-13 01:19:16,167 | INFO     | overall cleanup function is called
[2026-01-13 02:28:43] 2026-01-13 01:19:17,175 | INFO     | --- collectZombieJob: --- 10, [597013]
[2026-01-13 02:28:43] 2026-01-13 01:19:17,176 | INFO     | zombie collector waiting for pid 597013
[2026-01-13 02:28:43] 2026-01-13 01:19:17,176 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 02:28:43] 2026-01-13 01:19:17,176 | INFO     | collected zombie processes
[2026-01-13 02:28:43] 2026-01-13 01:19:17,176 | INFO     | will attempt to kill all subprocesses of pid=597013
[2026-01-13 02:28:43] 2026-01-13 01:19:18,793 | INFO     | PID=589058 has CPU usage=22.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 02:28:43] 2026-01-13 01:19:18,793 | INFO     | .. there are 5 such processes running
[2026-01-13 02:28:43] 2026-01-13 01:19:18,817 | INFO     | process IDs to be killed: [597013] (in reverse order)
[2026-01-13 02:28:43] 2026-01-13 01:19:19,033 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 02:28:43] 2026-01-13 01:19:19,033 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 02:28:43] 2026-01-13 01:19:19,066 | INFO     | did not find any defunct processes belonging to 597013
[2026-01-13 02:28:43] 2026-01-13 01:19:19,095 | INFO     | did not find any defunct processes belonging to 597013
[2026-01-13 02:28:43] 2026-01-13 01:19:19,095 | INFO     | ready for new job
[2026-01-13 02:28:43] 2026-01-13 01:19:19,096 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 02:28:43] 2026-01-13 01:19:19,098 | INFO     | ***************************************
[2026-01-13 02:28:43] 2026-01-13 01:19:19,101 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 02:28:43] 2026-01-13 01:19:19,101 | INFO     | ***************************************
[2026-01-13 02:28:43] 2026-01-13 01:19:19,101 | INFO     | 
[2026-01-13 02:28:43] 2026-01-13 01:19:19,109 | INFO     | architecture information:
[2026-01-13 02:28:43] 2026-01-13 01:19:19,109 | INFO     | executing command: cat /etc/os-release
[2026-01-13 02:28:43] 2026-01-13 01:19:19,130 | INFO     | cat /etc/os-release:
[2026-01-13 02:28:43] NAME="CentOS Linux"
[2026-01-13 02:28:43] VERSION="7 (Core)"
[2026-01-13 02:28:43] ID="centos"
[2026-01-13 02:28:43] ID_LIKE="rhel fedora"
[2026-01-13 02:28:43] VERSION_ID="7"
[2026-01-13 02:28:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 02:28:43] ANSI_COLOR="0;31"
[2026-01-13 02:28:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 02:28:43] HOME_URL="https://www.centos.org/"
[2026-01-13 02:28:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 02:28:43] 
[2026-01-13 02:28:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 02:28:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 02:28:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 02:28:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 02:28:43] 
[2026-01-13 02:28:43] 2026-01-13 01:19:19,131 | INFO     | ***************************************
[2026-01-13 02:28:43] 2026-01-13 01:19:19,634 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/0
[2026-01-13 02:28:43] 2026-01-13 01:19:19,662 | INFO     | sufficient remaining disk space (3361449443328 B)
[2026-01-13 02:28:43] 2026-01-13 01:19:19,662 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 02:28:43] 2026-01-13 01:19:19,662 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 02:28:43] 2026-01-13 01:19:19,663 | INFO     | update_server=False
[2026-01-13 02:28:43] 2026-01-13 01:19:19,663 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 02:28:43] 2026-01-13 01:19:19,663 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-13 02:28:43] 2026-01-13 01:19:19,663 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 02:28:43] 2026-01-13 01:19:19,663 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 02:28:43] 2026-01-13 01:19:19,663 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 02:28:43] 2026-01-13 01:19:19,664 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 02:28:43] 2026-01-13 01:19:19,664 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 02:28:43] 2026-01-13 01:19:19,840 | INFO     | all data control threads have been joined
