Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:07:44 (4105015): wrapper (7.7.26015): starting
15:07:44 (4105015): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 15:07:44] Arguments: --nthreads 4
[2026-01-08 15:07:44] Threads: 4
[2026-01-08 15:07:44] Checking for CVMFS
[2026-01-08 15:07:44] No cvmfs_config command found, will try listing directly
[2026-01-08 15:07:44] CVMFS is ok
[2026-01-08 15:07:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 15:07:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 15:07:44] Further information can be found at the LHC@home message board.
[2026-01-08 15:07:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 15:07:44] Checking for apptainer binary...
[2026-01-08 15:07:44] which: no apptainer in ((null))
[2026-01-08 15:07:44] apptainer is not installed, using version from CVMFS
[2026-01-08 15:07:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 15:07:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2026-01-08 15:07:44] apptainer works
[2026-01-08 15:07:44] Set ATHENA_PROC_NUMBER=4
[2026-01-08 15:07:44] Set ATHENA_CORE_NUMBER=4
[2026-01-08 15:07:44] Starting ATLAS job with PandaID=6962915104
[2026-01-08 15:07:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 19:53:13]  *** The last 200 lines of the pilot log: ***
[2026-01-08 19:53:13] 2026-01-08 18:47:25,348 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2471.5354374999993
[2026-01-08 19:53:13] 2026-01-08 18:47:25,362 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6962915104/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 19:53:13] 2026-01-08 18:47:25,364 | INFO     | extracted standard info from prmon json
[2026-01-08 19:53:13] 2026-01-08 18:47:25,364 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 19:53:13] 2026-01-08 18:47:25,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 19:53:13] 2026-01-08 18:47:25,364 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 19:53:13] 2026-01-08 18:47:25,364 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 19:53:13] 2026-01-08 18:47:25,370 | INFO     | fitting pss+swap vs Time
[2026-01-08 19:53:13] 2026-01-08 18:47:25,371 | INFO     | sum of square deviations: 6448679050.0
[2026-01-08 19:53:13] 2026-01-08 18:47:25,373 | INFO     | sum of deviations: 10460010746.000004
[2026-01-08 19:53:13] 2026-01-08 18:47:25,374 | INFO     | mean x: 1767889660.0
[2026-01-08 19:53:13] 2026-01-08 18:47:25,374 | INFO     | mean y: 2329544.207272727
[2026-01-08 19:53:13] 2026-01-08 18:47:25,374 | INFO     | intersect: -2865256933.265551
[2026-01-08 19:53:13] 2026-01-08 18:47:25,375 | INFO     | chi2: 1.964868377230803
[2026-01-08 19:53:13] 2026-01-08 18:47:25,375 | INFO     | sum of square deviations: 6103286527.5
[2026-01-08 19:53:13] 2026-01-08 18:47:25,378 | INFO     | sum of deviations: 25849303026.000004
[2026-01-08 19:53:13] 2026-01-08 18:47:25,378 | INFO     | mean x: 1767889507.5
[2026-01-08 19:53:13] 2026-01-08 18:47:25,378 | INFO     | mean y: 2336237.014814815
[2026-01-08 19:53:13] 2026-01-08 18:47:25,378 | INFO     | intersect: -7485221718.84152
[2026-01-08 19:53:13] 2026-01-08 18:47:25,379 | INFO     | chi2: 1.3107387952407368
[2026-01-08 19:53:13] 2026-01-08 18:47:25,379 | INFO     | current chi2=1.3107387952407368 (change=33.291267220248464 %)
[2026-01-08 19:53:13] 2026-01-08 18:47:25,379 | INFO     | sum of square deviations: 5770452380.0
[2026-01-08 19:53:13] 2026-01-08 18:47:25,381 | INFO     | sum of deviations: 25355316119.999996
