Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:49:20 (3744017): wrapper (7.7.26015): starting
15:49:20 (3744017): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 15:49:20] Arguments: --nthreads 8
[2026-01-08 15:49:20] Threads: 8
[2026-01-08 15:49:20] Checking for CVMFS
[2026-01-08 15:49:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 15:49:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 15:49:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 15:49:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 15:49:24] 2.13.3.0 8602 92385 422212 154919 1 592 20865583 21042177 26613 16776704 0 366471781 99.428 525997617 33352 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 15:49:24] CVMFS is ok
[2026-01-08 15:49:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 15:49:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 15:49:24] Further information can be found at the LHC@home message board.
[2026-01-08 15:49:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 15:49:24] Checking for apptainer binary...
[2026-01-08 15:49:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 15:49:24] Running /usr/bin/apptainer --version
[2026-01-08 15:49:25] apptainer version 1.4.5-2.el9
[2026-01-08 15:49:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 15:49:26] c-16-16.aglt2.org
[2026-01-08 15:49:26] apptainer works
[2026-01-08 15:49:26] Set ATHENA_PROC_NUMBER=8
[2026-01-08 15:49:26] Set ATHENA_CORE_NUMBER=8
[2026-01-08 15:49:27] Starting ATLAS job with PandaID=6962915787
[2026-01-08 15:49:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:02:54]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:02:54] 2026-01-10 01:01:49,070 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 20:02:54] 2026-01-10 01:01:49,084 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2900.0053499999995
[2026-01-09 20:02:54] 2026-01-10 01:01:49,101 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962915787/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:02:54] 2026-01-10 01:01:49,102 | INFO     | extracted standard info from prmon json
[2026-01-09 20:02:54] 2026-01-10 01:01:49,102 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:02:54] 2026-01-10 01:01:49,103 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:02:54] 2026-01-10 01:01:49,103 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 20:02:54] 2026-01-10 01:01:49,103 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:02:54] 2026-01-10 01:01:49,189 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:02:54] 2026-01-10 01:01:49,191 | INFO     | sum of square deviations: 1415820711184.448
[2026-01-09 20:02:54] 2026-01-10 01:01:49,298 | INFO     | sum of deviations: 1685535974461.271
[2026-01-09 20:02:54] 2026-01-10 01:01:49,298 | INFO     | mean x: 1767956281.217601
[2026-01-09 20:02:54] 2026-01-10 01:01:49,299 | INFO     | mean y: 2510901.600361664
[2026-01-09 20:02:54] 2026-01-10 01:01:49,299 | INFO     | intersect: -2102242821.6122777
[2026-01-09 20:02:54] 2026-01-10 01:01:49,301 | INFO     | chi2: 4.380746308371287
[2026-01-09 20:02:54] 2026-01-10 01:01:49,303 | INFO     | sum of square deviations: 1403058325184.5088
[2026-01-09 20:02:54] 2026-01-10 01:01:49,403 | INFO     | sum of deviations: 1780189737216.858
[2026-01-09 20:02:54] 2026-01-10 01:01:49,404 | INFO     | mean x: 1767956128.7212818
[2026-01-09 20:02:54] 2026-01-10 01:01:49,404 | INFO     | mean y: 2512029.5181378475
[2026-01-09 20:02:54] 2026-01-10 01:01:49,404 | INFO     | intersect: -2240657266.9438515
[2026-01-09 20:02:54] 2026-01-10 01:01:49,407 | INFO     | chi2: 3.699108978585262
[2026-01-09 20:02:54] 2026-01-10 01:01:49,407 | INFO     | current chi2=3.699108978585262 (change=15.559844871260081 %)
[2026-01-09 20:02:54] 2026-01-10 01:01:49,407 | INFO     | right removable region: 1653
[2026-01-09 20:02:54] 2026-01-10 01:01:49,409 | INFO     | sum of square deviations: 1403057092984.512
[2026-01-09 20:02:54] 2026-01-10 01:01:49,526 | INFO     | sum of deviations: 1211486835988.976
[2026-01-09 20:02:54] 2026-01-10 01:01:49,526 | INFO     | mean x: 1767956433.7212818
[2026-01-09 20:02:54] 2026-01-10 01:01:49,527 | INFO     | mean y: 2516563.8047158406
[2026-01-09 20:02:54] 2026-01-10 01:01:49,527 | INFO     | intersect: -1524047078.377016
[2026-01-09 20:02:54] 2026-01-10 01:01:49,529 | INFO     | chi2: 1.4872453533427141
[2026-01-09 20:02:54] 2026-01-10 01:01:49,530 | INFO     | current chi2=1.4872453533427141 (change=66.05041130775602 %)
[2026-01-09 20:02:54] 2026-01-10 01:01:49,532 | INFO     | sum of square deviations: 1390370910690.766
[2026-01-09 20:02:54] 2026-01-10 01:01:49,638 | INFO     | sum of deviations: 1025687674388.8796
[2026-01-09 20:02:54] 2026-01-10 01:01:49,638 | INFO     | mean x: 1767956586.2219527
[2026-01-09 20:02:54] 2026-01-10 01:01:49,638 | INFO     | mean y: 2518795.478471801
[2026-01-09 20:02:54] 2026-01-10 01:01:49,639 | INFO     | intersect: -1301716833.5894406
[2026-01-09 20:02:54] 2026-01-10 01:01:49,641 | INFO     | chi2: 0.9818564868706647
[2026-01-09 20:02:54] 2026-01-10 01:01:49,641 | INFO     | current chi2=0.9818564868706647 (change=33.98153945051122 %)
[2026-01-09 20:02:54] 2026-01-10 01:01:49,644 | INFO     | sum of square deviations: 1377761126228.1768
[2026-01-09 20:02:54] 2026-01-10 01:01:49,727 | INFO     | sum of deviations: 966563405146.948
[2026-01-09 20:02:54] 2026-01-10 01:01:49,727 | INFO     | mean x: 1767956738.7244525
[2026-01-09 20:02:54] 2026-01-10 01:01:49,727 | INFO     | mean y: 2519510.1654501217
[2026-01-09 20:02:54] 2026-01-10 01:01:49,727 | INFO     | intersect: -1237784235.5297172
[2026-01-09 20:02:54] 2026-01-10 01:01:49,731 | INFO     | chi2: 0.9452303837449144
[2026-01-09 20:02:54] 2026-01-10 01:01:49,731 | INFO     | current chi2=0.9452303837449144 (change=3.730290894393704 %)
[2026-01-09 20:02:54] 2026-01-10 01:01:49,731 | INFO     | left removable region: 30
[2026-01-09 20:02:54] 2026-01-10 01:01:49,734 | INFO     | sum of square deviations: 1325634066526.4956
[2026-01-09 20:02:54] 2026-01-10 01:01:49,774 | INFO     | monitor loop #4056: job 0:6962915787 is in state 'finished'
[2026-01-09 20:02:54] 2026-01-10 01:01:49,774 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:02:54] 2026-01-10 01:01:49,823 | INFO     | sum of deviations: 867985849155.2601
[2026-01-09 20:02:54] 2026-01-10 01:01:49,823 | INFO     | mean x: 1767957013.2335181
[2026-01-09 20:02:54] 2026-01-10 01:01:49,824 | INFO     | mean y: 2523029.1312384475
[2026-01-09 20:02:54] 2026-01-10 01:01:49,824 | INFO     | intersect: -1155082759.789411
[2026-01-09 20:02:54] 2026-01-10 01:01:49,826 | INFO     | chi2: 0.0650883239983191
[2026-01-09 20:02:54] 2026-01-10 01:01:49,827 | INFO     | current memory leak: 0.65 B/s (using 1623 data points, chi2=0.07)
[2026-01-09 20:02:54] 2026-01-10 01:01:49,829 | INFO     | could have reported an average CPU frequency of 2900 MHz (58 samples)
[2026-01-09 20:02:54] 2026-01-10 01:01:49,829 | INFO     | ..............................
[2026-01-09 20:02:54] 2026-01-10 01:01:49,829 | INFO     | . Timing measurements:
[2026-01-09 20:02:54] 2026-01-10 01:01:49,829 | INFO     | . get job = 1 s
[2026-01-09 20:02:54] 2026-01-10 01:01:49,833 | INFO     | . initial setup = 9 s
[2026-01-09 20:02:54] 2026-01-10 01:01:49,833 | INFO     | . payload setup = 69 s
[2026-01-09 20:02:54] 2026-01-10 01:01:49,833 | INFO     | . stage-in = 1 s
[2026-01-09 20:02:54] 2026-01-10 01:01:49,833 | INFO     | . payload execution = 101219 s
[2026-01-09 20:02:54] 2026-01-10 01:01:49,834 | INFO     | . stage-out = 4 s
[2026-01-09 20:02:54] 2026-01-10 01:01:49,834 | INFO     | . log creation = 1 s
[2026-01-09 20:02:54] 2026-01-10 01:01:49,834 | INFO     | ..............................
[2026-01-09 20:02:54] 2026-01-10 01:01:50,288 | INFO     | 
[2026-01-09 20:02:54] 2026-01-10 01:01:50,288 | INFO     | job summary report
[2026-01-09 20:02:54] 2026-01-10 01:01:50,288 | INFO     | --------------------------------------------------
[2026-01-09 20:02:54] 2026-01-10 01:01:50,288 | INFO     | PanDA job id: 6962915787
[2026-01-09 20:02:54] 2026-01-10 01:01:50,288 | INFO     | task id: 47898826
[2026-01-09 20:02:54] 2026-01-10 01:01:50,289 | INFO     | errors: (none)
[2026-01-09 20:02:54] 2026-01-10 01:01:50,289 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:02:54] 2026-01-10 01:01:50,289 | INFO     | pilot state: finished 
[2026-01-09 20:02:54] 2026-01-10 01:01:50,289 | INFO     | transexitcode: 0
[2026-01-09 20:02:54] 2026-01-10 01:01:50,289 | INFO     | exeerrorcode: 0
[2026-01-09 20:02:54] 2026-01-10 01:01:50,289 | INFO     | exeerrordiag: 
[2026-01-09 20:02:54] 2026-01-10 01:01:50,290 | INFO     | exitcode: 0
[2026-01-09 20:02:54] 2026-01-10 01:01:50,290 | INFO     | exitmsg: OK
[2026-01-09 20:02:54] 2026-01-10 01:01:50,290 | INFO     | cpuconsumptiontime: 112154 s
[2026-01-09 20:02:54] 2026-01-10 01:01:50,290 | INFO     | nevents: 400
[2026-01-09 20:02:54] 2026-01-10 01:01:50,290 | INFO     | neventsw: 0
[2026-01-09 20:02:54] 2026-01-10 01:01:50,290 | INFO     | pid: 3763541
[2026-01-09 20:02:54] 2026-01-10 01:01:50,290 | INFO     | pgrp: 3763541
[2026-01-09 20:02:54] 2026-01-10 01:01:50,291 | INFO     | corecount: 8
[2026-01-09 20:02:54] 2026-01-10 01:01:50,291 | INFO     | event service: False
[2026-01-09 20:02:54] 2026-01-10 01:01:50,291 | INFO     | sizes: {0: 2283134, 1: 2283735, 2: 2283819, 3: 2283875, 4: 2283875, 5: 2284046, 6: 2284230, 18: 2284258, 29: 2284286, 41: 2284314, 53: 2284342, 60: 2284912, 65: 22
[2026-01-09 20:02:54] 2026-01-10 01:01:50,291 | INFO     | --------------------------------------------------
[2026-01-09 20:02:54] 2026-01-10 01:01:50,291 | INFO     | 
[2026-01-09 20:02:54] 2026-01-10 01:01:50,306 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 20:02:54] 2026-01-10 01:01:50,341 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:02:54] 2026-01-10 01:01:50,346 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:02:54] 2026-01-10 01:01:50,346 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:02:54] 2026-01-10 01:01:50,346 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:02:54] 2026-01-10 01:01:50,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:02:54] 2026-01-10 01:01:50,346 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:02:54] 2026-01-10 01:01:50,347 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:02:54] 2026-01-10 01:01:50,347 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:02:54] 2026-01-10 01:01:50,347 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:02:54] 2026-01-10 01:01:50,347 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:02:54] 2026-01-10 01:01:50,347 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:02:54] 2026-01-10 01:01:50,347 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:02:54] 2026-01-10 01:01:50,347 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:02:54] 2026-01-10 01:01:50,348 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:02:54] 2026-01-10 01:01:50,348 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:02:54] 2026-01-10 01:01:50,348 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:02:54] 2026-01-10 01:01:50,348 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:02:54] 2026-01-10 01:01:50,348 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:02:54] 2026-01-10 01:01:50,348 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:02:54] 2026-01-10 01:01:50,348 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:02:54] 2026-01-10 01:01:50,349 | INFO     | job 6962915787 has completed (purged errors)
[2026-01-09 20:02:54] 2026-01-10 01:01:50,349 | INFO     | overall cleanup function is called
