Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
07:47:49 (2489213): wrapper (7.7.26015): starting
07:47:49 (2489213): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 07:47:49] Arguments: --nthreads 4
[2026-01-08 07:47:49] Threads: 4
[2026-01-08 07:47:49] Checking for CVMFS
[2026-01-08 07:47:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 07:47:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 07:47:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 07:47:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 07:47:49] 2.13.3.0 180034 1269 53576 154908 3 11 2080327 4096000 6454 130560 0 6417342 99.998 52245 3228 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-08 07:47:49] CVMFS is ok
[2026-01-08 07:47:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 07:47:49] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-08 07:47:49] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-08 07:47:49] Further information can be found at the LHC@home message board.
[2026-01-08 07:47:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 07:47:49] Checking for apptainer binary...
[2026-01-08 07:47:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 07:47:49] Running /usr/bin/apptainer --version
[2026-01-08 07:47:49] apptainer version 1.4.1
[2026-01-08 07:47:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 07:47:49] linux-7950X
[2026-01-08 07:47:49] apptainer works
[2026-01-08 07:47:49] Set ATHENA_PROC_NUMBER=4
[2026-01-08 07:47:49] Set ATHENA_CORE_NUMBER=4
[2026-01-08 07:47:49] Starting ATLAS job with PandaID=6962323874
[2026-01-08 07:47:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 09:50:32]  *** The last 200 lines of the pilot log: ***
[2026-01-08 09:50:32] 2026-01-08 14:49:57,496 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-08 09:50:32] 2026-01-08 14:49:57,496 | INFO     | log transfer has been attempted: DONE
[2026-01-08 09:50:32] 2026-01-08 14:49:57,496 | INFO     | job 6962323874 has finished - writing final server update
[2026-01-08 09:50:32] 2026-01-08 14:49:57,496 | INFO     | total number of processed events: 400 (read)
[2026-01-08 09:50:32] 2026-01-08 14:49:57,497 | INFO     | executing command: lscpu
[2026-01-08 09:50:32] 2026-01-08 14:49:57,521 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 09:50:32] 2026-01-08 14:49:59,121 | INFO     | time since job start (7323s) is within the limit (174528.0s)
[2026-01-08 09:50:32] 2026-01-08 14:49:59,681 | INFO     | monitor loop #552: job 0:6962323874 is in state 'finished'
[2026-01-08 09:50:32] 2026-01-08 14:49:59,681 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 09:50:32] 2026-01-08 14:49:59,895 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-08 09:50:32] 2026-01-08 14:49:59,898 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4264.851875
[2026-01-08 09:50:32] 2026-01-08 14:49:59,902 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6962323874/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 09:50:32] 2026-01-08 14:49:59,902 | INFO     | extracted standard info from prmon json
[2026-01-08 09:50:32] 2026-01-08 14:49:59,902 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 09:50:32] 2026-01-08 14:49:59,902 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 09:50:32] 2026-01-08 14:49:59,902 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 09:50:32] 2026-01-08 14:49:59,902 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 09:50:32] 2026-01-08 14:49:59,904 | INFO     | fitting pss+swap vs Time
