Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:37:51 (26713): wrapper (7.7.26015): starting
17:37:51 (26713): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 17:37:51] Arguments: --nthreads 8
[2026-01-08 17:37:51] Threads: 8
[2026-01-08 17:37:51] Checking for CVMFS
[2026-01-08 17:37:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 17:37:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 17:37:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 17:37:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 17:37:55] 2.11.2.0 21292 34207 130944 154914 1 60 24722818 25165825 899 130560 0 7347994 99.554 11296235 5274 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 17:37:55] CVMFS is ok
[2026-01-08 17:37:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 17:37:55] Checking for apptainer binary...
[2026-01-08 17:37:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 17:37:55] Running /usr/bin/apptainer --version
[2026-01-08 17:37:55] apptainer version 1.3.2-1.el7
[2026-01-08 17:37:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 17:38:09] cg-vwn383.simple-grid.lan
[2026-01-08 17:38:09] apptainer works
[2026-01-08 17:38:09] Set ATHENA_PROC_NUMBER=8
[2026-01-08 17:38:09] Set ATHENA_CORE_NUMBER=8
[2026-01-08 17:38:09] Starting ATLAS job with PandaID=6962914331
[2026-01-08 17:38:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/25 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 23:05:12]  *** The last 200 lines of the pilot log: ***
[2026-01-08 23:05:12] 2026-01-08 22:03:59,202 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 23:05:12] 2026-01-08 22:03:59,204 | INFO     | using path: /var/lib/boinc/slots/25/PanDA_Pilot-6962914331/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 23:05:12] 2026-01-08 22:03:59,205 | INFO     | extracted standard info from prmon json
[2026-01-08 23:05:12] 2026-01-08 22:03:59,205 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 23:05:12] 2026-01-08 22:03:59,205 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 23:05:12] 2026-01-08 22:03:59,206 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 23:05:12] 2026-01-08 22:03:59,206 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 23:05:12] 2026-01-08 22:03:59,213 | INFO     | fitting pss+swap vs Time
[2026-01-08 23:05:12] 2026-01-08 22:03:59,213 | INFO     | sum of square deviations: 8884603792.5
[2026-01-08 23:05:12] 2026-01-08 22:03:59,217 | INFO     | sum of deviations: 136517788604.50005
[2026-01-08 23:05:12] 2026-01-08 22:03:59,217 | INFO     | mean x: 1767900372.5
[2026-01-08 23:05:12] 2026-01-08 22:03:59,217 | INFO     | mean y: 2447349.8006535945
[2026-01-08 23:05:12] 2026-01-08 22:03:59,217 | INFO     | intersect: -27162506199.451485
[2026-01-08 23:05:12] 2026-01-08 22:03:59,218 | INFO     | chi2: 6.792258847840697
[2026-01-08 23:05:12] 2026-01-08 22:03:59,218 | INFO     | sum of square deviations: 8456158550.0
[2026-01-08 23:05:12] 2026-01-08 22:03:59,221 | INFO     | sum of deviations: 154413122687.00003
[2026-01-08 23:05:12] 2026-01-08 22:03:59,222 | INFO     | mean x: 1767900220.0
[2026-01-08 23:05:12] 2026-01-08 22:03:59,222 | INFO     | mean y: 2453623.7607973423
[2026-01-08 23:05:12] 2026-01-08 22:03:59,222 | INFO     | intersect: -32280171158.532856
[2026-01-08 23:05:12] 2026-01-08 22:03:59,222 | INFO     | chi2: 6.064070741580315
[2026-01-08 23:05:12] 2026-01-08 22:03:59,223 | INFO     | current chi2=6.064070741580315 (change=10.720853291565557 %)
[2026-01-08 23:05:12] 2026-01-08 22:03:59,223 | INFO     | right removable region: 300
[2026-01-08 23:05:12] 2026-01-08 22:03:59,223 | INFO     | sum of square deviations: 8456158550.0
[2026-01-08 23:05:12] 2026-01-08 22:03:59,226 | INFO     | sum of deviations: 32346718270.00001
[2026-01-08 23:05:12] 2026-01-08 22:03:59,227 | INFO     | mean x: 1767900525.0
[2026-01-08 23:05:12] 2026-01-08 22:03:59,227 | INFO     | mean y: 2484400.4318936877
[2026-01-08 23:05:12] 2026-01-08 22:03:59,227 | INFO     | intersect: -6760134804.663322
[2026-01-08 23:05:12] 2026-01-08 22:03:59,227 | INFO     | chi2: 2.2626800477882894
[2026-01-08 23:05:12] 2026-01-08 22:03:59,228 | INFO     | current chi2=2.2626800477882894 (change=66.68737015952196 %)
[2026-01-08 23:05:12] 2026-01-08 22:03:59,228 | INFO     | sum of square deviations: 8041713570.0
[2026-01-08 23:05:12] 2026-01-08 22:03:59,231 | INFO     | sum of deviations: -20635661299.499996
[2026-01-08 23:05:12] 2026-01-08 22:03:59,232 | INFO     | mean x: 1767900677.5
[2026-01-08 23:05:12] 2026-01-08 22:03:59,232 | INFO     | mean y: 2503806.5371621624
[2026-01-08 23:05:12] 2026-01-08 22:03:59,232 | INFO     | intersect: 4539074187.275875
[2026-01-08 23:05:12] 2026-01-08 22:03:59,232 | INFO     | chi2: 0.8789704232919336
[2026-01-08 23:05:12] 2026-01-08 22:03:59,232 | INFO     | current chi2=0.8789704232919336 (change=61.1535698937592 %)
[2026-01-08 23:05:12] 2026-01-08 22:03:59,233 | INFO     | sum of square deviations: 7641036290.0
[2026-01-08 23:05:12] 2026-01-08 22:03:59,236 | INFO     | sum of deviations: -26040621779.0
[2026-01-08 23:05:12] 2026-01-08 22:03:59,236 | INFO     | mean x: 1767900830.0
[2026-01-08 23:05:12] 2026-01-08 22:03:59,236 | INFO     | mean y: 2505856.1615120275
[2026-01-08 23:05:12] 2026-01-08 22:03:59,237 | INFO     | intersect: 6027504967.4810295
[2026-01-08 23:05:12] 2026-01-08 22:03:59,237 | INFO     | chi2: 0.8613245923317723
[2026-01-08 23:05:12] 2026-01-08 22:03:59,237 | INFO     | current chi2=0.8613245923317723 (change=2.007556852035354 %)
[2026-01-08 23:05:12] 2026-01-08 22:03:59,237 | INFO     | left removable region: 30
[2026-01-08 23:05:12] 2026-01-08 22:03:59,238 | INFO     | sum of square deviations: 6103286527.5
[2026-01-08 23:05:12] 2026-01-08 22:03:59,240 | INFO     | sum of deviations: 9386896092.5
[2026-01-08 23:05:12] 2026-01-08 22:03:59,241 | INFO     | mean x: 1767901104.5
[2026-01-08 23:05:12] 2026-01-08 22:03:59,241 | INFO     | mean y: 2506897.722222222
[2026-01-08 23:05:12] 2026-01-08 22:03:59,241 | INFO     | intersect: -2716536996.904677
[2026-01-08 23:05:12] 2026-01-08 22:03:59,241 | INFO     | chi2: 0.0016878061660164278
[2026-01-08 23:05:12] 2026-01-08 22:03:59,242 | INFO     | current memory leak: 1.54 B/s (using 270 data points, chi2=0.00)
[2026-01-08 23:05:12] 2026-01-08 22:03:59,242 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-08 23:05:12] 2026-01-08 22:03:59,243 | INFO     | ..............................
[2026-01-08 23:05:12] 2026-01-08 22:03:59,243 | INFO     | . Timing measurements:
[2026-01-08 23:05:12] 2026-01-08 22:03:59,243 | INFO     | . get job = 0 s
[2026-01-08 23:05:12] 2026-01-08 22:03:59,243 | INFO     | . initial setup = 11 s
[2026-01-08 23:05:12] 2026-01-08 22:03:59,243 | INFO     | . payload setup = 144 s
[2026-01-08 23:05:12] 2026-01-08 22:03:59,243 | INFO     | . stage-in = 0 s
[2026-01-08 23:05:12] 2026-01-08 22:03:59,243 | INFO     | . payload execution = 18814 s
[2026-01-08 23:05:12] 2026-01-08 22:03:59,244 | INFO     | . stage-out = 3 s
[2026-01-08 23:05:12] 2026-01-08 22:03:59,244 | INFO     | . log creation = 1 s
[2026-01-08 23:05:12] 2026-01-08 22:03:59,244 | INFO     | ..............................
[2026-01-08 23:05:12] 2026-01-08 22:03:59,759 | INFO     | 
[2026-01-08 23:05:12] 2026-01-08 22:03:59,760 | INFO     | job summary report
[2026-01-08 23:05:12] 2026-01-08 22:03:59,760 | INFO     | --------------------------------------------------
[2026-01-08 23:05:12] 2026-01-08 22:03:59,760 | INFO     | PanDA job id: 6962914331
[2026-01-08 23:05:12] 2026-01-08 22:03:59,760 | INFO     | task id: 47898826
[2026-01-08 23:05:12] 2026-01-08 22:03:59,760 | INFO     | errors: (none)
[2026-01-08 23:05:12] 2026-01-08 22:03:59,760 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 23:05:12] 2026-01-08 22:03:59,761 | INFO     | pilot state: finished 
[2026-01-08 23:05:12] 2026-01-08 22:03:59,761 | INFO     | transexitcode: 0
[2026-01-08 23:05:12] 2026-01-08 22:03:59,761 | INFO     | exeerrorcode: 0
[2026-01-08 23:05:12] 2026-01-08 22:03:59,761 | INFO     | exeerrordiag: 
[2026-01-08 23:05:12] 2026-01-08 22:03:59,761 | INFO     | exitcode: 0
[2026-01-08 23:05:12] 2026-01-08 22:03:59,761 | INFO     | exitmsg: OK
[2026-01-08 23:05:12] 2026-01-08 22:03:59,761 | INFO     | cpuconsumptiontime: 81235 s
[2026-01-08 23:05:12] 2026-01-08 22:03:59,761 | INFO     | nevents: 400
[2026-01-08 23:05:12] 2026-01-08 22:03:59,762 | INFO     | neventsw: 0
[2026-01-08 23:05:12] 2026-01-08 22:03:59,762 | INFO     | pid: 4497
[2026-01-08 23:05:12] 2026-01-08 22:03:59,762 | INFO     | pgrp: 4497
[2026-01-08 23:05:12] 2026-01-08 22:03:59,762 | INFO     | corecount: 8
[2026-01-08 23:05:12] 2026-01-08 22:03:59,762 | INFO     | event service: False
[2026-01-08 23:05:12] 2026-01-08 22:03:59,762 | INFO     | sizes: {0: 2283140, 1: 2283826, 2: 2284025, 13: 2284025, 23: 2284081, 34: 2284109, 45: 2284265, 55: 2284293, 66: 2284321, 77: 2284349, 88: 2284405, 98: 2284713, 10
[2026-01-08 23:05:12] 2026-01-08 22:03:59,762 | INFO     | --------------------------------------------------
[2026-01-08 23:05:12] 2026-01-08 22:03:59,762 | INFO     | 
[2026-01-08 23:05:12] 2026-01-08 22:03:59,762 | INFO     | executing command: ls -lF /var/lib/boinc/slots/25
[2026-01-08 23:05:12] 2026-01-08 22:04:00,053 | INFO     | time since job start (19290s) is within the limit (174528.0s)
[2026-01-08 23:05:12] 2026-01-08 22:04:00,194 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 23:05:12] 2026-01-08 22:04:00,194 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 23:05:12] 2026-01-08 22:04:00,194 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 23:05:12] 2026-01-08 22:04:00,195 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 23:05:12] 2026-01-08 22:04:00,195 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 23:05:12] 2026-01-08 22:04:00,195 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 23:05:12] 2026-01-08 22:04:00,195 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 23:05:12] 2026-01-08 22:04:00,195 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 23:05:12] 2026-01-08 22:04:00,195 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 23:05:12] 2026-01-08 22:04:00,195 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 23:05:12] 2026-01-08 22:04:00,195 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 23:05:12] 2026-01-08 22:04:00,195 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 23:05:12] 2026-01-08 22:04:00,196 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 23:05:12] 2026-01-08 22:04:00,196 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 23:05:12] 2026-01-08 22:04:00,196 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 23:05:12] 2026-01-08 22:04:00,196 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 23:05:12] 2026-01-08 22:04:00,196 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 23:05:12] 2026-01-08 22:04:00,196 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 23:05:12] 2026-01-08 22:04:00,196 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 23:05:12] 2026-01-08 22:04:00,196 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 23:05:12] 2026-01-08 22:04:00,197 | INFO     | job 6962914331 has completed (purged errors)
[2026-01-08 23:05:12] 2026-01-08 22:04:00,197 | INFO     | overall cleanup function is called
[2026-01-08 23:05:12] 2026-01-08 22:04:01,205 | INFO     | --- collectZombieJob: --- 10, [4497]
[2026-01-08 23:05:12] 2026-01-08 22:04:01,206 | INFO     | zombie collector waiting for pid 4497
[2026-01-08 23:05:12] 2026-01-08 22:04:01,206 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 23:05:12] 2026-01-08 22:04:01,206 | INFO     | collected zombie processes
[2026-01-08 23:05:12] 2026-01-08 22:04:01,206 | INFO     | will attempt to kill all subprocesses of pid=4497
[2026-01-08 23:05:12] 2026-01-08 22:04:01,309 | INFO     | process IDs to be killed: [4497] (in reverse order)
[2026-01-08 23:05:12] 2026-01-08 22:04:02,210 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 23:05:12] 2026-01-08 22:04:02,211 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 23:05:12] 2026-01-08 22:04:02,213 | INFO     | did not find any defunct processes belonging to 4497
[2026-01-08 23:05:12] 2026-01-08 22:04:02,215 | INFO     | did not find any defunct processes belonging to 4497
[2026-01-08 23:05:12] 2026-01-08 22:04:02,215 | INFO     | ready for new job
[2026-01-08 23:05:12] 2026-01-08 22:04:02,215 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 23:05:12] 2026-01-08 22:04:02,217 | INFO     | ***************************************
[2026-01-08 23:05:12] 2026-01-08 22:04:02,217 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 23:05:12] 2026-01-08 22:04:02,218 | INFO     | ***************************************
[2026-01-08 23:05:12] 2026-01-08 22:04:02,218 | INFO     | 
[2026-01-08 23:05:12] 2026-01-08 22:04:02,218 | INFO     | pilot is running in a VM
[2026-01-08 23:05:12] 2026-01-08 22:04:02,218 | INFO     | architecture information:
[2026-01-08 23:05:12] 2026-01-08 22:04:02,238 | INFO     | executing command: cat /etc/os-release
[2026-01-08 23:05:12] 2026-01-08 22:04:02,476 | INFO     | cat /etc/os-release:
[2026-01-08 23:05:12] NAME="CentOS Linux"
[2026-01-08 23:05:12] VERSION="7 (Core)"
[2026-01-08 23:05:12] ID="centos"
[2026-01-08 23:05:12] ID_LIKE="rhel fedora"
[2026-01-08 23:05:12] VERSION_ID="7"
[2026-01-08 23:05:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 23:05:12] ANSI_COLOR="0;31"
[2026-01-08 23:05:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 23:05:12] HOME_URL="https://www.centos.org/"
[2026-01-08 23:05:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 23:05:12] 
[2026-01-08 23:05:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 23:05:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 23:05:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 23:05:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 23:05:12] 
[2026-01-08 23:05:12] 2026-01-08 22:04:02,476 | INFO     | ***************************************
[2026-01-08 23:05:12] 2026-01-08 22:04:02,980 | INFO     | executing command: df -mP /var/lib/boinc/slots/25
[2026-01-08 23:05:12] 2026-01-08 22:04:03,224 | INFO     | sufficient remaining disk space (497124638720 B)
[2026-01-08 23:05:12] 2026-01-08 22:04:03,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 23:05:12] 2026-01-08 22:04:03,225 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 23:05:12] 2026-01-08 22:04:03,225 | INFO     | update_server=False
[2026-01-08 23:05:12] 2026-01-08 22:04:03,225 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 23:05:12] 2026-01-08 22:04:03,227 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 23:05:12] 2026-01-08 22:04:03,233 | INFO     | all data control threads have been joined
[2026-01-08 23:05:12] 2026-01-08 22:04:03,650 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 23:05:12] 2026-01-08 22:04:03,662 | INFO     | all job control threads have been joined
[2026-01-08 23:05:12] 2026-01-08 22:04:03,772 | INFO     | all payload control threads have been joined
[2026-01-08 23:05:12] 2026-01-08 22:04:04,152 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:05:12] 2026-01-08 22:04:04,153 | INFO     | aborting loop
[2026-01-08 23:05:12] 2026-01-08 22:04:04,232 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 23:05:12] 2026-01-08 22:04:04,232 | INFO     | [job] retrieve thread has finished
[2026-01-08 23:05:12] 2026-01-08 22:04:04,238 | INFO     | [data] control thread has finished
[2026-01-08 23:05:12] 2026-01-08 22:04:04,353 | INFO     | [payload] validate_post thread has finished
[2026-01-08 23:05:12] 2026-01-08 22:04:04,384 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:05:12] 2026-01-08 22:04:04,432 | INFO     | [job] validate thread has finished
[2026-01-08 23:05:12] 2026-01-08 22:04:04,511 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 23:05:12] 2026-01-08 22:04:04,587 | INFO     | [data] copytool_in thread has finished
[2026-01-08 23:05:12] 2026-01-08 22:04:04,669 | INFO     | [job] control thread has finished
[2026-01-08 23:05:12] 2026-01-08 22:04:04,779 | INFO     | [payload] control thread has finished
[2026-01-08 23:05:12] 2026-01-08 22:04:05,159 | INFO     | [job] job monitor thread has finished
[2026-01-08 23:05:12] 2026-01-08 22:04:05,391 | INFO     | [job] queue monitor thread has finished
[2026-01-08 23:05:12] 2026-01-08 22:04:05,405 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 23:05:12] 2026-01-08 22:04:05,453 | INFO     | [payload] failed_post thread has finished
[2026-01-08 23:05:12] 2026-01-08 22:04:05,658 | INFO     | [data] copytool_out thread has finished
[2026-01-08 23:05:12] 2026-01-08 22:04:07,236 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 23:05:12] 2026-01-08 22:04:14,160 | INFO     | job.realtimelogging is not enabled
[2026-01-08 23:05:12] 2026-01-08 22:04:15,167 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 23:05:12] 2026-01-08 22:04:33,223 | INFO     | PID=30435 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 23:05:12] 2026-01-08 22:04:33,223 | INFO     | .. there are 2 such processes running
[2026-01-08 23:05:12] 2026-01-08 22:04:33,223 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 23:05:12] 2026-01-08 22:04:33,224 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 23:05:12] 2026-01-08 22:04:33,224 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 23:05:12] 2026-01-08 22:05:02,686 | INFO     | [monitor] cgroup control has ended
[2026-01-08 23:05:12] 2026-01-08 22:05:03,015 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140394613114688)>', '<ExcThread(monitor, started 140393890969344)>']
[2026-01-08 23:05:12] 2026-01-08 22:05:03,403 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 23:05:12] 2026-01-08 22:05:03,404 | INFO     | [monitor] control thread has ended
[2026-01-08 23:05:12] 2026-01-08 22:05:08,041 | INFO     | all workflow threads have been joined
[2026-01-08 23:05:12] 2026-01-08 22:05:08,041 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 23:05:12] 2026-01-08 22:05:08,041 | INFO     | traces error code: 0
[2026-01-08 23:05:12] 2026-01-08 22:05:08,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 23:05:12] 2026-01-08 22:05:08,364 [wrapper] ==== pilot stdout END ====
[2026-01-08 23:05:12] 2026-01-08 22:05:08,467 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 23:05:12] 2026-01-08 22:05:08,556 [wrapper] pilotpid: 30435
[2026-01-08 23:05:12] 2026-01-08 22:05:08,645 [wrapper] Pilot exit status: 0
[2026-01-08 23:05:12] 2026-01-08 22:05:09,082 [wrapper] pandaids: 6962914331
[2026-01-08 23:05:12] 2026-01-08 22:05:09,221 [wrapper] cleanup supervisor_pilot 17562 30436
[2026-01-08 23:05:12] 2026-01-08 22:05:09,305 [wrapper] Test setup, not cleaning
[2026-01-08 23:05:12] 2026-01-08 22:05:09,407 [wrapper] apfmon messages muted
[2026-01-08 23:05:12] 2026-01-08 22:05:09,517 [wrapper] ==== wrapper stdout END ====
[2026-01-08 23:05:12] 2026-01-08 22:05:09,620 [wrapper] ==== wrapper stderr END ====
[2026-01-08 23:05:12]  *** Error codes and diagnostics ***
[2026-01-08 23:05:12]     "exeErrorCode": 0,
[2026-01-08 23:05:12]     "exeErrorDiag": "",
[2026-01-08 23:05:12]     "pilotErrorCode": 0,
[2026-01-08 23:05:12]     "pilotErrorDiag": "",
[2026-01-08 23:05:12]  *** Listing of results directory ***
[2026-01-08 23:05:12] total 440264
[2026-01-08 23:05:12] -rw-r--r--. 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-08 23:05:12] -rwx------. 1 boinc boinc     36322 Jan  8 09:00 runpilot2-wrapper.sh
[2026-01-08 23:05:12] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:01 queuedata.json
[2026-01-08 23:05:12] -rw-r--r--. 1 boinc boinc       100 Jan  8 17:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 23:05:12] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 17:37 run_atlas
[2026-01-08 23:05:12] -rw-r--r--. 1 boinc boinc       105 Jan  8 17:37 job.xml
[2026-01-08 23:05:12] -rw-r--r--. 1 boinc boinc      6391 Jan  8 17:37 init_data.xml
[2026-01-08 23:05:12] -rw-r--r--. 2 boinc boinc 225122489 Jan  8 17:37 EVNT.47898824._000319.pool.root.1
[2026-01-08 23:05:12] -rw-r--r--. 2 boinc boinc     15847 Jan  8 17:37 start_atlas.sh
[2026-01-08 23:05:12] drwxrwx--x. 2 boinc boinc        68 Jan  8 17:37 shared
[2026-01-08 23:05:12] -rw-r--r--. 2 boinc boinc    592400 Jan  8 17:37 input.tar.gz
[2026-01-08 23:05:12] -rw-r--r--. 1 boinc boinc         0 Jan  8 17:37 boinc_lockfile
[2026-01-08 23:05:12] -rw-r--r--. 1 boinc boinc      2518 Jan  8 17:38 pandaJob.out
[2026-01-08 23:05:12] -rw-------. 1 boinc boinc    989837 Jan  8 17:42 agis_schedconf.cvmfs.json
[2026-01-08 23:05:12] drwx------. 5 boinc boinc      4096 Jan  8 17:42 pilot3
[2026-01-08 23:05:12] -rw-------. 1 boinc boinc 215587057 Jan  8 23:00 HITS.47898826._017548.pool.root.1
[2026-01-08 23:05:12] -rw-r--r--. 1 boinc boinc       531 Jan  8 23:00 boinc_task_state.xml
[2026-01-08 23:05:12] -rw-------. 1 boinc boinc      1020 Jan  8 23:01 memory_monitor_summary.json
[2026-01-08 23:05:12] -rw-------. 1 boinc boinc   1516240 Jan  8 23:02 agis_ddmendpoints.agis.ALL.json
[2026-01-08 23:05:12] -rw-------. 1 boinc boinc    535542 Jan  8 23:02 log.47898826._017548.job.log.tgz.1
[2026-01-08 23:05:12] -rw-------. 1 boinc boinc        95 Jan  8 23:03 pilot_heartbeat.json
[2026-01-08 23:05:12] -rw-------. 1 boinc boinc      7787 Jan  8 23:03 heartbeat.json
[2026-01-08 23:05:12] -rw-r--r--. 1 boinc boinc      8192 Jan  8 23:04 boinc_mmap_file
[2026-01-08 23:05:12] -rw-r--r--. 1 boinc boinc        28 Jan  8 23:04 wrapper_checkpoint.txt
[2026-01-08 23:05:12] -rw-------. 1 boinc boinc      4957 Jan  8 23:05 pilotlog.txt
[2026-01-08 23:05:12] -rw-------. 1 boinc boinc   2574840 Jan  8 23:05 log.47898826._017548.job.log.1
[2026-01-08 23:05:12] -rw-------. 1 boinc boinc       357 Jan  8 23:05 output.list
[2026-01-08 23:05:12] -rw-r--r--. 1 boinc boinc       620 Jan  8 23:05 runtime_log
[2026-01-08 23:05:12] -rw-------. 1 boinc boinc   3133440 Jan  8 23:05 result.tar.gz
[2026-01-08 23:05:12] -rw-r--r--. 1 boinc boinc      8833 Jan  8 23:05 runtime_log.err
[2026-01-08 23:05:12] -rw-------. 1 boinc boinc       656 Jan  8 23:05 odwNDm87zx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpOjKDmsfQ4tn.diag
[2026-01-08 23:05:12] -rw-r--r--. 1 boinc boinc     20772 Jan  8 23:05 stderr.txt
[2026-01-08 23:05:12] HITS file was successfully produced:
[2026-01-08 23:05:12] -rw-------. 1 boinc boinc 215587057 Jan  8 23:00 shared/HITS.pool.root.1
[2026-01-08 23:05:12]  *** Contents of shared directory: ***
[2026-01-08 23:05:12] total 434040
[2026-01-08 23:05:12] -rw-r--r--. 2 boinc boinc 225122489 Jan  8 17:37 ATLAS.root_0
[2026-01-08 23:05:12] -rw-r--r--. 2 boinc boinc     15847 Jan  8 17:37 start_atlas.sh
[2026-01-08 23:05:12] -rw-r--r--. 2 boinc boinc    592400 Jan  8 17:37 input.tar.gz
[2026-01-08 23:05:12] -rw-------. 1 boinc boinc 215587057 Jan  8 23:00 HITS.pool.root.1
[2026-01-08 23:05:12] -rw-------. 1 boinc boinc   3133440 Jan  8 23:05 result.tar.gz
23:05:13 (26713): run_atlas exited; CPU time 81440.675332
23:05:13 (26713): called boinc_finish(0)

</stderr_txt>
]]>

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