Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:02:54 (11651): wrapper (7.7.26015): starting
03:02:54 (11651): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 03:02:54] Arguments: --nthreads 8
[2026-01-08 03:02:54] Threads: 8
[2026-01-08 03:02:54] Checking for CVMFS
[2026-01-08 03:02:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 03:02:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 03:02:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 03:02:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 03:02:54] 2.11.2.0 2847 134954 81136 154896 3 1 17578140 20275200 1 130560 0 35763474 99.832 8718600 26209 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 03:02:54] CVMFS is ok
[2026-01-08 03:02:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 03:02:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 03:02:54] Further information can be found at the LHC@home message board.
[2026-01-08 03:02:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 03:02:54] Checking for apptainer binary...
[2026-01-08 03:02:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 03:02:54] Running /usr/bin/apptainer --version
[2026-01-08 03:02:54] apptainer version 1.3.2-1.el7
[2026-01-08 03:02:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 03:02:56] c-204-19.aglt2.org
[2026-01-08 03:02:56] apptainer works
[2026-01-08 03:02:56] Set ATHENA_PROC_NUMBER=8
[2026-01-08 03:02:56] Set ATHENA_CORE_NUMBER=8
[2026-01-08 03:02:56] Starting ATLAS job with PandaID=6962913719
[2026-01-08 03:02:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 06:09:40]  *** The last 200 lines of the pilot log: ***
[2026-01-08 06:09:40] 2026-01-08 11:08:44,601 | INFO     | mean y: 2482800.076923077
[2026-01-08 06:09:40] 2026-01-08 11:08:44,601 | INFO     | intersect: -28971787581.91733
[2026-01-08 06:09:40] 2026-01-08 11:08:44,601 | INFO     | chi2: 1.448227896386882
[2026-01-08 06:09:40] 2026-01-08 11:08:44,601 | INFO     | sum of square deviations: 1719429448.0
[2026-01-08 06:09:40] 2026-01-08 11:08:44,602 | INFO     | sum of deviations: 29743152199.0
[2026-01-08 06:09:40] 2026-01-08 11:08:44,603 | INFO     | mean x: 1767864796.0
[2026-01-08 06:09:40] 2026-01-08 11:08:44,603 | INFO     | mean y: 2481889.429378531
[2026-01-08 06:09:40] 2026-01-08 11:08:44,603 | INFO     | intersect: -30578517962.494804
[2026-01-08 06:09:40] 2026-01-08 11:08:44,603 | INFO     | chi2: 1.448953277757485
[2026-01-08 06:09:40] 2026-01-08 11:08:44,603 | INFO     | current chi2=1.448953277757485 (change=-0.05008751539814163 %)
[2026-01-08 06:09:40] 2026-01-08 11:08:44,603 | INFO     | right removable region: 176
[2026-01-08 06:09:40] 2026-01-08 11:08:44,604 | INFO     | sum of square deviations: 1719429448.0
[2026-01-08 06:09:40] 2026-01-08 11:08:44,605 | INFO     | sum of deviations: 3875874303.0000005
[2026-01-08 06:09:40] 2026-01-08 11:08:44,605 | INFO     | mean x: 1767865101.0
[2026-01-08 06:09:40] 2026-01-08 11:08:44,606 | INFO     | mean y: 2509667.2824858758
[2026-01-08 06:09:40] 2026-01-08 11:08:44,606 | INFO     | intersect: -3982546494.2869887
[2026-01-08 06:09:40] 2026-01-08 11:08:44,606 | INFO     | chi2: 0.028968190037429203
[2026-01-08 06:09:40] 2026-01-08 11:08:44,606 | INFO     | current chi2=0.028968190037429203 (change=97.9997492031675 %)
[2026-01-08 06:09:40] 2026-01-08 11:08:44,606 | INFO     | sum of square deviations: 1577789583.0
[2026-01-08 06:09:40] 2026-01-08 11:08:44,608 | INFO     | sum of deviations: 4503546948.5