[2026-01-09 20:02:54] 2026-01-10 01:01:51,364 | INFO     | --- collectZombieJob: --- 10, [3763541]
[2026-01-09 20:02:54] 2026-01-10 01:01:51,364 | INFO     | zombie collector waiting for pid 3763541
[2026-01-09 20:02:54] 2026-01-10 01:01:51,364 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:02:54] 2026-01-10 01:01:51,364 | INFO     | collected zombie processes
[2026-01-09 20:02:54] 2026-01-10 01:01:51,364 | INFO     | will attempt to kill all subprocesses of pid=3763541
[2026-01-09 20:02:54] 2026-01-10 01:01:52,411 | INFO     | process IDs to be killed: [3763541] (in reverse order)
[2026-01-09 20:02:54] 2026-01-10 01:01:52,687 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:02:54] 2026-01-10 01:01:52,688 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:02:54] 2026-01-10 01:01:52,748 | INFO     | did not find any defunct processes belonging to 3763541
[2026-01-09 20:02:54] 2026-01-10 01:01:52,783 | INFO     | did not find any defunct processes belonging to 3763541
[2026-01-09 20:02:54] 2026-01-10 01:01:52,783 | INFO     | ready for new job
[2026-01-09 20:02:54] 2026-01-10 01:01:52,783 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:02:54] 2026-01-10 01:01:52,789 | INFO     | ***************************************
[2026-01-09 20:02:54] 2026-01-10 01:01:52,789 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:02:54] 2026-01-10 01:01:52,789 | INFO     | ***************************************
[2026-01-09 20:02:54] 2026-01-10 01:01:52,789 | INFO     | 
[2026-01-09 20:02:54] 2026-01-10 01:01:52,791 | INFO     | architecture information:
[2026-01-09 20:02:54] 2026-01-10 01:01:52,792 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:02:54] 2026-01-10 01:01:52,855 | INFO     | cat /etc/os-release:
[2026-01-09 20:02:54] NAME="CentOS Linux"
[2026-01-09 20:02:54] VERSION="7 (Core)"
[2026-01-09 20:02:54] ID="centos"
[2026-01-09 20:02:54] ID_LIKE="rhel fedora"
[2026-01-09 20:02:54] VERSION_ID="7"
[2026-01-09 20:02:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:02:54] ANSI_COLOR="0;31"
[2026-01-09 20:02:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:02:54] HOME_URL="https://www.centos.org/"
[2026-01-09 20:02:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:02:54] 
[2026-01-09 20:02:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:02:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:02:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:02:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:02:54] 
[2026-01-09 20:02:54] 2026-01-10 01:01:52,855 | INFO     | ***************************************
[2026-01-09 20:02:54] 2026-01-10 01:01:53,359 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 20:02:54] 2026-01-10 01:01:53,428 | INFO     | sufficient remaining disk space (53539241984 B)
[2026-01-09 20:02:54] 2026-01-10 01:01:53,429 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:02:54] 2026-01-10 01:01:53,429 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:02:54] 2026-01-10 01:01:53,429 | INFO     | update_server=False
[2026-01-09 20:02:54] 2026-01-10 01:01:53,429 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:02:54] 2026-01-10 01:01:53,430 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:02:54] 2026-01-10 01:01:53,430 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:02:54] 2026-01-10 01:01:53,430 | INFO     | aborting loop
[2026-01-09 20:02:54] 2026-01-10 01:01:53,794 | INFO     | all data control threads have been joined
[2026-01-09 20:02:54] 2026-01-10 01:01:53,993 | INFO     | all job control threads have been joined
[2026-01-09 20:02:54] 2026-01-10 01:01:54,234 | INFO     | all payload control threads have been joined
[2026-01-09 20:02:54] 2026-01-10 01:01:54,437 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:02:54] 2026-01-10 01:01:54,438 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:02:54] 2026-01-10 01:01:54,754 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:02:54] 2026-01-10 01:01:54,774 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:02:54] 2026-01-10 01:01:54,775 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:02:54] 2026-01-10 01:01:54,800 | INFO     | [data] control thread has finished
[2026-01-09 20:02:54] 2026-01-10 01:01:54,900 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:02:54] 2026-01-10 01:01:54,932 | INFO     | [job] validate thread has finished
[2026-01-09 20:02:54] 2026-01-10 01:01:55,000 | INFO     | [job] control thread has finished
[2026-01-09 20:02:54] 2026-01-10 01:01:55,217 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:02:54] 2026-01-10 01:01:55,240 | INFO     | [payload] control thread has finished
[2026-01-09 20:02:54] 2026-01-10 01:01:55,351 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:02:54] 2026-01-10 01:01:55,376 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:02:54] 2026-01-10 01:01:55,439 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:02:54] 2026-01-10 01:01:55,769 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:02:54] 2026-01-10 01:01:56,224 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:02:54] 2026-01-10 01:01:56,742 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:02:54] 2026-01-10 01:02:00,751 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:02:54] 2026-01-10 01:02:22,500 | INFO     | PID=3750851 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 20:02:54] 2026-01-10 01:02:22,501 | INFO     | .. there are 40 such processes running
[2026-01-09 20:02:54] 2026-01-10 01:02:22,502 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:02:54] 2026-01-10 01:02:22,502 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:02:54] 2026-01-10 01:02:22,502 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:02:54] 2026-01-10 01:02:45,708 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:02:54] 2026-01-10 01:02:47,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140356418393920)>', '<ExcThread(monitor, started 140356066715392)>']
[2026-01-09 20:02:54] 2026-01-10 01:02:47,680 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:02:54] 2026-01-10 01:02:47,681 | INFO     | [monitor] control thread has ended
[2026-01-09 20:02:54] 2026-01-10 01:02:52,681 | INFO     | all workflow threads have been joined
[2026-01-09 20:02:54] 2026-01-10 01:02:52,681 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:02:54] 2026-01-10 01:02:52,681 | INFO     | traces error code: 0
[2026-01-09 20:02:54] 2026-01-10 01:02:52,682 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:02:54] 2026-01-10 01:02:52,884 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:02:54] 2026-01-10 01:02:52,925 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:02:54] 2026-01-10 01:02:52,967 [wrapper] pilotpid: 3750851
[2026-01-09 20:02:54] 2026-01-10 01:02:53,003 [wrapper] Pilot exit status: 0
[2026-01-09 20:02:54] 2026-01-10 01:02:53,162 [wrapper] pandaids: 6962915787
[2026-01-09 20:02:54] 2026-01-10 01:02:53,335 [wrapper] cleanup supervisor_pilot 3127803 3750852
[2026-01-09 20:02:54] 2026-01-10 01:02:53,339 [wrapper] Test setup, not cleaning
[2026-01-09 20:02:54] 2026-01-10 01:02:53,343 [wrapper] apfmon messages muted
[2026-01-09 20:02:54] 2026-01-10 01:02:53,346 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:02:54] 2026-01-10 01:02:53,350 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:02:54]  *** Error codes and diagnostics ***
[2026-01-09 20:02:54]     "exeErrorCode": 0,
[2026-01-09 20:02:54]     "exeErrorDiag": "",
[2026-01-09 20:02:54]     "pilotErrorCode": 0,
[2026-01-09 20:02:54]     "pilotErrorDiag": "",
[2026-01-09 20:02:54]  *** Listing of results directory ***
[2026-01-09 20:02:54] total 453240
[2026-01-09 20:02:54] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-09 20:02:54] -rwx------. 1 boincer umatlas     36322 Jan  8 02:58 runpilot2-wrapper.sh
[2026-01-09 20:02:54] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 02:58 queuedata.json
[2026-01-09 20:02:54] -rw-r--r--. 1 boincer umatlas       100 Jan  8 15:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:02:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 15:49 run_atlas
[2026-01-09 20:02:54] -rw-r--r--. 1 boincer umatlas       105 Jan  8 15:49 job.xml
[2026-01-09 20:02:54] -rw-r--r--. 2 boincer umatlas 227021340 Jan  8 15:49 EVNT.47898824._000433.pool.root.1
[2026-01-09 20:02:54] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 15:49 start_atlas.sh
[2026-01-09 20:02:54] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 15:49 shared
[2026-01-09 20:02:54] -rw-r--r--. 2 boincer umatlas    592395 Jan  8 15:49 input.tar.gz
[2026-01-09 20:02:54] -rw-r--r--. 1 boincer umatlas         0 Jan  8 15:49 boinc_lockfile
[2026-01-09 20:02:54] -rw-r--r--. 1 boincer umatlas      2515 Jan  8 15:49 pandaJob.out
[2026-01-09 20:02:54] -rw-------. 1 boincer umatlas        57 Jan  8 15:49 setup.sh.local
[2026-01-09 20:02:54] -rw-------. 1 boincer umatlas    989845 Jan  8 15:50 agis_schedconf.cvmfs.json
[2026-01-09 20:02:54] drwx------. 5 boincer umatlas      4096 Jan  8 15:51 pilot3
[2026-01-09 20:02:54] -rw-r--r--. 1 boincer umatlas      6525 Jan  9 19:58 init_data.xml
[2026-01-09 20:02:54] -rw-------. 1 boincer umatlas 211041199 Jan  9 20:00 HITS.47898826._018375.pool.root.1
[2026-01-09 20:02:54] -rw-r--r--. 1 boincer umatlas       532 Jan  9 20:00 boinc_task_state.xml
[2026-01-09 20:02:54] -rw-------. 1 boincer umatlas      1043 Jan  9 20:01 memory_monitor_summary.json
[2026-01-09 20:02:54] -rw-------. 1 boincer umatlas   1516240 Jan  9 20:01 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:02:54] -rw-------. 1 boincer umatlas   1324873 Jan  9 20:01 log.47898826._018375.job.log.tgz.1
[2026-01-09 20:02:54] -rw-------. 1 boincer umatlas      7826 Jan  9 20:01 heartbeat.json
[2026-01-09 20:02:54] -rw-------. 1 boincer umatlas        95 Jan  9 20:02 pilot_heartbeat.json
[2026-01-09 20:02:54] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 20:02 boinc_mmap_file
[2026-01-09 20:02:54] -rw-r--r--. 1 boincer umatlas        29 Jan  9 20:02 wrapper_checkpoint.txt
[2026-01-09 20:02:54] -rw-------. 1 boincer umatlas      4824 Jan  9 20:02 pilotlog.txt
[2026-01-09 20:02:54] -rw-------. 1 boincer umatlas   9743462 Jan  9 20:02 log.47898826._018375.job.log.1
[2026-01-09 20:02:54] -rw-------. 1 boincer umatlas       357 Jan  9 20:02 output.list
[2026-01-09 20:02:54] -rw-r--r--. 1 boincer umatlas       620 Jan  9 20:02 runtime_log
[2026-01-09 20:02:54] -rw-------. 1 boincer umatlas  11089920 Jan  9 20:02 result.tar.gz
[2026-01-09 20:02:54] -rw-r--r--. 1 boincer umatlas      9339 Jan  9 20:02 runtime_log.err
[2026-01-09 20:02:54] -rw-------. 1 boincer umatlas       661 Jan  9 20:02 KCgNDmn5zx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZJjKDmbKN7Gm.diag
[2026-01-09 20:02:54] -rw-r--r--. 1 boincer umatlas     21247 Jan  9 20:02 stderr.txt
[2026-01-09 20:02:54] HITS file was successfully produced:
[2026-01-09 20:02:54] -rw-------. 1 boincer umatlas 211041199 Jan  9 20:00 shared/HITS.pool.root.1
[2026-01-09 20:02:54]  *** Contents of shared directory: ***
[2026-01-09 20:02:54] total 439232
[2026-01-09 20:02:54] -rw-r--r--. 2 boincer umatlas 227021340 Jan  8 15:49 ATLAS.root_0
[2026-01-09 20:02:54] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 15:49 start_atlas.sh
[2026-01-09 20:02:54] -rw-r--r--. 2 boincer umatlas    592395 Jan  8 15:49 input.tar.gz
[2026-01-09 20:02:54] -rw-------. 1 boincer umatlas 211041199 Jan  9 20:00 HITS.pool.root.1
[2026-01-09 20:02:54] -rw-------. 1 boincer umatlas  11089920 Jan  9 20:02 result.tar.gz
20:02:55 (3744017): run_atlas exited; CPU time 117398.144323
20:02:55 (3744017): called boinc_finish(0)

</stderr_txt>
]]>

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