[2026-01-08 09:50:32] 2026-01-08 14:49:59,904 | INFO     | sum of square deviations: 535786790.0
[2026-01-08 09:50:32] 2026-01-08 14:49:59,905 | INFO     | sum of deviations: 5344166690.000002
[2026-01-08 09:50:32] 2026-01-08 14:49:59,905 | INFO     | mean x: 1767880126.5
[2026-01-08 09:50:32] 2026-01-08 14:49:59,905 | INFO     | mean y: 2317878.033333333
[2026-01-08 09:50:32] 2026-01-08 14:49:59,905 | INFO     | intersect: -17631274924.71996
[2026-01-08 09:50:32] 2026-01-08 14:49:59,905 | INFO     | chi2: 1.222673306914161
[2026-01-08 09:50:32] 2026-01-08 14:49:59,905 | INFO     | sum of square deviations: 471562330.0
[2026-01-08 09:50:32] 2026-01-08 14:49:59,905 | INFO     | sum of deviations: 5180283663.000002
[2026-01-08 09:50:32] 2026-01-08 14:49:59,906 | INFO     | mean x: 1767879974.0
[2026-01-08 09:50:32] 2026-01-08 14:49:59,906 | INFO     | mean y: 2317488.6347826086
[2026-01-08 09:50:32] 2026-01-08 14:49:59,906 | INFO     | intersect: -19418486856.481308
[2026-01-08 09:50:32] 2026-01-08 14:49:59,906 | INFO     | chi2: 1.2243749536975428
[2026-01-08 09:50:32] 2026-01-08 14:49:59,906 | INFO     | current chi2=1.2243749536975428 (change=-0.1391742809595139 %)
[2026-01-08 09:50:32] 2026-01-08 14:49:59,906 | INFO     | right removable region: 114
[2026-01-08 09:50:32] 2026-01-08 14:49:59,906 | INFO     | sum of square deviations: 471562330.0
[2026-01-08 09:50:32] 2026-01-08 14:49:59,906 | INFO     | sum of deviations: -4044844912.999999
[2026-01-08 09:50:32] 2026-01-08 14:49:59,906 | INFO     | mean x: 1767880279.0
[2026-01-08 09:50:32] 2026-01-08 14:49:59,906 | INFO     | mean y: 2339252.652173913
[2026-01-08 09:50:32] 2026-01-08 14:49:59,906 | INFO     | intersect: 15166403679.312737
[2026-01-08 09:50:32] 2026-01-08 14:49:59,906 | INFO     | chi2: 0.009785289627989052
[2026-01-08 09:50:32] 2026-01-08 14:49:59,906 | INFO     | current chi2=0.009785289627989052 (change=99.19968076732732 %)
[2026-01-08 09:50:32] 2026-01-08 14:49:59,906 | INFO     | sum of square deviations: 412686807.5
[2026-01-08 09:50:32] 2026-01-08 14:49:59,907 | INFO     | sum of deviations: -2911533477.0
[2026-01-08 09:50:32] 2026-01-08 14:49:59,907 | INFO     | mean x: 1767880431.5
[2026-01-08 09:50:32] 2026-01-08 14:49:59,907 | INFO     | mean y: 2336332.345454545
[2026-01-08 09:50:32] 2026-01-08 14:49:59,907 | INFO     | intersect: 12474852938.405016
[2026-01-08 09:50:32] 2026-01-08 14:49:59,907 | INFO     | chi2: 0.008161344917328658
[2026-01-08 09:50:32] 2026-01-08 14:49:59,907 | INFO     | current chi2=0.008161344917328658 (change=16.59577562237293 %)
[2026-01-08 09:50:32] 2026-01-08 14:49:59,907 | INFO     | left removable region: 20
[2026-01-08 09:50:32] 2026-01-08 14:49:59,907 | INFO     | sum of square deviations: 257521107.5
[2026-01-08 09:50:32] 2026-01-08 14:49:59,907 | INFO     | sum of deviations: -1355261125.5
[2026-01-08 09:50:32] 2026-01-08 14:49:59,907 | INFO     | mean x: 1767880553.5
[2026-01-08 09:50:32] 2026-01-08 14:49:59,907 | INFO     | mean y: 2332277.776595745
[2026-01-08 09:50:32] 2026-01-08 14:49:59,907 | INFO     | intersect: 9306190171.001806
[2026-01-08 09:50:32] 2026-01-08 14:49:59,907 | INFO     | chi2: 0.006748587924433989
[2026-01-08 09:50:32] 2026-01-08 14:49:59,907 | INFO     | current memory leak: -5.26 B/s (using 94 data points, chi2=0.01)
[2026-01-08 09:50:32] 2026-01-08 14:49:59,908 | INFO     | could have reported an average CPU frequency of 4265 MHz (8 samples)
[2026-01-08 09:50:32] 2026-01-08 14:49:59,908 | INFO     | ..............................
