Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:36:26 (24155): wrapper (7.7.26015): starting
17:36:26 (24155): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 17:36:26] Arguments: --nthreads 8
[2026-01-08 17:36:26] Threads: 8
[2026-01-08 17:36:26] Checking for CVMFS
[2026-01-08 17:36:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 17:36:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 17:36:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 17:36:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 17:36:29] 2.11.2.0 10929 34205 95576 154914 0 60 19787157 25165825 96 130560 0 16297935 99.826 9427580 3106 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 17:36:29] CVMFS is ok
[2026-01-08 17:36:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 17:36:29] Checking for apptainer binary...
[2026-01-08 17:36:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 17:36:29] Running /usr/bin/apptainer --version
[2026-01-08 17:36:30] apptainer version 1.3.2-1.el7
[2026-01-08 17:36:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 17:36:37] cg-vwn424.simple-grid.lan
[2026-01-08 17:36:37] apptainer works
[2026-01-08 17:36:37] Set ATHENA_PROC_NUMBER=8
[2026-01-08 17:36:37] Set ATHENA_CORE_NUMBER=8
[2026-01-08 17:36:37] Starting ATLAS job with PandaID=6962914956
[2026-01-08 17:36:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 23:52:45]  *** The last 200 lines of the pilot log: ***
[2026-01-08 23:52:45] 2026-01-08 22:51:38,855 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 23:52:45] 2026-01-08 22:51:39,031 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 23:52:45] 2026-01-08 22:51:39,033 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 23:52:45] 2026-01-08 22:51:39,035 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6962914956/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 23:52:45] 2026-01-08 22:51:39,035 | INFO     | extracted standard info from prmon json
[2026-01-08 23:52:45] 2026-01-08 22:51:39,036 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 23:52:45] 2026-01-08 22:51:39,036 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 23:52:45] 2026-01-08 22:51:39,036 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 23:52:45] 2026-01-08 22:51:39,036 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 23:52:45] 2026-01-08 22:51:39,050 | INFO     | fitting pss+swap vs Time
[2026-01-08 23:52:45] 2026-01-08 22:51:39,051 | INFO     | sum of square deviations: 13755764892.5
[2026-01-08 23:52:45] 2026-01-08 22:51:39,055 | INFO     | sum of deviations: 204964634993.5
[2026-01-08 23:52:45] 2026-01-08 22:51:39,055 | INFO     | mean x: 1767901769.5
[2026-01-08 23:52:45] 2026-01-08 22:51:39,055 | INFO     | mean y: 2431516.872881356
[2026-01-08 23:52:45] 2026-01-08 22:51:39,056 | INFO     | intersect: -26339785271.631325
[2026-01-08 23:52:45] 2026-01-08 22:51:39,056 | INFO     | chi2: 8.452196820115434
[2026-01-08 23:52:45] 2026-01-08 22:51:39,057 | INFO     | sum of square deviations: 13181084350.0
[2026-01-08 23:52:45] 2026-01-08 22:51:39,061 | INFO     | sum of deviations: 225218442636.99997
[2026-01-08 23:52:45] 2026-01-08 22:51:39,061 | INFO     | mean x: 1767901617.0
[2026-01-08 23:52:45] 2026-01-08 22:51:39,061 | INFO     | mean y: 2436820.3209169055
[2026-01-08 23:52:45] 2026-01-08 22:51:39,062 | INFO     | intersect: -30204793354.6513
[2026-01-08 23:52:45] 2026-01-08 22:51:39,062 | INFO     | chi2: 7.729422035994807
[2026-01-08 23:52:45] 2026-01-08 22:51:39,062 | INFO     | current chi2=7.729422035994807 (change=8.55132457872362 %)
[2026-01-08 23:52:45] 2026-01-08 22:51:39,062 | INFO     | right removable region: 348
[2026-01-08 23:52:45] 2026-01-08 22:51:39,063 | INFO     | sum of square deviations: 13181084350.0
[2026-01-08 23:52:45] 2026-01-08 22:51:39,086 | INFO     | sum of deviations: 81643082040.99998
[2026-01-08 23:52:45] 2026-01-08 22:51:39,087 | INFO     | mean x: 1767901922.0
[2026-01-08 23:52:45] 2026-01-08 22:51:39,087 | INFO     | mean y: 2464227.369627507
[2026-01-08 23:52:45] 2026-01-08 22:51:39,087 | INFO     | intersect: -10947845915.990282
[2026-01-08 23:52:45] 2026-01-08 22:51:39,088 | INFO     | chi2: 3.584322201980323
[2026-01-08 23:52:45] 2026-01-08 22:51:39,088 | INFO     | current chi2=3.584322201980323 (change=57.59301068983661 %)
[2026-01-08 23:52:45] 2026-01-08 22:51:39,088 | INFO     | sum of square deviations: 12622636670.0
[2026-01-08 23:52:45] 2026-01-08 22:51:39,092 | INFO     | sum of deviations: -11936168442.5
[2026-01-08 23:52:45] 2026-01-08 22:51:39,093 | INFO     | mean x: 1767902074.5
[2026-01-08 23:52:45] 2026-01-08 22:51:39,093 | INFO     | mean y: 2489754.927325581
[2026-01-08 23:52:45] 2026-01-08 22:51:39,093 | INFO     | intersect: 1674246417.4025977
[2026-01-08 23:52:45] 2026-01-08 22:51:39,093 | INFO     | chi2: 0.9224682118248819
[2026-01-08 23:52:45] 2026-01-08 22:51:39,094 | INFO     | current chi2=0.9224682118248819 (change=74.2638033122351 %)
[2026-01-08 23:52:45] 2026-01-08 22:51:39,094 | INFO     | sum of square deviations: 12080189290.0
[2026-01-08 23:52:45] 2026-01-08 22:51:39,098 | INFO     | sum of deviations: -25065853918.0
[2026-01-08 23:52:45] 2026-01-08 22:51:39,098 | INFO     | mean x: 1767902227.0
[2026-01-08 23:52:45] 2026-01-08 22:51:39,098 | INFO     | mean y: 2493426.067846608
[2026-01-08 23:52:45] 2026-01-08 22:51:39,098 | INFO     | intersect: 3670811686.6080236
[2026-01-08 23:52:45] 2026-01-08 22:51:39,099 | INFO     | chi2: 0.8460434139254324
[2026-01-08 23:52:45] 2026-01-08 22:51:39,099 | INFO     | current chi2=0.8460434139254324 (change=8.28481642183219 %)
[2026-01-08 23:52:45] 2026-01-08 22:51:39,099 | INFO     | left removable region: 30
[2026-01-08 23:52:45] 2026-01-08 22:51:39,100 | INFO     | sum of square deviations: 9971385099.5
[2026-01-08 23:52:45] 2026-01-08 22:51:39,103 | INFO     | sum of deviations: 10578450968.999996
[2026-01-08 23:52:45] 2026-01-08 22:51:39,104 | INFO     | mean x: 1767902501.5
[2026-01-08 23:52:45] 2026-01-08 22:51:39,104 | INFO     | mean y: 2495960.1949685533
[2026-01-08 23:52:45] 2026-01-08 22:51:39,104 | INFO     | intersect: -1873037854.1622725
[2026-01-08 23:52:45] 2026-01-08 22:51:39,104 | INFO     | chi2: 0.0008097611172976396
[2026-01-08 23:52:45] 2026-01-08 22:51:39,105 | INFO     | current memory leak: 1.06 B/s (using 318 data points, chi2=0.00)
[2026-01-08 23:52:45] 2026-01-08 22:51:39,105 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-08 23:52:45] 2026-01-08 22:51:39,105 | INFO     | ..............................
[2026-01-08 23:52:45] 2026-01-08 22:51:39,106 | INFO     | . Timing measurements:
[2026-01-08 23:52:45] 2026-01-08 22:51:39,106 | INFO     | . get job = 0 s
[2026-01-08 23:52:45] 2026-01-08 22:51:39,106 | INFO     | . initial setup = 11 s
[2026-01-08 23:52:45] 2026-01-08 22:51:39,106 | INFO     | . payload setup = 150 s
[2026-01-08 23:52:45] 2026-01-08 22:51:39,106 | INFO     | . stage-in = 0 s
[2026-01-08 23:52:45] 2026-01-08 22:51:39,106 | INFO     | . payload execution = 21755 s
[2026-01-08 23:52:45] 2026-01-08 22:51:39,106 | INFO     | . stage-out = 3 s
[2026-01-08 23:52:45] 2026-01-08 22:51:39,106 | INFO     | . log creation = 1 s
[2026-01-08 23:52:45] 2026-01-08 22:51:39,106 | INFO     | ..............................
[2026-01-08 23:52:45] 2026-01-08 22:51:39,582 | INFO     | 
[2026-01-08 23:52:45] 2026-01-08 22:51:39,583 | INFO     | job summary report
[2026-01-08 23:52:45] 2026-01-08 22:51:39,583 | INFO     | --------------------------------------------------
[2026-01-08 23:52:45] 2026-01-08 22:51:39,583 | INFO     | PanDA job id: 6962914956
[2026-01-08 23:52:45] 2026-01-08 22:51:39,583 | INFO     | task id: 47898826
[2026-01-08 23:52:45] 2026-01-08 22:51:39,583 | INFO     | errors: (none)
[2026-01-08 23:52:45] 2026-01-08 22:51:39,583 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 23:52:45] 2026-01-08 22:51:39,583 | INFO     | pilot state: finished 
[2026-01-08 23:52:45] 2026-01-08 22:51:39,583 | INFO     | transexitcode: 0
[2026-01-08 23:52:45] 2026-01-08 22:51:39,583 | INFO     | exeerrorcode: 0
[2026-01-08 23:52:45] 2026-01-08 22:51:39,584 | INFO     | exeerrordiag: 
[2026-01-08 23:52:45] 2026-01-08 22:51:39,584 | INFO     | exitcode: 0
[2026-01-08 23:52:45] 2026-01-08 22:51:39,584 | INFO     | exitmsg: OK
[2026-01-08 23:52:45] 2026-01-08 22:51:39,584 | INFO     | cpuconsumptiontime: 81119 s
[2026-01-08 23:52:45] 2026-01-08 22:51:39,584 | INFO     | nevents: 400
[2026-01-08 23:52:45] 2026-01-08 22:51:39,584 | INFO     | neventsw: 0
[2026-01-08 23:52:45] 2026-01-08 22:51:39,584 | INFO     | pid: 1935
[2026-01-08 23:52:45] 2026-01-08 22:51:39,584 | INFO     | pgrp: 1935
[2026-01-08 23:52:45] 2026-01-08 22:51:39,584 | INFO     | corecount: 8
[2026-01-08 23:52:45] 2026-01-08 22:51:39,584 | INFO     | event service: False
[2026-01-08 23:52:45] 2026-01-08 22:51:39,585 | INFO     | sizes: {0: 2283140, 1: 2283825, 2: 2284024, 13: 2284024, 24: 2284080, 34: 2284108, 45: 2284264, 56: 2284292, 67: 2284320, 77: 2284348, 88: 2284404, 99: 2284712, 10
[2026-01-08 23:52:45] 2026-01-08 22:51:39,585 | INFO     | --------------------------------------------------
[2026-01-08 23:52:45] 2026-01-08 22:51:39,585 | INFO     | 
[2026-01-08 23:52:45] 2026-01-08 22:51:39,585 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-08 23:52:45] 2026-01-08 22:51:40,081 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 23:52:45] 2026-01-08 22:51:40,081 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 23:52:45] 2026-01-08 22:51:40,081 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 23:52:45] 2026-01-08 22:51:40,081 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 23:52:45] 2026-01-08 22:51:40,081 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 23:52:45] 2026-01-08 22:51:40,082 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 23:52:45] 2026-01-08 22:51:40,082 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 23:52:45] 2026-01-08 22:51:40,082 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 23:52:45] 2026-01-08 22:51:40,082 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 23:52:45] 2026-01-08 22:51:40,082 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 23:52:45] 2026-01-08 22:51:40,082 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 23:52:45] 2026-01-08 22:51:40,082 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 23:52:45] 2026-01-08 22:51:40,082 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 23:52:45] 2026-01-08 22:51:40,083 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 23:52:45] 2026-01-08 22:51:40,083 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 23:52:45] 2026-01-08 22:51:40,083 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 23:52:45] 2026-01-08 22:51:40,083 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 23:52:45] 2026-01-08 22:51:40,083 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 23:52:45] 2026-01-08 22:51:40,083 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 23:52:45] 2026-01-08 22:51:40,083 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 23:52:45] 2026-01-08 22:51:40,083 | INFO     | job 6962914956 has completed (purged errors)
[2026-01-08 23:52:45] 2026-01-08 22:51:40,084 | INFO     | overall cleanup function is called
[2026-01-08 23:52:45] 2026-01-08 22:51:41,096 | INFO     | --- collectZombieJob: --- 10, [1935]
[2026-01-08 23:52:45] 2026-01-08 22:51:41,097 | INFO     | zombie collector waiting for pid 1935
[2026-01-08 23:52:45] 2026-01-08 22:51:41,097 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 23:52:45] 2026-01-08 22:51:41,097 | INFO     | collected zombie processes
[2026-01-08 23:52:45] 2026-01-08 22:51:41,097 | INFO     | will attempt to kill all subprocesses of pid=1935
[2026-01-08 23:52:45] 2026-01-08 22:51:41,219 | INFO     | process IDs to be killed: [1935] (in reverse order)
[2026-01-08 23:52:45] 2026-01-08 22:51:42,201 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 23:52:45] 2026-01-08 22:51:42,201 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 23:52:45] 2026-01-08 22:51:42,204 | INFO     | did not find any defunct processes belonging to 1935
[2026-01-08 23:52:45] 2026-01-08 22:51:42,206 | INFO     | did not find any defunct processes belonging to 1935
[2026-01-08 23:52:45] 2026-01-08 22:51:42,206 | INFO     | ready for new job
[2026-01-08 23:52:45] 2026-01-08 22:51:42,206 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 23:52:45] 2026-01-08 22:51:42,209 | INFO     | ***************************************
[2026-01-08 23:52:45] 2026-01-08 22:51:42,209 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 23:52:45] 2026-01-08 22:51:42,209 | INFO     | ***************************************
[2026-01-08 23:52:45] 2026-01-08 22:51:42,209 | INFO     | 
[2026-01-08 23:52:45] 2026-01-08 22:51:42,210 | INFO     | pilot is running in a VM
[2026-01-08 23:52:45] 2026-01-08 22:51:42,210 | INFO     | architecture information:
[2026-01-08 23:52:45] 2026-01-08 22:51:42,227 | INFO     | executing command: cat /etc/os-release
[2026-01-08 23:52:45] 2026-01-08 22:51:42,496 | INFO     | cat /etc/os-release:
[2026-01-08 23:52:45] NAME="CentOS Linux"
[2026-01-08 23:52:45] VERSION="7 (Core)"
[2026-01-08 23:52:45] ID="centos"
[2026-01-08 23:52:45] ID_LIKE="rhel fedora"
[2026-01-08 23:52:45] VERSION_ID="7"
[2026-01-08 23:52:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 23:52:45] ANSI_COLOR="0;31"
[2026-01-08 23:52:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 23:52:45] HOME_URL="https://www.centos.org/"
[2026-01-08 23:52:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 23:52:45] 
[2026-01-08 23:52:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 23:52:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 23:52:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 23:52:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 23:52:45] 
[2026-01-08 23:52:45] 2026-01-08 22:51:42,496 | INFO     | ***************************************
[2026-01-08 23:52:45] 2026-01-08 22:51:42,999 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-08 23:52:45] 2026-01-08 22:51:43,291 | INFO     | sufficient remaining disk space (497127784448 B)
[2026-01-08 23:52:45] 2026-01-08 22:51:43,291 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 23:52:45] 2026-01-08 22:51:43,291 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 23:52:45] 2026-01-08 22:51:43,292 | INFO     | update_server=False
[2026-01-08 23:52:45] 2026-01-08 22:51:43,292 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 23:52:45] 2026-01-08 22:51:43,292 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:52:45] 2026-01-08 22:51:43,292 | INFO     | aborting loop
[2026-01-08 23:52:45] 2026-01-08 22:51:43,299 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 23:52:45] 2026-01-08 22:51:43,347 | INFO     | all payload control threads have been joined
[2026-01-08 23:52:45] 2026-01-08 22:51:43,560 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 23:52:45] 2026-01-08 22:51:43,758 | INFO     | all job control threads have been joined
[2026-01-08 23:52:45] 2026-01-08 22:51:44,291 | INFO     | all data control threads have been joined
[2026-01-08 23:52:45] 2026-01-08 22:51:44,294 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:52:45] 2026-01-08 22:51:44,297 | INFO     | [job] job monitor thread has finished
[2026-01-08 23:52:45] 2026-01-08 22:51:44,300 | INFO     | [job] retrieve thread has finished
[2026-01-08 23:52:45] 2026-01-08 22:51:44,353 | INFO     | [payload] control thread has finished
[2026-01-08 23:52:45] 2026-01-08 22:51:44,404 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 23:52:45] 2026-01-08 22:51:44,764 | INFO     | [job] control thread has finished
[2026-01-08 23:52:45] 2026-01-08 22:51:44,846 | INFO     | [payload] failed_post thread has finished
[2026-01-08 23:52:45] 2026-01-08 22:51:44,916 | INFO     | [job] validate thread has finished
[2026-01-08 23:52:45] 2026-01-08 22:51:44,957 | INFO     | [data] copytool_in thread has finished
[2026-01-08 23:52:45] 2026-01-08 22:51:45,145 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 23:52:45] 2026-01-08 22:51:45,297 | INFO     | [data] control thread has finished
[2026-01-08 23:52:45] 2026-01-08 22:51:45,300 | INFO     | [job] queue monitor thread has finished
[2026-01-08 23:52:45] 2026-01-08 22:51:45,470 | INFO     | [payload] validate_post thread has finished
[2026-01-08 23:52:45] 2026-01-08 22:51:45,474 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 23:52:45] 2026-01-08 22:51:45,567 | INFO     | [data] copytool_out thread has finished
[2026-01-08 23:52:45] 2026-01-08 22:51:45,678 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 23:52:45] 2026-01-08 22:51:47,311 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 23:52:45] 2026-01-08 22:52:11,889 | INFO     | PID=27883 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 23:52:45] 2026-01-08 22:52:11,889 | INFO     | .. there are 2 such processes running
[2026-01-08 23:52:45] 2026-01-08 22:52:11,889 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 23:52:45] 2026-01-08 22:52:11,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 23:52:45] 2026-01-08 22:52:11,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 23:52:45] 2026-01-08 22:52:34,042 | INFO     | [monitor] cgroup control has ended
[2026-01-08 23:52:45] 2026-01-08 22:52:35,876 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140120157124416)>', '<ExcThread(monitor, started 140119717689088)>']
[2026-01-08 23:52:45] 2026-01-08 22:52:36,031 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 23:52:45] 2026-01-08 22:52:36,032 | INFO     | [monitor] control thread has ended
[2026-01-08 23:52:45] 2026-01-08 22:52:40,902 | INFO     | all workflow threads have been joined
[2026-01-08 23:52:45] 2026-01-08 22:52:40,903 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 23:52:45] 2026-01-08 22:52:40,903 | INFO     | traces error code: 0
[2026-01-08 23:52:45] 2026-01-08 22:52:40,903 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 23:52:45] 2026-01-08 22:52:41,247 [wrapper] ==== pilot stdout END ====
[2026-01-08 23:52:45] 2026-01-08 22:52:41,346 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 23:52:45] 2026-01-08 22:52:41,477 [wrapper] pilotpid: 27883
[2026-01-08 23:52:45] 2026-01-08 22:52:41,600 [wrapper] Pilot exit status: 0
[2026-01-08 23:52:45] 2026-01-08 22:52:41,937 [wrapper] pandaids: 6962914956
[2026-01-08 23:52:45] 2026-01-08 22:52:43,117 [wrapper] cleanup supervisor_pilot  1293 27884
[2026-01-08 23:52:45] 2026-01-08 22:52:43,217 [wrapper] Test setup, not cleaning
[2026-01-08 23:52:45] 2026-01-08 22:52:43,318 [wrapper] apfmon messages muted
[2026-01-08 23:52:45] 2026-01-08 22:52:43,416 [wrapper] ==== wrapper stdout END ====
[2026-01-08 23:52:45] 2026-01-08 22:52:43,511 [wrapper] ==== wrapper stderr END ====
[2026-01-08 23:52:45]  *** Error codes and diagnostics ***
[2026-01-08 23:52:45]     "exeErrorCode": 0,
[2026-01-08 23:52:45]     "exeErrorDiag": "",
[2026-01-08 23:52:45]     "pilotErrorCode": 0,
[2026-01-08 23:52:45]     "pilotErrorDiag": "",
[2026-01-08 23:52:45]  *** Listing of results directory ***
[2026-01-08 23:52:45] total 443448
[2026-01-08 23:52:45] -rw-r--r--. 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-08 23:52:45] -rwx------. 1 boinc boinc     36322 Jan  8 09:01 runpilot2-wrapper.sh
[2026-01-08 23:52:45] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:01 queuedata.json
[2026-01-08 23:52:45] -rw-r--r--. 1 boinc boinc       100 Jan  8 17:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 23:52:45] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 17:36 run_atlas
[2026-01-08 23:52:45] -rw-r--r--. 1 boinc boinc       105 Jan  8 17:36 job.xml
[2026-01-08 23:52:45] -rw-r--r--. 1 boinc boinc      6389 Jan  8 17:36 init_data.xml
[2026-01-08 23:52:45] -rw-r--r--. 2 boinc boinc 225119069 Jan  8 17:36 EVNT.47898824._000389.pool.root.1
[2026-01-08 23:52:45] -rw-r--r--. 2 boinc boinc     15847 Jan  8 17:36 start_atlas.sh
[2026-01-08 23:52:45] drwxrwx--x. 2 boinc boinc        68 Jan  8 17:36 shared
[2026-01-08 23:52:45] -rw-r--r--. 2 boinc boinc    592400 Jan  8 17:36 input.tar.gz
[2026-01-08 23:52:45] -rw-r--r--. 1 boinc boinc         0 Jan  8 17:36 boinc_lockfile
[2026-01-08 23:52:45] -rw-r--r--. 1 boinc boinc      2518 Jan  8 17:36 pandaJob.out
[2026-01-08 23:52:45] -rw-------. 1 boinc boinc    989837 Jan  8 17:40 agis_schedconf.cvmfs.json
[2026-01-08 23:52:45] drwx------. 5 boinc boinc      4096 Jan  8 17:40 pilot3
[2026-01-08 23:52:45] -rw-------. 1 boinc boinc 217987461 Jan  8 23:48 HITS.47898826._017921.pool.root.1
[2026-01-08 23:52:45] -rw-r--r--. 1 boinc boinc       531 Jan  8 23:48 boinc_task_state.xml
[2026-01-08 23:52:45] -rw-------. 1 boinc boinc      1016 Jan  8 23:49 memory_monitor_summary.json
[2026-01-08 23:52:45] -rw-------. 1 boinc boinc   1516240 Jan  8 23:49 agis_ddmendpoints.agis.ALL.json
[2026-01-08 23:52:45] -rw-------. 1 boinc boinc    575506 Jan  8 23:49 log.47898826._017921.job.log.tgz.1
[2026-01-08 23:52:45] -rw-------. 1 boinc boinc        95 Jan  8 23:51 pilot_heartbeat.json
[2026-01-08 23:52:45] -rw-------. 1 boinc boinc      7778 Jan  8 23:51 heartbeat.json
[2026-01-08 23:52:45] -rw-r--r--. 1 boinc boinc        28 Jan  8 23:52 wrapper_checkpoint.txt
[2026-01-08 23:52:45] -rw-r--r--. 1 boinc boinc      8192 Jan  8 23:52 boinc_mmap_file
[2026-01-08 23:52:45] -rw-------. 1 boinc boinc      4884 Jan  8 23:52 pilotlog.txt
[2026-01-08 23:52:45] -rw-------. 1 boinc boinc   2968040 Jan  8 23:52 log.47898826._017921.job.log.1
[2026-01-08 23:52:45] -rw-------. 1 boinc boinc       357 Jan  8 23:52 output.list
[2026-01-08 23:52:45] -rw-r--r--. 1 boinc boinc       620 Jan  8 23:52 runtime_log
[2026-01-08 23:52:45] -rw-------. 1 boinc boinc   3563520 Jan  8 23:52 result.tar.gz
[2026-01-08 23:52:45] -rw-r--r--. 1 boinc boinc      8817 Jan  8 23:52 runtime_log.err
[2026-01-08 23:52:45] -rw-------. 1 boinc boinc       657 Jan  8 23:52 RMnKDmT8zx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNJeKDm9uMVtm.diag
[2026-01-08 23:52:45] -rw-r--r--. 1 boinc boinc     20780 Jan  8 23:52 stderr.txt
[2026-01-08 23:52:45] HITS file was successfully produced:
[2026-01-08 23:52:45] -rw-------. 1 boinc boinc 217987461 Jan  8 23:48 shared/HITS.pool.root.1
[2026-01-08 23:52:45]  *** Contents of shared directory: ***
[2026-01-08 23:52:45] total 436800
[2026-01-08 23:52:45] -rw-r--r--. 2 boinc boinc 225119069 Jan  8 17:36 ATLAS.root_0
[2026-01-08 23:52:45] -rw-r--r--. 2 boinc boinc     15847 Jan  8 17:36 start_atlas.sh
[2026-01-08 23:52:45] -rw-r--r--. 2 boinc boinc    592400 Jan  8 17:36 input.tar.gz
[2026-01-08 23:52:45] -rw-------. 1 boinc boinc 217987461 Jan  8 23:48 HITS.pool.root.1
[2026-01-08 23:52:45] -rw-------. 1 boinc boinc   3563520 Jan  8 23:52 result.tar.gz
23:52:47 (24155): run_atlas exited; CPU time 81345.555808
23:52:47 (24155): called boinc_finish(0)

</stderr_txt>
]]>

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