Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:21:06 (9003): wrapper (7.7.26015): starting
15:21:06 (9003): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 15:21:06] Arguments: --nthreads 8
[2026-01-08 15:21:06] Threads: 8
[2026-01-08 15:21:06] Checking for CVMFS
[2026-01-08 15:21:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 15:21:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 15:21:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 15:21:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 15:21:09] 2.11.2.0 18097 34087 125412 154910 1 60 19761859 25165824 96 130560 0 14392692 99.738 12754797 2630 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 15:21:09] CVMFS is ok
[2026-01-08 15:21:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 15:21:09] Checking for apptainer binary...
[2026-01-08 15:21:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 15:21:09] Running /usr/bin/apptainer --version
[2026-01-08 15:21:10] apptainer version 1.3.2-1.el7
[2026-01-08 15:21:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 15:21:24] cg-vwn387.simple-grid.lan
[2026-01-08 15:21:24] apptainer works
[2026-01-08 15:21:24] Set ATHENA_PROC_NUMBER=8
[2026-01-08 15:21:24] Set ATHENA_CORE_NUMBER=8
[2026-01-08 15:21:24] Starting ATLAS job with PandaID=6962913711
[2026-01-08 15:21:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 21:37:33]  *** The last 200 lines of the pilot log: ***
[2026-01-08 21:37:33] 2026-01-08 20:36:17,875 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 21:37:33] 2026-01-08 20:36:17,876 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 21:37:33] 2026-01-08 20:36:17,878 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6962913711/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 21:37:33] 2026-01-08 20:36:17,879 | INFO     | extracted standard info from prmon json
[2026-01-08 21:37:33] 2026-01-08 20:36:17,879 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 21:37:33] 2026-01-08 20:36:17,879 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 21:37:33] 2026-01-08 20:36:17,880 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 21:37:33] 2026-01-08 20:36:17,880 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 21:37:33] 2026-01-08 20:36:17,894 | INFO     | fitting pss+swap vs Time
[2026-01-08 21:37:33] 2026-01-08 20:36:17,895 | INFO     | sum of square deviations: 13755764892.5
[2026-01-08 21:37:33] 2026-01-08 20:36:17,899 | INFO     | sum of deviations: 152461200400.99997
[2026-01-08 21:37:33] 2026-01-08 20:36:17,899 | INFO     | mean x: 1767893657.5
[2026-01-08 21:37:33] 2026-01-08 20:36:17,899 | INFO     | mean y: 2451841.2485875706
[2026-01-08 21:37:33] 2026-01-08 20:36:17,899 | INFO     | intersect: -19591892152.717308
[2026-01-08 21:37:33] 2026-01-08 20:36:17,900 | INFO     | chi2: 7.456122768687218
[2026-01-08 21:37:33] 2026-01-08 20:36:17,901 | INFO     | sum of square deviations: 13181084350.0
[2026-01-08 21:37:33] 2026-01-08 20:36:17,905 | INFO     | sum of deviations: 173763213408.99997
[2026-01-08 21:37:33] 2026-01-08 20:36:17,905 | INFO     | mean x: 1767893505.0
[2026-01-08 21:37:33] 2026-01-08 20:36:17,905 | INFO     | mean y: 2457422.828080229
[2026-01-08 21:37:33] 2026-01-08 20:36:17,905 | INFO     | intersect: -23303277389.019928
[2026-01-08 21:37:33] 2026-01-08 20:36:17,906 | INFO     | chi2: 6.727389656382237
[2026-01-08 21:37:33] 2026-01-08 20:36:17,914 | INFO     | current chi2=6.727389656382237 (change=9.773620082616837 %)
[2026-01-08 21:37:33] 2026-01-08 20:36:17,915 | INFO     | right removable region: 348
[2026-01-08 21:37:33] 2026-01-08 20:36:17,915 | INFO     | sum of square deviations: 13181084350.0
[2026-01-08 21:37:33] 2026-01-08 20:36:17,919 | INFO     | sum of deviations: 32734433538.000004
[2026-01-08 21:37:33] 2026-01-08 20:36:17,920 | INFO     | mean x: 1767893810.0
[2026-01-08 21:37:33] 2026-01-08 20:36:17,920 | INFO     | mean y: 2483593.581661891
[2026-01-08 21:37:33] 2026-01-08 20:36:17,920 | INFO     | intersect: -4387974800.358181
[2026-01-08 21:37:33] 2026-01-08 20:36:17,921 | INFO     | chi2: 2.9768844783838757
[2026-01-08 21:37:33] 2026-01-08 20:36:17,921 | INFO     | current chi2=2.9768844783838757 (change=60.07463167203176 %)
[2026-01-08 21:37:33] 2026-01-08 20:36:17,921 | INFO     | sum of square deviations: 12622636670.0
[2026-01-08 21:37:33] 2026-01-08 20:36:17,925 | INFO     | sum of deviations: -45306662004.0
[2026-01-08 21:37:33] 2026-01-08 20:36:17,926 | INFO     | mean x: 1767893962.5
[2026-01-08 21:37:33] 2026-01-08 20:36:17,926 | INFO     | mean y: 2504849.6918604653
[2026-01-08 21:37:33] 2026-01-08 20:36:17,926 | INFO     | intersect: 6348039171.238624
[2026-01-08 21:37:33] 2026-01-08 20:36:17,927 | INFO     | chi2: 0.959829435779572
[2026-01-08 21:37:33] 2026-01-08 20:36:17,927 | INFO     | current chi2=0.959829435779572 (change=67.7572494751071 %)
[2026-01-08 21:37:33] 2026-01-08 20:36:17,927 | INFO     | sum of square deviations: 12080189290.0
[2026-01-08 21:37:33] 2026-01-08 20:36:17,941 | INFO     | sum of deviations: -53929959395.0
[2026-01-08 21:37:33] 2026-01-08 20:36:17,941 | INFO     | mean x: 1767894115.0
[2026-01-08 21:37:33] 2026-01-08 20:36:17,941 | INFO     | mean y: 2507263.191740413
[2026-01-08 21:37:33] 2026-01-08 20:36:17,941 | INFO     | intersect: 7894971159.890287
[2026-01-08 21:37:33] 2026-01-08 20:36:17,942 | INFO     | chi2: 0.9210011198575476
[2026-01-08 21:37:33] 2026-01-08 20:36:17,942 | INFO     | current chi2=0.9210011198575476 (change=4.045334980843561 %)
[2026-01-08 21:37:33] 2026-01-08 20:36:17,942 | INFO     | left removable region: 30
[2026-01-08 21:37:33] 2026-01-08 20:36:17,943 | INFO     | sum of square deviations: 9971385099.5
[2026-01-08 21:37:33] 2026-01-08 20:36:17,946 | INFO     | sum of deviations: 3499286105.9999995
[2026-01-08 21:37:33] 2026-01-08 20:36:17,946 | INFO     | mean x: 1767894389.5
[2026-01-08 21:37:33] 2026-01-08 20:36:17,947 | INFO     | mean y: 2503383.7987421383
[2026-01-08 21:37:33] 2026-01-08 20:36:17,947 | INFO     | intersect: -617908746.7449782
[2026-01-08 21:37:33] 2026-01-08 20:36:17,947 | INFO     | chi2: 0.02603918963420347
[2026-01-08 21:37:33] 2026-01-08 20:36:17,948 | INFO     | current memory leak: 0.35 B/s (using 318 data points, chi2=0.03)
[2026-01-08 21:37:33] 2026-01-08 20:36:17,948 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-08 21:37:33] 2026-01-08 20:36:17,949 | INFO     | ..............................
[2026-01-08 21:37:33] 2026-01-08 20:36:17,949 | INFO     | . Timing measurements:
[2026-01-08 21:37:33] 2026-01-08 20:36:17,949 | INFO     | . get job = 0 s
[2026-01-08 21:37:33] 2026-01-08 20:36:17,949 | INFO     | . initial setup = 11 s
[2026-01-08 21:37:33] 2026-01-08 20:36:17,949 | INFO     | . payload setup = 163 s
[2026-01-08 21:37:33] 2026-01-08 20:36:17,949 | INFO     | . stage-in = 0 s
[2026-01-08 21:37:33] 2026-01-08 20:36:17,949 | INFO     | . payload execution = 21749 s
[2026-01-08 21:37:33] 2026-01-08 20:36:17,949 | INFO     | . stage-out = 3 s
[2026-01-08 21:37:33] 2026-01-08 20:36:17,950 | INFO     | . log creation = 1 s
[2026-01-08 21:37:33] 2026-01-08 20:36:17,950 | INFO     | ..............................
[2026-01-08 21:37:33] 2026-01-08 20:36:18,134 | INFO     | 
[2026-01-08 21:37:33] 2026-01-08 20:36:18,134 | INFO     | job summary report
[2026-01-08 21:37:33] 2026-01-08 20:36:18,134 | INFO     | --------------------------------------------------
[2026-01-08 21:37:33] 2026-01-08 20:36:18,134 | INFO     | PanDA job id: 6962913711
[2026-01-08 21:37:33] 2026-01-08 20:36:18,135 | INFO     | task id: 47898826
[2026-01-08 21:37:33] 2026-01-08 20:36:18,135 | INFO     | errors: (none)
[2026-01-08 21:37:33] 2026-01-08 20:36:18,135 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 21:37:33] 2026-01-08 20:36:18,135 | INFO     | pilot state: finished 
[2026-01-08 21:37:33] 2026-01-08 20:36:18,135 | INFO     | transexitcode: 0
[2026-01-08 21:37:33] 2026-01-08 20:36:18,135 | INFO     | exeerrorcode: 0
[2026-01-08 21:37:33] 2026-01-08 20:36:18,135 | INFO     | exeerrordiag: 
[2026-01-08 21:37:33] 2026-01-08 20:36:18,135 | INFO     | exitcode: 0
[2026-01-08 21:37:33] 2026-01-08 20:36:18,135 | INFO     | exitmsg: OK
[2026-01-08 21:37:33] 2026-01-08 20:36:18,136 | INFO     | cpuconsumptiontime: 81800 s
[2026-01-08 21:37:33] 2026-01-08 20:36:18,136 | INFO     | nevents: 400
[2026-01-08 21:37:33] 2026-01-08 20:36:18,136 | INFO     | neventsw: 0
[2026-01-08 21:37:33] 2026-01-08 20:36:18,136 | INFO     | pid: 19268
[2026-01-08 21:37:33] 2026-01-08 20:36:18,136 | INFO     | pgrp: 19268
[2026-01-08 21:37:33] 2026-01-08 20:36:18,136 | INFO     | corecount: 8
[2026-01-08 21:37:33] 2026-01-08 20:36:18,136 | INFO     | event service: False
[2026-01-08 21:37:33] 2026-01-08 20:36:18,136 | INFO     | sizes: {0: 2283138, 1: 2283824, 2: 2284023, 13: 2284023, 24: 2284079, 34: 2284107, 45: 2284263, 56: 2284291, 67: 2284319, 77: 2284347, 88: 2284403, 99: 2284711, 10
[2026-01-08 21:37:33] 2026-01-08 20:36:18,136 | INFO     | --------------------------------------------------
[2026-01-08 21:37:33] 2026-01-08 20:36:18,137 | INFO     | 
[2026-01-08 21:37:33] 2026-01-08 20:36:18,137 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2026-01-08 21:37:33] 2026-01-08 20:36:18,572 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 21:37:33] 2026-01-08 20:36:18,572 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 21:37:33] 2026-01-08 20:36:18,572 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 21:37:33] 2026-01-08 20:36:18,572 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 21:37:33] 2026-01-08 20:36:18,572 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 21:37:33] 2026-01-08 20:36:18,573 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 21:37:33] 2026-01-08 20:36:18,573 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 21:37:33] 2026-01-08 20:36:18,573 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 21:37:33] 2026-01-08 20:36:18,573 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 21:37:33] 2026-01-08 20:36:18,573 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 21:37:33] 2026-01-08 20:36:18,573 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 21:37:33] 2026-01-08 20:36:18,573 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 21:37:33] 2026-01-08 20:36:18,573 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 21:37:33] 2026-01-08 20:36:18,574 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 21:37:33] 2026-01-08 20:36:18,574 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 21:37:33] 2026-01-08 20:36:18,574 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 21:37:33] 2026-01-08 20:36:18,574 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 21:37:33] 2026-01-08 20:36:18,574 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 21:37:33] 2026-01-08 20:36:18,574 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 21:37:33] 2026-01-08 20:36:18,574 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 21:37:33] 2026-01-08 20:36:18,574 | INFO     | job 6962913711 has completed (purged errors)
[2026-01-08 21:37:33] 2026-01-08 20:36:18,575 | INFO     | overall cleanup function is called
[2026-01-08 21:37:33] 2026-01-08 20:36:19,583 | INFO     | --- collectZombieJob: --- 10, [19268]
[2026-01-08 21:37:33] 2026-01-08 20:36:19,583 | INFO     | zombie collector waiting for pid 19268
[2026-01-08 21:37:33] 2026-01-08 20:36:19,584 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 21:37:33] 2026-01-08 20:36:19,584 | INFO     | collected zombie processes
[2026-01-08 21:37:33] 2026-01-08 20:36:19,584 | INFO     | will attempt to kill all subprocesses of pid=19268
[2026-01-08 21:37:33] 2026-01-08 20:36:19,678 | INFO     | process IDs to be killed: [19268] (in reverse order)
[2026-01-08 21:37:33] 2026-01-08 20:36:20,654 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 21:37:33] 2026-01-08 20:36:20,654 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 21:37:33] 2026-01-08 20:36:20,657 | INFO     | did not find any defunct processes belonging to 19268
[2026-01-08 21:37:33] 2026-01-08 20:36:20,658 | INFO     | did not find any defunct processes belonging to 19268
[2026-01-08 21:37:33] 2026-01-08 20:36:20,659 | INFO     | ready for new job
[2026-01-08 21:37:33] 2026-01-08 20:36:20,659 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 21:37:33] 2026-01-08 20:36:20,661 | INFO     | ***************************************
[2026-01-08 21:37:33] 2026-01-08 20:36:20,662 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 21:37:33] 2026-01-08 20:36:20,662 | INFO     | ***************************************
[2026-01-08 21:37:33] 2026-01-08 20:36:20,662 | INFO     | 
[2026-01-08 21:37:33] 2026-01-08 20:36:20,662 | INFO     | pilot is running in a VM
[2026-01-08 21:37:33] 2026-01-08 20:36:20,662 | INFO     | architecture information:
[2026-01-08 21:37:33] 2026-01-08 20:36:20,672 | INFO     | executing command: cat /etc/os-release
[2026-01-08 21:37:33] 2026-01-08 20:36:20,814 | INFO     | cat /etc/os-release:
[2026-01-08 21:37:33] NAME="CentOS Linux"
[2026-01-08 21:37:33] VERSION="7 (Core)"
[2026-01-08 21:37:33] ID="centos"
[2026-01-08 21:37:33] ID_LIKE="rhel fedora"
[2026-01-08 21:37:33] VERSION_ID="7"
[2026-01-08 21:37:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 21:37:33] ANSI_COLOR="0;31"
[2026-01-08 21:37:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 21:37:33] HOME_URL="https://www.centos.org/"
[2026-01-08 21:37:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 21:37:33] 
[2026-01-08 21:37:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 21:37:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 21:37:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 21:37:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 21:37:33] 
[2026-01-08 21:37:33] 2026-01-08 20:36:20,814 | INFO     | ***************************************
[2026-01-08 21:37:33] 2026-01-08 20:36:21,317 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2026-01-08 21:37:33] 2026-01-08 20:36:21,557 | INFO     | sufficient remaining disk space (496385392640 B)
[2026-01-08 21:37:33] 2026-01-08 20:36:21,557 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 21:37:33] 2026-01-08 20:36:21,557 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 21:37:33] 2026-01-08 20:36:21,558 | INFO     | update_server=False
[2026-01-08 21:37:33] 2026-01-08 20:36:21,558 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 21:37:33] 2026-01-08 20:36:21,558 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 21:37:33] 2026-01-08 20:36:21,847 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 21:37:33] 2026-01-08 20:36:22,146 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:37:33] 2026-01-08 20:36:22,147 | INFO     | aborting loop
[2026-01-08 21:37:33] 2026-01-08 20:36:22,434 | INFO     | all job control threads have been joined
[2026-01-08 21:37:33] 2026-01-08 20:36:22,563 | INFO     | [job] retrieve thread has finished
[2026-01-08 21:37:33] 2026-01-08 20:36:22,597 | INFO     | all data control threads have been joined
[2026-01-08 21:37:33] 2026-01-08 20:36:22,628 | INFO     | [payload] validate_post thread has finished
[2026-01-08 21:37:33] 2026-01-08 20:36:22,725 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 21:37:33] 2026-01-08 20:36:22,986 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 21:37:33] 2026-01-08 20:36:22,998 | INFO     | all payload control threads have been joined
[2026-01-08 21:37:33] 2026-01-08 20:36:23,080 | INFO     | [job] validate thread has finished
[2026-01-08 21:37:33] 2026-01-08 20:36:23,149 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 21:37:33] 2026-01-08 20:36:23,152 | INFO     | [job] job monitor thread has finished
[2026-01-08 21:37:33] 2026-01-08 20:36:23,372 | INFO     | [data] copytool_in thread has finished
[2026-01-08 21:37:33] 2026-01-08 20:36:23,440 | INFO     | [job] control thread has finished
[2026-01-08 21:37:33] 2026-01-08 20:36:23,603 | INFO     | [data] control thread has finished
[2026-01-08 21:37:33] 2026-01-08 20:36:23,628 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 21:37:33] 2026-01-08 20:36:23,854 | INFO     | [data] copytool_out thread has finished
[2026-01-08 21:37:33] 2026-01-08 20:36:23,960 | INFO     | [payload] failed_post thread has finished
[2026-01-08 21:37:33] 2026-01-08 20:36:24,004 | INFO     | [payload] control thread has finished
[2026-01-08 21:37:33] 2026-01-08 20:36:24,155 | INFO     | [job] queue monitor thread has finished
[2026-01-08 21:37:33] 2026-01-08 20:36:25,567 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 21:37:33] 2026-01-08 20:36:32,292 | INFO     | job.realtimelogging is not enabled
[2026-01-08 21:37:33] 2026-01-08 20:36:33,298 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 21:37:33] 2026-01-08 20:36:49,944 | INFO     | PID=12725 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 21:37:33] 2026-01-08 20:36:49,944 | INFO     | .. there are 2 such processes running
[2026-01-08 21:37:33] 2026-01-08 20:36:49,944 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 21:37:33] 2026-01-08 20:36:49,944 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 21:37:33] 2026-01-08 20:36:49,944 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 21:37:33] 2026-01-08 20:37:20,887 | INFO     | [monitor] cgroup control has ended
[2026-01-08 21:37:33] 2026-01-08 20:37:21,913 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140655010010944)>', '<ExcThread(monitor, started 140654122358528)>']
[2026-01-08 21:37:33] 2026-01-08 20:37:22,136 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 21:37:33] 2026-01-08 20:37:22,137 | INFO     | [monitor] control thread has ended
[2026-01-08 21:37:33] 2026-01-08 20:37:26,939 | INFO     | all workflow threads have been joined
[2026-01-08 21:37:33] 2026-01-08 20:37:26,939 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 21:37:33] 2026-01-08 20:37:26,940 | INFO     | traces error code: 0
[2026-01-08 21:37:33] 2026-01-08 20:37:26,940 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 21:37:33] 2026-01-08 20:37:27,388 [wrapper] ==== pilot stdout END ====
[2026-01-08 21:37:33] 2026-01-08 20:37:27,489 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 21:37:33] 2026-01-08 20:37:27,551 [wrapper] pilotpid: 12725
[2026-01-08 21:37:33] 2026-01-08 20:37:27,651 [wrapper] Pilot exit status: 0
[2026-01-08 21:37:33] 2026-01-08 20:37:28,245 [wrapper] pandaids: 6962913711
[2026-01-08 21:37:33] 2026-01-08 20:37:29,282 [wrapper] cleanup supervisor_pilot 18548 12726
[2026-01-08 21:37:33] 2026-01-08 20:37:29,374 [wrapper] Test setup, not cleaning
[2026-01-08 21:37:33] 2026-01-08 20:37:29,471 [wrapper] apfmon messages muted
[2026-01-08 21:37:33] 2026-01-08 20:37:29,620 [wrapper] ==== wrapper stdout END ====
[2026-01-08 21:37:33] 2026-01-08 20:37:29,763 [wrapper] ==== wrapper stderr END ====
[2026-01-08 21:37:33]  *** Error codes and diagnostics ***
[2026-01-08 21:37:33]     "exeErrorCode": 0,
[2026-01-08 21:37:33]     "exeErrorDiag": "",
[2026-01-08 21:37:33]     "pilotErrorCode": 0,
[2026-01-08 21:37:33]     "pilotErrorDiag": "",
[2026-01-08 21:37:33]  *** Listing of results directory ***
[2026-01-08 21:37:33] total 448420
[2026-01-08 21:37:33] -rw-r--r--. 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-08 21:37:33] -rw-r--r--. 1 boinc boinc      5112 Jan  8 08:59 queuedata.json
[2026-01-08 21:37:33] -rwx------. 1 boinc boinc     36322 Jan  8 08:59 runpilot2-wrapper.sh
[2026-01-08 21:37:33] -rw-r--r--. 1 boinc boinc       100 Jan  8 15:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 21:37:33] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 15:21 run_atlas