[2026-01-08 09:50:32] 2026-01-08 14:49:59,908 | INFO     | . Timing measurements:
[2026-01-08 09:50:32] 2026-01-08 14:49:59,908 | INFO     | . get job = 0 s
[2026-01-08 09:50:32] 2026-01-08 14:49:59,908 | INFO     | . initial setup = 1 s
[2026-01-08 09:50:32] 2026-01-08 14:49:59,908 | INFO     | . payload setup = 3 s
[2026-01-08 09:50:32] 2026-01-08 14:49:59,908 | INFO     | . stage-in = 0 s
[2026-01-08 09:50:32] 2026-01-08 14:49:59,908 | INFO     | . payload execution = 7294 s
[2026-01-08 09:50:32] 2026-01-08 14:49:59,908 | INFO     | . stage-out = 0 s
[2026-01-08 09:50:32] 2026-01-08 14:49:59,908 | INFO     | . log creation = 0 s
[2026-01-08 09:50:32] 2026-01-08 14:49:59,908 | INFO     | ..............................
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | 
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | job summary report
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | --------------------------------------------------
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | PanDA job id: 6962323874
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | task id: 47898826
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | errors: (none)
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | pilot state: finished 
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | transexitcode: 0
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | exeerrorcode: 0
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | exeerrordiag: 
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | exitcode: 0
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | exitmsg: OK
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | cpuconsumptiontime: 27338 s
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | nevents: 400
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | neventsw: 0
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | pid: 2499718
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | pgrp: 2499718
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | corecount: 4
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | event service: False
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | sizes: {0: 2283976, 3: 2284238, 11: 2284266, 7302: 2311755, 7304: 2320767, 7307: 2320823, 7310: 2321145}
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | --------------------------------------------------
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | 
[2026-01-08 09:50:32] 2026-01-08 14:49:59,959 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-01-08 09:50:32] 2026-01-08 14:49:59,980 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 09:50:32] 2026-01-08 14:49:59,980 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 09:50:32] 2026-01-08 14:49:59,980 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 09:50:32] 2026-01-08 14:49:59,980 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 09:50:32] 2026-01-08 14:49:59,980 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 09:50:32] 2026-01-08 14:49:59,980 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 09:50:32] 2026-01-08 14:49:59,980 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 09:50:32] 2026-01-08 14:49:59,981 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 09:50:32] 2026-01-08 14:49:59,981 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 09:50:32] 2026-01-08 14:49:59,981 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 09:50:32] 2026-01-08 14:49:59,981 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 09:50:32] 2026-01-08 14:49:59,981 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 09:50:32] 2026-01-08 14:49:59,981 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 09:50:32] 2026-01-08 14:49:59,981 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 09:50:32] 2026-01-08 14:49:59,981 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 09:50:32] 2026-01-08 14:49:59,981 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 09:50:32] 2026-01-08 14:49:59,981 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 09:50:32] 2026-01-08 14:49:59,981 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 09:50:32] 2026-01-08 14:49:59,981 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 09:50:32] 2026-01-08 14:49:59,981 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 09:50:32] 2026-01-08 14:49:59,981 | INFO     | job 6962323874 has completed (purged errors)