[2026-01-08 06:09:40] 2026-01-08 11:08:44,608 | INFO     | mean x: 1767865253.5
[2026-01-08 06:09:40] 2026-01-08 11:08:44,608 | INFO     | mean y: 2508933.284883721
[2026-01-08 06:09:40] 2026-01-08 11:08:44,608 | INFO     | intersect: -5043578487.713829
[2026-01-08 06:09:40] 2026-01-08 11:08:44,609 | INFO     | chi2: 0.011673673324660247
[2026-01-08 06:09:40] 2026-01-08 11:08:44,609 | INFO     | current chi2=0.011673673324660247 (change=59.70175109464232 %)
[2026-01-08 06:09:40] 2026-01-08 11:08:44,609 | INFO     | sum of square deviations: 1444149868.0
[2026-01-08 06:09:40] 2026-01-08 11:08:44,611 | INFO     | sum of deviations: 4624400118.0
[2026-01-08 06:09:40] 2026-01-08 11:08:44,611 | INFO     | mean x: 1767865406.0
[2026-01-08 06:09:40] 2026-01-08 11:08:44,611 | INFO     | mean y: 2508833.2035928145
[2026-01-08 06:09:40] 2026-01-08 11:08:44,611 | INFO     | intersect: -5658480495.720071
[2026-01-08 06:09:40] 2026-01-08 11:08:44,611 | INFO     | chi2: 0.0010664096497444734
[2026-01-08 06:09:40] 2026-01-08 11:08:44,612 | INFO     | current chi2=0.0010664096497444734 (change=90.86483217333384 %)
[2026-01-08 06:09:40] 2026-01-08 11:08:44,612 | INFO     | sum of square deviations: 1318277740.5
[2026-01-08 06:09:40] 2026-01-08 11:08:44,613 | INFO     | sum of deviations: 3716810977.5
[2026-01-08 06:09:40] 2026-01-08 11:08:44,613 | INFO     | mean x: 1767865558.5
[2026-01-08 06:09:40] 2026-01-08 11:08:44,613 | INFO     | mean y: 2509930.9691358022
[2026-01-08 06:09:40] 2026-01-08 11:08:44,614 | INFO     | intersect: -4981888965.188186
[2026-01-08 06:09:40] 2026-01-08 11:08:44,614 | INFO     | chi2: 0.0006975417010949259
[2026-01-08 06:09:40] 2026-01-08 11:08:44,614 | INFO     | current chi2=0.0006975417010949259 (change=34.58970469161953 %)
[2026-01-08 06:09:40] 2026-01-08 11:08:44,614 | INFO     | sum of square deviations: 1199940638.0
[2026-01-08 06:09:40] 2026-01-08 11:08:44,616 | INFO     | sum of deviations: 3057300296.9999995
[2026-01-08 06:09:40] 2026-01-08 11:08:44,616 | INFO     | mean x: 1767865711.0
[2026-01-08 06:09:40] 2026-01-08 11:08:44,616 | INFO     | mean y: 2510779.9554140125
[2026-01-08 06:09:40] 2026-01-08 11:08:44,616 | INFO     | intersect: -4501792343.159927
[2026-01-08 06:09:40] 2026-01-08 11:08:44,616 | INFO     | chi2: 0.0005342177813420236
[2026-01-08 06:09:40] 2026-01-08 11:08:44,616 | INFO     | current chi2=0.0005342177813420236 (change=23.414215880790216 %)
[2026-01-08 06:09:40] 2026-01-08 11:08:44,616 | INFO     | left removable region: 50
[2026-01-08 06:09:40] 2026-01-08 11:08:44,617 | INFO     | sum of square deviations: 620244187.5
[2026-01-08 06:09:40] 2026-01-08 11:08:44,617 | INFO     | sum of deviations: 1175204497.5
[2026-01-08 06:09:40] 2026-01-08 11:08:44,617 | INFO     | mean x: 1767866290.5
[2026-01-08 06:09:40] 2026-01-08 11:08:44,618 | INFO     | mean y: 2513454.1825396824
[2026-01-08 06:09:40] 2026-01-08 11:08:44,618 | INFO     | intersect: -3347142145.0877748
[2026-01-08 06:09:40] 2026-01-08 11:08:44,618 | INFO     | chi2: 0.00010576211308005122
[2026-01-08 06:09:40] 2026-01-08 11:08:44,618 | INFO     | current memory leak: 1.89 B/s (using 126 data points, chi2=0.00)
[2026-01-08 06:09:40] 2026-01-08 11:08:44,619 | INFO     | could have reported an average CPU frequency of 2003 MHz (10 samples)
[2026-01-08 06:09:40] 2026-01-08 11:08:44,619 | INFO     | ..............................