[2026-01-13 02:28:43] 2026-01-13 01:19:20,048 | INFO     | all payload control threads have been joined
[2026-01-13 02:28:43] 2026-01-13 01:19:20,472 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 02:28:43] 2026-01-13 01:19:20,472 | INFO     | aborting loop
[2026-01-13 02:28:43] 2026-01-13 01:19:20,668 | INFO     | [job] retrieve thread has finished
[2026-01-13 02:28:43] 2026-01-13 01:19:20,845 | INFO     | [data] control thread has finished
[2026-01-13 02:28:43] 2026-01-13 01:19:20,903 | INFO     | [payload] validate_post thread has finished
[2026-01-13 02:28:43] 2026-01-13 01:19:21,053 | INFO     | [payload] control thread has finished
[2026-01-13 02:28:43] 2026-01-13 01:19:21,145 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 02:28:43] 2026-01-13 01:19:21,204 | INFO     | [job] validate thread has finished
[2026-01-13 02:28:43] 2026-01-13 01:19:21,205 | INFO     | [payload] failed_post thread has finished
[2026-01-13 02:28:43] 2026-01-13 01:19:21,353 | INFO     | all job control threads have been joined
[2026-01-13 02:28:43] 2026-01-13 01:19:21,478 | INFO     | [job] job monitor thread has finished
[2026-01-13 02:28:43] 2026-01-13 01:19:21,503 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 02:28:43] 2026-01-13 01:19:21,532 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 02:28:43] 2026-01-13 01:19:21,670 | INFO     | [data] copytool_out thread has finished
[2026-01-13 02:28:43] 2026-01-13 01:19:21,673 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 02:28:43] 2026-01-13 01:19:21,708 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 02:28:43] 2026-01-13 01:19:22,115 | INFO     | [data] copytool_in thread has finished
[2026-01-13 02:28:43] 2026-01-13 01:19:22,150 | INFO     | [job] queue monitor thread has finished
[2026-01-13 02:28:43] 2026-01-13 01:19:22,358 | INFO     | [job] control thread has finished
[2026-01-13 02:28:43] 2026-01-13 01:19:23,670 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 02:28:43] 2026-01-13 01:19:40,159 | INFO     | [monitor] cgroup control has ended
[2026-01-13 02:28:43] 2026-01-13 01:19:41,165 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22966797305664)>', '<ExcThread(monitor, started 22966559540992)>']
[2026-01-13 02:28:43] 2026-01-13 01:19:41,755 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 02:28:43] 2026-01-13 01:19:41,755 | INFO     | [monitor] control thread has ended
[2026-01-13 02:28:43] 2026-01-13 01:19:46,183 | INFO     | all workflow threads have been joined
[2026-01-13 02:28:43] 2026-01-13 01:19:46,183 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 02:28:43] 2026-01-13 01:19:46,183 | INFO     | traces error code: 0
[2026-01-13 02:28:43] 2026-01-13 01:19:46,183 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 02:28:43] 2026-01-13 01:19:46,338 [wrapper] ==== pilot stdout END ====
[2026-01-13 02:28:43] 2026-01-13 01:19:46,342 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 02:28:43] 2026-01-13 01:19:46,346 [wrapper] pilotpid: 589058
[2026-01-13 02:28:43] 2026-01-13 01:19:46,349 [wrapper] Pilot exit status: 0
[2026-01-13 02:28:43] 2026-01-13 01:19:46,364 [wrapper] pandaids: 6962915511
[2026-01-13 02:28:43] 2026-01-13 01:19:46,529 [wrapper] cleanup supervisor_pilot  800465 589059
[2026-01-13 02:28:43] 2026-01-13 01:19:46,533 [wrapper] Test setup, not cleaning
[2026-01-13 02:28:43] 2026-01-13 01:19:46,538 [wrapper] apfmon messages muted
[2026-01-13 02:28:43] 2026-01-13 01:19:46,542 [wrapper] ==== wrapper stdout END ====
[2026-01-13 02:28:43] 2026-01-13 01:19:46,546 [wrapper] ==== wrapper stderr END ====
[2026-01-13 02:28:43]  *** Error codes and diagnostics ***
[2026-01-13 02:28:43]     "exeErrorCode": 0,
[2026-01-13 02:28:43]     "exeErrorDiag": "",
[2026-01-13 02:28:43]     "pilotErrorCode": 0,
[2026-01-13 02:28:43]     "pilotErrorDiag": "",
[2026-01-13 02:28:43]  *** Listing of results directory ***
[2026-01-13 02:28:43] total 441840
[2026-01-13 02:28:43] -rw-r--r-- 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-13 02:28:43] -rwx------ 1 boinc boinc     36322 Jan  8 09:01 runpilot2-wrapper.sh
[2026-01-13 02:28:43] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:03 queuedata.json
[2026-01-13 02:28:43] -rw-r--r-- 1 boinc boinc       100 Jan 12 23:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 02:28:43] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 23:16 run_atlas
[2026-01-13 02:28:43] -rw-r--r-- 1 boinc boinc       105 Jan 12 23:16 job.xml
[2026-01-13 02:28:43] -rw-r--r-- 2 boinc boinc 224383898 Jan 12 23:16 EVNT.47898824._000403.pool.root.1
[2026-01-13 02:28:43] -rw-r--r-- 1 boinc boinc      6689 Jan 12 23:16 init_data.xml
[2026-01-13 02:28:43] -rw-r--r-- 2 boinc boinc     15847 Jan 12 23:16 start_atlas.sh
[2026-01-13 02:28:43] drwxrwx--x 2 boinc boinc      4096 Jan 12 23:16 shared
[2026-01-13 02:28:43] -rw-r--r-- 2 boinc boinc    592406 Jan 12 23:16 input.tar.gz
[2026-01-13 02:28:43] -rw-r--r-- 1 boinc boinc         0 Jan 12 23:16 boinc_lockfile
[2026-01-13 02:28:43] -rw-r--r-- 1 boinc boinc      2518 Jan 12 23:16 pandaJob.out
[2026-01-13 02:28:43] -rw------- 1 boinc boinc    988531 Jan 12 23:16 agis_schedconf.cvmfs.json
[2026-01-13 02:28:43] drwx------ 5 boinc boinc      4096 Jan 12 23:16 pilot3
[2026-01-13 02:28:43] -rw------- 1 boinc boinc 220373148 Jan 13 02:18 HITS.47898826._018253.pool.root.1
[2026-01-13 02:28:43] -rw-r--r-- 1 boinc boinc       528 Jan 13 02:18 boinc_task_state.xml
[2026-01-13 02:28:43] -rw------- 1 boinc boinc        95 Jan 13 02:18 pilot_heartbeat.json
[2026-01-13 02:28:43] -rw------- 1 boinc boinc      1026 Jan 13 02:19 memory_monitor_summary.json
[2026-01-13 02:28:43] -rw------- 1 boinc boinc   1516240 Jan 13 02:19 agis_ddmendpoints.agis.ALL.json
[2026-01-13 02:28:43] -rw------- 1 boinc boinc    346803 Jan 13 02:19 log.47898826._018253.job.log.tgz.1
[2026-01-13 02:28:43] -rw------- 1 boinc boinc      7790 Jan 13 02:19 heartbeat.json
[2026-01-13 02:28:43] -rw------- 1 boinc boinc      4563 Jan 13 02:19 pilotlog.txt
[2026-01-13 02:28:43] -rw------- 1 boinc boinc   1536084 Jan 13 02:19 log.47898826._018253.job.log.1
[2026-01-13 02:28:43] -rw------- 1 boinc boinc       357 Jan 13 02:19 output.list
[2026-01-13 02:28:43] -rw-r--r-- 1 boinc boinc       620 Jan 13 02:19 runtime_log
[2026-01-13 02:28:43] -rw------- 1 boinc boinc   1904640 Jan 13 02:19 result.tar.gz
[2026-01-13 02:28:43] -rw-r--r-- 1 boinc boinc      9206 Jan 13 02:19 runtime_log.err
[2026-01-13 02:28:43] -rw------- 1 boinc boinc       665 Jan 13 02:19 omMMDm68zx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlLeKDm1Rn19n.diag
[2026-01-13 02:28:43] -rw-r--r-- 1 boinc boinc        26 Jan 13 02:28 wrapper_checkpoint.txt
[2026-01-13 02:28:43] -rw-r--r-- 1 boinc boinc      8192 Jan 13 02:28 boinc_mmap_file
[2026-01-13 02:28:43] -rw-r--r-- 1 boinc boinc     20903 Jan 13 02:28 stderr.txt
[2026-01-13 02:28:43] HITS file was successfully produced:
[2026-01-13 02:28:43] -rw------- 1 boinc boinc 220373148 Jan 13 02:18 shared/HITS.pool.root.1
[2026-01-13 02:28:43]  *** Contents of shared directory: ***
[2026-01-13 02:28:43] total 436804
[2026-01-13 02:28:43] -rw-r--r-- 2 boinc boinc 224383898 Jan 12 23:16 ATLAS.root_0
[2026-01-13 02:28:43] -rw-r--r-- 2 boinc boinc     15847 Jan 12 23:16 start_atlas.sh
[2026-01-13 02:28:43] -rw-r--r-- 2 boinc boinc    592406 Jan 12 23:16 input.tar.gz
[2026-01-13 02:28:43] -rw------- 1 boinc boinc 220373148 Jan 13 02:18 HITS.pool.root.1
[2026-01-13 02:28:43] -rw------- 1 boinc boinc   1904640 Jan 13 02:19 result.tar.gz
02:28:44 (585006): run_atlas exited; CPU time 43391.637500
02:28:44 (585006): called boinc_finish(0)

</stderr_txt>
]]>

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