Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:20:42 (879287): wrapper (7.7.26015): starting
03:20:42 (879287): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 03:20:42] Arguments: --nthreads 8
[2026-01-08 03:20:42] Threads: 8
[2026-01-08 03:20:42] Checking for CVMFS
[2026-01-08 03:20:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 03:20:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 03:20:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 03:20:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 03:20:45] 2.13.3.0 3539256 15221 214540 154897 0 106 39390962 40960000 14490 16776704 0 28536987 99.510 43227109 34677 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 03:20:45] CVMFS is ok
[2026-01-08 03:20:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 03:20:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 03:20:45] Further information can be found at the LHC@home message board.
[2026-01-08 03:20:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 03:20:45] Checking for apptainer binary...
[2026-01-08 03:20:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 03:20:45] Running /usr/bin/apptainer --version
[2026-01-08 03:20:45] apptainer version 1.4.5-2.el9
[2026-01-08 03:20:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 03:20:46] c-210-31-1.aglt2.org
[2026-01-08 03:20:46] apptainer works
[2026-01-08 03:20:46] Set ATHENA_PROC_NUMBER=8
[2026-01-08 03:20:46] Set ATHENA_CORE_NUMBER=8
[2026-01-08 03:20:46] Starting ATLAS job with PandaID=6962914532
[2026-01-08 03:20:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 14:50:21]  *** The last 200 lines of the pilot log: ***
[2026-01-08 14:50:21] 2026-01-08 19:49:02,110 | INFO     | time since job start (41228s) is within the limit (174528.0s)
[2026-01-08 14:50:21] 2026-01-08 19:49:02,293 | INFO     | monitor loop #2343: job 0:6962914532 is in state 'finished'
[2026-01-08 14:50:21] 2026-01-08 19:49:02,293 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 14:50:21] 2026-01-08 19:49:04,117 | INFO     | time since job start (41230s) is within the limit (174528.0s)
[2026-01-08 14:50:21] 2026-01-08 19:49:04,504 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-08 14:50:21] 2026-01-08 19:49:04,548 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2921.5922500000006
[2026-01-08 14:50:21] 2026-01-08 19:49:04,613 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6962914532/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 14:50:21] 2026-01-08 19:49:04,614 | INFO     | extracted standard info from prmon json
[2026-01-08 14:50:21] 2026-01-08 19:49:04,614 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 14:50:21] 2026-01-08 19:49:04,614 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 14:50:21] 2026-01-08 19:49:04,647 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 14:50:21] 2026-01-08 19:49:04,647 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 14:50:21] 2026-01-08 19:49:04,707 | INFO     | fitting pss+swap vs Time
[2026-01-08 14:50:21] 2026-01-08 19:49:04,708 | INFO     | sum of square deviations: 94517109740.1545
[2026-01-08 14:50:21] 2026-01-08 19:49:04,723 | INFO     | sum of deviations: 219080669824.56308
[2026-01-08 14:50:21] 2026-01-08 19:49:04,724 | INFO     | mean x: 1767881153.421991
[2026-01-08 14:50:21] 2026-01-08 19:49:04,724 | INFO     | mean y: 2509864.191679049
[2026-01-08 14:50:21] 2026-01-08 19:49:04,724 | INFO     | intersect: -4095251782.632858
[2026-01-08 14:50:21] 2026-01-08 19:49:04,729 | INFO     | chi2: 4.167630537386778
[2026-01-08 14:50:21] 2026-01-08 19:49:04,730 | INFO     | sum of square deviations: 92426042609.95218
[2026-01-08 14:50:21] 2026-01-08 19:49:04,743 | INFO     | sum of deviations: 258237754871.4726
[2026-01-08 14:50:21] 2026-01-08 19:49:04,744 | INFO     | mean x: 1767881000.9221556
[2026-01-08 14:50:21] 2026-01-08 19:49:04,744 | INFO     | mean y: 2512701.393712575
[2026-01-08 14:50:21] 2026-01-08 19:49:04,744 | INFO     | intersect: -4936935182.193494
[2026-01-08 14:50:21] 2026-01-08 19:49:04,750 | INFO     | chi2: 3.4880750598475982
[2026-01-08 14:50:21] 2026-01-08 19:49:04,750 | INFO     | current chi2=3.4880750598475982 (change=16.30555951260689 %)
[2026-01-08 14:50:21] 2026-01-08 19:49:04,750 | INFO     | right removable region: 667
[2026-01-08 14:50:21] 2026-01-08 19:49:04,751 | INFO     | sum of square deviations: 92425951354.2575
[2026-01-08 14:50:21] 2026-01-08 19:49:04,771 | INFO     | sum of deviations: 27628474274.08982
[2026-01-08 14:50:21] 2026-01-08 19:49:04,771 | INFO     | mean x: 1767881305.9251497
[2026-01-08 14:50:21] 2026-01-08 19:49:04,771 | INFO     | mean y: 2523813.6017964073
[2026-01-08 14:50:21] 2026-01-08 19:49:04,771 | INFO     | intersect: -525941000.2813163
[2026-01-08 14:50:21] 2026-01-08 19:49:04,772 | INFO     | chi2: 1.2161787195292137
[2026-01-08 14:50:21] 2026-01-08 19:49:04,772 | INFO     | current chi2=1.2161787195292137 (change=70.81846126667955 %)
[2026-01-08 14:50:21] 2026-01-08 19:49:04,773 | INFO     | sum of square deviations: 90365904066.202
[2026-01-08 14:50:21] 2026-01-08 19:49:04,789 | INFO     | sum of deviations: -31867914632.006035
[2026-01-08 14:50:21] 2026-01-08 19:49:04,789 | INFO     | mean x: 1767881458.4268477
[2026-01-08 14:50:21] 2026-01-08 19:49:04,790 | INFO     | mean y: 2528213.494720965
[2026-01-08 14:50:21] 2026-01-08 19:49:04,790 | INFO     | intersect: 625979015.8612796
[2026-01-08 14:50:21] 2026-01-08 19:49:04,790 | INFO     | chi2: 0.9288574961536922
[2026-01-08 14:50:21] 2026-01-08 19:49:04,791 | INFO     | current chi2=0.9288574961536922 (change=23.624917848155118 %)
[2026-01-08 14:50:21] 2026-01-08 19:49:04,791 | INFO     | left removable region: 20
[2026-01-08 14:50:21] 2026-01-08 19:49:04,791 | INFO     | sum of square deviations: 83980274975.32535
[2026-01-08 14:50:21] 2026-01-08 19:49:04,805 | INFO     | monitor loop #2344: job 0:6962914532 is in state 'finished'
[2026-01-08 14:50:21] 2026-01-08 19:49:04,805 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 14:50:21] 2026-01-08 19:49:04,812 | INFO     | sum of deviations: -34620696385.55488
[2026-01-08 14:50:21] 2026-01-08 19:49:04,812 | INFO     | mean x: 1767881580.4173107
[2026-01-08 14:50:21] 2026-01-08 19:49:04,812 | INFO     | mean y: 2534509.5316846985
[2026-01-08 14:50:21] 2026-01-08 19:49:04,812 | INFO     | intersect: 731340070.8283781
[2026-01-08 14:50:21] 2026-01-08 19:49:04,813 | INFO     | chi2: 0.13986882534294892
[2026-01-08 14:50:21] 2026-01-08 19:49:04,813 | INFO     | current memory leak: -0.41 B/s (using 647 data points, chi2=0.14)
[2026-01-08 14:50:21] 2026-01-08 19:49:04,814 | INFO     | could have reported an average CPU frequency of 2892 MHz (26 samples)
[2026-01-08 14:50:21] 2026-01-08 19:49:04,819 | INFO     | ..............................
[2026-01-08 14:50:21] 2026-01-08 19:49:04,819 | INFO     | . Timing measurements:
[2026-01-08 14:50:21] 2026-01-08 19:49:04,819 | INFO     | . get job = 0 s
[2026-01-08 14:50:21] 2026-01-08 19:49:04,819 | INFO     | . initial setup = 7 s
[2026-01-08 14:50:21] 2026-01-08 19:49:04,819 | INFO     | . payload setup = 37 s
[2026-01-08 14:50:21] 2026-01-08 19:49:04,819 | INFO     | . stage-in = 0 s
[2026-01-08 14:50:21] 2026-01-08 19:49:04,819 | INFO     | . payload execution = 41057 s
[2026-01-08 14:50:21] 2026-01-08 19:49:04,819 | INFO     | . stage-out = 4 s
[2026-01-08 14:50:21] 2026-01-08 19:49:04,819 | INFO     | . log creation = 1 s
[2026-01-08 14:50:21] 2026-01-08 19:49:04,819 | INFO     | ..............................
[2026-01-08 14:50:21] 2026-01-08 19:49:05,793 | INFO     | 
[2026-01-08 14:50:21] 2026-01-08 19:49:05,794 | INFO     | job summary report
[2026-01-08 14:50:21] 2026-01-08 19:49:05,794 | INFO     | --------------------------------------------------
[2026-01-08 14:50:21] 2026-01-08 19:49:05,794 | INFO     | PanDA job id: 6962914532
[2026-01-08 14:50:21] 2026-01-08 19:49:05,794 | INFO     | task id: 47898826
[2026-01-08 14:50:21] 2026-01-08 19:49:05,794 | INFO     | errors: (none)
[2026-01-08 14:50:21] 2026-01-08 19:49:05,794 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 14:50:21] 2026-01-08 19:49:05,794 | INFO     | pilot state: finished 
[2026-01-08 14:50:21] 2026-01-08 19:49:05,794 | INFO     | transexitcode: 0
[2026-01-08 14:50:21] 2026-01-08 19:49:05,794 | INFO     | exeerrorcode: 0
[2026-01-08 14:50:21] 2026-01-08 19:49:05,794 | INFO     | exeerrordiag: 
[2026-01-08 14:50:21] 2026-01-08 19:49:05,794 | INFO     | exitcode: 0
[2026-01-08 14:50:21] 2026-01-08 19:49:05,794 | INFO     | exitmsg: OK
[2026-01-08 14:50:21] 2026-01-08 19:49:05,795 | INFO     | cpuconsumptiontime: 58383 s
[2026-01-08 14:50:21] 2026-01-08 19:49:05,795 | INFO     | nevents: 400
[2026-01-08 14:50:21] 2026-01-08 19:49:05,795 | INFO     | neventsw: 0
[2026-01-08 14:50:21] 2026-01-08 19:49:05,795 | INFO     | pid: 907928
[2026-01-08 14:50:21] 2026-01-08 19:49:05,795 | INFO     | pgrp: 907928
[2026-01-08 14:50:21] 2026-01-08 19:49:05,795 | INFO     | corecount: 8
[2026-01-08 14:50:21] 2026-01-08 19:49:05,795 | INFO     | event service: False
[2026-01-08 14:50:21] 2026-01-08 19:49:05,795 | INFO     | sizes: {0: 2283797, 1: 2283996, 12: 2283996, 23: 2284024, 34: 2284342, 45: 2284342, 41099: 2326979, 41105: 2335977, 41109: 2336033, 41153: 2336227}
[2026-01-08 14:50:21] 2026-01-08 19:49:05,795 | INFO     | --------------------------------------------------
[2026-01-08 14:50:21] 2026-01-08 19:49:05,795 | INFO     | 
[2026-01-08 14:50:21] 2026-01-08 19:49:05,795 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-08 14:50:21] 2026-01-08 19:49:06,181 | INFO     | time since job start (41232s) is within the limit (174528.0s)
[2026-01-08 14:50:21] 2026-01-08 19:49:06,235 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 14:50:21] 2026-01-08 19:49:06,311 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 14:50:21] 2026-01-08 19:49:06,311 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 14:50:21] 2026-01-08 19:49:06,311 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 14:50:21] 2026-01-08 19:49:06,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 14:50:21] 2026-01-08 19:49:06,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 14:50:21] 2026-01-08 19:49:06,311 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 14:50:21] 2026-01-08 19:49:06,311 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 14:50:21] 2026-01-08 19:49:06,311 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 14:50:21] 2026-01-08 19:49:06,311 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 14:50:21] 2026-01-08 19:49:06,311 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 14:50:21] 2026-01-08 19:49:06,311 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 14:50:21] 2026-01-08 19:49:06,312 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 14:50:21] 2026-01-08 19:49:06,312 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 14:50:21] 2026-01-08 19:49:06,312 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 14:50:21] 2026-01-08 19:49:06,312 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 14:50:21] 2026-01-08 19:49:06,312 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 14:50:21] 2026-01-08 19:49:06,312 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 14:50:21] 2026-01-08 19:49:06,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 14:50:21] 2026-01-08 19:49:06,312 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 14:50:21] 2026-01-08 19:49:06,312 | INFO     | job 6962914532 has completed (purged errors)
[2026-01-08 14:50:21] 2026-01-08 19:49:06,312 | INFO     | overall cleanup function is called
[2026-01-08 14:50:21] 2026-01-08 19:49:07,420 | INFO     | --- collectZombieJob: --- 10, [907928]
[2026-01-08 14:50:21] 2026-01-08 19:49:07,421 | INFO     | zombie collector waiting for pid 907928
[2026-01-08 14:50:21] 2026-01-08 19:49:07,421 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 14:50:21] 2026-01-08 19:49:07,421 | INFO     | collected zombie processes
[2026-01-08 14:50:21] 2026-01-08 19:49:07,421 | INFO     | will attempt to kill all subprocesses of pid=907928
[2026-01-08 14:50:21] 2026-01-08 19:49:10,738 | INFO     | process IDs to be killed: [907928] (in reverse order)
[2026-01-08 14:50:21] 2026-01-08 19:49:11,306 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 14:50:21] 2026-01-08 19:49:11,306 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 14:50:21] 2026-01-08 19:49:11,330 | INFO     | did not find any defunct processes belonging to 907928
[2026-01-08 14:50:21] 2026-01-08 19:49:11,354 | INFO     | did not find any defunct processes belonging to 907928
[2026-01-08 14:50:21] 2026-01-08 19:49:11,354 | INFO     | ready for new job
[2026-01-08 14:50:21] 2026-01-08 19:49:11,354 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 14:50:21] 2026-01-08 19:49:11,362 | INFO     | ***************************************
[2026-01-08 14:50:21] 2026-01-08 19:49:11,362 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 14:50:21] 2026-01-08 19:49:11,363 | INFO     | ***************************************
[2026-01-08 14:50:21] 2026-01-08 19:49:11,363 | INFO     | 
[2026-01-08 14:50:21] 2026-01-08 19:49:11,370 | INFO     | architecture information:
[2026-01-08 14:50:21] 2026-01-08 19:49:11,374 | INFO     | executing command: cat /etc/os-release
[2026-01-08 14:50:21] 2026-01-08 19:49:11,459 | INFO     | cat /etc/os-release:
[2026-01-08 14:50:21] NAME="CentOS Linux"
[2026-01-08 14:50:21] VERSION="7 (Core)"
[2026-01-08 14:50:21] ID="centos"
[2026-01-08 14:50:21] ID_LIKE="rhel fedora"
[2026-01-08 14:50:21] VERSION_ID="7"
[2026-01-08 14:50:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 14:50:21] ANSI_COLOR="0;31"
[2026-01-08 14:50:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 14:50:21] HOME_URL="https://www.centos.org/"
[2026-01-08 14:50:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 14:50:21] 
[2026-01-08 14:50:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 14:50:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 14:50:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 14:50:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 14:50:21] 
[2026-01-08 14:50:21] 2026-01-08 19:49:11,459 | INFO     | ***************************************
[2026-01-08 14:50:21] 2026-01-08 19:49:11,963 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-08 14:50:21] 2026-01-08 19:49:12,156 | INFO     | sufficient remaining disk space (73939288064 B)
[2026-01-08 14:50:21] 2026-01-08 19:49:12,156 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 14:50:21] 2026-01-08 19:49:12,157 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 14:50:21] 2026-01-08 19:49:12,157 | INFO     | update_server=False
[2026-01-08 14:50:21] 2026-01-08 19:49:12,157 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 14:50:21] 2026-01-08 19:49:12,181 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 14:50:21] 2026-01-08 19:49:12,609 | INFO     | all payload control threads have been joined
[2026-01-08 14:50:21] 2026-01-08 19:49:12,617 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 14:50:21] 2026-01-08 19:49:12,619 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 14:50:21] 2026-01-08 19:49:12,619 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 14:50:21] 2026-01-08 19:49:12,619 | INFO     | will abort loop
[2026-01-08 14:50:21] 2026-01-08 19:49:12,848 | INFO     | all data control threads have been joined
[2026-01-08 14:50:21] 2026-01-08 19:49:13,064 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 14:50:21] 2026-01-08 19:49:13,180 | INFO     | [job] retrieve thread has finished
[2026-01-08 14:50:21] 2026-01-08 19:49:13,223 | INFO     | all job control threads have been joined
[2026-01-08 14:50:21] 2026-01-08 19:49:13,268 | INFO     | [payload] validate_post thread has finished
[2026-01-08 14:50:21] 2026-01-08 19:49:13,512 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 14:50:21] 2026-01-08 19:49:13,616 | INFO     | [payload] control thread has finished
[2026-01-08 14:50:21] 2026-01-08 19:49:13,657 | INFO     | [job] job monitor thread has finished
[2026-01-08 14:50:21] 2026-01-08 19:49:13,855 | INFO     | [data] control thread has finished
[2026-01-08 14:50:21] 2026-01-08 19:49:13,920 | INFO     | [payload] failed_post thread has finished
[2026-01-08 14:50:21] 2026-01-08 19:49:13,957 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 14:50:21] 2026-01-08 19:49:14,213 | INFO     | [data] copytool_out thread has finished
[2026-01-08 14:50:21] 2026-01-08 19:49:14,230 | INFO     | [job] control thread has finished
[2026-01-08 14:50:21] 2026-01-08 19:49:14,473 | INFO     | [data] copytool_in thread has finished
[2026-01-08 14:50:21] 2026-01-08 19:49:14,475 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 14:50:21] 2026-01-08 19:49:14,606 | INFO     | [job] validate thread has finished
[2026-01-08 14:50:21] 2026-01-08 19:49:14,613 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 14:50:21] 2026-01-08 19:49:14,961 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 14:50:21] 2026-01-08 19:49:15,967 | INFO     | [job] queue monitor thread has finished
[2026-01-08 14:50:21] 2026-01-08 19:49:17,084 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 14:50:21] 2026-01-08 19:49:43,470 | INFO     | PID=887393 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 14:50:21] 2026-01-08 19:49:43,471 | INFO     | .. there are 17 such processes running
[2026-01-08 14:50:21] 2026-01-08 19:49:43,471 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 14:50:21] 2026-01-08 19:49:43,472 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 14:50:21] 2026-01-08 19:49:43,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 14:50:21] 2026-01-08 19:50:10,541 | INFO     | [monitor] cgroup control has ended
[2026-01-08 14:50:21] 2026-01-08 19:50:11,031 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140111939286848)>', '<ExcThread(monitor, started 140111480084224)>']
[2026-01-08 14:50:21] 2026-01-08 19:50:11,697 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 14:50:21] 2026-01-08 19:50:11,698 | INFO     | [monitor] control thread has ended
[2026-01-08 14:50:21] 2026-01-08 19:50:16,057 | INFO     | all workflow threads have been joined
[2026-01-08 14:50:21] 2026-01-08 19:50:16,057 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 14:50:21] 2026-01-08 19:50:16,057 | INFO     | traces error code: 0
[2026-01-08 14:50:21] 2026-01-08 19:50:16,057 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 14:50:21] 2026-01-08 19:50:19,202 [wrapper] ==== pilot stdout END ====
[2026-01-08 14:50:21] 2026-01-08 19:50:19,360 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 14:50:21] 2026-01-08 19:50:19,404 [wrapper] pilotpid: 887393
[2026-01-08 14:50:21] 2026-01-08 19:50:19,485 [wrapper] Pilot exit status: 0
[2026-01-08 14:50:21] 2026-01-08 19:50:19,668 [wrapper] pandaids: 6962914532
[2026-01-08 14:50:21] 2026-01-08 19:50:20,324 [wrapper] cleanup supervisor_pilot 2747951 887394
[2026-01-08 14:50:21] 2026-01-08 19:50:20,490 [wrapper] Test setup, not cleaning
[2026-01-08 14:50:21] 2026-01-08 19:50:20,544 [wrapper] apfmon messages muted
[2026-01-08 14:50:21] 2026-01-08 19:50:20,573 [wrapper] ==== wrapper stdout END ====
[2026-01-08 14:50:21] 2026-01-08 19:50:20,619 [wrapper] ==== wrapper stderr END ====
[2026-01-08 14:50:21]  *** Error codes and diagnostics ***
[2026-01-08 14:50:21]     "exeErrorCode": 0,
[2026-01-08 14:50:21]     "exeErrorDiag": "",
[2026-01-08 14:50:21]     "pilotErrorCode": 0,
[2026-01-08 14:50:21]     "pilotErrorDiag": "",
[2026-01-08 14:50:21]  *** Listing of results directory ***
[2026-01-08 14:50:21] total 452204
[2026-01-08 14:50:21] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-08 14:50:21] -rwx------. 1 boincer umatlas     36322 Jan  8 03:01 runpilot2-wrapper.sh
[2026-01-08 14:50:21] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:01 queuedata.json
[2026-01-08 14:50:21] -rw-r--r--. 1 boincer umatlas       100 Jan  8 03:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 14:50:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 03:20 run_atlas
[2026-01-08 14:50:21] -rw-r--r--. 1 boincer umatlas       105 Jan  8 03:20 job.xml
[2026-01-08 14:50:21] -rw-r--r--. 2 boincer umatlas 225285657 Jan  8 03:20 EVNT.47898824._000321.pool.root.1
[2026-01-08 14:50:21] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 03:20 start_atlas.sh
[2026-01-08 14:50:21] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 03:20 shared
[2026-01-08 14:50:21] -rw-r--r--. 2 boincer umatlas    592401 Jan  8 03:20 input.tar.gz
[2026-01-08 14:50:21] -rw-r--r--. 1 boincer umatlas         0 Jan  8 03:20 boinc_lockfile
[2026-01-08 14:50:21] -rw-r--r--. 1 boincer umatlas      2518 Jan  8 03:20 pandaJob.out
[2026-01-08 14:50:21] -rw-------. 1 boincer umatlas        57 Jan  8 03:20 setup.sh.local
[2026-01-08 14:50:21] -rw-------. 1 boincer umatlas    989819 Jan  8 03:21 agis_schedconf.cvmfs.json
[2026-01-08 14:50:21] drwx------. 5 boincer umatlas      4096 Jan  8 03:21 pilot3
[2026-01-08 14:50:21] -rw-------. 1 boincer umatlas 222418007 Jan  8 14:46 HITS.47898826._017592.pool.root.1
[2026-01-08 14:50:21] -rw-r--r--. 1 boincer umatlas       531 Jan  8 14:46 boinc_task_state.xml
[2026-01-08 14:50:21] -rw-------. 1 boincer umatlas      1055 Jan  8 14:48 memory_monitor_summary.json
[2026-01-08 14:50:21] -rw-------. 1 boincer umatlas   1516240 Jan  8 14:48 agis_ddmendpoints.agis.ALL.json
[2026-01-08 14:50:21] -rw-------. 1 boincer umatlas    793122 Jan  8 14:48 log.47898826._017592.job.log.tgz.1
[2026-01-08 14:50:21] -rw-r--r--. 1 boincer umatlas      6843 Jan  8 14:48 init_data.xml
[2026-01-08 14:50:21] -rw-------. 1 boincer umatlas      7824 Jan  8 14:49 heartbeat.json
[2026-01-08 14:50:21] -rw-------. 1 boincer umatlas        95 Jan  8 14:49 pilot_heartbeat.json
[2026-01-08 14:50:21] -rw-------. 1 boincer umatlas      5009 Jan  8 14:50 pilotlog.txt
[2026-01-08 14:50:21] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 14:50 boinc_mmap_file
[2026-01-08 14:50:21] -rw-r--r--. 1 boincer umatlas        28 Jan  8 14:50 wrapper_checkpoint.txt
[2026-01-08 14:50:21] -rw-------. 1 boincer umatlas   4932339 Jan  8 14:50 log.47898826._017592.job.log.1
[2026-01-08 14:50:21] -rw-------. 1 boincer umatlas       357 Jan  8 14:50 output.list
[2026-01-08 14:50:21] -rw-r--r--. 1 boincer umatlas       620 Jan  8 14:50 runtime_log
[2026-01-08 14:50:21] -rw-------. 1 boincer umatlas   5744640 Jan  8 14:50 result.tar.gz
[2026-01-08 14:50:21] -rw-r--r--. 1 boincer umatlas      9353 Jan  8 14:50 runtime_log.err
[2026-01-08 14:50:21] -rw-------. 1 boincer umatlas       660 Jan  8 14:50 aLLNDmG8zx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlIeKDmVvA56m.diag
[2026-01-08 14:50:21] -rw-r--r--. 1 boincer umatlas      7719 Jan  8 14:50 stderr.txt
[2026-01-08 14:50:21] HITS file was successfully produced:
[2026-01-08 14:50:21] -rw-------. 1 boincer umatlas 222418007 Jan  8 14:46 shared/HITS.pool.root.1
[2026-01-08 14:50:21]  *** Contents of shared directory: ***
[2026-01-08 14:50:21] total 443428
[2026-01-08 14:50:21] -rw-r--r--. 2 boincer umatlas 225285657 Jan  8 03:20 ATLAS.root_0
[2026-01-08 14:50:21] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 03:20 start_atlas.sh
[2026-01-08 14:50:21] -rw-r--r--. 2 boincer umatlas    592401 Jan  8 03:20 input.tar.gz
[2026-01-08 14:50:21] -rw-------. 1 boincer umatlas 222418007 Jan  8 14:46 HITS.pool.root.1
[2026-01-08 14:50:21] -rw-------. 1 boincer umatlas   5744640 Jan  8 14:50 result.tar.gz
14:50:23 (879287): run_atlas exited; CPU time 59583.324499
14:50:23 (879287): called boinc_finish(0)

</stderr_txt>
]]>

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