Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:39:05 (9987): wrapper (7.7.26015): starting
17:39:05 (9987): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 17:39:05] Arguments: --nthreads 8
[2026-01-08 17:39:05] Threads: 8
[2026-01-08 17:39:05] Checking for CVMFS
[2026-01-08 17:39:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 17:39:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 17:39:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 17:39:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 17:39:08] 2.11.2.0 11275 34227 127184 154914 1 61 21600931 25165825 899 130560 0 14919417 99.838 13065414 3207 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 17:39:08] CVMFS is ok
[2026-01-08 17:39:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 17:39:08] Checking for apptainer binary...
[2026-01-08 17:39:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 17:39:08] Running /usr/bin/apptainer --version
[2026-01-08 17:39:08] apptainer version 1.3.2-1.el7
[2026-01-08 17:39:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 17:39:40] cg-vwn441.simple-grid.lan
[2026-01-08 17:39:40] apptainer works
[2026-01-08 17:39:40] Set ATHENA_PROC_NUMBER=8
[2026-01-08 17:39:40] Set ATHENA_CORE_NUMBER=8
[2026-01-08 17:39:40] Starting ATLAS job with PandaID=6962914227
[2026-01-08 17:39:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 23:03:33]  *** The last 200 lines of the pilot log: ***
[2026-01-08 23:03:33] 2026-01-08 22:02:50,903 | INFO     | current chi2=0.034604543857173195 (change=29.625889050239394 %)
[2026-01-08 23:03:33] 2026-01-08 22:02:50,904 | INFO     | sum of square deviations: 7178069470.0
[2026-01-08 23:03:33] 2026-01-08 22:02:50,907 | INFO     | sum of deviations: 17280087563.999996
[2026-01-08 23:03:33] 2026-01-08 22:02:50,907 | INFO     | mean x: 1767901040.0
[2026-01-08 23:03:33] 2026-01-08 22:02:50,907 | INFO     | mean y: 2499017.357894737
[2026-01-08 23:03:33] 2026-01-08 22:02:50,907 | INFO     | intersect: -4253448198.4450555
[2026-01-08 23:03:33] 2026-01-08 22:02:50,908 | INFO     | chi2: 0.0037066326560469087
[2026-01-08 23:03:33] 2026-01-08 22:02:50,908 | INFO     | current chi2=0.0037066326560469087 (change=89.28859553431576 %)
[2026-01-08 23:03:33] 2026-01-08 22:02:50,908 | INFO     | sum of square deviations: 6806862510.0
[2026-01-08 23:03:33] 2026-01-08 22:02:50,911 | INFO     | sum of deviations: 14238406317.000002
[2026-01-08 23:03:33] 2026-01-08 22:02:50,912 | INFO     | mean x: 1767901192.5
[2026-01-08 23:03:33] 2026-01-08 22:02:50,912 | INFO     | mean y: 2500265.3
[2026-01-08 23:03:33] 2026-01-08 22:02:50,912 | INFO     | intersect: -3695546444.199916
[2026-01-08 23:03:33] 2026-01-08 22:02:50,912 | INFO     | chi2: 0.0014816061239675599
[2026-01-08 23:03:33] 2026-01-08 22:02:50,913 | INFO     | current chi2=0.0014816061239675599 (change=60.02824500155136 %)
[2026-01-08 23:03:33] 2026-01-08 22:02:50,913 | INFO     | sum of square deviations: 6448679050.0
[2026-01-08 23:03:33] 2026-01-08 22:02:50,916 | INFO     | sum of deviations: 12161949847.0
[2026-01-08 23:03:33] 2026-01-08 22:02:50,916 | INFO     | mean x: 1767901345.0
[2026-01-08 23:03:33] 2026-01-08 22:02:50,916 | INFO     | mean y: 2501147.7454545456
[2026-01-08 23:03:33] 2026-01-08 22:02:50,916 | INFO     | intersect: -3331689827.74337
[2026-01-08 23:03:33] 2026-01-08 22:02:50,917 | INFO     | chi2: 0.0005748661999643629
[2026-01-08 23:03:33] 2026-01-08 22:02:50,917 | INFO     | current chi2=0.0005748661999643629 (change=61.199795906287044 %)
[2026-01-08 23:03:33] 2026-01-08 22:02:50,918 | INFO     | sum of square deviations: 6103286527.5
[2026-01-08 23:03:33] 2026-01-08 22:02:50,920 | INFO     | sum of deviations: 10817785200.999998
[2026-01-08 23:03:33] 2026-01-08 22:02:50,921 | INFO     | mean x: 1767901497.5
[2026-01-08 23:03:33] 2026-01-08 22:02:50,921 | INFO     | mean y: 2501741.066666667
[2026-01-08 23:03:33] 2026-01-08 22:02:50,921 | INFO     | intersect: -3131019611.7830477
[2026-01-08 23:03:33] 2026-01-08 22:02:50,921 | INFO     | chi2: 0.0003368011555636837
[2026-01-08 23:03:33] 2026-01-08 22:02:50,921 | INFO     | current chi2=0.0003368011555636837 (change=41.412252871265935 %)
[2026-01-08 23:03:33] 2026-01-08 22:02:50,922 | INFO     | sum of square deviations: 5770452380.0
[2026-01-08 23:03:33] 2026-01-08 22:02:50,925 | INFO     | sum of deviations: 9737063451.000002
[2026-01-08 23:03:33] 2026-01-08 22:02:50,925 | INFO     | mean x: 1767901650.0
[2026-01-08 23:03:33] 2026-01-08 22:02:50,925 | INFO     | mean y: 2502235.8113207547
[2026-01-08 23:03:33] 2026-01-08 22:02:50,925 | INFO     | intersect: -2980655653.306828
[2026-01-08 23:03:33] 2026-01-08 22:02:50,926 | INFO     | chi2: 0.00020884034868621118
[2026-01-08 23:03:33] 2026-01-08 22:02:50,926 | INFO     | current chi2=0.00020884034868621118 (change=37.99298332670868 %)
[2026-01-08 23:03:33] 2026-01-08 22:02:50,926 | INFO     | sum of square deviations: 5449944045.0
[2026-01-08 23:03:33] 2026-01-08 22:02:50,929 | INFO     | sum of deviations: 8998764713.0
[2026-01-08 23:03:33] 2026-01-08 22:02:50,929 | INFO     | mean x: 1767901802.5
[2026-01-08 23:03:33] 2026-01-08 22:02:50,929 | INFO     | mean y: 2502586.323076923
[2026-01-08 23:03:33] 2026-01-08 22:02:50,930 | INFO     | intersect: -2916597541.1326528
[2026-01-08 23:03:33] 2026-01-08 22:02:50,930 | INFO     | chi2: 0.0001731016621638952
[2026-01-08 23:03:33] 2026-01-08 22:02:50,930 | INFO     | current chi2=0.0001731016621638952 (change=17.112922261978422 %)
[2026-01-08 23:03:33] 2026-01-08 22:02:50,930 | INFO     | left removable region: 90
[2026-01-08 23:03:33] 2026-01-08 22:02:50,931 | INFO     | sum of square deviations: 2830787960.0
[2026-01-08 23:03:33] 2026-01-08 22:02:50,933 | INFO     | sum of deviations: 4308591040.0
[2026-01-08 23:03:33] 2026-01-08 22:02:50,933 | INFO     | mean x: 1767902992.0
[2026-01-08 23:03:33] 2026-01-08 22:02:50,933 | INFO     | mean y: 2504730.2966507175
[2026-01-08 23:03:33] 2026-01-08 22:02:50,933 | INFO     | intersect: -2688325914.228343
[2026-01-08 23:03:33] 2026-01-08 22:02:50,934 | INFO     | chi2: 0.0001312974960138644
[2026-01-08 23:03:33] 2026-01-08 22:02:50,934 | INFO     | current memory leak: 1.52 B/s (using 209 data points, chi2=0.00)
[2026-01-08 23:03:33] 2026-01-08 22:02:50,934 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-08 23:03:33] 2026-01-08 22:02:50,935 | INFO     | ..............................
[2026-01-08 23:03:33] 2026-01-08 22:02:50,935 | INFO     | . Timing measurements:
[2026-01-08 23:03:33] 2026-01-08 22:02:50,935 | INFO     | . get job = 0 s
[2026-01-08 23:03:33] 2026-01-08 22:02:50,935 | INFO     | . initial setup = 10 s
[2026-01-08 23:03:33] 2026-01-08 22:02:50,935 | INFO     | . payload setup = 152 s
[2026-01-08 23:03:33] 2026-01-08 22:02:50,935 | INFO     | . stage-in = 0 s
[2026-01-08 23:03:33] 2026-01-08 22:02:50,935 | INFO     | . payload execution = 18757 s
[2026-01-08 23:03:33] 2026-01-08 22:02:50,936 | INFO     | . stage-out = 1 s
[2026-01-08 23:03:33] 2026-01-08 22:02:50,936 | INFO     | . log creation = 0 s
[2026-01-08 23:03:33] 2026-01-08 22:02:50,936 | INFO     | ..............................
[2026-01-08 23:03:33] 2026-01-08 22:02:51,504 | INFO     | 
[2026-01-08 23:03:33] 2026-01-08 22:02:51,504 | INFO     | job summary report
[2026-01-08 23:03:33] 2026-01-08 22:02:51,504 | INFO     | --------------------------------------------------
[2026-01-08 23:03:33] 2026-01-08 22:02:51,504 | INFO     | PanDA job id: 6962914227
[2026-01-08 23:03:33] 2026-01-08 22:02:51,505 | INFO     | task id: 47898826
[2026-01-08 23:03:33] 2026-01-08 22:02:51,505 | INFO     | errors: (none)
[2026-01-08 23:03:33] 2026-01-08 22:02:51,505 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 23:03:33] 2026-01-08 22:02:51,505 | INFO     | pilot state: finished 
[2026-01-08 23:03:33] 2026-01-08 22:02:51,505 | INFO     | transexitcode: 0
[2026-01-08 23:03:33] 2026-01-08 22:02:51,505 | INFO     | exeerrorcode: 0
[2026-01-08 23:03:33] 2026-01-08 22:02:51,505 | INFO     | exeerrordiag: 
[2026-01-08 23:03:33] 2026-01-08 22:02:51,505 | INFO     | exitcode: 0
[2026-01-08 23:03:33] 2026-01-08 22:02:51,506 | INFO     | exitmsg: OK
[2026-01-08 23:03:33] 2026-01-08 22:02:51,506 | INFO     | cpuconsumptiontime: 80724 s
[2026-01-08 23:03:33] 2026-01-08 22:02:51,506 | INFO     | nevents: 400
[2026-01-08 23:03:33] 2026-01-08 22:02:51,506 | INFO     | neventsw: 0
[2026-01-08 23:03:33] 2026-01-08 22:02:51,506 | INFO     | pid: 20198
[2026-01-08 23:03:33] 2026-01-08 22:02:51,506 | INFO     | pgrp: 20198
[2026-01-08 23:03:33] 2026-01-08 22:02:51,506 | INFO     | corecount: 8
[2026-01-08 23:03:33] 2026-01-08 22:02:51,506 | INFO     | event service: False
[2026-01-08 23:03:33] 2026-01-08 22:02:51,506 | INFO     | sizes: {0: 2283140, 1: 2283825, 2: 2284024, 12: 2284024, 23: 2284052, 34: 2284080, 45: 2284236, 55: 2284264, 66: 2284292, 77: 2284320, 88: 2284376, 98: 2284684, 10
[2026-01-08 23:03:33] 2026-01-08 22:02:51,507 | INFO     | --------------------------------------------------
[2026-01-08 23:03:33] 2026-01-08 22:02:51,507 | INFO     | 
[2026-01-08 23:03:33] 2026-01-08 22:02:51,507 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-08 23:03:33] 2026-01-08 22:02:51,546 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 23:03:33] 2026-01-08 22:02:51,547 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 23:03:33] 2026-01-08 22:02:51,547 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 23:03:33] 2026-01-08 22:02:51,547 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 23:03:33] 2026-01-08 22:02:51,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 23:03:33] 2026-01-08 22:02:51,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 23:03:33] 2026-01-08 22:02:51,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 23:03:33] 2026-01-08 22:02:51,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 23:03:33] 2026-01-08 22:02:51,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 23:03:33] 2026-01-08 22:02:51,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 23:03:33] 2026-01-08 22:02:51,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 23:03:33] 2026-01-08 22:02:51,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 23:03:33] 2026-01-08 22:02:51,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 23:03:33] 2026-01-08 22:02:51,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 23:03:33] 2026-01-08 22:02:51,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 23:03:33] 2026-01-08 22:02:51,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 23:03:33] 2026-01-08 22:02:51,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 23:03:33] 2026-01-08 22:02:51,549 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 23:03:33] 2026-01-08 22:02:51,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 23:03:33] 2026-01-08 22:02:51,549 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 23:03:33] 2026-01-08 22:02:51,549 | INFO     | job 6962914227 has completed (purged errors)
[2026-01-08 23:03:33] 2026-01-08 22:02:51,549 | INFO     | overall cleanup function is called
[2026-01-08 23:03:33] 2026-01-08 22:02:52,558 | INFO     | --- collectZombieJob: --- 10, [20198]
[2026-01-08 23:03:33] 2026-01-08 22:02:52,558 | INFO     | zombie collector waiting for pid 20198
[2026-01-08 23:03:33] 2026-01-08 22:02:52,558 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 23:03:33] 2026-01-08 22:02:52,559 | INFO     | collected zombie processes
[2026-01-08 23:03:33] 2026-01-08 22:02:52,559 | INFO     | will attempt to kill all subprocesses of pid=20198
[2026-01-08 23:03:33] 2026-01-08 22:02:52,620 | INFO     | process IDs to be killed: [20198] (in reverse order)
[2026-01-08 23:03:33] 2026-01-08 22:02:52,667 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 23:03:33] 2026-01-08 22:02:52,668 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 23:03:33] 2026-01-08 22:02:52,670 | INFO     | did not find any defunct processes belonging to 20198
[2026-01-08 23:03:33] 2026-01-08 22:02:52,671 | INFO     | did not find any defunct processes belonging to 20198
[2026-01-08 23:03:33] 2026-01-08 22:02:52,671 | INFO     | ready for new job
[2026-01-08 23:03:33] 2026-01-08 22:02:52,672 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 23:03:33] 2026-01-08 22:02:52,674 | INFO     | ***************************************
[2026-01-08 23:03:33] 2026-01-08 22:02:52,674 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 23:03:33] 2026-01-08 22:02:52,674 | INFO     | ***************************************
[2026-01-08 23:03:33] 2026-01-08 22:02:52,674 | INFO     | 
[2026-01-08 23:03:33] 2026-01-08 22:02:52,674 | INFO     | pilot is running in a VM
[2026-01-08 23:03:33] 2026-01-08 22:02:52,675 | INFO     | architecture information:
[2026-01-08 23:03:33] 2026-01-08 22:02:52,675 | INFO     | executing command: cat /etc/os-release
[2026-01-08 23:03:33] 2026-01-08 22:02:52,692 | INFO     | cat /etc/os-release:
[2026-01-08 23:03:33] NAME="CentOS Linux"
[2026-01-08 23:03:33] VERSION="7 (Core)"
[2026-01-08 23:03:33] ID="centos"
[2026-01-08 23:03:33] ID_LIKE="rhel fedora"
[2026-01-08 23:03:33] VERSION_ID="7"
[2026-01-08 23:03:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 23:03:33] ANSI_COLOR="0;31"
[2026-01-08 23:03:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 23:03:33] HOME_URL="https://www.centos.org/"
[2026-01-08 23:03:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 23:03:33] 
[2026-01-08 23:03:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 23:03:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 23:03:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 23:03:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 23:03:33] 
[2026-01-08 23:03:33] 2026-01-08 22:02:52,692 | INFO     | ***************************************
[2026-01-08 23:03:33] 2026-01-08 22:02:53,195 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-08 23:03:33] 2026-01-08 22:02:53,213 | INFO     | sufficient remaining disk space (497531486208 B)
[2026-01-08 23:03:33] 2026-01-08 22:02:53,214 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 23:03:33] 2026-01-08 22:02:53,214 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 23:03:33] 2026-01-08 22:02:53,214 | INFO     | update_server=False
[2026-01-08 23:03:33] 2026-01-08 22:02:53,214 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 23:03:33] 2026-01-08 22:02:53,675 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 23:03:33] 2026-01-08 22:02:53,675 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 23:03:33] 2026-01-08 22:02:53,675 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:03:33] 2026-01-08 22:02:53,675 | INFO     | will abort loop
[2026-01-08 23:03:33] 2026-01-08 22:02:53,962 | INFO     | all payload control threads have been joined
[2026-01-08 23:03:33] 2026-01-08 22:02:54,163 | INFO     | all data control threads have been joined
[2026-01-08 23:03:33] 2026-01-08 22:02:54,170 | INFO     | all job control threads have been joined
[2026-01-08 23:03:33] 2026-01-08 22:02:54,220 | INFO     | [job] retrieve thread has finished
[2026-01-08 23:03:33] 2026-01-08 22:02:54,243 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 23:03:33] 2026-01-08 22:02:54,279 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 23:03:33] 2026-01-08 22:02:54,339 | INFO     | [data] copytool_in thread has finished
[2026-01-08 23:03:33] 2026-01-08 22:02:54,681 | INFO     | [job] job monitor thread has finished
[2026-01-08 23:03:33] 2026-01-08 22:02:54,968 | INFO     | [payload] control thread has finished
[2026-01-08 23:03:33] 2026-01-08 22:02:55,012 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 23:03:33] 2026-01-08 22:02:55,074 | INFO     | [job] validate thread has finished
[2026-01-08 23:03:33] 2026-01-08 22:02:55,161 | INFO     | [payload] failed_post thread has finished
[2026-01-08 23:03:33] 2026-01-08 22:02:55,166 | INFO     | [data] control thread has finished
[2026-01-08 23:03:33] 2026-01-08 22:02:55,171 | INFO     | [job] control thread has finished
[2026-01-08 23:03:33] 2026-01-08 22:02:55,444 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 23:03:33] 2026-01-08 22:02:55,484 | INFO     | [payload] validate_post thread has finished
[2026-01-08 23:03:33] 2026-01-08 22:02:55,510 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 23:03:33] 2026-01-08 22:02:56,070 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:03:33] 2026-01-08 22:02:56,249 | INFO     | [data] copytool_out thread has finished
[2026-01-08 23:03:33] 2026-01-08 22:02:56,359 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 23:03:33] 2026-01-08 22:02:57,076 | INFO     | [job] queue monitor thread has finished
[2026-01-08 23:03:33] 2026-01-08 22:03:00,366 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 23:03:33] 2026-01-08 22:03:23,849 | INFO     | PID=13748 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 23:03:33] 2026-01-08 22:03:23,850 | INFO     | .. there are 2 such processes running
[2026-01-08 23:03:33] 2026-01-08 22:03:23,850 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 23:03:33] 2026-01-08 22:03:23,851 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 23:03:33] 2026-01-08 22:03:23,851 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 23:03:33] 2026-01-08 22:03:27,871 | INFO     | [monitor] cgroup control has ended
[2026-01-08 23:03:33] 2026-01-08 22:03:28,231 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140526151837504)>', '<ExcThread(monitor, started 140525424342784)>']
[2026-01-08 23:03:33] 2026-01-08 22:03:28,869 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 23:03:33] 2026-01-08 22:03:28,869 | INFO     | [monitor] control thread has ended
[2026-01-08 23:03:33] 2026-01-08 22:03:33,257 | INFO     | all workflow threads have been joined
[2026-01-08 23:03:33] 2026-01-08 22:03:33,257 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 23:03:33] 2026-01-08 22:03:33,258 | INFO     | traces error code: 0
[2026-01-08 23:03:33] 2026-01-08 22:03:33,258 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 23:03:33] 2026-01-08 22:03:33,404 [wrapper] ==== pilot stdout END ====
[2026-01-08 23:03:33] 2026-01-08 22:03:33,409 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 23:03:33] 2026-01-08 22:03:33,413 [wrapper] pilotpid: 13748
[2026-01-08 23:03:33] 2026-01-08 22:03:33,418 [wrapper] Pilot exit status: 0
[2026-01-08 23:03:33] 2026-01-08 22:03:33,443 [wrapper] pandaids: 6962914227
[2026-01-08 23:03:33] 2026-01-08 22:03:33,495 [wrapper] cleanup supervisor_pilot 32070 13749
[2026-01-08 23:03:33] 2026-01-08 22:03:33,501 [wrapper] Test setup, not cleaning
[2026-01-08 23:03:33] 2026-01-08 22:03:33,506 [wrapper] apfmon messages muted
[2026-01-08 23:03:33] 2026-01-08 22:03:33,514 [wrapper] ==== wrapper stdout END ====
[2026-01-08 23:03:33] 2026-01-08 22:03:33,521 [wrapper] ==== wrapper stderr END ====
[2026-01-08 23:03:33]  *** Error codes and diagnostics ***
[2026-01-08 23:03:33]     "exeErrorCode": 0,
[2026-01-08 23:03:33]     "exeErrorDiag": "",
[2026-01-08 23:03:33]     "pilotErrorCode": 0,
[2026-01-08 23:03:33]     "pilotErrorDiag": "",
[2026-01-08 23:03:33]  *** Listing of results directory ***
[2026-01-08 23:03:33] total 445376
[2026-01-08 23:03:33] -rw-r--r--. 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-08 23:03:33] -rwx------. 1 boinc boinc     36322 Jan  8 09:01 runpilot2-wrapper.sh
[2026-01-08 23:03:33] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:01 queuedata.json
[2026-01-08 23:03:33] -rw-r--r--. 1 boinc boinc       100 Jan  8 17:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 23:03:33] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 17:39 run_atlas
[2026-01-08 23:03:33] -rw-r--r--. 1 boinc boinc       105 Jan  8 17:39 job.xml
[2026-01-08 23:03:33] -rw-r--r--. 1 boinc boinc      6390 Jan  8 17:39 init_data.xml
[2026-01-08 23:03:33] -rw-r--r--. 2 boinc boinc 225453649 Jan  8 17:39 EVNT.47898824._000315.pool.root.1
[2026-01-08 23:03:33] -rw-r--r--. 2 boinc boinc     15847 Jan  8 17:39 start_atlas.sh
[2026-01-08 23:03:33] drwxrwx--x. 2 boinc boinc        68 Jan  8 17:39 shared
[2026-01-08 23:03:33] -rw-r--r--. 2 boinc boinc    592396 Jan  8 17:39 input.tar.gz
[2026-01-08 23:03:33] -rw-r--r--. 1 boinc boinc         0 Jan  8 17:39 boinc_lockfile
[2026-01-08 23:03:33] -rw-r--r--. 1 boinc boinc      2518 Jan  8 17:39 pandaJob.out
[2026-01-08 23:03:33] -rw-------. 1 boinc boinc    989837 Jan  8 17:43 agis_schedconf.cvmfs.json
[2026-01-08 23:03:33] drwx------. 5 boinc boinc      4096 Jan  8 17:43 pilot3
[2026-01-08 23:03:33] -rw-------. 1 boinc boinc 220505171 Jan  8 23:01 HITS.47898826._017444.pool.root.1
[2026-01-08 23:03:33] -rw-r--r--. 1 boinc boinc       531 Jan  8 23:02 boinc_task_state.xml
[2026-01-08 23:03:33] -rw-------. 1 boinc boinc      1020 Jan  8 23:02 memory_monitor_summary.json
[2026-01-08 23:03:33] -rw-------. 1 boinc boinc   1516240 Jan  8 23:02 agis_ddmendpoints.agis.ALL.json
[2026-01-08 23:03:33] -rw-------. 1 boinc boinc    531305 Jan  8 23:02 log.47898826._017444.job.log.tgz.1
[2026-01-08 23:03:33] -rw-------. 1 boinc boinc      7780 Jan  8 23:02 heartbeat.json
[2026-01-08 23:03:33] -rw-r--r--. 1 boinc boinc      8192 Jan  8 23:03 boinc_mmap_file
[2026-01-08 23:03:33] -rw-r--r--. 1 boinc boinc        28 Jan  8 23:03 wrapper_checkpoint.txt
[2026-01-08 23:03:33] -rw-------. 1 boinc boinc        95 Jan  8 23:03 pilot_heartbeat.json
[2026-01-08 23:03:33] -rw-------. 1 boinc boinc      5070 Jan  8 23:03 pilotlog.txt
[2026-01-08 23:03:33] -rw-------. 1 boinc boinc   2568981 Jan  8 23:03 log.47898826._017444.job.log.1
[2026-01-08 23:03:33] -rw-------. 1 boinc boinc       357 Jan  8 23:03 output.list
[2026-01-08 23:03:33] -rw-r--r--. 1 boinc boinc       620 Jan  8 23:03 runtime_log
[2026-01-08 23:03:33] -rw-------. 1 boinc boinc   3123200 Jan  8 23:03 result.tar.gz
[2026-01-08 23:03:33] -rw-r--r--. 1 boinc boinc      8817 Jan  8 23:03 runtime_log.err
[2026-01-08 23:03:33] -rw-------. 1 boinc boinc       656 Jan  8 23:03 OETLDmG8zx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQHeKDmauyDZm.diag
[2026-01-08 23:03:33] -rw-r--r--. 1 boinc boinc     20748 Jan  8 23:03 stderr.txt
[2026-01-08 23:03:33] HITS file was successfully produced:
[2026-01-08 23:03:33] -rw-------. 1 boinc boinc 220505171 Jan  8 23:01 shared/HITS.pool.root.1
[2026-01-08 23:03:33]  *** Contents of shared directory: ***
[2026-01-08 23:03:33] total 439160
[2026-01-08 23:03:33] -rw-r--r--. 2 boinc boinc 225453649 Jan  8 17:39 ATLAS.root_0
[2026-01-08 23:03:33] -rw-r--r--. 2 boinc boinc     15847 Jan  8 17:39 start_atlas.sh
[2026-01-08 23:03:33] -rw-r--r--. 2 boinc boinc    592396 Jan  8 17:39 input.tar.gz
[2026-01-08 23:03:33] -rw-------. 1 boinc boinc 220505171 Jan  8 23:01 HITS.pool.root.1
[2026-01-08 23:03:33] -rw-------. 1 boinc boinc   3123200 Jan  8 23:03 result.tar.gz
23:03:35 (9987): run_atlas exited; CPU time 80918.247694
23:03:35 (9987): called boinc_finish(0)

</stderr_txt>
]]>

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