[2026-01-08 19:53:13] 2026-01-08 18:47:25,382 | INFO     | mean x: 1767889355.0
[2026-01-08 19:53:13] 2026-01-08 18:47:25,382 | INFO     | mean y: 2336010.6528301886
[2026-01-08 19:53:13] 2026-01-08 18:47:25,382 | INFO     | intersect: -7765753995.005946
[2026-01-08 19:53:13] 2026-01-08 18:47:25,382 | INFO     | chi2: 1.3111881545510407
[2026-01-08 19:53:13] 2026-01-08 18:47:25,382 | INFO     | current chi2=1.3111881545510407 (change=-0.03428290304181808 %)
[2026-01-08 19:53:13] 2026-01-08 18:47:25,382 | INFO     | right removable region: 264
[2026-01-08 19:53:13] 2026-01-08 18:47:25,383 | INFO     | sum of square deviations: 6103286527.5
[2026-01-08 19:53:13] 2026-01-08 18:47:25,385 | INFO     | sum of deviations: -22797680517.5
[2026-01-08 19:53:13] 2026-01-08 18:47:25,385 | INFO     | mean x: 1767889812.5
[2026-01-08 19:53:13] 2026-01-08 18:47:25,385 | INFO     | mean y: 2344077.225925926
[2026-01-08 19:53:13] 2026-01-08 18:47:25,385 | INFO     | intersect: 6605964430.607407
[2026-01-08 19:53:13] 2026-01-08 18:47:25,386 | INFO     | chi2: 0.6848930759803321
[2026-01-08 19:53:13] 2026-01-08 18:47:25,386 | INFO     | current chi2=0.6848930759803321 (change=65.14305569182251 %)
[2026-01-08 19:53:13] 2026-01-08 18:47:25,386 | INFO     | sum of square deviations: 5770452380.0
[2026-01-08 19:53:13] 2026-01-08 18:47:25,389 | INFO     | sum of deviations: -24354789545.000004
[2026-01-08 19:53:13] 2026-01-08 18:47:25,389 | INFO     | mean x: 1767889965.0
[2026-01-08 19:53:13] 2026-01-08 18:47:25,389 | INFO     | mean y: 2344795.9773584907
[2026-01-08 19:53:13] 2026-01-08 18:47:25,389 | INFO     | intersect: 7463906767.361729
[2026-01-08 19:53:13] 2026-01-08 18:47:25,389 | INFO     | chi2: 0.674669173395009
[2026-01-08 19:53:13] 2026-01-08 18:47:25,390 | INFO     | current chi2=0.674669173395009 (change=1.4927735355900615 %)
[2026-01-08 19:53:13] 2026-01-08 18:47:25,390 | INFO     | left removable region: 20
[2026-01-08 19:53:13] 2026-01-08 18:47:25,390 | INFO     | sum of square deviations: 4504437945.0
[2026-01-08 19:53:13] 2026-01-08 18:47:25,392 | INFO     | sum of deviations: -5052541367.000001
[2026-01-08 19:53:13] 2026-01-08 18:47:25,392 | INFO     | mean x: 1767889934.5
[2026-01-08 19:53:13] 2026-01-08 18:47:25,392 | INFO     | mean y: 2350182.9836065574
[2026-01-08 19:53:13] 2026-01-08 18:47:25,392 | INFO     | intersect: 1985358304.1808832
[2026-01-08 19:53:13] 2026-01-08 18:47:25,393 | INFO     | chi2: 0.00618571518484251
[2026-01-08 19:53:13] 2026-01-08 18:47:25,393 | INFO     | current memory leak: -1.12 B/s (using 244 data points, chi2=0.01)
[2026-01-08 19:53:13] 2026-01-08 18:47:25,394 | INFO     | could have reported an average CPU frequency of 2491 MHz (13 samples)
[2026-01-08 19:53:13] 2026-01-08 18:47:25,394 | INFO     | ..............................
[2026-01-08 19:53:13] 2026-01-08 18:47:25,394 | INFO     | . Timing measurements:
[2026-01-08 19:53:13] 2026-01-08 18:47:25,394 | INFO     | . get job = 0 s
[2026-01-08 19:53:13] 2026-01-08 18:47:25,394 | INFO     | . initial setup = 1 s
[2026-01-08 19:53:13] 2026-01-08 18:47:25,394 | INFO     | . payload setup = 6 s
[2026-01-08 19:53:13] 2026-01-08 18:47:25,394 | INFO     | . stage-in = 0 s
[2026-01-08 19:53:13] 2026-01-08 18:47:25,394 | INFO     | . payload execution = 16731 s
[2026-01-08 19:53:13] 2026-01-08 18:47:25,395 | INFO     | . stage-out = 1 s
[2026-01-08 19:53:13] 2026-01-08 18:47:25,395 | INFO     | . log creation = 0 s
[2026-01-08 19:53:13] 2026-01-08 18:47:25,395 | INFO     | ..............................
[2026-01-08 19:53:13] 2026-01-08 18:47:25,506 | INFO     | 
[2026-01-08 19:53:13] 2026-01-08 18:47:25,507 | INFO     | job summary report
[2026-01-08 19:53:13] 2026-01-08 18:47:25,507 | INFO     | --------------------------------------------------
[2026-01-08 19:53:13] 2026-01-08 18:47:25,507 | INFO     | PanDA job id: 6962915104
[2026-01-08 19:53:13] 2026-01-08 18:47:25,507 | INFO     | task id: 47898826
[2026-01-08 19:53:13] 2026-01-08 18:47:25,507 | INFO     | errors: (none)
[2026-01-08 19:53:13] 2026-01-08 18:47:25,507 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 19:53:13] 2026-01-08 18:47:25,507 | INFO     | pilot state: finished 
[2026-01-08 19:53:13] 2026-01-08 18:47:25,507 | INFO     | transexitcode: 0
[2026-01-08 19:53:13] 2026-01-08 18:47:25,508 | INFO     | exeerrorcode: 0
[2026-01-08 19:53:13] 2026-01-08 18:47:25,508 | INFO     | exeerrordiag: 
[2026-01-08 19:53:13] 2026-01-08 18:47:25,508 | INFO     | exitcode: 0
[2026-01-08 19:53:13] 2026-01-08 18:47:25,508 | INFO     | exitmsg: OK
[2026-01-08 19:53:13] 2026-01-08 18:47:25,508 | INFO     | cpuconsumptiontime: 64052 s
[2026-01-08 19:53:13] 2026-01-08 18:47:25,508 | INFO     | nevents: 400
[2026-01-08 19:53:13] 2026-01-08 18:47:25,508 | INFO     | neventsw: 0
[2026-01-08 19:53:13] 2026-01-08 18:47:25,508 | INFO     | pid: 4126322
[2026-01-08 19:53:13] 2026-01-08 18:47:25,508 | INFO     | pgrp: 4126322
[2026-01-08 19:53:13] 2026-01-08 18:47:25,508 | INFO     | corecount: 4
[2026-01-08 19:53:13] 2026-01-08 18:47:25,508 | INFO     | event service: False
[2026-01-08 19:53:13] 2026-01-08 18:47:25,509 | INFO     | sizes: {0: 2283979, 5: 2284241, 11: 2284297, 16741: 2315929, 16743: 2324949, 16746: 2325005, 16754: 2325327}
[2026-01-08 19:53:13] 2026-01-08 18:47:25,509 | INFO     | --------------------------------------------------
[2026-01-08 19:53:13] 2026-01-08 18:47:25,509 | INFO     | 
[2026-01-08 19:53:13] 2026-01-08 18:47:25,509 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2026-01-08 19:53:13] 2026-01-08 18:47:25,533 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 19:53:13] 2026-01-08 18:47:25,534 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 19:53:13] 2026-01-08 18:47:25,534 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 19:53:13] 2026-01-08 18:47:25,534 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 19:53:13] 2026-01-08 18:47:25,534 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 19:53:13] 2026-01-08 18:47:25,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 19:53:13] 2026-01-08 18:47:25,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 19:53:13] 2026-01-08 18:47:25,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 19:53:13] 2026-01-08 18:47:25,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 19:53:13] 2026-01-08 18:47:25,535 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 19:53:13] 2026-01-08 18:47:25,535 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 19:53:13] 2026-01-08 18:47:25,535 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 19:53:13] 2026-01-08 18:47:25,535 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 19:53:13] 2026-01-08 18:47:25,535 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 19:53:13] 2026-01-08 18:47:25,535 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 19:53:13] 2026-01-08 18:47:25,535 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 19:53:13] 2026-01-08 18:47:25,535 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 19:53:13] 2026-01-08 18:47:25,535 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 19:53:13] 2026-01-08 18:47:25,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 19:53:13] 2026-01-08 18:47:25,535 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 19:53:13] 2026-01-08 18:47:25,536 | INFO     | job 6962915104 has completed (purged errors)
[2026-01-08 19:53:13] 2026-01-08 18:47:25,536 | INFO     | overall cleanup function is called