[2026-01-08 06:09:40] 2026-01-08 11:08:44,619 | INFO     | . Timing measurements:
[2026-01-08 06:09:40] 2026-01-08 11:08:44,619 | INFO     | . get job = 0 s
[2026-01-08 06:09:40] 2026-01-08 11:08:44,619 | INFO     | . initial setup = 2 s
[2026-01-08 06:09:40] 2026-01-08 11:08:44,619 | INFO     | . payload setup = 8 s
[2026-01-08 06:09:40] 2026-01-08 11:08:44,619 | INFO     | . stage-in = 0 s
[2026-01-08 06:09:40] 2026-01-08 11:08:44,619 | INFO     | . payload execution = 11087 s
[2026-01-08 06:09:40] 2026-01-08 11:08:44,620 | INFO     | . stage-out = 2 s
[2026-01-08 06:09:40] 2026-01-08 11:08:44,620 | INFO     | . log creation = 0 s
[2026-01-08 06:09:40] 2026-01-08 11:08:44,620 | INFO     | ..............................
[2026-01-08 06:09:40] 2026-01-08 11:08:44,707 | INFO     | 
[2026-01-08 06:09:40] 2026-01-08 11:08:44,708 | INFO     | job summary report
[2026-01-08 06:09:40] 2026-01-08 11:08:44,708 | INFO     | --------------------------------------------------
[2026-01-08 06:09:40] 2026-01-08 11:08:44,708 | INFO     | PanDA job id: 6962913719
[2026-01-08 06:09:40] 2026-01-08 11:08:44,708 | INFO     | task id: 47898826
[2026-01-08 06:09:40] 2026-01-08 11:08:44,708 | INFO     | errors: (none)
[2026-01-08 06:09:40] 2026-01-08 11:08:44,709 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 06:09:40] 2026-01-08 11:08:44,709 | INFO     | pilot state: finished 
[2026-01-08 06:09:40] 2026-01-08 11:08:44,709 | INFO     | transexitcode: 0
[2026-01-08 06:09:40] 2026-01-08 11:08:44,709 | INFO     | exeerrorcode: 0
[2026-01-08 06:09:40] 2026-01-08 11:08:44,709 | INFO     | exeerrordiag: 
[2026-01-08 06:09:40] 2026-01-08 11:08:44,709 | INFO     | exitcode: 0
[2026-01-08 06:09:40] 2026-01-08 11:08:44,710 | INFO     | exitmsg: OK
[2026-01-08 06:09:40] 2026-01-08 11:08:44,710 | INFO     | cpuconsumptiontime: 83076 s
[2026-01-08 06:09:40] 2026-01-08 11:08:44,710 | INFO     | nevents: 400
[2026-01-08 06:09:40] 2026-01-08 11:08:44,710 | INFO     | neventsw: 0
[2026-01-08 06:09:40] 2026-01-08 11:08:44,710 | INFO     | pid: 22117
[2026-01-08 06:09:40] 2026-01-08 11:08:44,710 | INFO     | pgrp: 22117
[2026-01-08 06:09:40] 2026-01-08 11:08:44,711 | INFO     | corecount: 8
[2026-01-08 06:09:40] 2026-01-08 11:08:44,711 | INFO     | event service: False
[2026-01-08 06:09:40] 2026-01-08 11:08:44,711 | INFO     | sizes: {0: 2283968, 6: 2284230, 11: 2284258, 11099: 2313434, 11102: 2322460, 11103: 2322516, 11111: 2322838}
[2026-01-08 06:09:40] 2026-01-08 11:08:44,711 | INFO     | --------------------------------------------------
[2026-01-08 06:09:40] 2026-01-08 11:08:44,711 | INFO     | 
[2026-01-08 06:09:40] 2026-01-08 11:08:44,712 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 06:09:40] 2026-01-08 11:08:44,740 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 06:09:40] 2026-01-08 11:08:44,741 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 06:09:40] 2026-01-08 11:08:44,741 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 06:09:40] 2026-01-08 11:08:44,741 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 06:09:40] 2026-01-08 11:08:44,741 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 06:09:40] 2026-01-08 11:08:44,741 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 06:09:40] 2026-01-08 11:08:44,742 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 06:09:40] 2026-01-08 11:08:44,742 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 06:09:40] 2026-01-08 11:08:44,742 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 06:09:40] 2026-01-08 11:08:44,742 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 06:09:40] 2026-01-08 11:08:44,742 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 06:09:40] 2026-01-08 11:08:44,742 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 06:09:40] 2026-01-08 11:08:44,743 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 06:09:40] 2026-01-08 11:08:44,743 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 06:09:40] 2026-01-08 11:08:44,743 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 06:09:40] 2026-01-08 11:08:44,743 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 06:09:40] 2026-01-08 11:08:44,743 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 06:09:40] 2026-01-08 11:08:44,744 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 06:09:40] 2026-01-08 11:08:44,744 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 06:09:40] 2026-01-08 11:08:44,744 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 06:09:40] 2026-01-08 11:08:44,744 | INFO     | job 6962913719 has completed (purged errors)
[2026-01-08 06:09:40] 2026-01-08 11:08:44,744 | INFO     | overall cleanup function is called
[2026-01-08 06:09:40] 2026-01-08 11:08:45,752 | INFO     | --- collectZombieJob: --- 10, [22117]
[2026-01-08 06:09:40] 2026-01-08 11:08:45,752 | INFO     | zombie collector waiting for pid 22117
[2026-01-08 06:09:40] 2026-01-08 11:08:45,752 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 06:09:40] 2026-01-08 11:08:45,753 | INFO     | collected zombie processes
[2026-01-08 06:09:40] 2026-01-08 11:08:45,753 | INFO     | will attempt to kill all subprocesses of pid=22117
[2026-01-08 06:09:40] 2026-01-08 11:08:45,841 | INFO     | process IDs to be killed: [22117] (in reverse order)
[2026-01-08 06:09:40] 2026-01-08 11:08:45,898 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 06:09:40] 2026-01-08 11:08:45,898 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 06:09:40] 2026-01-08 11:08:45,903 | INFO     | did not find any defunct processes belonging to 22117
[2026-01-08 06:09:40] 2026-01-08 11:08:45,907 | INFO     | did not find any defunct processes belonging to 22117
[2026-01-08 06:09:40] 2026-01-08 11:08:45,907 | INFO     | ready for new job
[2026-01-08 06:09:40] 2026-01-08 11:08:45,907 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 06:09:40] 2026-01-08 11:08:45,909 | INFO     | ***************************************
[2026-01-08 06:09:40] 2026-01-08 11:08:45,909 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 06:09:40] 2026-01-08 11:08:45,909 | INFO     | ***************************************
[2026-01-08 06:09:40] 2026-01-08 11:08:45,909 | INFO     | 
[2026-01-08 06:09:40] 2026-01-08 11:08:45,909 | INFO     | architecture information:
[2026-01-08 06:09:40] 2026-01-08 11:08:45,910 | INFO     | executing command: cat /etc/os-release
[2026-01-08 06:09:40] 2026-01-08 11:08:45,928 | INFO     | cat /etc/os-release:
[2026-01-08 06:09:40] NAME="CentOS Linux"
[2026-01-08 06:09:40] VERSION="7 (Core)"
[2026-01-08 06:09:40] ID="centos"
[2026-01-08 06:09:40] ID_LIKE="rhel fedora"
