Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:47 (238661): wrapper (7.7.26015): starting
00:03:47 (238661): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 00:03:47] Arguments: --nthreads 12
[2026-01-08 00:03:47] Threads: 12
[2026-01-08 00:03:47] Checking for CVMFS
[2026-01-08 00:03:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 00:03:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 00:03:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 00:03:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 00:03:49] 2.13.3.0 17216 91390 385592 154891 3 481 20228963 32935936 28537 16776704 0 1318152681 99.637 1277450351 50031 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 00:03:49] CVMFS is ok
[2026-01-08 00:03:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 00:03:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 00:03:49] Further information can be found at the LHC@home message board.
[2026-01-08 00:03:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 00:03:49] Checking for apptainer binary...
[2026-01-08 00:03:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 00:03:49] Running /usr/bin/apptainer --version
[2026-01-08 00:03:49] apptainer version 1.4.5-2.el9
[2026-01-08 00:03:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 00:03:49] c7-9-14.aglt2.org
[2026-01-08 00:03:49] apptainer works
[2026-01-08 00:03:49] Set ATHENA_PROC_NUMBER=12
[2026-01-08 00:03:49] Set ATHENA_CORE_NUMBER=12
[2026-01-08 00:03:50] Starting ATLAS job with PandaID=6962320474
[2026-01-08 00:03:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 02:09:01]  *** The last 200 lines of the pilot log: ***
[2026-01-08 02:09:01] 2026-01-08 07:08:15,028 | INFO     | fitting pss+swap vs Time
[2026-01-08 02:09:01] 2026-01-08 07:08:15,029 | INFO     | sum of square deviations: 535780631.92500097
[2026-01-08 02:09:01] 2026-01-08 07:08:15,029 | INFO     | sum of deviations: 24790626076.924995
[2026-01-08 02:09:01] 2026-01-08 07:08:15,029 | INFO     | mean x: 1767852407.525
[2026-01-08 02:09:01] 2026-01-08 07:08:15,029 | INFO     | mean y: 2646849.191666667
[2026-01-08 02:09:01] 2026-01-08 07:08:15,029 | INFO     | intersect: -81796069608.10411
[2026-01-08 02:09:01] 2026-01-08 07:08:15,029 | INFO     | chi2: 1.637250302938016
[2026-01-08 02:09:01] 2026-01-08 07:08:15,029 | INFO     | sum of square deviations: 471557086.9217385
[2026-01-08 02:09:01] 2026-01-08 07:08:15,030 | INFO     | sum of deviations: 23431298864.460865
[2026-01-08 02:09:01] 2026-01-08 07:08:15,030 | INFO     | mean x: 1767852255.026087
[2026-01-08 02:09:01] 2026-01-08 07:08:15,030 | INFO     | mean y: 2643619.513043478
[2026-01-08 02:09:01] 2026-01-08 07:08:15,030 | INFO     | intersect: -87840537375.03337
[2026-01-08 02:09:01] 2026-01-08 07:08:15,030 | INFO     | chi2: 1.6396186750851092
[2026-01-08 02:09:01] 2026-01-08 07:08:15,030 | INFO     | current chi2=1.6396186750851092 (change=-0.14465547160645298 %)
[2026-01-08 02:09:01] 2026-01-08 07:08:15,030 | INFO     | right removable region: 114
[2026-01-08 02:09:01] 2026-01-08 07:08:15,032 | INFO     | sum of square deviations: 471555256.9217385
[2026-01-08 02:09:01] 2026-01-08 07:08:15,033 | INFO     | sum of deviations: 3141857622.3217397
[2026-01-08 02:09:01] 2026-01-08 07:08:15,033 | INFO     | mean x: 1767852560.026087