[2026-01-08 09:50:32] 2026-01-08 14:49:59,981 | INFO     | overall cleanup function is called
[2026-01-08 09:50:32] 2026-01-08 14:50:00,989 | INFO     | --- collectZombieJob: --- 10, [2499718]
[2026-01-08 09:50:32] 2026-01-08 14:50:00,989 | INFO     | zombie collector waiting for pid 2499718
[2026-01-08 09:50:32] 2026-01-08 14:50:00,989 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 09:50:32] 2026-01-08 14:50:00,989 | INFO     | collected zombie processes
[2026-01-08 09:50:32] 2026-01-08 14:50:00,989 | INFO     | will attempt to kill all subprocesses of pid=2499718
[2026-01-08 09:50:32] 2026-01-08 14:50:01,092 | INFO     | process IDs to be killed: [2499718] (in reverse order)
[2026-01-08 09:50:32] 2026-01-08 14:50:01,136 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 09:50:32] 2026-01-08 14:50:01,136 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 09:50:32] 2026-01-08 14:50:01,139 | INFO     | did not find any defunct processes belonging to 2499718
[2026-01-08 09:50:32] 2026-01-08 14:50:01,142 | INFO     | did not find any defunct processes belonging to 2499718
[2026-01-08 09:50:32] 2026-01-08 14:50:01,142 | INFO     | ready for new job
[2026-01-08 09:50:32] 2026-01-08 14:50:01,142 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 09:50:32] 2026-01-08 14:50:01,143 | INFO     | ***************************************
[2026-01-08 09:50:32] 2026-01-08 14:50:01,143 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 09:50:32] 2026-01-08 14:50:01,143 | INFO     | ***************************************
[2026-01-08 09:50:32] 2026-01-08 14:50:01,144 | INFO     | 
[2026-01-08 09:50:32] 2026-01-08 14:50:01,145 | INFO     | architecture information:
[2026-01-08 09:50:32] 2026-01-08 14:50:01,145 | INFO     | executing command: cat /etc/os-release
[2026-01-08 09:50:32] 2026-01-08 14:50:01,157 | INFO     | cat /etc/os-release:
[2026-01-08 09:50:32] NAME="CentOS Linux"
[2026-01-08 09:50:32] VERSION="7 (Core)"
[2026-01-08 09:50:32] ID="centos"
[2026-01-08 09:50:32] ID_LIKE="rhel fedora"
[2026-01-08 09:50:32] VERSION_ID="7"
[2026-01-08 09:50:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 09:50:32] ANSI_COLOR="0;31"
[2026-01-08 09:50:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 09:50:32] HOME_URL="https://www.centos.org/"
[2026-01-08 09:50:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 09:50:32] 
[2026-01-08 09:50:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 09:50:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 09:50:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 09:50:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 09:50:32] 
[2026-01-08 09:50:32] 2026-01-08 14:50:01,158 | INFO     | ***************************************
[2026-01-08 09:50:32] 2026-01-08 14:50:01,660 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-01-08 09:50:32] 2026-01-08 14:50:01,675 | INFO     | sufficient remaining disk space (888587419648 B)
[2026-01-08 09:50:32] 2026-01-08 14:50:01,676 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 09:50:32] 2026-01-08 14:50:01,676 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 09:50:32] 2026-01-08 14:50:01,676 | INFO     | update_server=False
[2026-01-08 09:50:32] 2026-01-08 14:50:01,676 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 09:50:32] 2026-01-08 14:50:01,676 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 09:50:32] 2026-01-08 14:50:01,676 | INFO     | aborting loop
[2026-01-08 09:50:32] 2026-01-08 14:50:01,676 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 09:50:32] 2026-01-08 14:50:01,706 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 09:50:32] 2026-01-08 14:50:01,768 | INFO     | all payload control threads have been joined
[2026-01-08 09:50:32] 2026-01-08 14:50:01,866 | INFO     | all data control threads have been joined
[2026-01-08 09:50:32] 2026-01-08 14:50:02,434 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 09:50:32] 2026-01-08 14:50:02,681 | INFO     | [job] job monitor thread has finished
[2026-01-08 09:50:32] 2026-01-08 14:50:02,681 | INFO     | [job] queue monitor thread has finished
[2026-01-08 09:50:32] 2026-01-08 14:50:02,682 | INFO     | [job] retrieve thread has finished
[2026-01-08 09:50:32] 2026-01-08 14:50:02,764 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 09:50:32] 2026-01-08 14:50:02,774 | INFO     | [payload] control thread has finished
[2026-01-08 09:50:32] 2026-01-08 14:50:02,859 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 09:50:32] 2026-01-08 14:50:02,871 | INFO     | [data] control thread has finished
[2026-01-08 09:50:32] 2026-01-08 14:50:03,309 | INFO     | all job control threads have been joined
[2026-01-08 09:50:32] 2026-01-08 14:50:03,455 | INFO     | [payload] failed_post thread has finished
[2026-01-08 09:50:32] 2026-01-08 14:50:03,568 | INFO     | [data] copytool_in thread has finished
[2026-01-08 09:50:32] 2026-01-08 14:50:03,634 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 09:50:32] 2026-01-08 14:50:03,673 | INFO     | [job] validate thread has finished
[2026-01-08 09:50:32] 2026-01-08 14:50:03,711 | INFO     | [data] copytool_out thread has finished
[2026-01-08 09:50:32] 2026-01-08 14:50:03,947 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 09:50:32] 2026-01-08 14:50:04,103 | INFO     | [payload] validate_post thread has finished
[2026-01-08 09:50:32] 2026-01-08 14:50:04,315 | INFO     | [job] control thread has finished
[2026-01-08 09:50:32] 2026-01-08 14:50:06,442 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 09:50:32] 2026-01-08 14:50:08,142 | INFO     | [monitor] cgroup control has ended
[2026-01-08 09:50:32] 2026-01-08 14:50:09,098 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136368944961344)>', '<ExcThread(monitor, started 136368583841536)>']
[2026-01-08 09:50:32] 2026-01-08 14:50:14,125 | INFO     | all workflow threads have been joined
[2026-01-08 09:50:32] 2026-01-08 14:50:14,134 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 09:50:32] 2026-01-08 14:50:14,134 | INFO     | traces error code: 0
[2026-01-08 09:50:32] 2026-01-08 14:50:14,134 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 09:50:32] 2026-01-08 14:50:32,328 | INFO     | PID=2493060 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 09:50:32] 2026-01-08 14:50:32,328 | INFO     | .. there are 8 such processes running
[2026-01-08 09:50:32] 2026-01-08 14:50:32,329 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 09:50:32] 2026-01-08 14:50:32,329 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 09:50:32] 2026-01-08 14:50:32,329 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 09:50:32] 2026-01-08 14:50:32,329 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 09:50:32] 2026-01-08 14:50:32,329 | INFO     | [monitor] control thread has ended
[2026-01-08 09:50:32] 2026-01-08 14:50:32,405 [wrapper] ==== pilot stdout END ====
[2026-01-08 09:50:32] 2026-01-08 14:50:32,407 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 09:50:32] 2026-01-08 14:50:32,408 [wrapper] pilotpid: 2493060
[2026-01-08 09:50:32] 2026-01-08 14:50:32,410 [wrapper] Pilot exit status: 0
[2026-01-08 09:50:32] 2026-01-08 14:50:32,416 [wrapper] pandaids: 6962323874
[2026-01-08 09:50:32] 2026-01-08 14:50:32,445 [wrapper] cleanup supervisor_pilot 2702302 2493061
[2026-01-08 09:50:32] 2026-01-08 14:50:32,447 [wrapper] Test setup, not cleaning
[2026-01-08 09:50:32] 2026-01-08 14:50:32,448 [wrapper] apfmon messages muted
[2026-01-08 09:50:32] 2026-01-08 14:50:32,450 [wrapper] ==== wrapper stdout END ====
[2026-01-08 09:50:32] 2026-01-08 14:50:32,451 [wrapper] ==== wrapper stderr END ====
[2026-01-08 09:50:32]  *** Error codes and diagnostics ***
[2026-01-08 09:50:32]     "exeErrorCode": 0,
[2026-01-08 09:50:32]     "exeErrorDiag": "",
[2026-01-08 09:50:32]     "pilotErrorCode": 0,
[2026-01-08 09:50:32]     "pilotErrorDiag": "",
[2026-01-08 09:50:32]  *** Listing of results directory ***
[2026-01-08 09:50:32] total 449456
[2026-01-08 09:50:32] -rw-r--r-- 1 boinc boinc    579449 Jan  7 16:00 pilot3.tar.gz
[2026-01-08 09:50:32] -rwx------ 1 boinc boinc     36322 Jan  7 16:09 runpilot2-wrapper.sh
[2026-01-08 09:50:32] -rw-r--r-- 1 boinc boinc      5112 Jan  7 16:16 queuedata.json
[2026-01-08 09:50:32] -rw-r--r-- 1 boinc boinc       100 Jan  8 07:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 09:50:32] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 07:47 run_atlas
[2026-01-08 09:50:32] -rw-r--r-- 1 boinc boinc       105 Jan  8 07:47 job.xml
[2026-01-08 09:50:32] -rw-r--r-- 1 boinc boinc      9845 Jan  8 07:47 init_data.xml
[2026-01-08 09:50:32] -rw-r--r-- 2 boinc boinc 225305989 Jan  8 07:47 EVNT.47898824._000764.pool.root.1
[2026-01-08 09:50:32] -rw-r--r-- 2 boinc boinc     15847 Jan  8 07:47 start_atlas.sh
[2026-01-08 09:50:32] drwxrwx--x 2 boinc boinc      4096 Jan  8 07:47 shared
[2026-01-08 09:50:32] -rw-r--r-- 2 boinc boinc    592406 Jan  8 07:47 input.tar.gz
[2026-01-08 09:50:32] -rw-r--r-- 1 boinc boinc         0 Jan  8 07:47 boinc_lockfile
[2026-01-08 09:50:32] -rw-r--r-- 1 boinc boinc      2519 Jan  8 07:47 pandaJob.out
[2026-01-08 09:50:32] -rw------- 1 boinc boinc    989843 Jan  8 07:47 agis_schedconf.cvmfs.json
[2026-01-08 09:50:32] -rw------- 1 boinc boinc   1516240 Jan  8 07:47 agis_ddmendpoints.agis.ALL.json
[2026-01-08 09:50:32] drwx------ 5 boinc boinc      4096 Jan  8 07:47 pilot3
[2026-01-08 09:50:32] -rw-r--r-- 1 boinc boinc       529 Jan  8 09:49 boinc_task_state.xml
[2026-01-08 09:50:32] -rw------- 1 boinc boinc 228273720 Jan  8 09:49 HITS.47898826._016499.pool.root.1
[2026-01-08 09:50:32] -rw------- 1 boinc boinc      1025 Jan  8 09:49 memory_monitor_summary.json
[2026-01-08 09:50:32] -rw------- 1 boinc boinc    300354 Jan  8 09:49 log.47898826._016499.job.log.tgz.1
[2026-01-08 09:50:32] -rw------- 1 boinc boinc      7744 Jan  8 09:49 heartbeat.json
[2026-01-08 09:50:32] -rw-r--r-- 1 boinc boinc      8192 Jan  8 09:50 boinc_mmap_file
[2026-01-08 09:50:32] -rw-r--r-- 1 boinc boinc        27 Jan  8 09:50 wrapper_checkpoint.txt
[2026-01-08 09:50:32] -rw------- 1 boinc boinc        95 Jan  8 09:50 pilot_heartbeat.json
[2026-01-08 09:50:32] -rw------- 1 boinc boinc       822 Jan  8 09:50 pilotlog.txt
[2026-01-08 09:50:32] -rw------- 1 boinc boinc   1076309 Jan  8 09:50 log.47898826._016499.job.log.1
[2026-01-08 09:50:32] -rw------- 1 boinc boinc       357 Jan  8 09:50 output.list
[2026-01-08 09:50:32] -rw-r--r-- 1 boinc boinc       620 Jan  8 09:50 runtime_log
[2026-01-08 09:50:32] -rw------- 1 boinc boinc   1392640 Jan  8 09:50 result.tar.gz
[2026-01-08 09:50:32] -rw------- 1 boinc boinc       645 Jan  8 09:50 V94KDm0xpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmT8dKDmrszpIo.diag
[2026-01-08 09:50:32] -rw-r--r-- 1 boinc boinc      8897 Jan  8 09:50 runtime_log.err
[2026-01-08 09:50:32] -rw-r--r-- 1 boinc boinc     21398 Jan  8 09:50 stderr.txt
[2026-01-08 09:50:32] HITS file was successfully produced:
[2026-01-08 09:50:32] -rw------- 1 boinc boinc 228273720 Jan  8 09:49 shared/HITS.pool.root.1
[2026-01-08 09:50:32]  *** Contents of shared directory: ***
[2026-01-08 09:50:32] total 444916
[2026-01-08 09:50:32] -rw-r--r-- 2 boinc boinc 225305989 Jan  8 07:47 ATLAS.root_0
[2026-01-08 09:50:32] -rw-r--r-- 2 boinc boinc     15847 Jan  8 07:47 start_atlas.sh
[2026-01-08 09:50:32] -rw-r--r-- 2 boinc boinc    592406 Jan  8 07:47 input.tar.gz
[2026-01-08 09:50:32] -rw------- 1 boinc boinc 228273720 Jan  8 09:49 HITS.pool.root.1
[2026-01-08 09:50:32] -rw------- 1 boinc boinc   1392640 Jan  8 09:50 result.tar.gz
09:50:33 (2489213): run_atlas exited; CPU time 27390.184328
09:50:33 (2489213): called boinc_finish(0)

</stderr_txt>
]]>

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