[2026-01-08 06:09:40] VERSION_ID="7"
[2026-01-08 06:09:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 06:09:40] ANSI_COLOR="0;31"
[2026-01-08 06:09:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 06:09:40] HOME_URL="https://www.centos.org/"
[2026-01-08 06:09:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 06:09:40] 
[2026-01-08 06:09:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 06:09:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 06:09:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 06:09:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 06:09:40] 
[2026-01-08 06:09:40] 2026-01-08 11:08:45,929 | INFO     | ***************************************
[2026-01-08 06:09:40] 2026-01-08 11:08:46,432 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 06:09:40] 2026-01-08 11:08:46,451 | INFO     | sufficient remaining disk space (18494783488 B)
[2026-01-08 06:09:40] 2026-01-08 11:08:46,452 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 06:09:40] 2026-01-08 11:08:46,452 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 06:09:40] 2026-01-08 11:08:46,452 | INFO     | update_server=False
[2026-01-08 06:09:40] 2026-01-08 11:08:46,453 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 06:09:40] 2026-01-08 11:08:46,453 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 06:09:40] 2026-01-08 11:08:46,519 | INFO     | all data control threads have been joined
[2026-01-08 06:09:40] 2026-01-08 11:08:46,609 | INFO     | all payload control threads have been joined
[2026-01-08 06:09:40] 2026-01-08 11:08:46,707 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 06:09:40] 2026-01-08 11:08:47,283 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 06:09:40] 2026-01-08 11:08:47,393 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 06:09:40] 2026-01-08 11:08:47,394 | INFO     | aborting loop
[2026-01-08 06:09:40] 2026-01-08 11:08:47,458 | INFO     | [job] retrieve thread has finished
[2026-01-08 06:09:40] 2026-01-08 11:08:47,459 | INFO     | [job] queue monitor thread has finished
[2026-01-08 06:09:40] 2026-01-08 11:08:47,479 | INFO     | all job control threads have been joined
[2026-01-08 06:09:40] 2026-01-08 11:08:47,524 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 06:09:40] 2026-01-08 11:08:47,525 | INFO     | [data] control thread has finished
[2026-01-08 06:09:40] 2026-01-08 11:08:47,615 | INFO     | [payload] control thread has finished
[2026-01-08 06:09:40] 2026-01-08 11:08:47,721 | INFO     | [payload] failed_post thread has finished
[2026-01-08 06:09:40] 2026-01-08 11:08:48,399 | INFO     | [job] job monitor thread has finished
[2026-01-08 06:09:40] 2026-01-08 11:08:48,484 | INFO     | [job] control thread has finished
[2026-01-08 06:09:40] 2026-01-08 11:08:48,496 | INFO     | [job] validate thread has finished
[2026-01-08 06:09:40] 2026-01-08 11:08:48,518 | INFO     | [payload] validate_post thread has finished
[2026-01-08 06:09:40] 2026-01-08 11:08:48,528 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 06:09:40] 2026-01-08 11:08:48,610 | INFO     | [data] copytool_in thread has finished
[2026-01-08 06:09:40] 2026-01-08 11:08:48,617 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 06:09:40] 2026-01-08 11:08:48,713 | INFO     | [data] copytool_out thread has finished
[2026-01-08 06:09:40] 2026-01-08 11:08:51,289 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 06:09:40] 2026-01-08 11:08:57,013 | INFO     | job.realtimelogging is not enabled
[2026-01-08 06:09:40] 2026-01-08 11:08:58,019 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 06:09:40] 2026-01-08 11:09:16,630 | INFO     | PID=15740 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 06:09:40] 2026-01-08 11:09:16,630 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 06:09:40] 2026-01-08 11:09:16,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 06:09:40] 2026-01-08 11:09:16,631 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 06:09:40] 2026-01-08 11:09:34,153 | INFO     | [monitor] cgroup control has ended
[2026-01-08 06:09:40] 2026-01-08 11:09:35,417 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140242348836672)>', '<ExcThread(monitor, started 140240949868288)>']
[2026-01-08 06:09:40] 2026-01-08 11:09:35,722 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 06:09:40] 2026-01-08 11:09:35,722 | INFO     | [monitor] control thread has ended
[2026-01-08 06:09:40] 2026-01-08 11:09:40,431 | INFO     | all workflow threads have been joined
[2026-01-08 06:09:40] 2026-01-08 11:09:40,431 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 06:09:40] 2026-01-08 11:09:40,432 | INFO     | traces error code: 0
[2026-01-08 06:09:40] 2026-01-08 11:09:40,432 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 06:09:40] 2026-01-08 11:09:40,560 [wrapper] ==== pilot stdout END ====
[2026-01-08 06:09:40] 2026-01-08 11:09:40,565 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 06:09:40] 2026-01-08 11:09:40,570 [wrapper] pilotpid: 15740
[2026-01-08 06:09:40] 2026-01-08 11:09:40,574 [wrapper] Pilot exit status: 0
[2026-01-08 06:09:40] 2026-01-08 11:09:40,594 [wrapper] pandaids: 6962913719
[2026-01-08 06:09:40] 2026-01-08 11:09:40,646 [wrapper] cleanup supervisor_pilot  1984 15741
[2026-01-08 06:09:40] 2026-01-08 11:09:40,651 [wrapper] Test setup, not cleaning
[2026-01-08 06:09:40] 2026-01-08 11:09:40,656 [wrapper] apfmon messages muted
[2026-01-08 06:09:40] 2026-01-08 11:09:40,661 [wrapper] ==== wrapper stdout END ====
[2026-01-08 06:09:40] 2026-01-08 11:09:40,666 [wrapper] ==== wrapper stderr END ====
[2026-01-08 06:09:40]  *** Error codes and diagnostics ***
[2026-01-08 06:09:40]     "exeErrorCode": 0,
[2026-01-08 06:09:40]     "exeErrorDiag": "",
[2026-01-08 06:09:40]     "pilotErrorCode": 0,
[2026-01-08 06:09:40]     "pilotErrorDiag": "",
[2026-01-08 06:09:40]  *** Listing of results directory ***
[2026-01-08 06:09:40] total 448160
[2026-01-08 06:09:40] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-08 06:09:40] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 02:59 queuedata.json
[2026-01-08 06:09:40] -rwx------ 1 boincer umatlas     36322 Jan  8 02:59 runpilot2-wrapper.sh
[2026-01-08 06:09:40] -rw-r--r-- 1 boincer umatlas       100 Jan  8 03:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 06:09:40] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 03:02 run_atlas
[2026-01-08 06:09:40] -rw-r--r-- 1 boincer umatlas       105 Jan  8 03:02 job.xml
[2026-01-08 06:09:40] -rw-r--r-- 2 boincer umatlas 225709816 Jan  8 03:02 EVNT.47898824._000300.pool.root.1
[2026-01-08 06:09:40] drwxrwx--x 2 boincer umatlas      4096 Jan  8 03:02 shared
[2026-01-08 06:09:40] -rw-r--r-- 2 boincer umatlas    592394 Jan  8 03:02 input.tar.gz
[2026-01-08 06:09:40] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 03:02 start_atlas.sh
[2026-01-08 06:09:40] -rw-r--r-- 1 boincer umatlas         0 Jan  8 03:02 boinc_lockfile
[2026-01-08 06:09:40] -rw-r--r-- 1 boincer umatlas      2518 Jan  8 03:02 pandaJob.out
[2026-01-08 06:09:40] -rw------- 1 boincer umatlas        57 Jan  8 03:02 setup.sh.local
[2026-01-08 06:09:40] -rw------- 1 boincer umatlas    989819 Jan  8 03:03 agis_schedconf.cvmfs.json
[2026-01-08 06:09:40] drwx------ 5 boincer umatlas      4096 Jan  8 03:03 pilot3
[2026-01-08 06:09:40] -rw-r--r-- 1 boincer umatlas      5909 Jan  8 06:00 init_data.xml
[2026-01-08 06:09:40] -rw------- 1 boincer umatlas 225361839 Jan  8 06:07 HITS.47898826._017059.pool.root.1
[2026-01-08 06:09:40] -rw-r--r-- 1 boincer umatlas       530 Jan  8 06:08 boinc_task_state.xml
[2026-01-08 06:09:40] -rw------- 1 boincer umatlas      1050 Jan  8 06:08 memory_monitor_summary.json
[2026-01-08 06:09:40] -rw------- 1 boincer umatlas   1516240 Jan  8 06:08 agis_ddmendpoints.agis.ALL.json
[2026-01-08 06:09:40] -rw------- 1 boincer umatlas    415313 Jan  8 06:08 log.47898826._017059.job.log.tgz.1
[2026-01-08 06:09:40] -rw------- 1 boincer umatlas      7848 Jan  8 06:08 heartbeat.json
[2026-01-08 06:09:40] -rw------- 1 boincer umatlas        95 Jan  8 06:09 pilot_heartbeat.json
[2026-01-08 06:09:40] -rw-r--r-- 1 boincer umatlas        28 Jan  8 06:09 wrapper_checkpoint.txt
[2026-01-08 06:09:40] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 06:09 boinc_mmap_file
[2026-01-08 06:09:40] -rw------- 1 boincer umatlas      4818 Jan  8 06:09 pilotlog.txt
[2026-01-08 06:09:40] -rw------- 1 boincer umatlas   1549124 Jan  8 06:09 log.47898826._017059.job.log.1
[2026-01-08 06:09:40] -rw------- 1 boincer umatlas       357 Jan  8 06:09 output.list
[2026-01-08 06:09:40] -rw-r--r-- 1 boincer umatlas       620 Jan  8 06:09 runtime_log
[2026-01-08 06:09:40] -rw------- 1 boincer umatlas   1986560 Jan  8 06:09 result.tar.gz
[2026-01-08 06:09:40] -rw-r--r-- 1 boincer umatlas      9343 Jan  8 06:09 runtime_log.err
[2026-01-08 06:09:40] -rw------- 1 boincer umatlas       663 Jan  8 06:09 LjcMDmw6zx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmBEeKDmMJkPKm.diag
[2026-01-08 06:09:40] -rw-r--r-- 1 boincer umatlas     20872 Jan  8 06:09 stderr.txt
[2026-01-08 06:09:40] HITS file was successfully produced:
[2026-01-08 06:09:40] -rw------- 1 boincer umatlas 225361839 Jan  8 06:07 shared/HITS.pool.root.1
[2026-01-08 06:09:40]  *** Contents of shared directory: ***
[2026-01-08 06:09:40] total 443040
[2026-01-08 06:09:40] -rw-r--r-- 2 boincer umatlas 225709816 Jan  8 03:02 ATLAS.root_0
[2026-01-08 06:09:40] -rw-r--r-- 2 boincer umatlas    592394 Jan  8 03:02 input.tar.gz
[2026-01-08 06:09:40] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 03:02 start_atlas.sh
[2026-01-08 06:09:40] -rw------- 1 boincer umatlas 225361839 Jan  8 06:07 HITS.pool.root.1
[2026-01-08 06:09:40] -rw------- 1 boincer umatlas   1986560 Jan  8 06:09 result.tar.gz
06:09:42 (11651): run_atlas exited; CPU time 83030.244159
06:09:42 (11651): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN