Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:21:08 (1783901): wrapper (7.7.26015): starting
23:21:08 (1783901): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 23:21:08] Arguments: --nthreads 8
[2026-01-07 23:21:08] Threads: 8
[2026-01-07 23:21:08] Checking for CVMFS
[2026-01-07 23:21:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 23:21:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 23:21:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 23:21:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 23:21:10] 2.13.3.0 10749 47797 479208 154891 1 210 17419391 32935701 46429 16776704 0 494019876 99.781 269683641 29046 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-07 23:21:10] CVMFS is ok
[2026-01-07 23:21:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 23:21:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 23:21:10] Further information can be found at the LHC@home message board.
[2026-01-07 23:21:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 23:21:10] Checking for apptainer binary...
[2026-01-07 23:21:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 23:21:10] Running /usr/bin/apptainer --version
[2026-01-07 23:21:11] apptainer version 1.4.5-2.el9
[2026-01-07 23:21:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 23:21:11] lc-12-33.aglt2.org
[2026-01-07 23:21:11] apptainer works
[2026-01-07 23:21:11] Set ATHENA_PROC_NUMBER=8
[2026-01-07 23:21:11] Set ATHENA_CORE_NUMBER=8
[2026-01-07 23:21:11] Starting ATLAS job with PandaID=6962317416
[2026-01-07 23:21:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 05:27:13]  *** The last 200 lines of the pilot log: ***
[2026-01-08 05:27:13] 2026-01-08 10:26:29,581 | INFO     | time since job start (21844s) is within the limit (174528.0s)
[2026-01-08 05:27:13] 2026-01-08 10:26:30,484 | INFO     | monitor loop #1181: job 0:6962317416 is in state 'finished'
[2026-01-08 05:27:13] 2026-01-08 10:26:30,484 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 05:27:13] 2026-01-08 10:26:31,588 | INFO     | time since job start (21846s) is within the limit (174528.0s)
[2026-01-08 05:27:13] 2026-01-08 10:26:32,992 | INFO     | monitor loop #1182: job 0:6962317416 is in state 'finished'
[2026-01-08 05:27:13] 2026-01-08 10:26:33,007 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 05:27:13] 2026-01-08 10:26:33,594 | INFO     | time since job start (21848s) is within the limit (174528.0s)
[2026-01-08 05:27:13] 2026-01-08 10:26:35,275 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-08 05:27:13] 2026-01-08 10:26:35,302 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2830.2171250000006
[2026-01-08 05:27:13] 2026-01-08 10:26:35,324 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6962317416/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 05:27:13] 2026-01-08 10:26:35,325 | INFO     | extracted standard info from prmon json
[2026-01-08 05:27:13] 2026-01-08 10:26:35,325 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 05:27:13] 2026-01-08 10:26:35,325 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 05:27:13] 2026-01-08 10:26:35,325 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 05:27:13] 2026-01-08 10:26:35,325 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 05:27:13] 2026-01-08 10:26:35,330 | INFO     | fitting pss+swap vs Time
[2026-01-08 05:27:13] 2026-01-08 10:26:35,331 | INFO     | sum of square deviations: 13990646758.255682
[2026-01-08 05:27:13] 2026-01-08 10:26:35,334 | INFO     | sum of deviations: 68811369868.05348
[2026-01-08 05:27:13] 2026-01-08 10:26:35,334 | INFO     | mean x: 1767857120.6376405
[2026-01-08 05:27:13] 2026-01-08 10:26:35,334 | INFO     | mean y: 2495650.6825842694
[2026-01-08 05:27:13] 2026-01-08 10:26:35,334 | INFO     | intersect: -8692504109.088032
[2026-01-08 05:27:13] 2026-01-08 10:26:35,335 | INFO     | chi2: 4.037551000973799
[2026-01-08 05:27:13] 2026-01-08 10:26:35,335 | INFO     | sum of square deviations: 13409379098.706522
[2026-01-08 05:27:13] 2026-01-08 10:26:35,338 | INFO     | sum of deviations: 91621935046.96011
[2026-01-08 05:27:13] 2026-01-08 10:26:35,338 | INFO     | mean x: 1767856968.133903
[2026-01-08 05:27:13] 2026-01-08 10:26:35,338 | INFO     | mean y: 2501563.532763533
[2026-01-08 05:27:13] 2026-01-08 10:26:35,338 | INFO     | intersect: -12076691299.491331
[2026-01-08 05:27:13] 2026-01-08 10:26:35,339 | INFO     | chi2: 3.2710147926354813
[2026-01-08 05:27:13] 2026-01-08 10:26:35,339 | INFO     | current chi2=3.2710147926354813 (change=18.98517710744559 %)
[2026-01-08 05:27:13] 2026-01-08 10:26:35,339 | INFO     | right removable region: 350
[2026-01-08 05:27:13] 2026-01-08 10:26:35,339 | INFO     | sum of square deviations: 13409393008.159515
[2026-01-08 05:27:13] 2026-01-08 10:26:35,342 | INFO     | sum of deviations: -30661906380.666653
[2026-01-08 05:27:13] 2026-01-08 10:26:35,342 | INFO     | mean x: 1767857273.1396012
[2026-01-08 05:27:13] 2026-01-08 10:26:35,342 | INFO     | mean y: 2521701.6666666665
[2026-01-08 05:27:13] 2026-01-08 10:26:35,342 | INFO     | intersect: 4044902603.6510606
[2026-01-08 05:27:13] 2026-01-08 10:26:35,343 | INFO     | chi2: 1.0920880382834697
[2026-01-08 05:27:13] 2026-01-08 10:26:35,343 | INFO     | current chi2=1.0920880382834697 (change=72.95172152574484 %)
[2026-01-08 05:27:13] 2026-01-08 10:26:35,343 | INFO     | sum of square deviations: 12844465145.560692
[2026-01-08 05:27:13] 2026-01-08 10:26:35,346 | INFO     | sum of deviations: -51232667090.433525
[2026-01-08 05:27:13] 2026-01-08 10:26:35,346 | INFO     | mean x: 1767857425.6416185
[2026-01-08 05:27:13] 2026-01-08 10:26:35,346 | INFO     | mean y: 2527236.988439306
[2026-01-08 05:27:13] 2026-01-08 10:26:35,347 | INFO     | intersect: 7053973126.313883
[2026-01-08 05:27:13] 2026-01-08 10:26:35,347 | INFO     | chi2: 0.9429410177352687
[2026-01-08 05:27:13] 2026-01-08 10:26:35,347 | INFO     | current chi2=0.9429410177352687 (change=13.65705101784911 %)
[2026-01-08 05:27:13] 2026-01-08 10:26:35,347 | INFO     | left removable region: 20
[2026-01-08 05:27:13] 2026-01-08 10:26:35,348 | INFO     | sum of square deviations: 11143692422.363674
[2026-01-08 05:27:13] 2026-01-08 10:26:35,350 | INFO     | sum of deviations: -34918513421.54543
[2026-01-08 05:27:13] 2026-01-08 10:26:35,350 | INFO     | mean x: 1767857547.6363637
[2026-01-08 05:27:13] 2026-01-08 10:26:35,350 | INFO     | mean y: 2535947.278787879
[2026-01-08 05:27:13] 2026-01-08 10:26:35,350 | INFO     | intersect: 5542078422.503269
[2026-01-08 05:27:13] 2026-01-08 10:26:35,351 | INFO     | chi2: 0.10291188686744275
[2026-01-08 05:27:13] 2026-01-08 10:26:35,351 | INFO     | current memory leak: -3.13 B/s (using 330 data points, chi2=0.10)
[2026-01-08 05:27:13] 2026-01-08 10:26:35,351 | INFO     | could have reported an average CPU frequency of 2750 MHz (15 samples)
[2026-01-08 05:27:13] 2026-01-08 10:26:35,352 | INFO     | ..............................
[2026-01-08 05:27:13] 2026-01-08 10:26:35,352 | INFO     | . Timing measurements:
[2026-01-08 05:27:13] 2026-01-08 10:26:35,352 | INFO     | . get job = 0 s
[2026-01-08 05:27:13] 2026-01-08 10:26:35,352 | INFO     | . initial setup = 6 s
[2026-01-08 05:27:13] 2026-01-08 10:26:35,352 | INFO     | . payload setup = 48 s
[2026-01-08 05:27:13] 2026-01-08 10:26:35,352 | INFO     | . stage-in = 0 s
[2026-01-08 05:27:13] 2026-01-08 10:26:35,352 | INFO     | . payload execution = 21695 s
[2026-01-08 05:27:13] 2026-01-08 10:26:35,352 | INFO     | . stage-out = 4 s
[2026-01-08 05:27:13] 2026-01-08 10:26:35,352 | INFO     | . log creation = 0 s
[2026-01-08 05:27:13] 2026-01-08 10:26:35,352 | INFO     | ..............................
[2026-01-08 05:27:13] 2026-01-08 10:26:35,601 | INFO     | 
[2026-01-08 05:27:13] 2026-01-08 10:26:35,601 | INFO     | job summary report
[2026-01-08 05:27:13] 2026-01-08 10:26:35,602 | INFO     | --------------------------------------------------
[2026-01-08 05:27:13] 2026-01-08 10:26:35,602 | INFO     | PanDA job id: 6962317416
[2026-01-08 05:27:13] 2026-01-08 10:26:35,602 | INFO     | task id: 47898826
[2026-01-08 05:27:13] 2026-01-08 10:26:35,602 | INFO     | errors: (none)
[2026-01-08 05:27:13] 2026-01-08 10:26:35,602 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 05:27:13] 2026-01-08 10:26:35,602 | INFO     | pilot state: finished 
[2026-01-08 05:27:13] 2026-01-08 10:26:35,602 | INFO     | transexitcode: 0
[2026-01-08 05:27:13] 2026-01-08 10:26:35,602 | INFO     | exeerrorcode: 0
[2026-01-08 05:27:13] 2026-01-08 10:26:35,602 | INFO     | exeerrordiag: 
[2026-01-08 05:27:13] 2026-01-08 10:26:35,602 | INFO     | exitcode: 0
[2026-01-08 05:27:13] 2026-01-08 10:26:35,602 | INFO     | exitmsg: OK
[2026-01-08 05:27:13] 2026-01-08 10:26:35,602 | INFO     | cpuconsumptiontime: 62930 s
[2026-01-08 05:27:13] 2026-01-08 10:26:35,602 | INFO     | nevents: 400
[2026-01-08 05:27:13] 2026-01-08 10:26:35,602 | INFO     | neventsw: 0
[2026-01-08 05:27:13] 2026-01-08 10:26:35,603 | INFO     | pid: 1832761
[2026-01-08 05:27:13] 2026-01-08 10:26:35,603 | INFO     | pgrp: 1832761
[2026-01-08 05:27:13] 2026-01-08 10:26:35,603 | INFO     | corecount: 8
[2026-01-08 05:27:13] 2026-01-08 10:26:35,603 | INFO     | event service: False
[2026-01-08 05:27:13] 2026-01-08 10:26:35,603 | INFO     | sizes: {0: 2283140, 1: 2283825, 2: 2283853, 3: 2284052, 14: 2284052, 25: 2284080, 33: 2284498, 36: 2284554, 21748: 2318131, 21753: 2327129, 21754: 2327185, 21783: 
[2026-01-08 05:27:13] 2026-01-08 10:26:35,603 | INFO     | --------------------------------------------------
[2026-01-08 05:27:13] 2026-01-08 10:26:35,603 | INFO     | 
[2026-01-08 05:27:13] 2026-01-08 10:26:35,603 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-08 05:27:13] 2026-01-08 10:26:35,719 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 05:27:13] 2026-01-08 10:26:35,719 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 05:27:13] 2026-01-08 10:26:35,719 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 05:27:13] 2026-01-08 10:26:35,719 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 05:27:13] 2026-01-08 10:26:35,719 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 05:27:13] 2026-01-08 10:26:35,719 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 05:27:13] 2026-01-08 10:26:35,719 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 05:27:13] 2026-01-08 10:26:35,719 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 05:27:13] 2026-01-08 10:26:35,719 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 05:27:13] 2026-01-08 10:26:35,719 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 05:27:13] 2026-01-08 10:26:35,720 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 05:27:13] 2026-01-08 10:26:35,720 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 05:27:13] 2026-01-08 10:26:35,720 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 05:27:13] 2026-01-08 10:26:35,720 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 05:27:13] 2026-01-08 10:26:35,720 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 05:27:13] 2026-01-08 10:26:35,720 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 05:27:13] 2026-01-08 10:26:35,720 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 05:27:13] 2026-01-08 10:26:35,720 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 05:27:13] 2026-01-08 10:26:35,720 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 05:27:13] 2026-01-08 10:26:35,720 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 05:27:13] 2026-01-08 10:26:35,720 | INFO     | job 6962317416 has completed (purged errors)
[2026-01-08 05:27:13] 2026-01-08 10:26:35,720 | INFO     | overall cleanup function is called
[2026-01-08 05:27:13] 2026-01-08 10:26:36,154 | INFO     | PID=1804439 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 05:27:13] 2026-01-08 10:26:36,154 | INFO     | .. there are 75 such processes running
[2026-01-08 05:27:13] 2026-01-08 10:26:36,733 | INFO     | --- collectZombieJob: --- 10, [1832761]
[2026-01-08 05:27:13] 2026-01-08 10:26:36,733 | INFO     | zombie collector waiting for pid 1832761
[2026-01-08 05:27:13] 2026-01-08 10:26:36,734 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 05:27:13] 2026-01-08 10:26:36,734 | INFO     | collected zombie processes
[2026-01-08 05:27:13] 2026-01-08 10:26:36,734 | INFO     | will attempt to kill all subprocesses of pid=1832761
[2026-01-08 05:27:13] 2026-01-08 10:26:37,775 | INFO     | process IDs to be killed: [1832761] (in reverse order)
[2026-01-08 05:27:13] 2026-01-08 10:26:38,025 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 05:27:13] 2026-01-08 10:26:38,028 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 05:27:13] 2026-01-08 10:26:38,174 | INFO     | did not find any defunct processes belonging to 1832761
[2026-01-08 05:27:13] 2026-01-08 10:26:38,259 | INFO     | did not find any defunct processes belonging to 1832761
[2026-01-08 05:27:13] 2026-01-08 10:26:38,259 | INFO     | ready for new job
[2026-01-08 05:27:13] 2026-01-08 10:26:38,259 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 05:27:13] 2026-01-08 10:26:38,266 | INFO     | ***************************************
[2026-01-08 05:27:13] 2026-01-08 10:26:38,273 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 05:27:13] 2026-01-08 10:26:38,273 | INFO     | ***************************************
[2026-01-08 05:27:13] 2026-01-08 10:26:38,274 | INFO     | 
[2026-01-08 05:27:13] 2026-01-08 10:26:38,283 | INFO     | architecture information:
[2026-01-08 05:27:13] 2026-01-08 10:26:38,284 | INFO     | executing command: cat /etc/os-release
[2026-01-08 05:27:13] 2026-01-08 10:26:38,347 | INFO     | cat /etc/os-release:
[2026-01-08 05:27:13] NAME="CentOS Linux"
[2026-01-08 05:27:13] VERSION="7 (Core)"
[2026-01-08 05:27:13] ID="centos"
[2026-01-08 05:27:13] ID_LIKE="rhel fedora"
[2026-01-08 05:27:13] VERSION_ID="7"
[2026-01-08 05:27:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 05:27:13] ANSI_COLOR="0;31"
[2026-01-08 05:27:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 05:27:13] HOME_URL="https://www.centos.org/"
[2026-01-08 05:27:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 05:27:13] 
[2026-01-08 05:27:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 05:27:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 05:27:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 05:27:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 05:27:13] 
[2026-01-08 05:27:13] 2026-01-08 10:26:38,348 | INFO     | ***************************************
[2026-01-08 05:27:13] 2026-01-08 10:26:38,854 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-08 05:27:13] 2026-01-08 10:26:38,906 | INFO     | sufficient remaining disk space (73716989952 B)
[2026-01-08 05:27:13] 2026-01-08 10:26:38,906 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 05:27:13] 2026-01-08 10:26:38,906 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 05:27:13] 2026-01-08 10:26:38,906 | INFO     | update_server=False
[2026-01-08 05:27:13] 2026-01-08 10:26:38,906 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 05:27:13] 2026-01-08 10:26:38,906 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 05:27:13] 2026-01-08 10:26:38,999 | INFO     | all payload control threads have been joined
[2026-01-08 05:27:13] 2026-01-08 10:26:39,082 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 05:27:13] 2026-01-08 10:26:39,083 | INFO     | aborting loop
[2026-01-08 05:27:13] 2026-01-08 10:26:39,570 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 05:27:13] 2026-01-08 10:26:39,703 | INFO     | all data control threads have been joined
[2026-01-08 05:27:13] 2026-01-08 10:26:39,820 | INFO     | all job control threads have been joined
[2026-01-08 05:27:13] 2026-01-08 10:26:39,912 | INFO     | [job] retrieve thread has finished
[2026-01-08 05:27:13] 2026-01-08 10:26:39,985 | INFO     | [payload] failed_post thread has finished
[2026-01-08 05:27:13] 2026-01-08 10:26:40,004 | INFO     | [payload] control thread has finished
[2026-01-08 05:27:13] 2026-01-08 10:26:40,088 | INFO     | [job] job monitor thread has finished
[2026-01-08 05:27:13] 2026-01-08 10:26:40,102 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 05:27:13] 2026-01-08 10:26:40,239 | INFO     | [payload] validate_post thread has finished
[2026-01-08 05:27:13] 2026-01-08 10:26:40,438 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 05:27:13] 2026-01-08 10:26:40,469 | INFO     | [data] copytool_in thread has finished
[2026-01-08 05:27:13] 2026-01-08 10:26:40,578 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 05:27:13] 2026-01-08 10:26:40,582 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 05:27:13] 2026-01-08 10:26:40,627 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 05:27:13] 2026-01-08 10:26:40,709 | INFO     | [data] control thread has finished
[2026-01-08 05:27:13] 2026-01-08 10:26:40,828 | INFO     | [job] control thread has finished
[2026-01-08 05:27:13] 2026-01-08 10:26:40,916 | INFO     | [data] copytool_out thread has finished
[2026-01-08 05:27:13] 2026-01-08 10:26:41,253 | INFO     | [job] validate thread has finished
[2026-01-08 05:27:13] 2026-01-08 10:26:41,644 | INFO     | [job] queue monitor thread has finished
[2026-01-08 05:27:13] 2026-01-08 10:26:43,579 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 05:27:13] 2026-01-08 10:27:04,151 | INFO     | [monitor] cgroup control has ended
[2026-01-08 05:27:13] 2026-01-08 10:27:06,035 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139696985868096)>', '<ExcThread(monitor, started 139696613086976)>']
[2026-01-08 05:27:13] 2026-01-08 10:27:09,921 | INFO     | PID=1804439 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 05:27:13] 2026-01-08 10:27:09,921 | INFO     | .. there are 75 such processes running
[2026-01-08 05:27:13] 2026-01-08 10:27:09,921 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 05:27:13] 2026-01-08 10:27:09,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 05:27:13] 2026-01-08 10:27:09,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 05:27:13] 2026-01-08 10:27:09,922 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 05:27:13] 2026-01-08 10:27:09,922 | INFO     | [monitor] control thread has ended
[2026-01-08 05:27:13] 2026-01-08 10:27:11,061 | INFO     | all workflow threads have been joined
[2026-01-08 05:27:13] 2026-01-08 10:27:11,061 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 05:27:13] 2026-01-08 10:27:11,062 | INFO     | traces error code: 0
[2026-01-08 05:27:13] 2026-01-08 10:27:11,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 05:27:13] 2026-01-08 10:27:11,382 [wrapper] ==== pilot stdout END ====
[2026-01-08 05:27:13] 2026-01-08 10:27:11,422 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 05:27:13] 2026-01-08 10:27:11,442 [wrapper] pilotpid: 1804439
[2026-01-08 05:27:13] 2026-01-08 10:27:11,478 [wrapper] Pilot exit status: 0
[2026-01-08 05:27:13] 2026-01-08 10:27:11,556 [wrapper] pandaids: 6962317416
[2026-01-08 05:27:13] 2026-01-08 10:27:12,485 [wrapper] cleanup supervisor_pilot 2936339 1804440
[2026-01-08 05:27:13] 2026-01-08 10:27:12,518 [wrapper] Test setup, not cleaning
[2026-01-08 05:27:13] 2026-01-08 10:27:12,532 [wrapper] apfmon messages muted
[2026-01-08 05:27:13] 2026-01-08 10:27:12,546 [wrapper] ==== wrapper stdout END ====
[2026-01-08 05:27:13] 2026-01-08 10:27:12,575 [wrapper] ==== wrapper stderr END ====
[2026-01-08 05:27:13]  *** Error codes and diagnostics ***
[2026-01-08 05:27:13]     "exeErrorCode": 0,
[2026-01-08 05:27:13]     "exeErrorDiag": "",
[2026-01-08 05:27:13]     "pilotErrorCode": 0,
[2026-01-08 05:27:13]     "pilotErrorDiag": "",
[2026-01-08 05:27:13]  *** Listing of results directory ***
[2026-01-08 05:27:13] total 449464
[2026-01-08 05:27:13] -rwx------. 1 boincer umatlas     36322 Jan  7 15:56 runpilot2-wrapper.sh
[2026-01-08 05:27:13] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 15:59 queuedata.json
[2026-01-08 05:27:13] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 16:00 pilot3.tar.gz
[2026-01-08 05:27:13] -rw-r--r--. 1 boincer umatlas       100 Jan  7 23:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 05:27:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  7 23:21 run_atlas
[2026-01-08 05:27:13] -rw-r--r--. 1 boincer umatlas       105 Jan  7 23:21 job.xml
[2026-01-08 05:27:13] -rw-r--r--. 2 boincer umatlas 225933637 Jan  7 23:21 EVNT.47898824._000537.pool.root.1
[2026-01-08 05:27:13] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 23:21 start_atlas.sh
[2026-01-08 05:27:13] drwxrwx--x. 2 boincer umatlas      4096 Jan  7 23:21 shared
[2026-01-08 05:27:13] -rw-r--r--. 2 boincer umatlas    592402 Jan  7 23:21 input.tar.gz
[2026-01-08 05:27:13] -rw-r--r--. 1 boincer umatlas         0 Jan  7 23:21 boinc_lockfile
[2026-01-08 05:27:13] -rw-r--r--. 1 boincer umatlas      2518 Jan  7 23:21 pandaJob.out
[2026-01-08 05:27:13] -rw-------. 1 boincer umatlas        57 Jan  7 23:21 setup.sh.local
[2026-01-08 05:27:13] -rw-------. 1 boincer umatlas    989835 Jan  7 23:22 agis_schedconf.cvmfs.json
[2026-01-08 05:27:13] drwx------. 5 boincer umatlas      4096 Jan  7 23:22 pilot3
[2026-01-08 05:27:13] -rw-------. 1 boincer umatlas 224278881 Jan  8 05:24 HITS.47898826._012650.pool.root.1
[2026-01-08 05:27:13] -rw-r--r--. 1 boincer umatlas       531 Jan  8 05:25 boinc_task_state.xml
[2026-01-08 05:27:13] -rw-------. 1 boincer umatlas      1047 Jan  8 05:25 memory_monitor_summary.json
[2026-01-08 05:27:13] -rw-------. 1 boincer umatlas   1516240 Jan  8 05:26 agis_ddmendpoints.agis.ALL.json
[2026-01-08 05:27:13] -rw-------. 1 boincer umatlas    531406 Jan  8 05:26 log.47898826._012650.job.log.tgz.1
[2026-01-08 05:27:13] -rw-------. 1 boincer umatlas        95 Jan  8 05:26 pilot_heartbeat.json
[2026-01-08 05:27:13] -rw-------. 1 boincer umatlas      7839 Jan  8 05:26 heartbeat.json
[2026-01-08 05:27:13] -rw-r--r--. 1 boincer umatlas      6862 Jan  8 05:27 init_data.xml
[2026-01-08 05:27:13] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 05:27 boinc_mmap_file
[2026-01-08 05:27:13] -rw-r--r--. 1 boincer umatlas        28 Jan  8 05:27 wrapper_checkpoint.txt
[2026-01-08 05:27:13] -rw-------. 1 boincer umatlas      4824 Jan  8 05:27 pilotlog.txt
[2026-01-08 05:27:13] -rw-------. 1 boincer umatlas   2530560 Jan  8 05:27 log.47898826._012650.job.log.1
[2026-01-08 05:27:13] -rw-------. 1 boincer umatlas       357 Jan  8 05:27 output.list
[2026-01-08 05:27:13] -rw-r--r--. 1 boincer umatlas       620 Jan  8 05:27 runtime_log
[2026-01-08 05:27:13] -rw-------. 1 boincer umatlas   3082240 Jan  8 05:27 result.tar.gz
[2026-01-08 05:27:13] -rw-------. 1 boincer umatlas       658 Jan  8 05:27 HddNDmClpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdliKDmY3Qdcn.diag
[2026-01-08 05:27:13] -rw-r--r--. 1 boincer umatlas      9343 Jan  8 05:27 runtime_log.err
[2026-01-08 05:27:13] -rw-r--r--. 1 boincer umatlas     21527 Jan  8 05:27 stderr.txt
[2026-01-08 05:27:13] HITS file was successfully produced:
[2026-01-08 05:27:13] -rw-------. 1 boincer umatlas 224278881 Jan  8 05:24 shared/HITS.pool.root.1
[2026-01-08 05:27:13]  *** Contents of shared directory: ***
[2026-01-08 05:27:13] total 443276
[2026-01-08 05:27:13] -rw-r--r--. 2 boincer umatlas 225933637 Jan  7 23:21 ATLAS.root_0
[2026-01-08 05:27:13] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 23:21 start_atlas.sh
[2026-01-08 05:27:13] -rw-r--r--. 2 boincer umatlas    592402 Jan  7 23:21 input.tar.gz
[2026-01-08 05:27:13] -rw-------. 1 boincer umatlas 224278881 Jan  8 05:24 HITS.pool.root.1
[2026-01-08 05:27:13] -rw-------. 1 boincer umatlas   3082240 Jan  8 05:27 result.tar.gz
05:27:14 (1783901): run_atlas exited; CPU time 64335.600236
05:27:14 (1783901): called boinc_finish(0)

</stderr_txt>
]]>

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