[2026-01-08 19:53:13] 2026-01-08 18:47:26,544 | INFO     | --- collectZombieJob: --- 10, [4126322]
[2026-01-08 19:53:13] 2026-01-08 18:47:26,545 | INFO     | zombie collector waiting for pid 4126322
[2026-01-08 19:53:13] 2026-01-08 18:47:26,545 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 19:53:13] 2026-01-08 18:47:26,545 | INFO     | collected zombie processes
[2026-01-08 19:53:13] 2026-01-08 18:47:26,545 | INFO     | will attempt to kill all subprocesses of pid=4126322
[2026-01-08 19:53:13] 2026-01-08 18:47:26,550 | INFO     | PID=4112139 has CPU usage=15.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-08 19:53:13] 2026-01-08 18:47:26,550 | INFO     | .. there are 3 such processes running
[2026-01-08 19:53:13] 2026-01-08 18:47:26,964 | INFO     | process IDs to be killed: [4126322] (in reverse order)
[2026-01-08 19:53:13] 2026-01-08 18:47:27,085 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 19:53:13] 2026-01-08 18:47:27,085 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 19:53:13] 2026-01-08 18:47:27,102 | INFO     | did not find any defunct processes belonging to 4126322
[2026-01-08 19:53:13] 2026-01-08 18:47:27,119 | INFO     | did not find any defunct processes belonging to 4126322
[2026-01-08 19:53:13] 2026-01-08 18:47:27,120 | INFO     | ready for new job
[2026-01-08 19:53:13] 2026-01-08 18:47:27,120 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 19:53:13] 2026-01-08 18:47:27,123 | INFO     | ***************************************
[2026-01-08 19:53:13] 2026-01-08 18:47:27,123 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 19:53:13] 2026-01-08 18:47:27,123 | INFO     | ***************************************
[2026-01-08 19:53:13] 2026-01-08 18:47:27,123 | INFO     | 
[2026-01-08 19:53:13] 2026-01-08 18:47:27,128 | INFO     | architecture information:
[2026-01-08 19:53:13] 2026-01-08 18:47:27,128 | INFO     | executing command: cat /etc/os-release
[2026-01-08 19:53:13] 2026-01-08 18:47:27,146 | INFO     | cat /etc/os-release:
[2026-01-08 19:53:13] NAME="CentOS Linux"
[2026-01-08 19:53:13] VERSION="7 (Core)"
[2026-01-08 19:53:13] ID="centos"
[2026-01-08 19:53:13] ID_LIKE="rhel fedora"
[2026-01-08 19:53:13] VERSION_ID="7"
[2026-01-08 19:53:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 19:53:13] ANSI_COLOR="0;31"
[2026-01-08 19:53:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 19:53:13] HOME_URL="https://www.centos.org/"
[2026-01-08 19:53:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 19:53:13] 
[2026-01-08 19:53:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 19:53:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 19:53:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 19:53:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 19:53:13] 
[2026-01-08 19:53:13] 2026-01-08 18:47:27,146 | INFO     | ***************************************
[2026-01-08 19:53:13] 2026-01-08 18:47:27,649 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2026-01-08 19:53:13] 2026-01-08 18:47:27,668 | INFO     | sufficient remaining disk space (700498051072 B)
[2026-01-08 19:53:13] 2026-01-08 18:47:27,668 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 19:53:13] 2026-01-08 18:47:27,668 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 19:53:13] 2026-01-08 18:47:27,669 | INFO     | update_server=False
[2026-01-08 19:53:13] 2026-01-08 18:47:27,669 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 19:53:13] 2026-01-08 18:47:27,669 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 19:53:13] 2026-01-08 18:47:27,669 | INFO     | aborting loop
[2026-01-08 19:53:13] 2026-01-08 18:47:27,695 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 19:53:13] 2026-01-08 18:47:27,726 | INFO     | all job control threads have been joined
[2026-01-08 19:53:13] 2026-01-08 18:47:27,920 | INFO     | all data control threads have been joined
[2026-01-08 19:53:13] 2026-01-08 18:47:28,497 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 19:53:13] 2026-01-08 18:47:28,674 | INFO     | [job] retrieve thread has finished
[2026-01-08 19:53:13] 2026-01-08 18:47:28,675 | INFO     | [job] job monitor thread has finished
[2026-01-08 19:53:13] 2026-01-08 18:47:28,732 | INFO     | [job] control thread has finished
[2026-01-08 19:53:13] 2026-01-08 18:47:28,740 | INFO     | all payload control threads have been joined
[2026-01-08 19:53:13] 2026-01-08 18:47:28,860 | INFO     | [payload] validate_post thread has finished
[2026-01-08 19:53:13] 2026-01-08 18:47:28,925 | INFO     | [data] control thread has finished
[2026-01-08 19:53:13] 2026-01-08 18:47:28,989 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 19:53:13] 2026-01-08 18:47:29,123 | INFO     | [data] copytool_in thread has finished
[2026-01-08 19:53:13] 2026-01-08 18:47:29,190 | INFO     | [payload] failed_post thread has finished
[2026-01-08 19:53:13] 2026-01-08 18:47:29,207 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 19:53:13] 2026-01-08 18:47:29,701 | INFO     | [data] copytool_out thread has finished
[2026-01-08 19:53:13] 2026-01-08 18:47:29,745 | INFO     | [payload] control thread has finished
[2026-01-08 19:53:13] 2026-01-08 18:47:30,047 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 19:53:13] 2026-01-08 18:47:30,052 | INFO     | [job] validate thread has finished
[2026-01-08 19:53:13] 2026-01-08 18:47:30,517 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 19:53:13] 2026-01-08 18:47:31,523 | INFO     | [job] queue monitor thread has finished
[2026-01-08 19:53:13] 2026-01-08 18:47:32,503 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 19:53:13] 2026-01-08 18:47:37,749 | INFO     | job.realtimelogging is not enabled
[2026-01-08 19:53:13] 2026-01-08 18:47:38,755 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 19:53:13] 2026-01-08 18:47:59,185 | INFO     | PID=4112139 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 19:53:13] 2026-01-08 18:47:59,185 | INFO     | .. there are 3 such processes running
[2026-01-08 19:53:13] 2026-01-08 18:47:59,186 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 19:53:13] 2026-01-08 18:47:59,186 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 19:53:13] 2026-01-08 18:47:59,186 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 19:53:13] 2026-01-08 18:48:22,063 | INFO     | [monitor] cgroup control has ended
[2026-01-08 19:53:13] 2026-01-08 18:48:23,008 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23232474978112)>', '<ExcThread(monitor, started 23232237242112)>']
[2026-01-08 19:53:13] 2026-01-08 18:48:23,295 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 19:53:13] 2026-01-08 18:48:23,296 | INFO     | [monitor] control thread has ended
[2026-01-08 19:53:13] 2026-01-08 18:48:28,032 | INFO     | all workflow threads have been joined
[2026-01-08 19:53:13] 2026-01-08 18:48:28,033 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 19:53:13] 2026-01-08 18:48:28,033 | INFO     | traces error code: 0
[2026-01-08 19:53:13] 2026-01-08 18:48:28,033 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 19:53:13] 2026-01-08 18:48:28,221 [wrapper] ==== pilot stdout END ====
[2026-01-08 19:53:13] 2026-01-08 18:48:28,225 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 19:53:13] 2026-01-08 18:48:28,227 [wrapper] pilotpid: 4112139
[2026-01-08 19:53:13] 2026-01-08 18:48:28,230 [wrapper] Pilot exit status: 0
[2026-01-08 19:53:13] 2026-01-08 18:48:28,241 [wrapper] pandaids: 6962915104
[2026-01-08 19:53:13] 2026-01-08 18:48:28,327 [wrapper] cleanup supervisor_pilot  162575 4112140
[2026-01-08 19:53:13] 2026-01-08 18:48:28,330 [wrapper] Test setup, not cleaning
[2026-01-08 19:53:13] 2026-01-08 18:48:28,334 [wrapper] apfmon messages muted
[2026-01-08 19:53:13] 2026-01-08 18:48:28,337 [wrapper] ==== wrapper stdout END ====
[2026-01-08 19:53:13] 2026-01-08 18:48:28,340 [wrapper] ==== wrapper stderr END ====
[2026-01-08 19:53:13]  *** Error codes and diagnostics ***
[2026-01-08 19:53:13]     "exeErrorCode": 0,
[2026-01-08 19:53:13]     "exeErrorDiag": "",
[2026-01-08 19:53:13]     "pilotErrorCode": 0,
[2026-01-08 19:53:13]     "pilotErrorDiag": "",
[2026-01-08 19:53:13]  *** Listing of results directory ***
[2026-01-08 19:53:13] total 444976
[2026-01-08 19:53:13] -rw-r--r-- 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-08 19:53:13] -rwx------ 1 boinc boinc     36322 Jan  8 09:01 runpilot2-wrapper.sh
[2026-01-08 19:53:13] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:01 queuedata.json
[2026-01-08 19:53:13] -rw-r--r-- 1 boinc boinc       100 Jan  8 15:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 19:53:13] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 15:07 run_atlas
[2026-01-08 19:53:13] -rw-r--r-- 1 boinc boinc       105 Jan  8 15:07 job.xml
[2026-01-08 19:53:13] -rw-r--r-- 2 boinc boinc 225391685 Jan  8 15:07 EVNT.47898824._000395.pool.root.1
[2026-01-08 19:53:13] -rw-r--r-- 1 boinc boinc      6636 Jan  8 15:07 init_data.xml
[2026-01-08 19:53:13] -rw-r--r-- 2 boinc boinc     15847 Jan  8 15:07 start_atlas.sh
[2026-01-08 19:53:13] drwxrwx--x 2 boinc boinc      4096 Jan  8 15:07 shared
[2026-01-08 19:53:13] -rw-r--r-- 2 boinc boinc    592398 Jan  8 15:07 input.tar.gz
[2026-01-08 19:53:13] -rw-r--r-- 1 boinc boinc         0 Jan  8 15:07 boinc_lockfile
[2026-01-08 19:53:13] -rw-r--r-- 1 boinc boinc      2518 Jan  8 15:07 pandaJob.out
[2026-01-08 19:53:13] -rw------- 1 boinc boinc    989835 Jan  8 15:07 agis_schedconf.cvmfs.json
[2026-01-08 19:53:13] drwx------ 5 boinc boinc      4096 Jan  8 15:07 pilot3
[2026-01-08 19:53:13] -rw------- 1 boinc boinc 220736595 Jan  8 19:46 HITS.47898826._018069.pool.root.1
[2026-01-08 19:53:13] -rw-r--r-- 1 boinc boinc       529 Jan  8 19:47 boinc_task_state.xml
[2026-01-08 19:53:13] -rw------- 1 boinc boinc      1033 Jan  8 19:47 memory_monitor_summary.json
[2026-01-08 19:53:13] -rw------- 1 boinc boinc   1516240 Jan  8 19:47 agis_ddmendpoints.agis.ALL.json
[2026-01-08 19:53:13] -rw------- 1 boinc boinc    451774 Jan  8 19:47 log.47898826._018069.job.log.tgz.1
[2026-01-08 19:53:13] -rw------- 1 boinc boinc      7841 Jan  8 19:47 heartbeat.json
[2026-01-08 19:53:13] -rw------- 1 boinc boinc        95 Jan  8 19:47 pilot_heartbeat.json
[2026-01-08 19:53:13] -rw------- 1 boinc boinc      4905 Jan  8 19:48 pilotlog.txt
[2026-01-08 19:53:13] -rw------- 1 boinc boinc   2354418 Jan  8 19:48 log.47898826._018069.job.log.1
[2026-01-08 19:53:13] -rw------- 1 boinc boinc       357 Jan  8 19:48 output.list
[2026-01-08 19:53:13] -rw-r--r-- 1 boinc boinc       620 Jan  8 19:48 runtime_log
[2026-01-08 19:53:13] -rw------- 1 boinc boinc   2826240 Jan  8 19:48 result.tar.gz
[2026-01-08 19:53:13] -rw-r--r-- 1 boinc boinc      9206 Jan  8 19:48 runtime_log.err
[2026-01-08 19:53:13] -rw------- 1 boinc boinc       665 Jan  8 19:48 Mx9NDmU8zx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPSjKDmvEYPAo.diag
[2026-01-08 19:53:13] -rw-r--r-- 1 boinc boinc        26 Jan  8 19:53 wrapper_checkpoint.txt
[2026-01-08 19:53:13] -rw-r--r-- 1 boinc boinc      8192 Jan  8 19:53 boinc_mmap_file
[2026-01-08 19:53:13] -rw-r--r-- 1 boinc boinc     20963 Jan  8 19:53 stderr.txt
[2026-01-08 19:53:13] HITS file was successfully produced:
[2026-01-08 19:53:13] -rw------- 1 boinc boinc 220736595 Jan  8 19:46 shared/HITS.pool.root.1
[2026-01-08 19:53:13]  *** Contents of shared directory: ***
[2026-01-08 19:53:13] total 439040
[2026-01-08 19:53:13] -rw-r--r-- 2 boinc boinc 225391685 Jan  8 15:07 ATLAS.root_0
[2026-01-08 19:53:13] -rw-r--r-- 2 boinc boinc     15847 Jan  8 15:07 start_atlas.sh
[2026-01-08 19:53:13] -rw-r--r-- 2 boinc boinc    592398 Jan  8 15:07 input.tar.gz
[2026-01-08 19:53:13] -rw------- 1 boinc boinc 220736595 Jan  8 19:46 HITS.pool.root.1
[2026-01-08 19:53:13] -rw------- 1 boinc boinc   2826240 Jan  8 19:48 result.tar.gz
19:53:14 (4105015): run_atlas exited; CPU time 64819.959115
19:53:14 (4105015): called boinc_finish(0)

</stderr_txt>
]]>

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