[2026-01-08 02:09:01] 2026-01-08 07:08:15,033 | INFO     | mean y: 2697398.2260869564
[2026-01-08 02:09:01] 2026-01-08 07:08:15,033 | INFO     | intersect: -11776072871.703882
[2026-01-08 02:09:01] 2026-01-08 07:08:15,033 | INFO     | chi2: 0.010592060221046697
[2026-01-08 02:09:01] 2026-01-08 07:08:15,033 | INFO     | current chi2=0.010592060221046697 (change=99.3530579776324 %)
[2026-01-08 02:09:01] 2026-01-08 07:08:15,033 | INFO     | sum of square deviations: 412685955.46363544
[2026-01-08 02:09:01] 2026-01-08 07:08:15,033 | INFO     | sum of deviations: 3981353912.254545
[2026-01-08 02:09:01] 2026-01-08 07:08:15,033 | INFO     | mean x: 1767852712.5181818
[2026-01-08 02:09:01] 2026-01-08 07:08:15,033 | INFO     | mean y: 2695213.8727272726
[2026-01-08 02:09:01] 2026-01-08 07:08:15,034 | INFO     | intersect: -17052518854.090096
[2026-01-08 02:09:01] 2026-01-08 07:08:15,034 | INFO     | chi2: 0.0006426091308063508
[2026-01-08 02:09:01] 2026-01-08 07:08:15,034 | INFO     | current chi2=0.0006426091308063508 (change=93.9331053884166 %)
[2026-01-08 02:09:01] 2026-01-08 07:08:15,034 | INFO     | sum of square deviations: 358926197.9619045
[2026-01-08 02:09:01] 2026-01-08 07:08:15,034 | INFO     | sum of deviations: 3239165271.2952385
[2026-01-08 02:09:01] 2026-01-08 07:08:15,034 | INFO     | mean x: 1767852865.0190477
[2026-01-08 02:09:01] 2026-01-08 07:08:15,034 | INFO     | mean y: 2697315.3523809523
[2026-01-08 02:09:01] 2026-01-08 07:08:15,034 | INFO     | intersect: -15951467183.214731
[2026-01-08 02:09:01] 2026-01-08 07:08:15,034 | INFO     | chi2: 0.0004811498602787519
[2026-01-08 02:09:01] 2026-01-08 07:08:15,034 | INFO     | current chi2=0.0004811498602787519 (change=25.125579887885905 %)
[2026-01-08 02:09:01] 2026-01-08 07:08:15,034 | INFO     | sum of square deviations: 310050252.9600007
[2026-01-08 02:09:01] 2026-01-08 07:08:15,035 | INFO     | sum of deviations: 2633828999.5999994
[2026-01-08 02:09:01] 2026-01-08 07:08:15,035 | INFO     | mean x: 1767853017.52
[2026-01-08 02:09:01] 2026-01-08 07:08:15,035 | INFO     | mean y: 2699204.45
[2026-01-08 02:09:01] 2026-01-08 07:08:15,035 | INFO     | intersect: -15014939065.870123
[2026-01-08 02:09:01] 2026-01-08 07:08:15,035 | INFO     | chi2: 0.0003918679280621834
[2026-01-08 02:09:01] 2026-01-08 07:08:15,035 | INFO     | current chi2=0.0003918679280621834 (change=18.555950980603715 %)
[2026-01-08 02:09:01] 2026-01-08 07:08:15,035 | INFO     | left removable region: 40
[2026-01-08 02:09:01] 2026-01-08 07:08:15,035 | INFO     | sum of square deviations: 125626482.44594589
[2026-01-08 02:09:01] 2026-01-08 07:08:15,035 | INFO     | sum of deviations: 827293820.4054054
[2026-01-08 02:09:01] 2026-01-08 07:08:15,035 | INFO     | mean x: 1767853444.5270271
[2026-01-08 02:09:01] 2026-01-08 07:08:15,035 | INFO     | mean y: 2704246.2972972975
[2026-01-08 02:09:01] 2026-01-08 07:08:15,035 | INFO     | intersect: -11639221895.102974
[2026-01-08 02:09:01] 2026-01-08 07:08:15,036 | INFO     | chi2: 0.00021345904108734993
[2026-01-08 02:09:01] 2026-01-08 07:08:15,036 | INFO     | current memory leak: 6.59 B/s (using 74 data points, chi2=0.00)
[2026-01-08 02:09:01] 2026-01-08 07:08:15,036 | INFO     | could have reported an average CPU frequency of 3776 MHz (8 samples)
[2026-01-08 02:09:01] 2026-01-08 07:08:15,036 | INFO     | ..............................
