Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:51:08 (3240639): wrapper (7.7.26015): starting
05:51:08 (3240639): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 05:51:08] Arguments: --nthreads 8
[2026-01-08 05:51:08] Threads: 8
[2026-01-08 05:51:08] Checking for CVMFS
[2026-01-08 05:51:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 05:51:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 05:51:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 05:51:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 05:51:08] 2.13.3.0 8593 18215 241004 154901 2 489 34898531 39288832 9421 16776704 0 15772379 99.760 29234607 32412 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 05:51:08] CVMFS is ok
[2026-01-08 05:51:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 05:51:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 05:51:08] Further information can be found at the LHC@home message board.
[2026-01-08 05:51:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 05:51:08] Checking for apptainer binary...
[2026-01-08 05:51:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 05:51:08] Running /usr/bin/apptainer --version
[2026-01-08 05:51:08] apptainer version 1.4.5-2.el9
[2026-01-08 05:51:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 05:51:08] c-211-25.aglt2.org
[2026-01-08 05:51:08] apptainer works
[2026-01-08 05:51:08] Set ATHENA_PROC_NUMBER=8
[2026-01-08 05:51:08] Set ATHENA_CORE_NUMBER=8
[2026-01-08 05:51:08] Starting ATLAS job with PandaID=6962913761
[2026-01-08 05:51:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:20:04 (3240639): BOINC client no longer exists - exiting
11:20:04 (3240639): timer handler: client dead, exiting
11:27:50 (1991239): wrapper (7.7.26015): starting
11:27:50 (1991239): wrapper: running run_atlas (--nthreads 9)
[2026-01-08 11:27:50] Arguments: --nthreads 9
[2026-01-08 11:27:50] Threads: 9
[2026-01-08 11:27:50] This job has been restarted, cleaning up previous attempt
[2026-01-08 11:27:50] Checking for CVMFS
[2026-01-08 11:27:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 11:27:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 11:27:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 11:27:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 11:27:51] 2.13.3.0 8593 18552 227836 154914 2 62 21082153 39288832 8233 16776704 0 16762130 99.758 30305135 31530 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 11:27:51] CVMFS is ok
[2026-01-08 11:27:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 11:27:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 11:27:51] Further information can be found at the LHC@home message board.
[2026-01-08 11:27:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 11:27:51] Checking for apptainer binary...
[2026-01-08 11:27:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 11:27:51] Running /usr/bin/apptainer --version
[2026-01-08 11:27:51] apptainer version 1.4.5-2.el9
[2026-01-08 11:27:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 11:27:51] c-211-25.aglt2.org
[2026-01-08 11:27:51] apptainer works
[2026-01-08 11:27:51] Set ATHENA_PROC_NUMBER=9
[2026-01-08 11:27:51] Set ATHENA_CORE_NUMBER=9
[2026-01-08 11:27:51] Starting ATLAS job with PandaID=6962913761
[2026-01-08 11:27:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:40:08 (1991239): BOINC client no longer exists - exiting
16:40:08 (1991239): timer handler: client dead, exiting
16:46:44 (1224008): wrapper (7.7.26015): starting
16:46:44 (1224008): wrapper: running run_atlas (--nthreads 11)
[2026-01-08 16:46:44] Arguments: --nthreads 11
[2026-01-08 16:46:44] Threads: 11
[2026-01-08 16:46:44] This job has been restarted, cleaning up previous attempt
[2026-01-08 16:46:44] Checking for CVMFS
[2026-01-08 16:46:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 16:46:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 16:46:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 16:46:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 16:46:45] 2.13.3.0 8593 18870 246756 154920 0 636 30535854 39288832 9664 16776704 0 17308116 99.749 31937638 30335 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 16:46:45] CVMFS is ok
[2026-01-08 16:46:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 16:46:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 16:46:45] Further information can be found at the LHC@home message board.
[2026-01-08 16:46:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 16:46:45] Checking for apptainer binary...
[2026-01-08 16:46:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 16:46:45] Running /usr/bin/apptainer --version
[2026-01-08 16:46:45] apptainer version 1.4.5-2.el9
[2026-01-08 16:46:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 16:46:45] c-211-25.aglt2.org
[2026-01-08 16:46:45] apptainer works
[2026-01-08 16:46:45] Set ATHENA_PROC_NUMBER=11
[2026-01-08 16:46:45] Set ATHENA_CORE_NUMBER=11
[2026-01-08 16:46:45] Starting ATLAS job with PandaID=6962913761
[2026-01-08 16:46:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:03:27]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:03:27] 2026-01-09 14:23:40,818 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6962913761/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 10:03:27] 2026-01-09 14:23:40,819 | INFO     | extracted standard info from prmon json
[2026-01-09 10:03:27] 2026-01-09 14:23:40,820 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 10:03:27] 2026-01-09 14:23:40,824 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 10:03:27] 2026-01-09 14:23:40,825 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 10:03:27] 2026-01-09 14:23:40,825 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 10:03:27] 2026-01-09 14:23:41,005 | INFO     | fitting pss+swap vs Time
[2026-01-09 10:03:27] 2026-01-09 14:23:41,049 | INFO     | sum of square deviations: 290074926391.4901
[2026-01-09 10:03:27] 2026-01-09 14:23:41,613 | INFO     | sum of deviations: -129091651175.31894
[2026-01-09 10:03:27] 2026-01-09 14:23:41,614 | INFO     | mean x: 1767938652.4284253
[2026-01-09 10:03:27] 2026-01-09 14:23:41,614 | INFO     | mean y: 2638434.7668711655
[2026-01-09 10:03:27] 2026-01-09 14:23:41,614 | INFO     | intersect: 789421776.0841273
[2026-01-09 10:03:27] 2026-01-09 14:23:41,616 | INFO     | chi2: 5.116651442169123
[2026-01-09 10:03:27] 2026-01-09 14:23:41,618 | INFO     | sum of square deviations: 285649064524.65796
[2026-01-09 10:03:27] 2026-01-09 14:23:42,135 | INFO     | sum of deviations: 201903347671.9966
[2026-01-09 10:03:27] 2026-01-09 14:23:42,136 | INFO     | mean x: 1767938499.9331963
[2026-01-09 10:03:27] 2026-01-09 14:23:42,163 | INFO     | mean y: 2649839.4768756423
[2026-01-09 10:03:27] 2026-01-09 14:23:42,163 | INFO     | intersect: -1246969872.069238
[2026-01-09 10:03:27] 2026-01-09 14:23:42,165 | INFO     | chi2: 1.539110184004546
[2026-01-09 10:03:27] 2026-01-09 14:23:42,165 | INFO     | current chi2=1.539110184004546 (change=69.91958116748198 %)
[2026-01-09 10:03:27] 2026-01-09 14:23:42,166 | INFO     | sum of square deviations: 281268340616.0286
[2026-01-09 10:03:27] 2026-01-09 14:23:44,010 | INFO     | monitor loop #2869: job 0:6962913761 is in state 'finished'
[2026-01-09 10:03:27] 2026-01-09 14:23:44,010 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 10:03:27] 2026-01-09 14:23:44,474 | INFO     | sum of deviations: 198876445791.31592
[2026-01-09 10:03:27] 2026-01-09 14:23:44,474 | INFO     | mean x: 1767938347.4359505
[2026-01-09 10:03:27] 2026-01-09 14:23:44,474 | INFO     | mean y: 2649734.3357438017
[2026-01-09 10:03:27] 2026-01-09 14:23:44,475 | INFO     | intersect: -1247406685.6159787
[2026-01-09 10:03:27] 2026-01-09 14:23:44,476 | INFO     | chi2: 1.5387878567776825
