Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:03:21 (4051351): wrapper (7.7.26015): starting
09:03:21 (4051351): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 09:03:21] Arguments: --nthreads 4
[2026-01-08 09:03:21] Threads: 4
[2026-01-08 09:03:21] Checking for CVMFS
[2026-01-08 09:03:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 09:03:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 09:03:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 09:03:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 09:03:21] 2.9.2.0 3912768 495 68976 154896 1 57 20779385 36864000 0 130560 0 356744 99.987 20657 16605 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-08 09:03:21] CVMFS is ok
[2026-01-08 09:03:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 09:03:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 09:03:21] Further information can be found at the LHC@home message board.
[2026-01-08 09:03:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 09:03:21] Checking for apptainer binary...
[2026-01-08 09:03:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 09:03:21] Running /usr/bin/apptainer --version
[2026-01-08 09:03:21] apptainer version 1.4.1-1.1
[2026-01-08 09:03:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 09:03:21] thA375a
[2026-01-08 09:03:21] apptainer works
[2026-01-08 09:03:21] Set ATHENA_PROC_NUMBER=4
[2026-01-08 09:03:21] Set ATHENA_CORE_NUMBER=4
[2026-01-08 09:03:21] Starting ATLAS job with PandaID=6962016223
[2026-01-08 09:03:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 10:44:41]  *** The last 200 lines of the pilot log: ***
[2026-01-08 10:44:41] 2026-01-08 09:43:37,486 | INFO     | update_server=False
[2026-01-08 10:44:41] 2026-01-08 09:43:37,486 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 10:44:41] 2026-01-08 09:43:37,487 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 10:44:41] 2026-01-08 09:43:37,487 | INFO     | aborting loop
[2026-01-08 10:44:41] 2026-01-08 09:43:38,234 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 10:44:41] 2026-01-08 09:43:38,379 | INFO     | all data control threads have been joined
[2026-01-08 10:44:41] 2026-01-08 09:43:38,492 | INFO     | [job] job monitor thread has finished
[2026-01-08 10:44:41] 2026-01-08 09:43:38,492 | INFO     | [job] retrieve thread has finished
[2026-01-08 10:44:41] 2026-01-08 09:43:38,492 | INFO     | all payload control threads have been joined
[2026-01-08 10:44:41] 2026-01-08 09:43:38,540 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 10:44:41] 2026-01-08 09:43:38,590 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 10:44:41] 2026-01-08 09:43:38,764 | INFO     | all job control threads have been joined
[2026-01-08 10:44:41] 2026-01-08 09:43:38,794 | INFO     | [payload] validate_post thread has finished
[2026-01-08 10:44:41] 2026-01-08 09:43:39,000 | INFO     | [payload] failed_post thread has finished
[2026-01-08 10:44:41] 2026-01-08 09:43:39,196 | INFO     | [data] copytool_in thread has finished
[2026-01-08 10:44:41] 2026-01-08 09:43:39,384 | INFO     | [data] control thread has finished
[2026-01-08 10:44:41] 2026-01-08 09:43:39,498 | INFO     | [payload] control thread has finished
[2026-01-08 10:44:41] 2026-01-08 09:43:39,765 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 10:44:41] 2026-01-08 09:43:39,769 | INFO     | [job] control thread has finished
[2026-01-08 10:44:41] 2026-01-08 09:43:39,903 | INFO     | [job] validate thread has finished
[2026-01-08 10:44:41] 2026-01-08 09:43:40,240 | INFO     | [data] copytool_out thread has finished
[2026-01-08 10:44:41] 2026-01-08 09:43:40,491 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 10:44:41] 2026-01-08 09:43:40,767 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 10:44:41] 2026-01-08 09:43:41,496 | INFO     | [job] queue monitor thread has finished
[2026-01-08 10:44:41] 2026-01-08 09:43:44,775 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 10:44:41] 2026-01-08 09:43:47,539 | INFO     | job.realtimelogging is not enabled
[2026-01-08 10:44:41] 2026-01-08 09:43:48,545 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 10:44:41] 2026-01-08 09:44:07,447 | INFO     | PID=4055129 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 10:44:41] 2026-01-08 09:44:07,448 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 10:44:41] 2026-01-08 09:44:07,448 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 10:44:41] 2026-01-08 09:44:07,448 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 10:44:41] 2026-01-08 09:44:36,288 | INFO     | [monitor] cgroup control has ended
[2026-01-08 10:44:41] 2026-01-08 09:44:36,410 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139798285895488)>', '<ExcThread(monitor, started 139797259597568)>']
[2026-01-08 10:44:41] 2026-01-08 09:44:36,592 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 10:44:41] 2026-01-08 09:44:36,593 | INFO     | [monitor] control thread has ended
[2026-01-08 10:44:41] 2026-01-08 09:44:41,436 | INFO     | all workflow threads have been joined
[2026-01-08 10:44:41] 2026-01-08 09:44:41,437 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 10:44:41] 2026-01-08 09:44:41,437 | INFO     | traces error code: 0
[2026-01-08 10:44:41] 2026-01-08 09:44:41,437 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 10:44:41] 2026-01-08 09:44:41,518 [wrapper] ==== pilot stdout END ====
[2026-01-08 10:44:41] 2026-01-08 09:44:41,522 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 10:44:41] 2026-01-08 09:44:41,526 [wrapper] pilotpid: 4055129
[2026-01-08 10:44:41] 2026-01-08 09:44:41,530 [wrapper] Pilot exit status: 0
[2026-01-08 10:44:41] 2026-01-08 09:44:41,542 [wrapper] pandaids: 6962016223
[2026-01-08 10:44:41] 2026-01-08 09:44:41,566 [wrapper] cleanup supervisor_pilot 4074139 4055130
[2026-01-08 10:44:41] 2026-01-08 09:44:41,570 [wrapper] Test setup, not cleaning
[2026-01-08 10:44:41] 2026-01-08 09:44:41,574 [wrapper] apfmon messages muted
[2026-01-08 10:44:41] 2026-01-08 09:44:41,577 [wrapper] ==== wrapper stdout END ====
[2026-01-08 10:44:41] 2026-01-08 09:44:41,581 [wrapper] ==== wrapper stderr END ====
[2026-01-08 10:44:41]  *** Error codes and diagnostics ***
[2026-01-08 10:44:41]     "exeErrorCode": 0,
[2026-01-08 10:44:41]     "exeErrorDiag": "",
[2026-01-08 10:44:41]     "pilotErrorCode": 0,
[2026-01-08 10:44:41]     "pilotErrorDiag": "",
[2026-01-08 10:44:41]  *** Listing of results directory ***
[2026-01-08 10:44:41] total 439884
[2026-01-08 10:44:41] -rw-r--r-- 1 boinc boinc    579449 Jan  7 16:25 pilot3.tar.gz
[2026-01-08 10:44:41] -rwx------ 1 boinc boinc     36322 Jan  7 16:28 runpilot2-wrapper.sh
[2026-01-08 10:44:41] -rw-r--r-- 1 boinc boinc      5112 Jan  7 16:29 queuedata.json
[2026-01-08 10:44:41] -rw-r--r-- 1 boinc boinc       100 Jan  8 09:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 10:44:41] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 09:03 run_atlas
[2026-01-08 10:44:41] -rw-r--r-- 1 boinc boinc       105 Jan  8 09:03 job.xml
[2026-01-08 10:44:41] -rw-r--r-- 2 boinc boinc 224351730 Jan  8 09:03 EVNT.47898824._000378.pool.root.1
[2026-01-08 10:44:41] -rw-r--r-- 2 boinc boinc    592391 Jan  8 09:03 input.tar.gz
[2026-01-08 10:44:41] -rw-r--r-- 2 boinc boinc     15847 Jan  8 09:03 start_atlas.sh
[2026-01-08 10:44:41] drwxrwx--x 2 boinc boinc      4096 Jan  8 09:03 shared
[2026-01-08 10:44:41] -rw-r--r-- 1 boinc boinc         0 Jan  8 09:03 boinc_setup_complete
[2026-01-08 10:44:41] -rw-r--r-- 1 boinc boinc      6378 Jan  8 09:03 init_data.xml
[2026-01-08 10:44:41] -rw-r--r-- 1 boinc boinc         0 Jan  8 09:03 boinc_lockfile
[2026-01-08 10:44:41] -rw-r--r-- 1 boinc boinc      2516 Jan  8 09:03 pandaJob.out
[2026-01-08 10:44:41] -rw------- 1 boinc boinc    989819 Jan  8 09:03 agis_schedconf.cvmfs.json
[2026-01-08 10:44:41] -rw------- 1 boinc boinc   1516240 Jan  8 09:03 agis_ddmendpoints.agis.ALL.json
[2026-01-08 10:44:41] drwx------ 5 boinc boinc      4096 Jan  8 09:03 pilot3
[2026-01-08 10:44:41] -rw------- 1 boinc boinc 219876217 Jan  8 10:43 HITS.47898826._009016.pool.root.1
[2026-01-08 10:44:41] -rw-r--r-- 1 boinc boinc       529 Jan  8 10:43 boinc_task_state.xml
[2026-01-08 10:44:41] -rw------- 1 boinc boinc      1016 Jan  8 10:43 memory_monitor_summary.json
[2026-01-08 10:44:41] -rw------- 1 boinc boinc    283347 Jan  8 10:43 log.47898826._009016.job.log.tgz.1
[2026-01-08 10:44:41] -rw------- 1 boinc boinc      7751 Jan  8 10:43 heartbeat.json
[2026-01-08 10:44:41] -rw------- 1 boinc boinc        95 Jan  8 10:44 pilot_heartbeat.json
[2026-01-08 10:44:41] -rw-r--r-- 1 boinc boinc        27 Jan  8 10:44 wrapper_checkpoint.txt
[2026-01-08 10:44:41] -rw-r--r-- 1 boinc boinc      8192 Jan  8 10:44 boinc_mmap_file
[2026-01-08 10:44:41] -rw------- 1 boinc boinc      4824 Jan  8 10:44 pilotlog.txt
[2026-01-08 10:44:41] -rw------- 1 boinc boinc    871650 Jan  8 10:44 log.47898826._009016.job.log.1
[2026-01-08 10:44:41] -rw------- 1 boinc boinc       357 Jan  8 10:44 output.list
[2026-01-08 10:44:41] -rw-r--r-- 1 boinc boinc       620 Jan  8 10:44 runtime_log
[2026-01-08 10:44:41] -rw------- 1 boinc boinc   1177600 Jan  8 10:44 result.tar.gz
[2026-01-08 10:44:41] -rw-r--r-- 1 boinc boinc      8902 Jan  8 10:44 runtime_log.err
[2026-01-08 10:44:41] -rw------- 1 boinc boinc       660 Jan  8 10:44 3ohLDm3dkx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmn3cKDmVdch2n.diag
[2026-01-08 10:44:41] -rw-r--r-- 1 boinc boinc      7508 Jan  8 10:44 stderr.txt
[2026-01-08 10:44:41] HITS file was successfully produced:
[2026-01-08 10:44:41] -rw------- 1 boinc boinc 219876217 Jan  8 10:43 shared/HITS.pool.root.1
[2026-01-08 10:44:41]  *** Contents of shared directory: ***
[2026-01-08 10:44:41] total 435576
[2026-01-08 10:44:41] -rw-r--r-- 2 boinc boinc 224351730 Jan  8 09:03 ATLAS.root_0
[2026-01-08 10:44:41] -rw-r--r-- 2 boinc boinc    592391 Jan  8 09:03 input.tar.gz
[2026-01-08 10:44:41] -rw-r--r-- 2 boinc boinc     15847 Jan  8 09:03 start_atlas.sh
[2026-01-08 10:44:41] -rw------- 1 boinc boinc 219876217 Jan  8 10:43 HITS.pool.root.1
[2026-01-08 10:44:41] -rw------- 1 boinc boinc   1177600 Jan  8 10:44 result.tar.gz
10:44:43 (4051351): run_atlas exited; CPU time 22938.893579
10:44:43 (4051351): called boinc_finish(0)

</stderr_txt>
]]>

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