[2026-01-08 02:09:01] 2026-01-08 07:08:15,036 | INFO     | . Timing measurements:
[2026-01-08 02:09:01] 2026-01-08 07:08:15,036 | INFO     | . get job = 0 s
[2026-01-08 02:09:01] 2026-01-08 07:08:15,036 | INFO     | . initial setup = 5 s
[2026-01-08 02:09:01] 2026-01-08 07:08:15,036 | INFO     | . payload setup = 21 s
[2026-01-08 02:09:01] 2026-01-08 07:08:15,036 | INFO     | . stage-in = 0 s
[2026-01-08 02:09:01] 2026-01-08 07:08:15,036 | INFO     | . payload execution = 7314 s
[2026-01-08 02:09:01] 2026-01-08 07:08:15,036 | INFO     | . stage-out = 1 s
[2026-01-08 02:09:01] 2026-01-08 07:08:15,036 | INFO     | . log creation = 0 s
[2026-01-08 02:09:01] 2026-01-08 07:08:15,036 | INFO     | ..............................
[2026-01-08 02:09:01] 2026-01-08 07:08:15,087 | INFO     | 
[2026-01-08 02:09:01] 2026-01-08 07:08:15,087 | INFO     | job summary report
[2026-01-08 02:09:01] 2026-01-08 07:08:15,087 | INFO     | --------------------------------------------------
[2026-01-08 02:09:01] 2026-01-08 07:08:15,088 | INFO     | PanDA job id: 6962320474
[2026-01-08 02:09:01] 2026-01-08 07:08:15,088 | INFO     | task id: 47898826
[2026-01-08 02:09:01] 2026-01-08 07:08:15,088 | INFO     | errors: (none)
[2026-01-08 02:09:01] 2026-01-08 07:08:15,088 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 02:09:01] 2026-01-08 07:08:15,088 | INFO     | pilot state: finished 
[2026-01-08 02:09:01] 2026-01-08 07:08:15,088 | INFO     | transexitcode: 0
[2026-01-08 02:09:01] 2026-01-08 07:08:15,088 | INFO     | exeerrorcode: 0
[2026-01-08 02:09:01] 2026-01-08 07:08:15,088 | INFO     | exeerrordiag: 
[2026-01-08 02:09:01] 2026-01-08 07:08:15,088 | INFO     | exitcode: 0
[2026-01-08 02:09:01] 2026-01-08 07:08:15,088 | INFO     | exitmsg: OK
[2026-01-08 02:09:01] 2026-01-08 07:08:15,088 | INFO     | cpuconsumptiontime: 33246 s
[2026-01-08 02:09:01] 2026-01-08 07:08:15,088 | INFO     | nevents: 400
[2026-01-08 02:09:01] 2026-01-08 07:08:15,088 | INFO     | neventsw: 0
[2026-01-08 02:09:01] 2026-01-08 07:08:15,088 | INFO     | pid: 256386
[2026-01-08 02:09:01] 2026-01-08 07:08:15,088 | INFO     | pgrp: 256386
[2026-01-08 02:09:01] 2026-01-08 07:08:15,088 | INFO     | corecount: 12
[2026-01-08 02:09:01] 2026-01-08 07:08:15,088 | INFO     | event service: False
[2026-01-08 02:09:01] 2026-01-08 07:08:15,088 | INFO     | sizes: {0: 2283969, 1: 2283969, 11: 2283997, 22: 2284025, 24: 2284315, 33: 2284343, 7339: 2312061, 7340: 2312060, 7341: 2321114, 7343: 2321170, 7358: 2321364}
[2026-01-08 02:09:01] 2026-01-08 07:08:15,088 | INFO     | --------------------------------------------------
[2026-01-08 02:09:01] 2026-01-08 07:08:15,088 | INFO     | 
[2026-01-08 02:09:01] 2026-01-08 07:08:15,088 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-08 02:09:01] 2026-01-08 07:08:15,140 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 02:09:01] 2026-01-08 07:08:15,140 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 02:09:01] 2026-01-08 07:08:15,140 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 02:09:01] 2026-01-08 07:08:15,140 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 02:09:01] 2026-01-08 07:08:15,140 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 02:09:01] 2026-01-08 07:08:15,140 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 02:09:01] 2026-01-08 07:08:15,140 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 02:09:01] 2026-01-08 07:08:15,140 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 02:09:01] 2026-01-08 07:08:15,140 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 02:09:01] 2026-01-08 07:08:15,140 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 02:09:01] 2026-01-08 07:08:15,140 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 02:09:01] 2026-01-08 07:08:15,140 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 02:09:01] 2026-01-08 07:08:15,140 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 02:09:01] 2026-01-08 07:08:15,140 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 02:09:01] 2026-01-08 07:08:15,140 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 02:09:01] 2026-01-08 07:08:15,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 02:09:01] 2026-01-08 07:08:15,141 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 02:09:01] 2026-01-08 07:08:15,141 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 02:09:01] 2026-01-08 07:08:15,141 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 02:09:01] 2026-01-08 07:08:15,141 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 02:09:01] 2026-01-08 07:08:15,141 | INFO     | job 6962320474 has completed (purged errors)
[2026-01-08 02:09:01] 2026-01-08 07:08:15,141 | INFO     | overall cleanup function is called
[2026-01-08 02:09:01] 2026-01-08 07:08:16,157 | INFO     | --- collectZombieJob: --- 10, [256386]
[2026-01-08 02:09:01] 2026-01-08 07:08:16,177 | INFO     | zombie collector waiting for pid 256386
[2026-01-08 02:09:01] 2026-01-08 07:08:16,181 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 02:09:01] 2026-01-08 07:08:16,181 | INFO     | collected zombie processes
[2026-01-08 02:09:01] 2026-01-08 07:08:16,183 | INFO     | will attempt to kill all subprocesses of pid=256386
[2026-01-08 02:09:01] 2026-01-08 07:08:16,383 | INFO     | PID=244949 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 02:09:01] 2026-01-08 07:08:16,383 | INFO     | .. there are 21 such processes running
[2026-01-08 02:09:01] 2026-01-08 07:08:16,677 | INFO     | process IDs to be killed: [256386] (in reverse order)
[2026-01-08 02:09:01] 2026-01-08 07:08:16,811 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 02:09:01] 2026-01-08 07:08:16,811 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 02:09:01] 2026-01-08 07:08:16,831 | INFO     | did not find any defunct processes belonging to 256386
[2026-01-08 02:09:01] 2026-01-08 07:08:16,849 | INFO     | did not find any defunct processes belonging to 256386
[2026-01-08 02:09:01] 2026-01-08 07:08:16,850 | INFO     | ready for new job
[2026-01-08 02:09:01] 2026-01-08 07:08:16,850 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 02:09:01] 2026-01-08 07:08:16,852 | INFO     | ***************************************
[2026-01-08 02:09:01] 2026-01-08 07:08:16,852 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 02:09:01] 2026-01-08 07:08:16,852 | INFO     | ***************************************
[2026-01-08 02:09:01] 2026-01-08 07:08:16,852 | INFO     | 
[2026-01-08 02:09:01] 2026-01-08 07:08:16,862 | INFO     | architecture information:
[2026-01-08 02:09:01] 2026-01-08 07:08:16,866 | INFO     | executing command: cat /etc/os-release
[2026-01-08 02:09:01] 2026-01-08 07:08:16,882 | INFO     | cat /etc/os-release:
[2026-01-08 02:09:01] NAME="CentOS Linux"
[2026-01-08 02:09:01] VERSION="7 (Core)"
[2026-01-08 02:09:01] ID="centos"
[2026-01-08 02:09:01] ID_LIKE="rhel fedora"
[2026-01-08 02:09:01] VERSION_ID="7"
[2026-01-08 02:09:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 02:09:01] ANSI_COLOR="0;31"
[2026-01-08 02:09:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 02:09:01] HOME_URL="https://www.centos.org/"
[2026-01-08 02:09:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 02:09:01] 
[2026-01-08 02:09:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 02:09:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 02:09:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 02:09:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 02:09:01] 
[2026-01-08 02:09:01] 2026-01-08 07:08:16,882 | INFO     | ***************************************
[2026-01-08 02:09:01] 2026-01-08 07:08:17,385 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-08 02:09:01] 2026-01-08 07:08:17,401 | INFO     | sufficient remaining disk space (75868667904 B)
[2026-01-08 02:09:01] 2026-01-08 07:08:17,401 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 02:09:01] 2026-01-08 07:08:17,402 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 02:09:01] 2026-01-08 07:08:17,402 | INFO     | update_server=False
[2026-01-08 02:09:01] 2026-01-08 07:08:17,402 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 02:09:01] 2026-01-08 07:08:17,435 | INFO     | all payload control threads have been joined
[2026-01-08 02:09:01] 2026-01-08 07:08:17,669 | INFO     | all data control threads have been joined
[2026-01-08 02:09:01] 2026-01-08 07:08:18,363 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 02:09:01] 2026-01-08 07:08:18,364 | INFO     | aborting loop
[2026-01-08 02:09:01] 2026-01-08 07:08:18,406 | INFO     | [job] retrieve thread has finished
[2026-01-08 02:09:01] 2026-01-08 07:08:18,436 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 02:09:01] 2026-01-08 07:08:18,450 | INFO     | [payload] control thread has finished
[2026-01-08 02:09:01] 2026-01-08 07:08:18,525 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 02:09:01] 2026-01-08 07:08:18,549 | INFO     | [data] copytool_in thread has finished
[2026-01-08 02:09:01] 2026-01-08 07:08:18,650 | INFO     | [payload] failed_post thread has finished
[2026-01-08 02:09:01] 2026-01-08 07:08:18,670 | INFO     | [payload] validate_post thread has finished
[2026-01-08 02:09:01] 2026-01-08 07:08:18,674 | INFO     | [data] control thread has finished
[2026-01-08 02:09:01] 2026-01-08 07:08:19,034 | INFO     | all job control threads have been joined
[2026-01-08 02:09:01] 2026-01-08 07:08:19,147 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 02:09:01] 2026-01-08 07:08:19,288 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 02:09:01] 2026-01-08 07:08:19,290 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 02:09:01] 2026-01-08 07:08:19,329 | INFO     | [job] validate thread has finished
[2026-01-08 02:09:01] 2026-01-08 07:08:19,369 | INFO     | [job] job monitor thread has finished
[2026-01-08 02:09:01] 2026-01-08 07:08:20,039 | INFO     | [job] control thread has finished
[2026-01-08 02:09:01] 2026-01-08 07:08:20,106 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 02:09:01] 2026-01-08 07:08:20,532 | INFO     | [data] copytool_out thread has finished
[2026-01-08 02:09:01] 2026-01-08 07:08:21,112 | INFO     | [job] queue monitor thread has finished
[2026-01-08 02:09:01] 2026-01-08 07:08:23,154 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 02:09:01] 2026-01-08 07:08:28,456 | INFO     | job.realtimelogging is not enabled
[2026-01-08 02:09:01] 2026-01-08 07:08:29,462 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 02:09:01] 2026-01-08 07:08:48,908 | INFO     | PID=244949 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 02:09:01] 2026-01-08 07:08:48,908 | INFO     | .. there are 21 such processes running
[2026-01-08 02:09:01] 2026-01-08 07:08:48,908 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 02:09:01] 2026-01-08 07:08:48,908 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 02:09:01] 2026-01-08 07:08:48,908 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 02:09:01] 2026-01-08 07:08:55,162 | INFO     | [monitor] cgroup control has ended
[2026-01-08 02:09:01] 2026-01-08 07:08:55,274 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140579361109824)>', '<ExcThread(monitor, started 140578566170368)>']
[2026-01-08 02:09:01] 2026-01-08 07:08:55,950 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 02:09:01] 2026-01-08 07:08:55,950 | INFO     | [monitor] control thread has ended
[2026-01-08 02:09:01] 2026-01-08 07:09:00,300 | INFO     | all workflow threads have been joined
[2026-01-08 02:09:01] 2026-01-08 07:09:00,300 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 02:09:01] 2026-01-08 07:09:00,301 | INFO     | traces error code: 0
[2026-01-08 02:09:01] 2026-01-08 07:09:00,301 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 02:09:01] 2026-01-08 07:09:00,629 [wrapper] ==== pilot stdout END ====
[2026-01-08 02:09:01] 2026-01-08 07:09:00,648 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 02:09:01] 2026-01-08 07:09:00,662 [wrapper] pilotpid: 244949
[2026-01-08 02:09:01] 2026-01-08 07:09:00,683 [wrapper] Pilot exit status: 0
[2026-01-08 02:09:01] 2026-01-08 07:09:00,798 [wrapper] pandaids: 6962320474
[2026-01-08 02:09:01] 2026-01-08 07:09:00,929 [wrapper] cleanup supervisor_pilot 1011055 244950
[2026-01-08 02:09:01] 2026-01-08 07:09:00,950 [wrapper] Test setup, not cleaning
[2026-01-08 02:09:01] 2026-01-08 07:09:00,958 [wrapper] apfmon messages muted
[2026-01-08 02:09:01] 2026-01-08 07:09:00,965 [wrapper] ==== wrapper stdout END ====
[2026-01-08 02:09:01] 2026-01-08 07:09:00,976 [wrapper] ==== wrapper stderr END ====
[2026-01-08 02:09:01]  *** Error codes and diagnostics ***
[2026-01-08 02:09:01]     "exeErrorCode": 0,
[2026-01-08 02:09:01]     "exeErrorDiag": "",
[2026-01-08 02:09:01]     "pilotErrorCode": 0,
[2026-01-08 02:09:01]     "pilotErrorDiag": "",
[2026-01-08 02:09:01]  *** Listing of results directory ***
[2026-01-08 02:09:01] total 440992
[2026-01-08 02:09:01] -rwx------. 1 boincer umatlas     36322 Jan  7 16:00 runpilot2-wrapper.sh
[2026-01-08 02:09:01] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 16:00 pilot3.tar.gz
[2026-01-08 02:09:01] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 16:05 queuedata.json
[2026-01-08 02:09:01] -rw-r--r--. 1 boincer umatlas       100 Jan  8 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 02:09:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 00:03 run_atlas
[2026-01-08 02:09:01] -rw-r--r--. 1 boincer umatlas       105 Jan  8 00:03 job.xml
[2026-01-08 02:09:01] -rw-r--r--. 2 boincer umatlas 223311927 Jan  8 00:03 EVNT.47898824._000618.pool.root.1
[2026-01-08 02:09:01] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 00:03 start_atlas.sh
[2026-01-08 02:09:01] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 00:03 shared
[2026-01-08 02:09:01] -rw-r--r--. 2 boincer umatlas    592398 Jan  8 00:03 input.tar.gz
[2026-01-08 02:09:01] -rw-r--r--. 1 boincer umatlas         0 Jan  8 00:03 boinc_lockfile
[2026-01-08 02:09:01] -rw-r--r--. 1 boincer umatlas      2519 Jan  8 00:03 pandaJob.out
[2026-01-08 02:09:01] -rw-------. 1 boincer umatlas        57 Jan  8 00:03 setup.sh.local
[2026-01-08 02:09:01] -rw-------. 1 boincer umatlas    989835 Jan  8 00:04 agis_schedconf.cvmfs.json
[2026-01-08 02:09:01] -rw-------. 1 boincer umatlas   1516240 Jan  8 00:04 agis_ddmendpoints.agis.ALL.json
[2026-01-08 02:09:01] drwx------. 5 boincer umatlas      4096 Jan  8 00:04 pilot3
[2026-01-08 02:09:01] -rw-r--r--. 1 boincer umatlas      7168 Jan  8 02:00 init_data.xml
[2026-01-08 02:09:01] -rw-------. 1 boincer umatlas 221494265 Jan  8 02:07 HITS.47898826._014287.pool.root.1
[2026-01-08 02:09:01] -rw-r--r--. 1 boincer umatlas       530 Jan  8 02:07 boinc_task_state.xml
[2026-01-08 02:09:01] -rw-------. 1 boincer umatlas      1033 Jan  8 02:07 memory_monitor_summary.json
[2026-01-08 02:09:01] -rw-------. 1 boincer umatlas    434758 Jan  8 02:07 log.47898826._014287.job.log.tgz.1
[2026-01-08 02:09:01] -rw-------. 1 boincer umatlas        95 Jan  8 02:08 pilot_heartbeat.json
[2026-01-08 02:09:01] -rw-------. 1 boincer umatlas      7772 Jan  8 02:08 heartbeat.json
[2026-01-08 02:09:01] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 02:08 boinc_mmap_file
[2026-01-08 02:09:01] -rw-r--r--. 1 boincer umatlas        27 Jan  8 02:08 wrapper_checkpoint.txt
[2026-01-08 02:09:01] -rw-------. 1 boincer umatlas      4895 Jan  8 02:09 pilotlog.txt
[2026-01-08 02:09:01] -rw-------. 1 boincer umatlas    994088 Jan  8 02:09 log.47898826._014287.job.log.1
[2026-01-08 02:09:01] -rw-------. 1 boincer umatlas       357 Jan  8 02:09 output.list
[2026-01-08 02:09:01] -rw-r--r--. 1 boincer umatlas       620 Jan  8 02:09 runtime_log
[2026-01-08 02:09:01] -rw-------. 1 boincer umatlas   1443840 Jan  8 02:09 result.tar.gz
[2026-01-08 02:09:01] -rw-------. 1 boincer umatlas       651 Jan  8 02:09 WajMDmtopx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmuqdKDmGkLzon.diag
[2026-01-08 02:09:01] -rw-r--r--. 1 boincer umatlas      9339 Jan  8 02:09 runtime_log.err
[2026-01-08 02:09:01] -rw-r--r--. 1 boincer umatlas     21167 Jan  8 02:09 stderr.txt
[2026-01-08 02:09:01] HITS file was successfully produced:
[2026-01-08 02:09:01] -rw-------. 1 boincer umatlas 221494265 Jan  8 02:07 shared/HITS.pool.root.1
[2026-01-08 02:09:01]  *** Contents of shared directory: ***
[2026-01-08 02:09:01] total 436396
[2026-01-08 02:09:01] -rw-r--r--. 2 boincer umatlas 223311927 Jan  8 00:03 ATLAS.root_0
[2026-01-08 02:09:01] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 00:03 start_atlas.sh
[2026-01-08 02:09:01] -rw-r--r--. 2 boincer umatlas    592398 Jan  8 00:03 input.tar.gz
[2026-01-08 02:09:01] -rw-------. 1 boincer umatlas 221494265 Jan  8 02:07 HITS.pool.root.1
[2026-01-08 02:09:01] -rw-------. 1 boincer umatlas   1443840 Jan  8 02:09 result.tar.gz
02:09:02 (238661): run_atlas exited; CPU time 33413.302778
02:09:02 (238661): called boinc_finish(0)

</stderr_txt>
]]>

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