Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:37:06 (1587163): wrapper (7.7.26015): starting
11:37:06 (1587163): wrapper: running run_atlas (--nthreads 9)
[2026-01-08 11:37:06] Arguments: --nthreads 9
[2026-01-08 11:37:06] Threads: 9
[2026-01-08 11:37:06] Checking for CVMFS
[2026-01-08 11:37:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 11:37:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 11:37:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 11:37:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 11:37:07] 2.13.3.0 9428 90523 325804 154914 2 359 11488149 18491393 21656 16776704 0 401162997 99.352 646643848 33320 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 11:37:07] CVMFS is ok
[2026-01-08 11:37:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 11:37:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 11:37:07] Further information can be found at the LHC@home message board.
[2026-01-08 11:37:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 11:37:07] Checking for apptainer binary...
[2026-01-08 11:37:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 11:37:07] Running /usr/bin/apptainer --version
[2026-01-08 11:37:07] apptainer version 1.4.5-2.el9
[2026-01-08 11:37:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 11:37:08] c-8-38.aglt2.org
[2026-01-08 11:37:08] apptainer works
[2026-01-08 11:37:08] Set ATHENA_PROC_NUMBER=9
[2026-01-08 11:37:08] Set ATHENA_CORE_NUMBER=9
[2026-01-08 11:37:08] Starting ATLAS job with PandaID=6962913860
[2026-01-08 11:37:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 19:48:39]  *** The last 200 lines of the pilot log: ***
[2026-01-08 19:48:39] 2026-01-09 00:47:32,684 | INFO     | time since job start (29399s) is within the limit (174528.0s)
[2026-01-08 19:48:39] 2026-01-09 00:47:34,232 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 19:48:39] 2026-01-09 00:47:34,265 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.2461749999998
[2026-01-08 19:48:39] 2026-01-09 00:47:34,326 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962913860/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 19:48:39] 2026-01-09 00:47:34,343 | INFO     | extracted standard info from prmon json
[2026-01-08 19:48:39] 2026-01-09 00:47:34,343 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 19:48:39] 2026-01-09 00:47:34,343 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 19:48:39] 2026-01-09 00:47:34,344 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 19:48:39] 2026-01-09 00:47:34,344 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 19:48:39] 2026-01-09 00:47:34,353 | INFO     | fitting pss+swap vs Time
[2026-01-08 19:48:39] 2026-01-09 00:47:34,354 | INFO     | sum of square deviations: 34507885236.67778
[2026-01-08 19:48:39] 2026-01-09 00:47:34,359 | INFO     | sum of deviations: 9386393832.303543
[2026-01-08 19:48:39] 2026-01-09 00:47:34,360 | INFO     | mean x: 1767904941.4428275
[2026-01-08 19:48:39] 2026-01-09 00:47:34,360 | INFO     | mean y: 2577433.2474012473
[2026-01-08 19:48:39] 2026-01-09 00:47:34,360 | INFO     | intersect: -478305470.02654946
[2026-01-08 19:48:39] 2026-01-09 00:47:34,361 | INFO     | chi2: 2.1608940090746014
[2026-01-08 19:48:39] 2026-01-09 00:47:34,362 | INFO     | sum of square deviations: 33443069898.982998
[2026-01-08 19:48:39] 2026-01-09 00:47:34,367 | INFO     | sum of deviations: 40768506994.029465
[2026-01-08 19:48:39] 2026-01-09 00:47:34,367 | INFO     | mean x: 1767904788.9537816
