Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:14 (1015953): wrapper (7.7.26015): starting
00:01:14 (1015953): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 00:01:14] Arguments: --nthreads 12
[2026-01-08 00:01:14] Threads: 12
[2026-01-08 00:01:14] Checking for CVMFS
[2026-01-08 00:01:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 00:01:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 00:01:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 00:01:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 00:01:15] 2.13.3.0 5308 69908 422848 154891 3 503 24602868 32935937 13053 16776704 0 144622894 99.369 267533329 41134 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 00:01:15] CVMFS is ok
[2026-01-08 00:01:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 00:01:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 00:01:15] Further information can be found at the LHC@home message board.
[2026-01-08 00:01:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 00:01:15] Checking for apptainer binary...
[2026-01-08 00:01:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 00:01:15] Running /usr/bin/apptainer --version
[2026-01-08 00:01:15] apptainer version 1.4.5-2.el9
[2026-01-08 00:01:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 00:01:15] c6-1-24-1.aglt2.org
[2026-01-08 00:01:15] apptainer works
[2026-01-08 00:01:15] Set ATHENA_PROC_NUMBER=12
[2026-01-08 00:01:15] Set ATHENA_CORE_NUMBER=12
[2026-01-08 00:01:15] Starting ATLAS job with PandaID=6962320003
[2026-01-08 00:01:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 07:46:45]  *** The last 200 lines of the pilot log: ***
[2026-01-08 07:46:45] 2026-01-08 12:46:04,236 | INFO     | time since job start (27859s) is within the limit (174528.0s)
[2026-01-08 07:46:45] 2026-01-08 12:46:04,401 | INFO     | monitor loop #1723: job 0:6962320003 is in state 'finished'
[2026-01-08 07:46:45] 2026-01-08 12:46:04,401 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 07:46:45] 2026-01-08 12:46:06,243 | INFO     | time since job start (27861s) is within the limit (174528.0s)
[2026-01-08 07:46:45] 2026-01-08 12:46:06,906 | INFO     | monitor loop #1724: job 0:6962320003 is in state 'finished'
[2026-01-08 07:46:45] 2026-01-08 12:46:06,906 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 07:46:45] 2026-01-08 12:46:08,250 | INFO     | time since job start (27863s) is within the limit (174528.0s)
[2026-01-08 07:46:45] 2026-01-08 12:46:09,337 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-08 07:46:45] 2026-01-08 12:46:09,341 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2981.7864285714286
[2026-01-08 07:46:45] 2026-01-08 12:46:09,389 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6962320003/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 07:46:45] 2026-01-08 12:46:09,417 | INFO     | monitor loop #1725: job 0:6962320003 is in state 'finished'
[2026-01-08 07:46:45] 2026-01-08 12:46:09,417 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 07:46:45] 2026-01-08 12:46:09,417 | INFO     | extracted standard info from prmon json
[2026-01-08 07:46:45] 2026-01-08 12:46:09,418 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 07:46:45] 2026-01-08 12:46:09,418 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 07:46:45] 2026-01-08 12:46:09,423 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 07:46:45] 2026-01-08 12:46:09,423 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 07:46:45] 2026-01-08 12:46:09,466 | INFO     | fitting pss+swap vs Time
[2026-01-08 07:46:45] 2026-01-08 12:46:09,501 | INFO     | sum of square deviations: 29400250365.18433
[2026-01-08 07:46:45] 2026-01-08 12:46:09,506 | INFO     | sum of deviations: 181467511510.55252
[2026-01-08 07:46:45] 2026-01-08 12:46:09,506 | INFO     | mean x: 1767862452.2236843
[2026-01-08 07:46:45] 2026-01-08 12:46:09,507 | INFO     | mean y: 2658493.3377192984
[2026-01-08 07:46:45] 2026-01-08 12:46:09,507 | INFO     | intersect: -10909139736.716696
[2026-01-08 07:46:45] 2026-01-08 12:46:09,507 | INFO     | chi2: 3.345884043054391
[2026-01-08 07:46:45] 2026-01-08 12:46:09,508 | INFO     | sum of square deviations: 28443756332.536602
[2026-01-08 07:46:45] 2026-01-08 12:46:09,513 | INFO     | sum of deviations: 209581315947.34146
[2026-01-08 07:46:45] 2026-01-08 12:46:09,513 | INFO     | mean x: 1767862299.7317073
[2026-01-08 07:46:45] 2026-01-08 12:46:09,513 | INFO     | mean y: 2662931.374722838
[2026-01-08 07:46:45] 2026-01-08 12:46:09,513 | INFO     | intersect: -13023426269.35577
[2026-01-08 07:46:45] 2026-01-08 12:46:09,514 | INFO     | chi2: 2.64506329362043
[2026-01-08 07:46:45] 2026-01-08 12:46:09,514 | INFO     | current chi2=2.64506329362043 (change=20.945757247289286 %)
[2026-01-08 07:46:45] 2026-01-08 12:46:09,514 | INFO     | right removable region: 450
[2026-01-08 07:46:45] 2026-01-08 12:46:09,515 | INFO     | sum of square deviations: 28443555032.536594
[2026-01-08 07:46:45] 2026-01-08 12:46:09,519 | INFO     | sum of deviations: 72267394232.14633
[2026-01-08 07:46:45] 2026-01-08 12:46:09,519 | INFO     | mean x: 1767862604.7317073
[2026-01-08 07:46:45] 2026-01-08 12:46:09,519 | INFO     | mean y: 2675847.4722838136
[2026-01-08 07:46:45] 2026-01-08 12:46:09,520 | INFO     | intersect: -4488985748.916495
[2026-01-08 07:46:45] 2026-01-08 12:46:09,521 | INFO     | chi2: 1.1351886354723406
[2026-01-08 07:46:45] 2026-01-08 12:46:09,521 | INFO     | current chi2=1.1351886354723406 (change=66.07208675301102 %)
[2026-01-08 07:46:45] 2026-01-08 12:46:09,521 | INFO     | sum of square deviations: 27507864348.807243
[2026-01-08 07:46:45] 2026-01-08 12:46:09,526 | INFO     | sum of deviations: 48352298112.65903
[2026-01-08 07:46:45] 2026-01-08 12:46:09,526 | INFO     | mean x: 1767862757.2376683
[2026-01-08 07:46:45] 2026-01-08 12:46:09,526 | INFO     | mean y: 2679743.7107623317
[2026-01-08 07:46:45] 2026-01-08 12:46:09,526 | INFO     | intersect: -3104803482.76987
[2026-01-08 07:46:45] 2026-01-08 12:46:09,527 | INFO     | chi2: 1.0612822438963485
[2026-01-08 07:46:45] 2026-01-08 12:46:09,527 | INFO     | current chi2=1.0612822438963485 (change=6.51049431491537 %)
[2026-01-08 07:46:45] 2026-01-08 12:46:09,527 | INFO     | left removable region: 20
[2026-01-08 07:46:45] 2026-01-08 12:46:09,527 | INFO     | sum of square deviations: 24652224614.874504
[2026-01-08 07:46:45] 2026-01-08 12:46:09,532 | INFO     | sum of deviations: 15927984797.930223
[2026-01-08 07:46:45] 2026-01-08 12:46:09,532 | INFO     | mean x: 1767862879.2511628
[2026-01-08 07:46:45] 2026-01-08 12:46:09,532 | INFO     | mean y: 2694949.1395348837
[2026-01-08 07:46:45] 2026-01-08 12:46:09,532 | INFO     | intersect: -1139534342.7576184
[2026-01-08 07:46:45] 2026-01-08 12:46:09,533 | INFO     | chi2: 0.02570617522101752
[2026-01-08 07:46:45] 2026-01-08 12:46:09,533 | INFO     | current memory leak: 0.65 B/s (using 430 data points, chi2=0.03)
[2026-01-08 07:46:45] 2026-01-08 12:46:09,534 | INFO     | could have reported an average CPU frequency of 2908 MHz (19 samples)
[2026-01-08 07:46:45] 2026-01-08 12:46:09,534 | INFO     | ..............................
[2026-01-08 07:46:45] 2026-01-08 12:46:09,534 | INFO     | . Timing measurements:
[2026-01-08 07:46:45] 2026-01-08 12:46:09,534 | INFO     | . get job = 0 s
[2026-01-08 07:46:45] 2026-01-08 12:46:09,534 | INFO     | . initial setup = 3 s
[2026-01-08 07:46:45] 2026-01-08 12:46:09,534 | INFO     | . payload setup = 18 s
[2026-01-08 07:46:45] 2026-01-08 12:46:09,534 | INFO     | . stage-in = 0 s
[2026-01-08 07:46:45] 2026-01-08 12:46:09,534 | INFO     | . payload execution = 27784 s
[2026-01-08 07:46:45] 2026-01-08 12:46:09,534 | INFO     | . stage-out = 4 s
[2026-01-08 07:46:45] 2026-01-08 12:46:09,534 | INFO     | . log creation = 1 s
[2026-01-08 07:46:45] 2026-01-08 12:46:09,535 | INFO     | ..............................
[2026-01-08 07:46:45] 2026-01-08 12:46:09,645 | INFO     | 
[2026-01-08 07:46:45] 2026-01-08 12:46:09,645 | INFO     | job summary report
[2026-01-08 07:46:45] 2026-01-08 12:46:09,645 | INFO     | --------------------------------------------------
[2026-01-08 07:46:45] 2026-01-08 12:46:09,645 | INFO     | PanDA job id: 6962320003
[2026-01-08 07:46:45] 2026-01-08 12:46:09,645 | INFO     | task id: 47898826
[2026-01-08 07:46:45] 2026-01-08 12:46:09,645 | INFO     | errors: (none)
[2026-01-08 07:46:45] 2026-01-08 12:46:09,645 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 07:46:45] 2026-01-08 12:46:09,645 | INFO     | pilot state: finished 
[2026-01-08 07:46:45] 2026-01-08 12:46:09,645 | INFO     | transexitcode: 0
[2026-01-08 07:46:45] 2026-01-08 12:46:09,645 | INFO     | exeerrorcode: 0
[2026-01-08 07:46:45] 2026-01-08 12:46:09,645 | INFO     | exeerrordiag: 
[2026-01-08 07:46:45] 2026-01-08 12:46:09,645 | INFO     | exitcode: 0
[2026-01-08 07:46:45] 2026-01-08 12:46:09,646 | INFO     | exitmsg: OK
[2026-01-08 07:46:45] 2026-01-08 12:46:09,646 | INFO     | cpuconsumptiontime: 57788 s
[2026-01-08 07:46:45] 2026-01-08 12:46:09,646 | INFO     | nevents: 400
[2026-01-08 07:46:45] 2026-01-08 12:46:09,646 | INFO     | neventsw: 0
[2026-01-08 07:46:45] 2026-01-08 12:46:09,646 | INFO     | pid: 1027290
[2026-01-08 07:46:45] 2026-01-08 12:46:09,646 | INFO     | pgrp: 1027290
[2026-01-08 07:46:45] 2026-01-08 12:46:09,646 | INFO     | corecount: 12
[2026-01-08 07:46:45] 2026-01-08 12:46:09,646 | INFO     | event service: False
[2026-01-08 07:46:45] 2026-01-08 12:46:09,646 | INFO     | sizes: {0: 2283969, 1: 2283969, 11: 2283997, 16: 2284287, 22: 2284315, 27808: 2321178, 27814: 2330176, 27815: 2330232, 27828: 2330426}
[2026-01-08 07:46:45] 2026-01-08 12:46:09,646 | INFO     | --------------------------------------------------
[2026-01-08 07:46:45] 2026-01-08 12:46:09,646 | INFO     | 
[2026-01-08 07:46:45] 2026-01-08 12:46:09,646 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-08 07:46:45] 2026-01-08 12:46:09,687 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 07:46:45] 2026-01-08 12:46:09,687 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 07:46:45] 2026-01-08 12:46:09,687 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 07:46:45] 2026-01-08 12:46:09,687 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 07:46:45] 2026-01-08 12:46:09,687 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 07:46:45] 2026-01-08 12:46:09,687 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 07:46:45] 2026-01-08 12:46:09,687 