[2026-01-08 21:37:33] -rw-r--r--. 1 boinc boinc       105 Jan  8 15:21 job.xml
[2026-01-08 21:37:33] -rw-r--r--. 2 boinc boinc 225709816 Jan  8 15:21 EVNT.47898824._000300.pool.root.1
[2026-01-08 21:37:33] -rw-r--r--. 1 boinc boinc      6391 Jan  8 15:21 init_data.xml
[2026-01-08 21:37:33] -rw-r--r--. 2 boinc boinc     15847 Jan  8 15:21 start_atlas.sh
[2026-01-08 21:37:33] drwxrwx--x. 2 boinc boinc        68 Jan  8 15:21 shared
[2026-01-08 21:37:33] -rw-r--r--. 2 boinc boinc    592398 Jan  8 15:21 input.tar.gz
[2026-01-08 21:37:33] -rw-r--r--. 1 boinc boinc         0 Jan  8 15:21 boinc_lockfile
[2026-01-08 21:37:33] -rw-r--r--. 1 boinc boinc      2517 Jan  8 15:21 pandaJob.out
[2026-01-08 21:37:33] -rw-------. 1 boinc boinc    989835 Jan  8 15:25 agis_schedconf.cvmfs.json
[2026-01-08 21:37:33] drwx------. 5 boinc boinc      4096 Jan  8 15:25 pilot3
[2026-01-08 21:37:33] -rw-------. 1 boinc boinc 222588825 Jan  8 21:32 HITS.47898826._017051.pool.root.1
[2026-01-08 21:37:33] -rw-r--r--. 1 boinc boinc       531 Jan  8 21:33 boinc_task_state.xml
[2026-01-08 21:37:33] -rw-------. 1 boinc boinc      1016 Jan  8 21:34 memory_monitor_summary.json
[2026-01-08 21:37:33] -rw-------. 1 boinc boinc   1516240 Jan  8 21:34 agis_ddmendpoints.agis.ALL.json
[2026-01-08 21:37:33] -rw-------. 1 boinc boinc    546815 Jan  8 21:34 log.47898826._017051.job.log.tgz.1
[2026-01-08 21:37:33] -rw-------. 1 boinc boinc        95 Jan  8 21:36 pilot_heartbeat.json
[2026-01-08 21:37:33] -rw-------. 1 boinc boinc      7778 Jan  8 21:36 heartbeat.json
[2026-01-08 21:37:33] -rw-r--r--. 1 boinc boinc      8192 Jan  8 21:37 boinc_mmap_file
[2026-01-08 21:37:33] -rw-r--r--. 1 boinc boinc        28 Jan  8 21:37 wrapper_checkpoint.txt
[2026-01-08 21:37:33] -rw-------. 1 boinc boinc      4957 Jan  8 21:37 pilotlog.txt
[2026-01-08 21:37:33] -rw-------. 1 boinc boinc   2947316 Jan  8 21:37 log.47898826._017051.job.log.1
[2026-01-08 21:37:33] -rw-------. 1 boinc boinc       357 Jan  8 21:37 output.list
[2026-01-08 21:37:33] -rw-r--r--. 1 boinc boinc       620 Jan  8 21:37 runtime_log
[2026-01-08 21:37:33] -rw-------. 1 boinc boinc   3512320 Jan  8 21:37 result.tar.gz
[2026-01-08 21:37:33] -rw-------. 1 boinc boinc       657 Jan  8 21:37 ZNSMDmw6zx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3DeKDmuozkWn.diag
[2026-01-08 21:37:33] -rw-r--r--. 1 boinc boinc      8833 Jan  8 21:37 runtime_log.err
[2026-01-08 21:37:33] -rw-r--r--. 1 boinc boinc     20505 Jan  8 21:37 stderr.txt
[2026-01-08 21:37:33] HITS file was successfully produced:
[2026-01-08 21:37:33] -rw-------. 1 boinc boinc 222588825 Jan  8 21:32 shared/HITS.pool.root.1
[2026-01-08 21:37:33]  *** Contents of shared directory: ***
[2026-01-08 21:37:33] total 441820
[2026-01-08 21:37:33] -rw-r--r--. 2 boinc boinc 225709816 Jan  8 15:21 ATLAS.root_0
[2026-01-08 21:37:33] -rw-r--r--. 2 boinc boinc     15847 Jan  8 15:21 start_atlas.sh
[2026-01-08 21:37:33] -rw-r--r--. 2 boinc boinc    592398 Jan  8 15:21 input.tar.gz
[2026-01-08 21:37:33] -rw-------. 1 boinc boinc 222588825 Jan  8 21:32 HITS.pool.root.1
[2026-01-08 21:37:33] -rw-------. 1 boinc boinc   3512320 Jan  8 21:37 result.tar.gz
21:37:34 (9003): run_atlas exited; CPU time 82028.958005
21:37:34 (9003): called boinc_finish(0)

</stderr_txt>
]]>

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