[2026-01-08 19:48:39] 2026-01-09 00:47:34,368 | INFO     | mean y: 2581889.455882353
[2026-01-08 19:48:39] 2026-01-09 00:47:34,368 | INFO     | intersect: -2152568309.7018876
[2026-01-08 19:48:39] 2026-01-09 00:47:34,369 | INFO     | chi2: 1.4533473328575095
[2026-01-08 19:48:39] 2026-01-09 00:47:34,369 | INFO     | current chi2=1.4533473328575095 (change=32.74323836549935 %)
[2026-01-08 19:48:39] 2026-01-09 00:47:34,370 | INFO     | sum of square deviations: 32400393903.172054
[2026-01-08 19:48:39] 2026-01-09 00:47:34,375 | INFO     | sum of deviations: 40188762666.7452
[2026-01-08 19:48:39] 2026-01-09 00:47:34,375 | INFO     | mean x: 1767904636.4649682
[2026-01-08 19:48:39] 2026-01-09 00:47:34,375 | INFO     | mean y: 2581804.6815286623
[2026-01-08 19:48:39] 2026-01-09 00:47:34,376 | INFO     | intersect: -2190289679.062166
[2026-01-08 19:48:39] 2026-01-09 00:47:34,376 | INFO     | chi2: 1.4535034418918882
[2026-01-08 19:48:39] 2026-01-09 00:47:34,376 | INFO     | current chi2=1.4535034418918882 (change=-0.01074134385148986 %)
[2026-01-08 19:48:39] 2026-01-09 00:47:34,377 | INFO     | right removable region: 470
[2026-01-08 19:48:39] 2026-01-09 00:47:34,377 | INFO     | sum of square deviations: 33442704751.159718
[2026-01-08 19:48:39] 2026-01-09 00:47:34,383 | INFO     | sum of deviations: -58715864695.462234
[2026-01-08 19:48:39] 2026-01-09 00:47:34,383 | INFO     | mean x: 1767905093.9579833
[2026-01-08 19:48:39] 2026-01-09 00:47:34,383 | INFO     | mean y: 2587129.9768907563
[2026-01-08 19:48:39] 2026-01-09 00:47:34,383 | INFO     | intersect: 3106524956.287297
[2026-01-08 19:48:39] 2026-01-09 00:47:34,384 | INFO     | chi2: 0.8257556822080483
[2026-01-08 19:48:39] 2026-01-09 00:47:34,384 | INFO     | current chi2=0.8257556822080483 (change=61.78638661867194 %)
[2026-01-08 19:48:39] 2026-01-09 00:47:34,385 | INFO     | sum of square deviations: 32399693253.36307
[2026-01-08 19:48:39] 2026-01-09 00:47:34,390 | INFO     | sum of deviations: -59818908043.611435
[2026-01-08 19:48:39] 2026-01-09 00:47:34,391 | INFO     | mean x: 1767905246.4713376
[2026-01-08 19:48:39] 2026-01-09 00:47:34,391 | INFO     | mean y: 2587283.7324840766
[2026-01-08 19:48:39] 2026-01-09 00:47:34,391 | INFO     | intersect: 3266635512.260386
[2026-01-08 19:48:39] 2026-01-09 00:47:34,392 | INFO     | chi2: 0.8105640722022733
[2026-01-08 19:48:39] 2026-01-09 00:47:34,392 | INFO     | current chi2=0.8105640722022733 (change=1.8397221276338063 %)
[2026-01-08 19:48:39] 2026-01-09 00:47:34,392 | INFO     | left removable region: 20
[2026-01-08 19:48:39] 2026-01-09 00:47:34,393 | INFO     | sum of square deviations: 28256401598.820034
[2026-01-08 19:48:39] 2026-01-09 00:47:34,398 | INFO     | sum of deviations: -10001631445.639996
[2026-01-08 19:48:39] 2026-01-09 00:47:34,398 | INFO     | mean x: 1767905216.02
[2026-01-08 19:48:39] 2026-01-09 00:47:34,398 | INFO     | mean y: 2589083.6266666665
[2026-01-08 19:48:39] 2026-01-09 00:47:34,398 | INFO     | intersect: 628356534.5746665
[2026-01-08 19:48:39] 2026-01-09 00:47:34,399 | INFO     | chi2: 0.0734271331918918
[2026-01-08 19:48:39] 2026-01-09 00:47:34,399 | INFO     | current memory leak: -0.35 B/s (using 450 data points, chi2=0.07)
[2026-01-08 19:48:39] 2026-01-09 00:47:34,400 | INFO     | could have reported an average CPU frequency of 2600 MHz (19 samples)
[2026-01-08 19:48:39] 2026-01-09 00:47:34,400 | INFO     | ..............................
[2026-01-08 19:48:39] 2026-01-09 00:47:34,400 | INFO     | . Timing measurements:
[2026-01-08 19:48:39] 2026-01-09 00:47:34,400 | INFO     | . get job = 0 s
[2026-01-08 19:48:39] 2026-01-09 00:47:34,400 | INFO     | . initial setup = 4 s
[2026-01-08 19:48:39] 2026-01-09 00:47:34,401 | INFO     | . payload setup = 8 s
[2026-01-08 19:48:39] 2026-01-09 00:47:34,401 | INFO     | . stage-in = 0 s
[2026-01-08 19:48:39] 2026-01-09 00:47:34,401 | INFO     | . payload execution = 29325 s
[2026-01-08 19:48:39] 2026-01-09 00:47:34,401 | INFO     | . stage-out = 3 s
[2026-01-08 19:48:39] 2026-01-09 00:47:34,401 | INFO     | . log creation = 0 s
[2026-01-08 19:48:39] 2026-01-09 00:47:34,401 | INFO     | ..............................
[2026-01-08 19:48:39] 2026-01-09 00:47:34,699 | INFO     | time since job start (29401s) is within the limit (174528.0s)
[2026-01-08 19:48:39] 2026-01-09 00:47:34,926 | INFO     | 
[2026-01-08 19:48:39] 2026-01-09 00:47:34,926 | INFO     | job summary report
[2026-01-08 19:48:39] 2026-01-09 00:47:34,926 | INFO     | --------------------------------------------------
[2026-01-08 19:48:39] 2026-01-09 00:47:34,926 | INFO     | PanDA job id: 6962913860
[2026-01-08 19:48:39] 2026-01-09 00:47:34,926 | INFO     | task id: 47898826
[2026-01-08 19:48:39] 2026-01-09 00:47:34,926 | INFO     | errors: (none)
[2026-01-08 19:48:39] 2026-01-09 00:47:34,926 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 19:48:39] 2026-01-09 00:47:34,927 | INFO     | pilot state: finished 
[2026-01-08 19:48:39] 2026-01-09 00:47:34,927 | INFO     | transexitcode: 0
[2026-01-08 19:48:39] 2026-01-09 00:47:34,927 | INFO     | exeerrorcode: 0
[2026-01-08 19:48:39] 2026-01-09 00:47:34,927 | INFO     | exeerrordiag: 
[2026-01-08 19:48:39] 2026-01-09 00:47:34,927 | INFO     | exitcode: 0
[2026-01-08 19:48:39] 2026-01-09 00:47:34,927 | INFO     | exitmsg: OK
[2026-01-08 19:48:39] 2026-01-09 00:47:34,927 | INFO     | cpuconsumptiontime: 70760 s
[2026-01-08 19:48:39] 2026-01-09 00:47:34,927 | INFO     | nevents: 400
[2026-01-08 19:48:39] 2026-01-09 00:47:34,927 | INFO     | neventsw: 0
[2026-01-08 19:48:39] 2026-01-09 00:47:34,927 | INFO     | pid: 1606854
[2026-01-08 19:48:39] 2026-01-09 00:47:34,928 | INFO     | pgrp: 1606854
[2026-01-08 19:48:39] 2026-01-09 00:47:34,928 | INFO     | corecount: 9
[2026-01-08 19:48:39] 2026-01-09 00:47:34,928 | INFO     | event service: False
[2026-01-08 19:48:39] 2026-01-09 00:47:34,928 | INFO     | sizes: {0: 2283739, 1: 2283823, 2: 2284022, 13: 2284340, 23: 2284340, 29339: 2321464, 29340: 2321591, 29344: 2330701, 29370: 2330839}
[2026-01-08 19:48:39] 2026-01-09 00:47:34,928 | INFO     | --------------------------------------------------
[2026-01-08 19:48:39] 2026-01-09 00:47:34,928 | INFO     | 
[2026-01-08 19:48:39] 2026-01-09 00:47:34,967 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 19:48:39] 2026-01-09 00:47:35,235 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 19:48:39] 2026-01-09 00:47:35,235 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 19:48:39] 2026-01-09 00:47:35,236 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 19:48:39] 2026-01-09 00:47:35,236 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 19:48:39] 2026-01-09 00:47:35,236 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 19:48:39] 2026-01-09 00:47:35,236 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 19:48:39] 2026-01-09 00:47:35,236 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 19:48:39] 2026-01-09 00:47:35,236 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 19:48:39] 2026-01-09 00:47:35,236 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 19:48:39] 2026-01-09 00:47:35,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 19:48:39] 2026-01-09 00:47:35,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 19:48:39] 2026-01-09 00:47:35,237 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 19:48:39] 2026-01-09 00:47:35,237 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 19:48:39] 2026-01-09 00:47:35,237 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 19:48:39] 2026-01-09 00:47:35,237 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 19:48:39] 2026-01-09 00:47:35,237 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 19:48:39] 2026-01-09 00:47:35,237 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 19:48:39] 2026-01-09 00:47:35,237 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 19:48:39] 2026-01-09 00:47:35,237 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 19:48:39] 2026-01-09 00:47:35,238 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 19:48:39] 2026-01-09 00:47:35,238 | INFO     | job 6962913860 has completed (purged errors)
[2026-01-08 19:48:39] 2026-01-09 00:47:35,238 | INFO     | overall cleanup function is called
[2026-01-08 19:48:39] 2026-01-09 00:47:36,289 | INFO     | --- collectZombieJob: --- 10, [1606854]
[2026-01-08 19:48:39] 2026-01-09 00:47:36,289 | INFO     | zombie collector waiting for pid 1606854
[2026-01-08 19:48:39] 2026-01-09 00:47:36,289 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 19:48:39] 2026-01-09 00:47:36,289 | INFO     | collected zombie processes
[2026-01-08 19:48:39] 2026-01-09 00:47:36,289 | INFO     | will attempt to kill all subprocesses of pid=1606854
[2026-01-08 19:48:39] 2026-01-09 00:47:37,404 | INFO     | process IDs to be killed: [1606854] (in reverse order)
[2026-01-08 19:48:39] 2026-01-09 00:47:38,000 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 19:48:39] 2026-01-09 00:47:38,008 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 19:48:39] 2026-01-09 00:47:38,057 | INFO     | did not find any defunct processes belonging to 1606854
[2026-01-08 19:48:39] 2026-01-09 00:47:38,072 | INFO     | did not find any defunct processes belonging to 1606854
[2026-01-08 19:48:39] 2026-01-09 00:47:38,073 | INFO     | ready for new job
[2026-01-08 19:48:39] 2026-01-09 00:47:38,073 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 19:48:39] 2026-01-09 00:47:38,085 | INFO     | ***************************************
[2026-01-08 19:48:39] 2026-01-09 00:47:38,085 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 19:48:39] 2026-01-09 00:47:38,085 | INFO     | ***************************************
[2026-01-08 19:48:39] 2026-01-09 00:47:38,085 | INFO     | 
[2026-01-08 19:48:39] 2026-01-09 00:47:38,087 | INFO     | architecture information:
[2026-01-08 19:48:39] 2026-01-09 00:47:38,088 | INFO     | executing command: cat /etc/os-release
[2026-01-08 19:48:39] 2026-01-09 00:47:38,116 | INFO     | cat /etc/os-release:
[2026-01-08 19:48:39] NAME="CentOS Linux"
[2026-01-08 19:48:39] VERSION="7 (Core)"
[2026-01-08 19:48:39] ID="centos"
[2026-01-08 19:48:39] ID_LIKE="rhel fedora"
[2026-01-08 19:48:39] VERSION_ID="7"
[2026-01-08 19:48:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 19:48:39] ANSI_COLOR="0;31"
[2026-01-08 19:48:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 19:48:39] HOME_URL="https://www.centos.org/"
[2026-01-08 19:48:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 19:48:39] 
[2026-01-08 19:48:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 19:48:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 19:48:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 19:48:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 19:48:39] 
[2026-01-08 19:48:39] 2026-01-09 00:47:38,117 | INFO     | ***************************************
[2026-01-08 19:48:39] 2026-01-09 00:47:38,621 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 19:48:39] 2026-01-09 00:47:38,749 | INFO     | sufficient remaining disk space (95719260160 B)
[2026-01-08 19:48:39] 2026-01-09 00:47:38,749 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 19:48:39] 2026-01-09 00:47:38,750 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 19:48:39] 2026-01-09 00:47:38,751 | INFO     | update_server=False
[2026-01-08 19:48:39] 2026-01-09 00:47:38,751 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 19:48:39] 2026-01-09 00:47:38,751 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 19:48:39] 2026-01-09 00:47:38,752 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 19:48:39] 2026-01-09 00:47:38,752 | INFO     | aborting loop
[2026-01-08 19:48:39] 2026-01-09 00:47:38,912 | INFO     | all data control threads have been joined
[2026-01-08 19:48:39] 2026-01-09 00:47:39,057 | INFO     | all payload control threads have been joined
[2026-01-08 19:48:39] 2026-01-09 00:47:39,403 | INFO     | all job control threads have been joined
[2026-01-08 19:48:39] 2026-01-09 00:47:39,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 19:48:39] 2026-01-09 00:47:39,756 | INFO     | [job] retrieve thread has finished
[2026-01-08 19:48:39] 2026-01-09 00:47:39,758 | INFO     | [job] job monitor thread has finished
[2026-01-08 19:48:39] 2026-01-09 00:47:39,918 | INFO     | [data] control thread has finished
[2026-01-08 19:48:39] 2026-01-09 00:47:40,063 | INFO     | [payload] control thread has finished
[2026-01-08 19:48:39] 2026-01-09 00:47:40,189 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 19:48:39] 2026-01-09 00:47:40,294 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 19:48:39] 2026-01-09 00:47:40,345 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 19:48:39] 2026-01-09 00:47:40,409 | INFO     | [job] control thread has finished
[2026-01-08 19:48:39] 2026-01-09 00:47:40,484 | INFO     | [payload] failed_post thread has finished
[2026-01-08 19:48:39] 2026-01-09 00:47:40,651 | INFO     | [payload] validate_post thread has finished
[2026-01-08 19:48:39] 2026-01-09 00:47:40,716 | INFO     | [job] queue monitor thread has finished
[2026-01-08 19:48:39] 2026-01-09 00:47:40,765 | INFO     | [data] copytool_out thread has finished
[2026-01-08 19:48:39] 2026-01-09 00:47:40,951 | INFO     | [data] copytool_in thread has finished
[2026-01-08 19:48:39] 2026-01-09 00:47:40,955 | INFO     | [job] validate thread has finished
[2026-01-08 19:48:39] 2026-01-09 00:47:41,245 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 19:48:39] 2026-01-09 00:47:41,297 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 19:48:39] 2026-01-09 00:47:45,306 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 19:48:39] 2026-01-09 00:48:09,981 | INFO     | PID=1593798 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 19:48:39] 2026-01-09 00:48:09,982 | INFO     | .. there are 32 such processes running
[2026-01-08 19:48:39] 2026-01-09 00:48:09,982 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 19:48:39] 2026-01-09 00:48:09,982 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 19:48:39] 2026-01-09 00:48:09,982 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 19:48:39] 2026-01-09 00:48:31,121 | INFO     | [monitor] cgroup control has ended
[2026-01-08 19:48:39] 2026-01-09 00:48:33,111 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140091134863168)>', '<ExcThread(monitor, started 140090282075904)>']
[2026-01-08 19:48:39] 2026-01-09 00:48:33,191 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 19:48:39] 2026-01-09 00:48:33,191 | INFO     | [monitor] control thread has ended
[2026-01-08 19:48:39] 2026-01-09 00:48:38,137 | INFO     | all workflow threads have been joined
[2026-01-08 19:48:39] 2026-01-09 00:48:38,137 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 19:48:39] 2026-01-09 00:48:38,137 | INFO     | traces error code: 0
[2026-01-08 19:48:39] 2026-01-09 00:48:38,138 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 19:48:39] 2026-01-09 00:48:38,600 [wrapper] ==== pilot stdout END ====
[2026-01-08 19:48:39] 2026-01-09 00:48:38,639 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 19:48:39] 2026-01-09 00:48:38,693 [wrapper] pilotpid: 1593798
[2026-01-08 19:48:39] 2026-01-09 00:48:38,712 [wrapper] Pilot exit status: 0
[2026-01-08 19:48:39] 2026-01-09 00:48:38,810 [wrapper] pandaids: 6962913860
[2026-01-08 19:48:39] 2026-01-09 00:48:38,975 [wrapper] cleanup supervisor_pilot 3585778 1593799
[2026-01-08 19:48:39] 2026-01-09 00:48:38,983 [wrapper] Test setup, not cleaning
[2026-01-08 19:48:39] 2026-01-09 00:48:39,002 [wrapper] apfmon messages muted
[2026-01-08 19:48:39] 2026-01-09 00:48:39,030 [wrapper] ==== wrapper stdout END ====
[2026-01-08 19:48:39] 2026-01-09 00:48:39,042 [wrapper] ==== wrapper stderr END ====
[2026-01-08 19:48:39]  *** Error codes and diagnostics ***
[2026-01-08 19:48:39]     "exeErrorCode": 0,
[2026-01-08 19:48:39]     "exeErrorDiag": "",
[2026-01-08 19:48:39]     "pilotErrorCode": 0,
[2026-01-08 19:48:39]     "pilotErrorDiag": "",
[2026-01-08 19:48:39]  *** Listing of results directory ***
[2026-01-08 19:48:39] total 444252
[2026-01-08 19:48:39] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-08 19:48:39] -rwx------. 1 boincer umatlas     36322 Jan  8 03:00 runpilot2-wrapper.sh
[2026-01-08 19:48:39] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:01 queuedata.json
[2026-01-08 19:48:39] -rw-r--r--. 1 boincer umatlas       100 Jan  8 11:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 19:48:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 11:37 run_atlas
[2026-01-08 19:48:39] -rw-r--r--. 1 boincer umatlas       105 Jan  8 11:37 job.xml
[2026-01-08 19:48:39] -rw-r--r--. 2 boincer umatlas 221750112 Jan  8 11:37 EVNT.47898824._000306.pool.root.1
[2026-01-08 19:48:39] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 11:37 shared
[2026-01-08 19:48:39] -rw-r--r--. 2 boincer umatlas    592395 Jan  8 11:37 input.tar.gz
[2026-01-08 19:48:39] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 11:37 start_atlas.sh
[2026-01-08 19:48:39] -rw-r--r--. 1 boincer umatlas         0 Jan  8 11:37 boinc_lockfile
[2026-01-08 19:48:39] -rw-r--r--. 1 boincer umatlas      2517 Jan  8 11:37 pandaJob.out
[2026-01-08 19:48:39] -rw-------. 1 boincer umatlas        57 Jan  8 11:37 setup.sh.local
[2026-01-08 19:48:39] -rw-------. 1 boincer umatlas    989837 Jan  8 11:37 agis_schedconf.cvmfs.json
[2026-01-08 19:48:39] drwx------. 5 boincer umatlas      4096 Jan  8 11:37 pilot3
[2026-01-08 19:48:39] -rw-------. 1 boincer umatlas 221260154 Jan  8 19:46 HITS.47898826._017200.pool.root.1
[2026-01-08 19:48:39] -rw-r--r--. 1 boincer umatlas       531 Jan  8 19:46 boinc_task_state.xml
[2026-01-08 19:48:39] -rw-------. 1 boincer umatlas      1044 Jan  8 19:46 memory_monitor_summary.json
[2026-01-08 19:48:39] -rw-------. 1 boincer umatlas   1516240 Jan  8 19:47 agis_ddmendpoints.agis.ALL.json
[2026-01-08 19:48:39] -rw-------. 1 boincer umatlas    627185 Jan  8 19:47 log.47898826._017200.job.log.tgz.1
[2026-01-08 19:48:39] -rw-------. 1 boincer umatlas        95 Jan  8 19:47 pilot_heartbeat.json
[2026-01-08 19:48:39] -rw-------. 1 boincer umatlas      7819 Jan  8 19:47 heartbeat.json
[2026-01-08 19:48:39] -rw-r--r--. 1 boincer umatlas      6660 Jan  8 19:48 init_data.xml
[2026-01-08 19:48:39] -rw-r--r--. 1 boincer umatlas        28 Jan  8 19:48 wrapper_checkpoint.txt
[2026-01-08 19:48:39] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 19:48 boinc_mmap_file
[2026-01-08 19:48:39] -rw-------. 1 boincer umatlas      4824 Jan  8 19:48 pilotlog.txt
[2026-01-08 19:48:39] -rw-------. 1 boincer umatlas   3362908 Jan  8 19:48 log.47898826._017200.job.log.1
[2026-01-08 19:48:39] -rw-------. 1 boincer umatlas       357 Jan  8 19:48 output.list
[2026-01-08 19:48:39] -rw-r--r--. 1 boincer umatlas       620 Jan  8 19:48 runtime_log
[2026-01-08 19:48:39] -rw-------. 1 boincer umatlas   4014080 Jan  8 19:48 result.tar.gz
[2026-01-08 19:48:39] -rw-r--r--. 1 boincer umatlas      9333 Jan  8 19:48 runtime_log.err
[2026-01-08 19:48:39] -rw-------. 1 boincer umatlas       656 Jan  8 19:48 7dLODmv7zx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6EeKDm89k5Jo.diag
[2026-01-08 19:48:39] -rw-r--r--. 1 boincer umatlas     21201 Jan  8 19:48 stderr.txt
[2026-01-08 19:48:39] HITS file was successfully produced:
[2026-01-08 19:48:39] -rw-------. 1 boincer umatlas 221260154 Jan  8 19:46 shared/HITS.pool.root.1
[2026-01-08 19:48:39]  *** Contents of shared directory: ***
[2026-01-08 19:48:39] total 437152
[2026-01-08 19:48:39] -rw-r--r--. 2 boincer umatlas 221750112 Jan  8 11:37 ATLAS.root_0
[2026-01-08 19:48:39] -rw-r--r--. 2 boincer umatlas    592395 Jan  8 11:37 input.tar.gz
[2026-01-08 19:48:39] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 11:37 start_atlas.sh
[2026-01-08 19:48:39] -rw-------. 1 boincer umatlas 221260154 Jan  8 19:46 HITS.pool.root.1
[2026-01-08 19:48:39] -rw-------. 1 boincer umatlas   4014080 Jan  8 19:48 result.tar.gz
19:48:40 (1587163): run_atlas exited; CPU time 71788.981911
19:48:40 (1587163): called boinc_finish(0)

</stderr_txt>
]]>

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