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 07:46:45] 2026-01-08 12:46:09,687 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 07:46:45] 2026-01-08 12:46:09,688 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 07:46:45] 2026-01-08 12:46:09,688 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 07:46:45] 2026-01-08 12:46:09,688 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 07:46:45] 2026-01-08 12:46:09,688 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 07:46:45] 2026-01-08 12:46:09,688 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 07:46:45] 2026-01-08 12:46:09,688 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 07:46:45] 2026-01-08 12:46:09,688 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 07:46:45] 2026-01-08 12:46:09,688 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 07:46:45] 2026-01-08 12:46:09,688 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 07:46:45] 2026-01-08 12:46:09,688 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 07:46:45] 2026-01-08 12:46:09,688 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 07:46:45] 2026-01-08 12:46:09,688 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 07:46:45] 2026-01-08 12:46:09,688 | INFO     | job 6962320003 has completed (purged errors)
[2026-01-08 07:46:45] 2026-01-08 12:46:09,689 | INFO     | overall cleanup function is called
[2026-01-08 07:46:45] 2026-01-08 12:46:10,699 | INFO     | --- collectZombieJob: --- 10, [1027290]
[2026-01-08 07:46:45] 2026-01-08 12:46:10,699 | INFO     | zombie collector waiting for pid 1027290
[2026-01-08 07:46:45] 2026-01-08 12:46:10,699 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 07:46:45] 2026-01-08 12:46:10,699 | INFO     | collected zombie processes
[2026-01-08 07:46:45] 2026-01-08 12:46:10,699 | INFO     | will attempt to kill all subprocesses of pid=1027290
[2026-01-08 07:46:45] 2026-01-08 12:46:11,316 | INFO     | process IDs to be killed: [1027290] (in reverse order)
[2026-01-08 07:46:45] 2026-01-08 12:46:11,470 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 07:46:45] 2026-01-08 12:46:11,470 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 07:46:45] 2026-01-08 12:46:11,480 | INFO     | did not find any defunct processes belonging to 1027290
[2026-01-08 07:46:45] 2026-01-08 12:46:11,490 | INFO     | did not find any defunct processes belonging to 1027290
[2026-01-08 07:46:45] 2026-01-08 12:46:11,490 | INFO     | ready for new job
[2026-01-08 07:46:45] 2026-01-08 12:46:11,490 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 07:46:45] 2026-01-08 12:46:11,494 | INFO     | ***************************************
[2026-01-08 07:46:45] 2026-01-08 12:46:11,494 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 07:46:45] 2026-01-08 12:46:11,494 | INFO     | ***************************************
[2026-01-08 07:46:45] 2026-01-08 12:46:11,494 | INFO     | 
[2026-01-08 07:46:45] 2026-01-08 12:46:11,498 | INFO     | architecture information:
[2026-01-08 07:46:45] 2026-01-08 12:46:11,498 | INFO     | executing command: cat /etc/os-release
[2026-01-08 07:46:45] 2026-01-08 12:46:11,520 | INFO     | cat /etc/os-release:
[2026-01-08 07:46:45] NAME="CentOS Linux"
[2026-01-08 07:46:45] VERSION="7 (Core)"
[2026-01-08 07:46:45] ID="centos"
[2026-01-08 07:46:45] ID_LIKE="rhel fedora"
[2026-01-08 07:46:45] VERSION_ID="7"
[2026-01-08 07:46:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 07:46:45] ANSI_COLOR="0;31"
[2026-01-08 07:46:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 07:46:45] HOME_URL="https://www.centos.org/"
[2026-01-08 07:46:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 07:46:45] 
[2026-01-08 07:46:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 07:46:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 07:46:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 07:46:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 07:46:45] 
[2026-01-08 07:46:45] 2026-01-08 12:46:11,520 | INFO     | ***************************************
[2026-01-08 07:46:45] 2026-01-08 12:46:12,024 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-08 07:46:45] 2026-01-08 12:46:12,048 | INFO     | sufficient remaining disk space (75556192256 B)
[2026-01-08 07:46:45] 2026-01-08 12:46:12,048 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 07:46:45] 2026-01-08 12:46:12,048 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 07:46:45] 2026-01-08 12:46:12,048 | INFO     | update_server=False
[2026-01-08 07:46:45] 2026-01-08 12:46:12,049 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 07:46:45] 2026-01-08 12:46:12,049 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 07:46:45] 2026-01-08 12:46:12,049 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 07:46:45] 2026-01-08 12:46:12,394 | INFO     | all payload control threads have been joined
[2026-01-08 07:46:45] 2026-01-08 12:46:12,806 | INFO     | all data control threads have been joined
[2026-01-08 07:46:45] 2026-01-08 12:46:12,928 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 07:46:45] 2026-01-08 12:46:12,928 | INFO     | aborting loop
[2026-01-08 07:46:45] 2026-01-08 12:46:13,054 | INFO     | [job] retrieve thread has finished
[2026-01-08 07:46:45] 2026-01-08 12:46:13,086 | INFO     | all job control threads have been joined
[2026-01-08 07:46:45] 2026-01-08 12:46:13,262 | INFO     | [data] copytool_in thread has finished
[2026-01-08 07:46:45] 2026-01-08 12:46:13,265 | INFO     | [job] validate thread has finished
[2026-01-08 07:46:45] 2026-01-08 12:46:13,271 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 07:46:45] 2026-01-08 12:46:13,275 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 07:46:45] 2026-01-08 12:46:13,362 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 07:46:45] 2026-01-08 12:46:13,400 | INFO     | [payload] control thread has finished
[2026-01-08 07:46:45] 2026-01-08 12:46:13,559 | INFO     | [payload] failed_post thread has finished
[2026-01-08 07:46:45] 2026-01-08 12:46:13,812 | INFO     | [data] control thread has finished
[2026-01-08 07:46:45] 2026-01-08 12:46:13,934 | INFO     | [job] job monitor thread has finished
[2026-01-08 07:46:45] 2026-01-08 12:46:13,977 | INFO     | [payload] validate_post thread has finished
[2026-01-08 07:46:45] 2026-01-08 12:46:14,076 | INFO     | [data] copytool_out thread has finished
[2026-01-08 07:46:45] 2026-01-08 12:46:14,092 | INFO     | [job] control thread has finished
[2026-01-08 07:46:45] 2026-01-08 12:46:14,180 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 07:46:45] 2026-01-08 12:46:14,658 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 07:46:45] 2026-01-08 12:46:15,664 | INFO     | [job] queue monitor thread has finished
[2026-01-08 07:46:45] 2026-01-08 12:46:16,061 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 07:46:45] 2026-01-08 12:46:34,746 | INFO     | [monitor] cgroup control has ended
[2026-01-08 07:46:45] 2026-01-08 12:46:35,984 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140308228572992)>', '<ExcThread(monitor, started 140307513468672)>']
[2026-01-08 07:46:45] 2026-01-08 12:46:41,009 | INFO     | all workflow threads have been joined
[2026-01-08 07:46:45] 2026-01-08 12:46:41,009 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 07:46:45] 2026-01-08 12:46:41,010 | INFO     | traces error code: 0
[2026-01-08 07:46:45] 2026-01-08 12:46:41,010 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 07:46:45] 2026-01-08 12:46:44,610 | INFO     | PID=1020261 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 07:46:45] 2026-01-08 12:46:44,610 | INFO     | .. there are 9 such processes running
[2026-01-08 07:46:45] 2026-01-08 12:46:44,621 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 07:46:45] 2026-01-08 12:46:44,621 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 07:46:45] 2026-01-08 12:46:44,621 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 07:46:45] 2026-01-08 12:46:44,621 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 07:46:45] 2026-01-08 12:46:44,621 | INFO     | [monitor] control thread has ended
[2026-01-08 07:46:45] 2026-01-08 12:46:44,943 [wrapper] ==== pilot stdout END ====
[2026-01-08 07:46:45] 2026-01-08 12:46:44,981 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 07:46:45] 2026-01-08 12:46:44,997 [wrapper] pilotpid: 1020261
[2026-01-08 07:46:45] 2026-01-08 12:46:45,043 [wrapper] Pilot exit status: 0
[2026-01-08 07:46:45] 2026-01-08 12:46:45,156 [wrapper] pandaids: 6962320003
[2026-01-08 07:46:45] 2026-01-08 12:46:45,210 [wrapper] cleanup supervisor_pilot 2025831 1020262
[2026-01-08 07:46:45] 2026-01-08 12:46:45,213 [wrapper] Test setup, not cleaning
[2026-01-08 07:46:45] 2026-01-08 12:46:45,215 [wrapper] apfmon messages muted
[2026-01-08 07:46:45] 2026-01-08 12:46:45,218 [wrapper] ==== wrapper stdout END ====
[2026-01-08 07:46:45] 2026-01-08 12:46:45,220 [wrapper] ==== wrapper stderr END ====
[2026-01-08 07:46:45]  *** Error codes and diagnostics ***
[2026-01-08 07:46:45]     "exeErrorCode": 0,
[2026-01-08 07:46:45]     "exeErrorDiag": "",
[2026-01-08 07:46:45]     "pilotErrorCode": 0,
[2026-01-08 07:46:45]     "pilotErrorDiag": "",
[2026-01-08 07:46:45]  *** Listing of results directory ***
[2026-01-08 07:46:45] total 437624
[2026-01-08 07:46:45] -rwx------. 1 boincer umatlas     36322 Jan  7 15:59 runpilot2-wrapper.sh
[2026-01-08 07:46:45] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 16:00 pilot3.tar.gz
[2026-01-08 07:46:45] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 16:04 queuedata.json
[2026-01-08 07:46:45] -rw-r--r--. 1 boincer umatlas       100 Jan  8 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 07:46:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 00:01 run_atlas
[2026-01-08 07:46:45] -rw-r--r--. 1 boincer umatlas       105 Jan  8 00:01 job.xml
[2026-01-08 07:46:45] -rw-r--r--. 2 boincer umatlas 222214746 Jan  8 00:01 EVNT.47898824._000600.pool.root.1
[2026-01-08 07:46:45] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 00:01 start_atlas.sh
[2026-01-08 07:46:45] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 00:01 shared
[2026-01-08 07:46:45] -rw-r--r--. 2 boincer umatlas    592393 Jan  8 00:01 input.tar.gz
[2026-01-08 07:46:45] -rw-r--r--. 1 boincer umatlas         0 Jan  8 00:01 boinc_lockfile
[2026-01-08 07:46:45] -rw-r--r--. 1 boincer umatlas      2519 Jan  8 00:01 pandaJob.out
[2026-01-08 07:46:45] -rw-------. 1 boincer umatlas        57 Jan  8 00:01 setup.sh.local
[2026-01-08 07:46:45] -rw-------. 1 boincer umatlas    989835 Jan  8 00:01 agis_schedconf.cvmfs.json
[2026-01-08 07:46:45] drwx------. 5 boincer umatlas      4096 Jan  8 00:01 pilot3
[2026-01-08 07:46:45] -rw-------. 1 boincer umatlas 213544130 Jan  8 07:44 HITS.47898826._013854.pool.root.1
[2026-01-08 07:46:45] -rw-r--r--. 1 boincer umatlas       531 Jan  8 07:45 boinc_task_state.xml
[2026-01-08 07:46:45] -rw-------. 1 boincer umatlas      1039 Jan  8 07:45 memory_monitor_summary.json
[2026-01-08 07:46:45] -rw-------. 1 boincer umatlas   1516240 Jan  8 07:45 agis_ddmendpoints.agis.ALL.json
[2026-01-08 07:46:45] -rw-------. 1 boincer umatlas    695492 Jan  8 07:45 log.47898826._013854.job.log.tgz.1
[2026-01-08 07:46:45] -rw-r--r--. 1 boincer umatlas      6842 Jan  8 07:46 init_data.xml
[2026-01-08 07:46:45] -rw-------. 1 boincer umatlas      7822 Jan  8 07:46 heartbeat.json
[2026-01-08 07:46:45] -rw-r--r--. 1 boincer umatlas        28 Jan  8 07:46 wrapper_checkpoint.txt
[2026-01-08 07:46:45] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 07:46 boinc_mmap_file
[2026-01-08 07:46:45] -rw-------. 1 boincer umatlas        95 Jan  8 07:46 pilot_heartbeat.json
[2026-01-08 07:46:45] -rw-------. 1 boincer umatlas       822 Jan  8 07:46 pilotlog.txt
[2026-01-08 07:46:45] -rw-------. 1 boincer umatlas   3531847 Jan  8 07:46 log.47898826._013854.job.log.1
[2026-01-08 07:46:45] -rw-------. 1 boincer umatlas       357 Jan  8 07:46 output.list
[2026-01-08 07:46:45] -rw-r--r--. 1 boincer umatlas       620 Jan  8 07:46 runtime_log
[2026-01-08 07:46:45] -rw-------. 1 boincer umatlas   4249600 Jan  8 07:46 result.tar.gz
[2026-01-08 07:46:45] -rw-r--r--. 1 boincer umatlas      9350 Jan  8 07:46 runtime_log.err
[2026-01-08 07:46:45] -rw-------. 1 boincer umatlas       658 Jan  8 07:46 AdlMDmIopx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3mdKDmvfAldn.diag
[2026-01-08 07:46:45] -rw-r--r--. 1 boincer umatlas     21437 Jan  8 07:46 stderr.txt
[2026-01-08 07:46:45] HITS file was successfully produced:
[2026-01-08 07:46:45] -rw-------. 1 boincer umatlas 213544130 Jan  8 07:44 shared/HITS.pool.root.1
[2026-01-08 07:46:45]  *** Contents of shared directory: ***
[2026-01-08 07:46:45] total 430300
[2026-01-08 07:46:45] -rw-r--r--. 2 boincer umatlas 222214746 Jan  8 00:01 ATLAS.root_0
[2026-01-08 07:46:45] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 00:01 start_atlas.sh
[2026-01-08 07:46:45] -rw-r--r--. 2 boincer umatlas    592393 Jan  8 00:01 input.tar.gz
[2026-01-08 07:46:45] -rw-------. 1 boincer umatlas 213544130 Jan  8 07:44 HITS.pool.root.1
[2026-01-08 07:46:45] -rw-------. 1 boincer umatlas   4249600 Jan  8 07:46 result.tar.gz
07:46:46 (1015953): run_atlas exited; CPU time 58472.485387
07:46:46 (1015953): called boinc_finish(0)

</stderr_txt>
]]>

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