[2026-01-09 10:03:27] 2026-01-09 14:23:44,476 | INFO     | current chi2=1.5387878567776825 (change=0.020942440002891114 %)
[2026-01-09 10:03:27] 2026-01-09 14:23:44,477 | INFO     | right removable region: 967
[2026-01-09 10:03:27] 2026-01-09 14:23:44,549 | INFO     | sum of square deviations: 285648510644.6581
[2026-01-09 10:03:27] 2026-01-09 14:23:44,888 | INFO     | sum of deviations: -296338082749.45514
[2026-01-09 10:03:27] 2026-01-09 14:23:44,888 | INFO     | mean x: 1767938804.9331963
[2026-01-09 10:03:27] 2026-01-09 14:23:44,888 | INFO     | mean y: 2644185.085303186
[2026-01-09 10:03:27] 2026-01-09 14:23:44,888 | INFO     | intersect: 1836743003.5594473
[2026-01-09 10:03:27] 2026-01-09 14:23:44,890 | INFO     | chi2: 3.693344124024308
[2026-01-09 10:03:27] 2026-01-09 14:23:44,890 | INFO     | current chi2=3.693344124024308 (change=27.81716390556841 %)
[2026-01-09 10:03:27] 2026-01-09 14:23:44,896 | INFO     | sum of square deviations: 281267351560.28156
[2026-01-09 10:03:27] 2026-01-09 14:23:44,994 | INFO     | sum of deviations: -330205155235.3554
[2026-01-09 10:03:27] 2026-01-09 14:23:44,995 | INFO     | mean x: 1767938957.4380164
[2026-01-09 10:03:27] 2026-01-09 14:23:44,995 | INFO     | mean y: 2645362.8357438017
[2026-01-09 10:03:27] 2026-01-09 14:23:44,995 | INFO     | intersect: 2078188630.296474
[2026-01-09 10:03:27] 2026-01-09 14:23:44,996 | INFO     | chi2: 3.64446819122313
[2026-01-09 10:03:27] 2026-01-09 14:23:44,997 | INFO     | current chi2=3.64446819122313 (change=1.3233517148659872 %)
[2026-01-09 10:03:27] 2026-01-09 14:23:45,001 | INFO     | left removable region: 20
[2026-01-09 10:03:27] 2026-01-09 14:23:45,003 | INFO     | sum of square deviations: 263356366351.95566
[2026-01-09 10:03:27] 2026-01-09 14:23:45,120 | INFO     | sum of deviations: 26255513231.65468
[2026-01-09 10:03:27] 2026-01-09 14:23:45,121 | INFO     | mean x: 1767938926.9535375
[2026-01-09 10:03:27] 2026-01-09 14:23:45,121 | INFO     | mean y: 2655768.923970433
[2026-01-09 10:03:27] 2026-01-09 14:23:45,121 | INFO     | intersect: -173600246.95434585
[2026-01-09 10:03:27] 2026-01-09 14:23:45,122 | INFO     | chi2: 0.032297723756163035
[2026-01-09 10:03:27] 2026-01-09 14:23:45,123 | INFO     | current memory leak: 0.10 B/s (using 947 data points, chi2=0.03)
[2026-01-09 10:03:27] 2026-01-09 14:23:45,128 | INFO     | could have reported an average CPU frequency of 2900 MHz (36 samples)
[2026-01-09 10:03:27] 2026-01-09 14:23:45,129 | INFO     | ..............................
[2026-01-09 10:03:27] 2026-01-09 14:23:45,129 | INFO     | . Timing measurements:
[2026-01-09 10:03:27] 2026-01-09 14:23:45,129 | INFO     | . get job = 0 s
[2026-01-09 10:03:27] 2026-01-09 14:23:45,129 | INFO     | . initial setup = 2 s
[2026-01-09 10:03:27] 2026-01-09 14:23:45,129 | INFO     | . payload setup = 7 s
[2026-01-09 10:03:27] 2026-01-09 14:23:45,129 | INFO     | . stage-in = 0 s
[2026-01-09 10:03:27] 2026-01-09 14:23:45,129 | INFO     | . payload execution = 59664 s
[2026-01-09 10:03:27] 2026-01-09 14:23:45,130 | INFO     | . stage-out = 17 s
[2026-01-09 10:03:27] 2026-01-09 14:23:45,130 | INFO     | . log creation = 3 s
[2026-01-09 10:03:27] 2026-01-09 14:23:45,130 | INFO     | ..............................
[2026-01-09 10:03:27] 2026-01-09 14:23:45,971 | INFO     | 
[2026-01-09 10:03:27] 2026-01-09 14:23:45,971 | INFO     | job summary report
[2026-01-09 10:03:27] 2026-01-09 14:23:45,971 | INFO     | --------------------------------------------------
[2026-01-09 10:03:27] 2026-01-09 14:23:45,972 | INFO     | PanDA job id: 6962913761
[2026-01-09 10:03:27] 2026-01-09 14:23:45,972 | INFO     | task id: 47898826
[2026-01-09 10:03:27] 2026-01-09 14:23:45,972 | INFO     | errors: (none)
[2026-01-09 10:03:27] 2026-01-09 14:23:45,972 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 10:03:27] 2026-01-09 14:23:45,972 | INFO     | pilot state: finished 
[2026-01-09 10:03:27] 2026-01-09 14:23:45,972 | INFO     | transexitcode: 0
[2026-01-09 10:03:27] 2026-01-09 14:23:45,973 | INFO     | exeerrorcode: 0
[2026-01-09 10:03:27] 2026-01-09 14:23:45,973 | INFO     | exeerrordiag: 
[2026-01-09 10:03:27] 2026-01-09 14:23:45,973 | INFO     | exitcode: 0
[2026-01-09 10:03:27] 2026-01-09 14:23:45,973 | INFO     | exitmsg: OK
[2026-01-09 10:03:27] 2026-01-09 14:23:45,973 | INFO     | cpuconsumptiontime: 109987 s
[2026-01-09 10:03:27] 2026-01-09 14:23:45,973 | INFO     | nevents: 400
[2026-01-09 10:03:27] 2026-01-09 14:23:45,974 | INFO     | neventsw: 0
[2026-01-09 10:03:27] 2026-01-09 14:23:45,974 | INFO     | pid: 1271958
[2026-01-09 10:03:27] 2026-01-09 14:23:45,974 | INFO     | pgrp: 1271958
[2026-01-09 10:03:27] 2026-01-09 14:23:45,974 | INFO     | corecount: 11
[2026-01-09 10:03:27] 2026-01-09 14:23:45,974 | INFO     | event service: False
[2026-01-09 10:03:27] 2026-01-09 14:23:45,974 | INFO     | sizes: {0: 2283739, 1: 2283994, 2: 2283994, 6: 2284284, 12: 2284312, 59681: 2334480, 59684: 2334607, 59704: 2343661, 59706: 2343717, 59789: 2343911}
[2026-01-09 10:03:27] 2026-01-09 14:23:45,997 | INFO     | --------------------------------------------------
[2026-01-09 10:03:27] 2026-01-09 14:23:45,997 | INFO     | 
[2026-01-09 10:03:27] 2026-01-09 14:23:45,998 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 10:03:27] 2026-01-09 14:23:46,687 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 10:03:27] 2026-01-09 14:23:46,736 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 10:03:27] 2026-01-09 14:23:46,736 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 10:03:27] 2026-01-09 14:23:46,736 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 10:03:27] 2026-01-09 14:23:46,737 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 10:03:27] 2026-01-09 14:23:46,737 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 10:03:27] 2026-01-09 14:23:46,737 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 10:03:27] 2026-01-09 14:23:46,737 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 10:03:27] 2026-01-09 14:23:46,737 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 10:03:27] 2026-01-09 14:23:46,737 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 10:03:27] 2026-01-09 14:23:46,738 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 10:03:27] 2026-01-09 14:23:46,738 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 10:03:27] 2026-01-09 14:23:46,738 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 10:03:27] 2026-01-09 14:23:46,738 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 10:03:27] 2026-01-09 14:23:46,738 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 10:03:27] 2026-01-09 14:23:46,738 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 10:03:27] 2026-01-09 14:23:46,738 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 10:03:27] 2026-01-09 14:23:46,739 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 10:03:27] 2026-01-09 14:23:46,900 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 10:03:27] 2026-01-09 14:23:46,900 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 10:03:27] 2026-01-09 14:23:46,901 | INFO     | job 6962913761 has completed (purged errors)
[2026-01-09 10:03:27] 2026-01-09 14:23:46,901 | INFO     | overall cleanup function is called
[2026-01-09 10:03:27] 2026-01-09 14:23:48,002 | INFO     | --- collectZombieJob: --- 10, [1271958]
[2026-01-09 10:03:27] 2026-01-09 14:23:48,002 | INFO     | zombie collector waiting for pid 1271958
[2026-01-09 10:03:27] 2026-01-09 14:23:48,002 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 10:03:27] 2026-01-09 14:23:48,003 | INFO     | collected zombie processes
[2026-01-09 10:03:27] 2026-01-09 14:23:48,003 | INFO     | will attempt to kill all subprocesses of pid=1271958
[2026-01-09 10:03:27] 2026-01-09 14:23:49,392 | INFO     | PID=1240056 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 10:03:27] 2026-01-09 14:23:49,392 | INFO     | .. there are 28 such processes running
[2026-01-09 10:03:27] 2026-01-09 14:23:50,932 | INFO     | process IDs to be killed: [1271958] (in reverse order)
[2026-01-09 10:03:27] 2026-01-09 14:23:51,742 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 10:03:27] 2026-01-09 14:23:51,742 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 10:03:27] 2026-01-09 14:23:51,874 | INFO     | did not find any defunct processes belonging to 1271958
[2026-01-09 10:03:27] 2026-01-09 14:23:52,209 | INFO     | did not find any defunct processes belonging to 1271958
[2026-01-09 10:03:27] 2026-01-09 14:23:52,210 | INFO     | ready for new job
[2026-01-09 10:03:27] 2026-01-09 14:23:52,210 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 10:03:27] 2026-01-09 14:23:52,266 | INFO     | ***************************************
[2026-01-09 10:03:27] 2026-01-09 14:23:52,266 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 10:03:27] 2026-01-09 14:23:52,266 | INFO     | ***************************************
[2026-01-09 10:03:27] 2026-01-09 14:23:52,267 | INFO     | 
[2026-01-09 10:03:27] 2026-01-09 14:23:52,331 | INFO     | architecture information:
[2026-01-09 10:03:27] 2026-01-09 14:23:52,348 | INFO     | executing command: cat /etc/os-release
[2026-01-09 10:03:27] 2026-01-09 14:23:52,584 | INFO     | cat /etc/os-release:
[2026-01-09 10:03:27] NAME="CentOS Linux"
[2026-01-09 10:03:27] VERSION="7 (Core)"
[2026-01-09 10:03:27] ID="centos"
[2026-01-09 10:03:27] ID_LIKE="rhel fedora"
[2026-01-09 10:03:27] VERSION_ID="7"
[2026-01-09 10:03:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 10:03:27] ANSI_COLOR="0;31"
[2026-01-09 10:03:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 10:03:27] HOME_URL="https://www.centos.org/"
[2026-01-09 10:03:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 10:03:27] 
[2026-01-09 10:03:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 10:03:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 10:03:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 10:03:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 10:03:27] 
[2026-01-09 10:03:27] 2026-01-09 14:23:52,585 | INFO     | ***************************************
[2026-01-09 10:03:27] 2026-01-09 14:23:53,088 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 10:03:27] 2026-01-09 14:23:53,313 | INFO     | sufficient remaining disk space (51168411648 B)
[2026-01-09 10:03:27] 2026-01-09 14:23:53,313 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 10:03:27] 2026-01-09 14:23:53,313 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 10:03:27] 2026-01-09 14:23:53,314 | INFO     | update_server=False
[2026-01-09 10:03:27] 2026-01-09 14:23:53,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 10:03:27] 2026-01-09 14:23:53,345 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:03:27] 2026-01-09 14:23:53,345 | INFO     | aborting loop
[2026-01-09 10:03:27] 2026-01-09 14:23:53,356 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 10:03:27] 2026-01-09 14:23:53,892 | INFO     | all data control threads have been joined
[2026-01-09 10:03:27] 2026-01-09 14:23:53,981 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 10:03:27] 2026-01-09 14:23:54,320 | INFO     | [job] retrieve thread has finished
[2026-01-09 10:03:27] 2026-01-09 14:23:54,330 | INFO     | all job control threads have been joined
[2026-01-09 10:03:27] 2026-01-09 14:23:54,367 | INFO     | [job] job monitor thread has finished
[2026-01-09 10:03:27] 2026-01-09 14:23:54,755 | INFO     | all payload control threads have been joined
[2026-01-09 10:03:27] 2026-01-09 14:23:54,898 | INFO     | [data] control thread has finished
[2026-01-09 10:03:27] 2026-01-09 14:23:54,973 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:03:27] 2026-01-09 14:23:54,979 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:03:27] 2026-01-09 14:23:55,083 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:03:27] 2026-01-09 14:23:55,275 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:03:27] 2026-01-09 14:23:55,343 | INFO     | [job] control thread has finished
[2026-01-09 10:03:27] 2026-01-09 14:23:55,345 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:03:27] 2026-01-09 14:23:55,346 | INFO     | [job] validate thread has finished
[2026-01-09 10:03:27] 2026-01-09 14:23:55,355 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:03:27] 2026-01-09 14:23:55,458 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:03:27] 2026-01-09 14:23:55,760 | INFO     | [payload] control thread has finished
[2026-01-09 10:03:27] 2026-01-09 14:23:55,923 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:03:27] 2026-01-09 14:23:55,988 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:03:27] 2026-01-09 14:23:56,361 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:03:27] 2026-01-09 14:23:57,391 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:03:27] 2026-01-09 14:24:02,042 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:03:27] 2026-01-09 14:24:03,871 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140026545895232)>', '<ExcThread(monitor, started 140026167932672)>']
[2026-01-09 10:03:27] 2026-01-09 14:24:08,936 | INFO     | all workflow threads have been joined
[2026-01-09 10:03:27] 2026-01-09 14:24:08,936 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:03:27] 2026-01-09 14:24:08,937 | INFO     | traces error code: 0
[2026-01-09 10:03:27] 2026-01-09 14:24:08,937 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:03:27] 2026-01-09 14:24:25,715 | INFO     | PID=1240056 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 10:03:27] 2026-01-09 14:24:25,716 | INFO     | .. there are 28 such processes running
[2026-01-09 10:03:27] 2026-01-09 14:24:25,740 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:03:27] 2026-01-09 14:24:25,740 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:03:27] 2026-01-09 14:24:25,740 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:03:27] 2026-01-09 14:24:25,741 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:03:27] 2026-01-09 14:24:25,741 | INFO     | [monitor] control thread has ended
[2026-01-09 10:03:27] 2026-01-09 14:24:30,671 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:03:27] 2026-01-09 14:24:30,799 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:03:27] 2026-01-09 14:24:30,856 [wrapper] pilotpid: 1240056
[2026-01-09 10:03:27] 2026-01-09 14:24:30,895 [wrapper] Pilot exit status: 0
[2026-01-09 10:03:27] 2026-01-09 14:24:31,639 [wrapper] pandaids: 6962913761 6962913761 6962913761
[2026-01-09 10:03:27] 2026-01-09 14:24:31,913 [wrapper] cleanup supervisor_pilot 3749677 1240057
[2026-01-09 10:03:27] 2026-01-09 14:24:31,921 [wrapper] Test setup, not cleaning
[2026-01-09 10:03:27] 2026-01-09 14:24:31,926 [wrapper] apfmon messages muted
[2026-01-09 10:03:27] 2026-01-09 14:24:31,932 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:03:27] 2026-01-09 14:24:31,963 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:03:27]  *** Error codes and diagnostics ***
[2026-01-09 10:03:27]     "exeErrorCode": 0,
[2026-01-09 10:03:27]     "exeErrorDiag": "",
[2026-01-09 10:03:27]     "pilotErrorCode": 0,
[2026-01-09 10:03:27]     "pilotErrorDiag": "",
[2026-01-09 10:03:27]  *** Listing of results directory ***
[2026-01-09 10:03:27] total 665960
[2026-01-09 10:03:27] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-09 10:03:27] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-09 10:03:27] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 02:59 queuedata.json
[2026-01-09 10:03:27] -rwx------. 1 boincer umatlas     36322 Jan  8 03:00 runpilot2-wrapper.sh
[2026-01-09 10:03:27] -rw-r--r--. 1 boincer umatlas       100 Jan  8 05:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:03:27] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 05:51 run_atlas
[2026-01-09 10:03:27] -rw-r--r--. 1 boincer umatlas       105 Jan  8 05:51 job.xml
[2026-01-09 10:03:27] -rw-r--r--. 3 boincer umatlas 223379004 Jan  8 05:51 EVNT.47898824._000302.pool.root.1
[2026-01-09 10:03:27] -rw-r--r--. 3 boincer umatlas 223379004 Jan  8 05:51 ATLAS.root_0
[2026-01-09 10:03:27] -rw-r--r--. 2 boincer umatlas    592400 Jan  8 05:51 input.tar.gz
[2026-01-09 10:03:27] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 05:51 start_atlas.sh
[2026-01-09 10:03:27] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 05:51 shared
[2026-01-09 10:03:27] -rw-r--r--. 1 boincer umatlas         0 Jan  8 05:51 boinc_lockfile
[2026-01-09 10:03:27] -rw-r--r--. 1 boincer umatlas      2517 Jan  8 16:46 pandaJob.out
[2026-01-09 10:03:27] -rw-------. 1 boincer umatlas        57 Jan  8 16:46 setup.sh.local
[2026-01-09 10:03:27] -rw-------. 1 boincer umatlas    989845 Jan  8 16:46 agis_schedconf.cvmfs.json
[2026-01-09 10:03:27] -rw-------. 1 boincer umatlas 216487865 Jan  9 09:15 HITS.47898826._017101.pool.root.1
[2026-01-09 10:03:27] -rw-r--r--. 1 boincer umatlas       532 Jan  9 09:16 boinc_task_state.xml
[2026-01-09 10:03:27] -rw-------. 1 boincer umatlas      1047 Jan  9 09:21 memory_monitor_summary.json
[2026-01-09 10:03:27] -rw-------. 1 boincer umatlas   1516240 Jan  9 09:22 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:03:27] -rw-------. 1 boincer umatlas    989525 Jan  9 09:22 log.47898826._017101.job.log.tgz.1
[2026-01-09 10:03:27] -rw-------. 1 boincer umatlas      7828 Jan  9 09:23 heartbeat.json
[2026-01-09 10:03:27] -rw-------. 1 boincer umatlas        96 Jan  9 09:24 pilot_heartbeat.json
[2026-01-09 10:03:27] -rw-------. 1 boincer umatlas       823 Jan  9 09:24 pilotlog.txt
[2026-01-09 10:03:27] -rw-------. 1 boincer umatlas   6400327 Jan  9 09:24 log.47898826._017101.job.log.1
[2026-01-09 10:03:27] -rw-------. 1 boincer umatlas       357 Jan  9 09:24 output.list
[2026-01-09 10:03:27] -rw-r--r--. 1 boincer umatlas       620 Jan  9 09:24 runtime_log
[2026-01-09 10:03:27] -rw-------. 1 boincer umatlas   7413760 Jan  9 09:24 result.tar.gz
[2026-01-09 10:03:27] -rw-r--r--. 1 boincer umatlas      9430 Jan  9 09:24 runtime_log.err
[2026-01-09 10:03:27] -rw-------. 1 boincer umatlas       909 Jan  9 09:24 Mf2NDmv7zx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfLjKDmBzWDZm.diag
[2026-01-09 10:03:27] -rw-r--r--. 1 boincer umatlas      6526 Jan  9 09:57 init_data.xml
[2026-01-09 10:03:27] -rw-r--r--. 1 boincer umatlas        29 Jan  9 10:03 wrapper_checkpoint.txt
[2026-01-09 10:03:27] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 10:03 boinc_mmap_file
[2026-01-09 10:03:27] -rw-r--r--. 1 boincer umatlas     25879 Jan  9 10:03 stderr.txt
[2026-01-09 10:03:27] HITS file was successfully produced:
[2026-01-09 10:03:27] -rw-------. 1 boincer umatlas 216487865 Jan  9 09:15 shared/HITS.pool.root.1
[2026-01-09 10:03:27]  *** Contents of shared directory: ***
[2026-01-09 10:03:27] total 437400
[2026-01-09 10:03:27] -rw-r--r--. 3 boincer umatlas 223379004 Jan  8 05:51 ATLAS.root_0
[2026-01-09 10:03:27] -rw-r--r--. 2 boincer umatlas    592400 Jan  8 05:51 input.tar.gz
[2026-01-09 10:03:27] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 05:51 start_atlas.sh
[2026-01-09 10:03:27] -rw-------. 1 boincer umatlas 216487865 Jan  9 09:15 HITS.pool.root.1
[2026-01-09 10:03:27] -rw-------. 1 boincer umatlas   7413760 Jan  9 09:24 result.tar.gz
10:03:49 (1224008): run_atlas exited; CPU time 112693.974159
10:03:49 (1224008): called boinc_finish(0)

</stderr_txt>
]]>

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