Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:05:26 (10669): wrapper (7.7.26015): starting
11:05:26 (10669): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 11:05:26] Arguments: --nthreads 8
[2026-01-08 11:05:26] Threads: 8
[2026-01-08 11:05:26] Checking for CVMFS
[2026-01-08 11:05:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 11:05:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 11:05:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 11:05:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 11:05:29] 2.11.2.0 1091 33831 93816 154898 3 60 19587833 25165825 96 130560 0 16947171 99.825 9600948 3517 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 11:05:29] CVMFS is ok
[2026-01-08 11:05:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 11:05:29] Checking for apptainer binary...
[2026-01-08 11:05:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 11:05:29] Running /usr/bin/apptainer --version
[2026-01-08 11:05:29] apptainer version 1.3.2-1.el7
[2026-01-08 11:05:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 11:06:05] cg-vwn498.simple-grid.lan
[2026-01-08 11:06:05] apptainer works
[2026-01-08 11:06:05] Set ATHENA_PROC_NUMBER=8
[2026-01-08 11:06:05] Set ATHENA_CORE_NUMBER=8
[2026-01-08 11:06:05] Starting ATLAS job with PandaID=6962321513
[2026-01-08 11:06:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 15:51:46]  *** The last 200 lines of the pilot log: ***
[2026-01-08 15:51:47] 2026-01-08 14:50:35,374 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-08 15:51:47] 2026-01-08 14:50:35,375 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6962321513/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 15:51:47] 2026-01-08 14:50:35,376 | INFO     | extracted standard info from prmon json
[2026-01-08 15:51:47] 2026-01-08 14:50:35,377 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 15:51:47] 2026-01-08 14:50:35,377 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 15:51:47] 2026-01-08 14:50:35,377 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 15:51:47] 2026-01-08 14:50:35,377 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 15:51:47] 2026-01-08 14:50:35,382 | INFO     | fitting pss+swap vs Time
[2026-01-08 15:51:47] 2026-01-08 14:50:35,383 | INFO     | sum of square deviations: 5770452380.0
[2026-01-08 15:51:47] 2026-01-08 14:50:35,390 | INFO     | sum of deviations: 152080373802.00006
[2026-01-08 15:51:47] 2026-01-08 14:50:35,391 | INFO     | mean x: 1767875604.0
[2026-01-08 15:51:47] 2026-01-08 14:50:35,391 | INFO     | mean y: 2418037.7773584905
[2026-01-08 15:51:47] 2026-01-08 14:50:35,391 | INFO     | intersect: -46589974548.91211
[2026-01-08 15:51:47] 2026-01-08 14:50:35,391 | INFO     | chi2: 7.685145666056864
[2026-01-08 15:51:47] 2026-01-08 14:50:35,392 | INFO     | sum of square deviations: 5449944045.0
[2026-01-08 15:51:47] 2026-01-08 14:50:35,394 | INFO     | sum of deviations: 166329269252.0
[2026-01-08 15:51:47] 2026-01-08 14:50:35,394 | INFO     | mean x: 1767875451.5
[2026-01-08 15:51:47] 2026-01-08 14:50:35,394 | INFO     | mean y: 2424688.7230769233
[2026-01-08 15:51:47] 2026-01-08 14:50:35,395 | INFO     | intersect: -53952153477.32571
[2026-01-08 15:51:47] 2026-01-08 14:50:35,395 | INFO     | chi2: 6.960287527763851
[2026-01-08 15:51:47] 2026-01-08 14:50:35,395 | INFO     | current chi2=6.960287527763851 (change=9.431937529753121 %)
[2026-01-08 15:51:47] 2026-01-08 14:50:35,395 | INFO     | right removable region: 259
[2026-01-08 15:51:47] 2026-01-08 14:50:35,396 | INFO     | sum of square deviations: 5449944045.0
[2026-01-08 15:51:47] 2026-01-08 14:50:35,398 | INFO     | sum of deviations: 61898591701.499985
[2026-01-08 15:51:47] 2026-01-08 14:50:35,409 | INFO     | mean x: 1767875756.5
[2026-01-08 15:51:47] 2026-01-08 14:50:35,410 | INFO     | mean y: 2460916.4884615387
[2026-01-08 15:51:47] 2026-01-08 14:50:35,410 | INFO     | intersect: -20076464431.555897
[2026-01-08 15:51:47] 2026-01-08 14:50:35,410 | INFO     | chi2: 2.958579891462911
[2026-01-08 15:51:47] 2026-01-08 14:50:35,410 | INFO     | current chi2=2.958579891462911 (change=61.50261790703422 %)
[2026-01-08 15:51:47] 2026-01-08 14:50:35,411 | INFO     | sum of square deviations: 5141528960.0
[2026-01-08 15:51:47] 2026-01-08 14:50:35,413 | INFO     | sum of deviations: 3907368481.000004
[2026-01-08 15:51:47] 2026-01-08 14:50:35,413 | INFO     | mean x: 1767875909.0
[2026-01-08 15:51:47] 2026-01-08 14:50:35,413 | INFO     | mean y: 2489493.4039215688
[2026-01-08 15:51:47] 2026-01-08 14:50:35,413 | INFO     | intersect: -1341029654.0883121
[2026-01-08 15:51:47] 2026-01-08 14:50:35,414 | INFO     | chi2: 0.9462724337980997
[2026-01-08 15:51:47] 2026-01-08 14:50:35,414 | INFO     | current chi2=0.9462724337980997 (change=68.01599184363407 %)
[2026-01-08 15:51:47] 2026-01-08 14:50:35,414 | INFO     | sum of square deviations: 4844974562.5
[2026-01-08 15:51:47] 2026-01-08 14:50:35,416 | INFO     | sum of deviations: -11803065436.000002
[2026-01-08 15:51:47] 2026-01-08 14:50:35,417 | INFO     | mean x: 1767876061.5
[2026-01-08 15:51:47] 2026-01-08 14:50:35,417 | INFO     | mean y: 2497545.704
[2026-01-08 15:51:47] 2026-01-08 14:50:35,417 | INFO     | intersect: 4309301754.363344
[2026-01-08 15:51:47] 2026-01-08 14:50:35,417 | INFO     | chi2: 0.8020234092414763
[2026-01-08 15:51:47] 2026-01-08 14:50:35,418 | INFO     | current chi2=0.8020234092414763 (change=15.243921243446144 %)
[2026-01-08 15:51:47] 2026-01-08 14:50:35,418 | INFO     | left removable region: 30
[2026-01-08 15:51:47] 2026-01-08 14:50:35,418 | INFO     | sum of square deviations: 3723716330.0
[2026-01-08 15:51:47] 2026-01-08 14:50:35,420 | INFO     | sum of deviations: 6799274414.999999
[2026-01-08 15:51:47] 2026-01-08 14:50:35,420 | INFO     | mean x: 1767876336.0
[2026-01-08 15:51:47] 2026-01-08 14:50:35,420 | INFO     | mean y: 2504829.847161572
[2026-01-08 15:51:47] 2026-01-08 14:50:35,420 | INFO     | intersect: -3225527403.276445
[2026-01-08 15:51:47] 2026-01-08 14:50:35,421 | INFO     | chi2: 0.0038732960993096955
[2026-01-08 15:51:47] 2026-01-08 14:50:35,421 | INFO     | current memory leak: 1.83 B/s (using 229 data points, chi2=0.00)
[2026-01-08 15:51:47] 2026-01-08 14:50:35,421 | INFO     | could have reported an average CPU frequency of 2249 MHz (12 samples)
[2026-01-08 15:51:47] 2026-01-08 14:50:35,422 | INFO     | ..............................
[2026-01-08 15:51:47] 2026-01-08 14:50:35,422 | INFO     | . Timing measurements:
[2026-01-08 15:51:47] 2026-01-08 14:50:35,422 | INFO     | . get job = 0 s
[2026-01-08 15:51:47] 2026-01-08 14:50:35,422 | INFO     | . initial setup = 10 s
[2026-01-08 15:51:47] 2026-01-08 14:50:35,422 | INFO     | . payload setup = 164 s
[2026-01-08 15:51:47] 2026-01-08 14:50:35,422 | INFO     | . stage-in = 0 s
[2026-01-08 15:51:47] 2026-01-08 14:50:35,422 | INFO     | . payload execution = 16330 s
[2026-01-08 15:51:47] 2026-01-08 14:50:35,422 | INFO     | . stage-out = 4 s
[2026-01-08 15:51:47] 2026-01-08 14:50:35,422 | INFO     | . log creation = 1 s
[2026-01-08 15:51:47] 2026-01-08 14:50:35,423 | INFO     | ..............................
[2026-01-08 15:51:47] 2026-01-08 14:50:36,057 | INFO     | 
[2026-01-08 15:51:47] 2026-01-08 14:50:36,057 | INFO     | job summary report
[2026-01-08 15:51:47] 2026-01-08 14:50:36,058 | INFO     | --------------------------------------------------
[2026-01-08 15:51:47] 2026-01-08 14:50:36,058 | INFO     | PanDA job id: 6962321513
[2026-01-08 15:51:47] 2026-01-08 14:50:36,058 | INFO     | task id: 47898826
[2026-01-08 15:51:47] 2026-01-08 14:50:36,058 | INFO     | errors: (none)
[2026-01-08 15:51:47] 2026-01-08 14:50:36,058 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 15:51:47] 2026-01-08 14:50:36,058 | INFO     | pilot state: finished 
[2026-01-08 15:51:47] 2026-01-08 14:50:36,058 | INFO     | transexitcode: 0
[2026-01-08 15:51:47] 2026-01-08 14:50:36,059 | INFO     | exeerrorcode: 0
[2026-01-08 15:51:47] 2026-01-08 14:50:36,059 | INFO     | exeerrordiag: 
[2026-01-08 15:51:47] 2026-01-08 14:50:36,059 | INFO     | exitcode: 0
[2026-01-08 15:51:47] 2026-01-08 14:50:36,059 | INFO     | exitmsg: OK
[2026-01-08 15:51:47] 2026-01-08 14:50:36,059 | INFO     | cpuconsumptiontime: 72890 s
[2026-01-08 15:51:47] 2026-01-08 14:50:36,059 | INFO     | nevents: 400
[2026-01-08 15:51:47] 2026-01-08 14:50:36,059 | INFO     | neventsw: 0
[2026-01-08 15:51:47] 2026-01-08 14:50:36,059 | INFO     | pid: 20893
[2026-01-08 15:51:47] 2026-01-08 14:50:36,059 | INFO     | pgrp: 20893
[2026-01-08 15:51:47] 2026-01-08 14:50:36,059 | INFO     | corecount: 8
[2026-01-08 15:51:47] 2026-01-08 14:50:36,059 | INFO     | event service: False
[2026-01-08 15:51:47] 2026-01-08 14:50:36,060 | INFO     | sizes: {0: 2283141, 1: 2283997, 2: 2284025, 12: 2284025, 23: 2284053, 34: 2284081, 45: 2284237, 55: 2284265, 66: 2284293, 77: 2284321, 87: 2284377, 98: 2284685, 10
[2026-01-08 15:51:47] 2026-01-08 14:50:36,060 | INFO     | --------------------------------------------------
[2026-01-08 15:51:47] 2026-01-08 14:50:36,060 | INFO     | 
[2026-01-08 15:51:47] 2026-01-08 14:50:36,060 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-08 15:51:47] 2026-01-08 14:50:36,420 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 15:51:47] 2026-01-08 14:50:36,420 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 15:51:47] 2026-01-08 14:50:36,420 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 15:51:47] 2026-01-08 14:50:36,420 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 15:51:47] 2026-01-08 14:50:36,420 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 15:51:47] 2026-01-08 14:50:36,421 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 15:51:47] 2026-01-08 14:50:36,421 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 15:51:47] 2026-01-08 14:50:36,421 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 15:51:47] 2026-01-08 14:50:36,421 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 15:51:47] 2026-01-08 14:50:36,421 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 15:51:47] 2026-01-08 14:50:36,421 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 15:51:47] 2026-01-08 14:50:36,421 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 15:51:47] 2026-01-08 14:50:36,421 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 15:51:47] 2026-01-08 14:50:36,421 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 15:51:47] 2026-01-08 14:50:36,422 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 15:51:47] 2026-01-08 14:50:36,422 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 15:51:47] 2026-01-08 14:50:36,422 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 15:51:47] 2026-01-08 14:50:36,422 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 15:51:47] 2026-01-08 14:50:36,422 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 15:51:47] 2026-01-08 14:50:36,422 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 15:51:47] 2026-01-08 14:50:36,422 | INFO     | job 6962321513 has completed (purged errors)
[2026-01-08 15:51:47] 2026-01-08 14:50:36,422 | INFO     | overall cleanup function is called
[2026-01-08 15:51:47] 2026-01-08 14:50:37,438 | INFO     | --- collectZombieJob: --- 10, [20893]
[2026-01-08 15:51:47] 2026-01-08 14:50:37,438 | INFO     | zombie collector waiting for pid 20893
[2026-01-08 15:51:47] 2026-01-08 14:50:37,439 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 15:51:47] 2026-01-08 14:50:37,439 | INFO     | collected zombie processes
[2026-01-08 15:51:47] 2026-01-08 14:50:37,439 | INFO     | will attempt to kill all subprocesses of pid=20893
[2026-01-08 15:51:47] 2026-01-08 14:50:37,531 | INFO     | process IDs to be killed: [20893] (in reverse order)
[2026-01-08 15:51:47] 2026-01-08 14:50:38,245 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 15:51:47] 2026-01-08 14:50:38,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 15:51:47] 2026-01-08 14:50:38,248 | INFO     | did not find any defunct processes belonging to 20893
[2026-01-08 15:51:47] 2026-01-08 14:50:38,249 | INFO     | did not find any defunct processes belonging to 20893
[2026-01-08 15:51:47] 2026-01-08 14:50:38,250 | INFO     | ready for new job
[2026-01-08 15:51:47] 2026-01-08 14:50:38,250 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 15:51:47] 2026-01-08 14:50:38,252 | INFO     | ***************************************
[2026-01-08 15:51:47] 2026-01-08 14:50:38,252 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 15:51:47] 2026-01-08 14:50:38,252 | INFO     | ***************************************
[2026-01-08 15:51:47] 2026-01-08 14:50:38,252 | INFO     | 
[2026-01-08 15:51:47] 2026-01-08 14:50:38,253 | INFO     | pilot is running in a VM
[2026-01-08 15:51:47] 2026-01-08 14:50:38,253 | INFO     | architecture information:
[2026-01-08 15:51:47] 2026-01-08 14:50:38,263 | INFO     | executing command: cat /etc/os-release
[2026-01-08 15:51:47] 2026-01-08 14:50:38,565 | INFO     | cat /etc/os-release:
[2026-01-08 15:51:47] NAME="CentOS Linux"
[2026-01-08 15:51:47] VERSION="7 (Core)"
[2026-01-08 15:51:47] ID="centos"
[2026-01-08 15:51:47] ID_LIKE="rhel fedora"
[2026-01-08 15:51:47] VERSION_ID="7"
[2026-01-08 15:51:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 15:51:47] ANSI_COLOR="0;31"
[2026-01-08 15:51:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 15:51:47] HOME_URL="https://www.centos.org/"
[2026-01-08 15:51:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 15:51:47] 
[2026-01-08 15:51:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 15:51:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 15:51:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 15:51:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 15:51:47] 
[2026-01-08 15:51:47] 2026-01-08 14:50:38,565 | INFO     | ***************************************
[2026-01-08 15:51:47] 2026-01-08 14:50:39,068 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-08 15:51:47] 2026-01-08 14:50:39,269 | INFO     | sufficient remaining disk space (498257100800 B)
[2026-01-08 15:51:47] 2026-01-08 14:50:39,269 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 15:51:47] 2026-01-08 14:50:39,269 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 15:51:47] 2026-01-08 14:50:39,269 | INFO     | update_server=False
[2026-01-08 15:51:47] 2026-01-08 14:50:39,270 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 15:51:47] 2026-01-08 14:50:39,276 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 15:51:47] 2026-01-08 14:50:39,632 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 15:51:47] 2026-01-08 14:50:39,632 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 15:51:47] 2026-01-08 14:50:39,633 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 15:51:47] 2026-01-08 14:50:39,633 | INFO     | will abort loop
[2026-01-08 15:51:47] 2026-01-08 14:50:39,903 | INFO     | all payload control threads have been joined
[2026-01-08 15:51:47] 2026-01-08 14:50:40,131 | INFO     | all data control threads have been joined
[2026-01-08 15:51:47] 2026-01-08 14:50:40,275 | INFO     | [job] retrieve thread has finished
[2026-01-08 15:51:47] 2026-01-08 14:50:40,297 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 15:51:47] 2026-01-08 14:50:40,440 | INFO     | [data] copytool_in thread has finished
[2026-01-08 15:51:47] 2026-01-08 14:50:40,441 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 15:51:47] 2026-01-08 14:50:40,580 | INFO     | [payload] validate_post thread has finished
[2026-01-08 15:51:47] 2026-01-08 14:50:40,582 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 15:51:47] 2026-01-08 14:50:40,638 | INFO     | [job] job monitor thread has finished
[2026-01-08 15:51:47] 2026-01-08 14:50:40,658 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 15:51:47] 2026-01-08 14:50:40,748 | INFO     | all job control threads have been joined
[2026-01-08 15:51:47] 2026-01-08 14:50:40,808 | INFO     | [job] validate thread has finished
[2026-01-08 15:51:47] 2026-01-08 14:50:40,909 | INFO     | [payload] control thread has finished
[2026-01-08 15:51:47] 2026-01-08 14:50:41,137 | INFO     | [data] control thread has finished
[2026-01-08 15:51:47] 2026-01-08 14:50:41,158 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 15:51:47] 2026-01-08 14:50:41,283 | INFO     | [data] copytool_out thread has finished
[2026-01-08 15:51:47] 2026-01-08 14:50:41,429 | INFO     | [payload] failed_post thread has finished
[2026-01-08 15:51:47] 2026-01-08 14:50:41,588 | INFO     | [job] queue monitor thread has finished
[2026-01-08 15:51:47] 2026-01-08 14:50:41,622 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 15:51:47] 2026-01-08 14:50:41,754 | INFO     | [job] control thread has finished
[2026-01-08 15:51:47] 2026-01-08 14:50:44,667 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 15:51:47] 2026-01-08 14:51:08,138 | INFO     | PID=14413 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 15:51:47] 2026-01-08 14:51:08,139 | INFO     | .. there are 2 such processes running
[2026-01-08 15:51:47] 2026-01-08 14:51:08,140 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 15:51:47] 2026-01-08 14:51:08,140 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 15:51:47] 2026-01-08 14:51:08,140 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 15:51:47] 2026-01-08 14:51:36,737 | INFO     | [monitor] cgroup control has ended
[2026-01-08 15:51:47] 2026-01-08 14:51:37,038 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140201965868864)>', '<ExcThread(monitor, started 140201506608896)>']
[2026-01-08 15:51:47] 2026-01-08 14:51:37,315 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 15:51:47] 2026-01-08 14:51:37,315 | INFO     | [monitor] control thread has ended
[2026-01-08 15:51:47] 2026-01-08 14:51:42,064 | INFO     | all workflow threads have been joined
[2026-01-08 15:51:47] 2026-01-08 14:51:42,064 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 15:51:47] 2026-01-08 14:51:42,065 | INFO     | traces error code: 0
[2026-01-08 15:51:47] 2026-01-08 14:51:42,065 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 15:51:47] 2026-01-08 14:51:42,448 [wrapper] ==== pilot stdout END ====
[2026-01-08 15:51:47] 2026-01-08 14:51:42,540 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 15:51:47] 2026-01-08 14:51:42,665 [wrapper] pilotpid: 14413
[2026-01-08 15:51:47] 2026-01-08 14:51:42,777 [wrapper] Pilot exit status: 0
[2026-01-08 15:51:47] 2026-01-08 14:51:43,186 [wrapper] pandaids: 6962321513
[2026-01-08 15:51:47] 2026-01-08 14:51:44,257 [wrapper] cleanup supervisor_pilot 30965 14414
[2026-01-08 15:51:47] 2026-01-08 14:51:44,374 [wrapper] Test setup, not cleaning
[2026-01-08 15:51:47] 2026-01-08 14:51:44,464 [wrapper] apfmon messages muted
[2026-01-08 15:51:47] 2026-01-08 14:51:44,540 [wrapper] ==== wrapper stdout END ====
[2026-01-08 15:51:47] 2026-01-08 14:51:44,623 [wrapper] ==== wrapper stderr END ====
[2026-01-08 15:51:47]  *** Error codes and diagnostics ***
[2026-01-08 15:51:47]     "exeErrorCode": 0,
[2026-01-08 15:51:47]     "exeErrorDiag": "",
[2026-01-08 15:51:47]     "pilotErrorCode": 0,
[2026-01-08 15:51:47]     "pilotErrorDiag": "",
[2026-01-08 15:51:47]  *** Listing of results directory ***
[2026-01-08 15:51:47] total 447928
[2026-01-08 15:51:47] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 15:51:47] -rwx------. 1 boinc boinc     36322 Jan  7 22:09 runpilot2-wrapper.sh
[2026-01-08 15:51:47] -rw-r--r--. 1 boinc boinc      5112 Jan  7 22:16 queuedata.json
[2026-01-08 15:51:47] -rw-r--r--. 1 boinc boinc       100 Jan  8 11:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 15:51:47] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 11:05 run_atlas
[2026-01-08 15:51:47] -rw-r--r--. 1 boinc boinc       105 Jan  8 11:05 job.xml
[2026-01-08 15:51:47] -rw-r--r--. 1 boinc boinc      6390 Jan  8 11:05 init_data.xml
[2026-01-08 15:51:47] -rw-r--r--. 2 boinc boinc 228022101 Jan  8 11:05 EVNT.47898824._000687.pool.root.1
[2026-01-08 15:51:47] -rw-r--r--. 2 boinc boinc     15847 Jan  8 11:05 start_atlas.sh
[2026-01-08 15:51:47] drwxrwx--x. 2 boinc boinc        68 Jan  8 11:05 shared
[2026-01-08 15:51:47] -rw-r--r--. 2 boinc boinc    592406 Jan  8 11:05 input.tar.gz
[2026-01-08 15:51:47] -rw-r--r--. 1 boinc boinc         0 Jan  8 11:05 boinc_lockfile
[2026-01-08 15:51:47] -rw-r--r--. 1 boinc boinc      2519 Jan  8 11:06 pandaJob.out
[2026-01-08 15:51:47] -rw-------. 1 boinc boinc    989843 Jan  8 11:10 agis_schedconf.cvmfs.json
[2026-01-08 15:51:47] drwx------. 5 boinc boinc      4096 Jan  8 11:10 pilot3
[2026-01-08 15:51:47] -rw-------. 1 boinc boinc 221245926 Jan  8 15:47 HITS.47898826._014714.pool.root.1
[2026-01-08 15:51:47] -rw-r--r--. 1 boinc boinc       531 Jan  8 15:47 boinc_task_state.xml
[2026-01-08 15:51:47] -rw-------. 1 boinc boinc      1020 Jan  8 15:48 memory_monitor_summary.json
[2026-01-08 15:51:47] -rw-------. 1 boinc boinc   1516240 Jan  8 15:48 agis_ddmendpoints.agis.ALL.json
[2026-01-08 15:51:47] -rw-------. 1 boinc boinc    502622 Jan  8 15:48 log.47898826._014714.job.log.tgz.1
[2026-01-08 15:51:47] -rw-------. 1 boinc boinc      7786 Jan  8 15:50 heartbeat.json
[2026-01-08 15:51:47] -rw-------. 1 boinc boinc        95 Jan  8 15:51 pilot_heartbeat.json
[2026-01-08 15:51:47] -rw-r--r--. 1 boinc boinc      8192 Jan  8 15:51 boinc_mmap_file
[2026-01-08 15:51:47] -rw-r--r--. 1 boinc boinc        28 Jan  8 15:51 wrapper_checkpoint.txt
[2026-01-08 15:51:47] -rw-------. 1 boinc boinc      5070 Jan  8 15:51 pilotlog.txt
[2026-01-08 15:51:47] -rw-------. 1 boinc boinc   2249133 Jan  8 15:51 log.47898826._014714.job.log.1
[2026-01-08 15:51:47] -rw-------. 1 boinc boinc       357 Jan  8 15:51 output.list
[2026-01-08 15:51:47] -rw-r--r--. 1 boinc boinc       620 Jan  8 15:51 runtime_log
[2026-01-08 15:51:47] -rw-------. 1 boinc boinc   2775040 Jan  8 15:51 result.tar.gz
[2026-01-08 15:51:47] -rw-------. 1 boinc boinc       657 Jan  8 15:51 wWeMDmQxpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm92dKDmZMA74n.diag
[2026-01-08 15:51:47] -rw-r--r--. 1 boinc boinc      8817 Jan  8 15:51 runtime_log.err
[2026-01-08 15:51:47] -rw-r--r--. 1 boinc boinc     20785 Jan  8 15:51 stderr.txt
[2026-01-08 15:51:47] HITS file was successfully produced:
[2026-01-08 15:51:47] -rw-------. 1 boinc boinc 221245926 Jan  8 15:47 shared/HITS.pool.root.1
[2026-01-08 15:51:47]  *** Contents of shared directory: ***
[2026-01-08 15:51:47] total 442052
[2026-01-08 15:51:47] -rw-r--r--. 2 boinc boinc 228022101 Jan  8 11:05 ATLAS.root_0
[2026-01-08 15:51:47] -rw-r--r--. 2 boinc boinc     15847 Jan  8 11:05 start_atlas.sh
[2026-01-08 15:51:47] -rw-r--r--. 2 boinc boinc    592406 Jan  8 11:05 input.tar.gz
[2026-01-08 15:51:47] -rw-------. 1 boinc boinc 221245926 Jan  8 15:47 HITS.pool.root.1
[2026-01-08 15:51:47] -rw-------. 1 boinc boinc   2775040 Jan  8 15:51 result.tar.gz
15:51:48 (10669): run_atlas exited; CPU time 73052.136350
15:51:48 (10669): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN