Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
06:00:17 (2671530): wrapper (7.7.26015): starting
06:00:17 (2671530): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 06:00:17] Arguments: --nthreads 12
[2026-01-08 06:00:17] Threads: 12
[2026-01-08 06:00:17] Checking for CVMFS
[2026-01-08 06:00:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 06:00:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 06:00:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 06:00:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 06:00:18] 2.13.0.0 2599851 183 56616 154891 0 57 4928031 6144000 0 130560 0 211059 99.992 9610 840 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-08 06:00:18] CVMFS is ok
[2026-01-08 06:00:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 06:00:18] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-08 06:00:18] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-08 06:00:18] Further information can be found at the LHC@home message board.
[2026-01-08 06:00:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 06:00:18] Checking for apptainer binary...
[2026-01-08 06:00:18] apptainer is not installed, using version from CVMFS
[2026-01-08 06:00:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 06:00:18] Debian-bookworm-latest-amd64-base
[2026-01-08 06:00:18] apptainer works
[2026-01-08 06:00:18] Set ATHENA_PROC_NUMBER=12
[2026-01-08 06:00:18] Set ATHENA_CORE_NUMBER=12
[2026-01-08 06:00:18] Starting ATLAS job with PandaID=6962322711
[2026-01-08 06:00:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 07:01:36]  *** The last 200 lines of the pilot log: ***
[2026-01-08 07:01:36]  status=None
[2026-01-08 07:01:36]  status_code=0
[2026-01-08 07:01:36]  storage_token=
[2026-01-08 07:01:36]  surl=/var/lib/boinc-client/slots/21/PanDA_Pilot-6962322711/log.47898826._015546.job.log.tgz.1
[2026-01-08 07:01:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/18/log.47898826._015546.job.log.tgz.1
[2026-01-08 07:01:36]  workdir=None
[2026-01-08 07:01:36] ]
[2026-01-08 07:01:36] 2026-01-08 06:00:47,823 | INFO     | transferring file log.47898826._015546.job.log.tgz.1 from /var/lib/boinc-client/slots/21/PanDA_Pilot-6962322711/log.47898826._015546.job.log.tgz.1 to /var/lib/boin
[2026-01-08 07:01:36] 2026-01-08 06:00:47,823 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/21/PanDA_Pilot-6962322711/log.47898826._015546.job.log.tgz.1 /var/lib/boinc-client/slots/21/log.4789
[2026-01-08 07:01:36] 2026-01-08 06:00:47,848 | INFO     | adding to output.list: log.47898826._015546.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/18/log.47898826._015546.job.log.tg
[2026-01-08 07:01:36] 2026-01-08 06:00:47,848 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-08 07:01:36] 2026-01-08 06:00:47,848 | INFO     | summary of transferred files:
[2026-01-08 07:01:36] 2026-01-08 06:00:47,849 | INFO     |  -- lfn=log.47898826._015546.job.log.tgz.1, status_code=0, status=transferred
[2026-01-08 07:01:36] 2026-01-08 06:00:47,849 | INFO     | stage-out finished correctly
[2026-01-08 07:01:36] 2026-01-08 06:00:48,139 | INFO     | time since job start (3625s) is within the limit (174528.0s)
[2026-01-08 07:01:36] 2026-01-08 06:00:49,539 | WARNING  | process 2682156 can no longer be monitored (due to stat problems) - aborting
[2026-01-08 07:01:36] 2026-01-08 06:00:49,540 | INFO     | using path: /var/lib/boinc-client/slots/21/PanDA_Pilot-6962322711/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 07:01:36] 2026-01-08 06:00:49,583 | INFO     | number of running child processes to parent process 2682156: 1
[2026-01-08 07:01:36] 2026-01-08 06:00:49,583 | INFO     | maximum number of monitored processes: 6
[2026-01-08 07:01:36] 2026-01-08 06:00:50,145 | INFO     | time since job start (3627s) is within the limit (174528.0s)
[2026-01-08 07:01:36] 2026-01-08 06:00:50,897 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-08 07:01:36] 2026-01-08 06:00:51,721 | INFO     | job 6962322711 has state=finished
[2026-01-08 07:01:36] 2026-01-08 06:00:51,721 | INFO     | preparing for final server update for job 6962322711 in state='finished'
[2026-01-08 07:01:36] 2026-01-08 06:00:51,721 | INFO     | this job has now completed (state=finished)
[2026-01-08 07:01:36] 2026-01-08 06:00:51,721 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-08 07:01:36] 2026-01-08 06:00:51,721 | INFO     | log transfer has been attempted: DONE
[2026-01-08 07:01:36] 2026-01-08 06:00:51,721 | INFO     | job 6962322711 has finished - writing final server update
[2026-01-08 07:01:36] 2026-01-08 06:00:51,722 | INFO     | total number of processed events: 400 (read)
[2026-01-08 07:01:36] 2026-01-08 06:00:51,723 | INFO     | executing command: lscpu
[2026-01-08 07:01:36] 2026-01-08 06:00:51,740 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 07:01:36] 2026-01-08 06:00:52,086 | INFO     | monitor loop #270: job 0:6962322711 is in state 'finished'
[2026-01-08 07:01:36] 2026-01-08 06:00:52,086 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 07:01:36] 2026-01-08 06:00:52,150 | INFO     | time since job start (3629s) is within the limit (174528.0s)
[2026-01-08 07:01:36] 2026-01-08 06:00:53,207 | INFO     | PID=2675394 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 07:01:36] 2026-01-08 06:00:54,207 | INFO     | time since job start (3631s) is within the limit (174528.0s)
[2026-01-08 07:01:36] 2026-01-08 06:00:54,589 | INFO     | monitor loop #271: job 0:6962322711 is in state 'finished'
[2026-01-08 07:01:36] 2026-01-08 06:00:54,589 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 07:01:36] 2026-01-08 06:00:56,213 | INFO     | time since job start (3633s) is within the limit (174528.0s)
[2026-01-08 07:01:36] 2026-01-08 06:00:56,589 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 07:01:36] 2026-01-08 06:00:56,590 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3947.8306875000003
[2026-01-08 07:01:36] 2026-01-08 06:00:56,592 | INFO     | using path: /var/lib/boinc-client/slots/21/PanDA_Pilot-6962322711/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 07:01:36] 2026-01-08 06:00:56,592 | INFO     | extracted standard info from prmon json
[2026-01-08 07:01:36] 2026-01-08 06:00:56,592 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 07:01:36] 2026-01-08 06:00:56,592 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 07:01:36] 2026-01-08 06:00:56,592 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 07:01:36] 2026-01-08 06:00:56,592 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 07:01:36] 2026-01-08 06:00:56,593 | INFO     | fitting pss+swap vs Time
[2026-01-08 07:01:36] 2026-01-08 06:00:56,593 | INFO     | sum of square deviations: 46147842.0
[2026-01-08 07:01:36] 2026-01-08 06:00:56,593 | INFO     | sum of deviations: -1590383033.0000002
[2026-01-08 07:01:36] 2026-01-08 06:00:56,593 | INFO     | mean x: 1767850334.0
[2026-01-08 07:01:36] 2026-01-08 06:00:56,593 | INFO     | mean y: 2769525.7924528304
[2026-01-08 07:01:36] 2026-01-08 06:00:56,593 | INFO     | intersect: 60927810746.07277
[2026-01-08 07:01:36] 2026-01-08 06:00:56,593 | INFO     | chi2: 0.06064284781998745
[2026-01-08 07:01:36] 2026-01-08 06:00:56,594 | INFO     | current memory leak: -34.46 B/s (using 53 data points, chi2=0.06)
[2026-01-08 07:01:36] 2026-01-08 06:00:56,594 | INFO     | could have reported an average CPU frequency of 3997 MHz (5 samples)
[2026-01-08 07:01:36] 2026-01-08 06:00:56,594 | INFO     | ..............................
[2026-01-08 07:01:36] 2026-01-08 06:00:56,594 | INFO     | . Timing measurements:
[2026-01-08 07:01:36] 2026-01-08 06:00:56,594 | INFO     | . get job = 0 s
[2026-01-08 07:01:36] 2026-01-08 06:00:56,594 | INFO     | . initial setup = 1 s
[2026-01-08 07:01:36] 2026-01-08 06:00:56,594 | INFO     | . payload setup = 2 s
[2026-01-08 07:01:36] 2026-01-08 06:00:56,594 | INFO     | . stage-in = 0 s
[2026-01-08 07:01:36] 2026-01-08 06:00:56,594 | INFO     | . payload execution = 3603 s
[2026-01-08 07:01:36] 2026-01-08 06:00:56,594 | INFO     | . stage-out = 0 s
[2026-01-08 07:01:36] 2026-01-08 06:00:56,594 | INFO     | . log creation = 0 s
[2026-01-08 07:01:36] 2026-01-08 06:00:56,594 | INFO     | ..............................
[2026-01-08 07:01:36] 2026-01-08 06:00:56,648 | INFO     | 
[2026-01-08 07:01:36] 2026-01-08 06:00:56,648 | INFO     | job summary report
[2026-01-08 07:01:36] 2026-01-08 06:00:56,648 | INFO     | --------------------------------------------------
[2026-01-08 07:01:36] 2026-01-08 06:00:56,648 | INFO     | PanDA job id: 6962322711
[2026-01-08 07:01:36] 2026-01-08 06:00:56,648 | INFO     | task id: 47898826
[2026-01-08 07:01:36] 2026-01-08 06:00:56,648 | INFO     | errors: (none)
[2026-01-08 07:01:36] 2026-01-08 06:00:56,648 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 07:01:36] 2026-01-08 06:00:56,648 | INFO     | pilot state: finished 
[2026-01-08 07:01:36] 2026-01-08 06:00:56,648 | INFO     | transexitcode: 0
[2026-01-08 07:01:36] 2026-01-08 06:00:56,648 | INFO     | exeerrorcode: 0
[2026-01-08 07:01:36] 2026-01-08 06:00:56,648 | INFO     | exeerrordiag: 
[2026-01-08 07:01:36] 2026-01-08 06:00:56,649 | INFO     | exitcode: 0
[2026-01-08 07:01:36] 2026-01-08 06:00:56,649 | INFO     | exitmsg: OK
[2026-01-08 07:01:36] 2026-01-08 06:00:56,649 | INFO     | cpuconsumptiontime: 39865 s
[2026-01-08 07:01:36] 2026-01-08 06:00:56,649 | INFO     | nevents: 400
[2026-01-08 07:01:36] 2026-01-08 06:00:56,649 | INFO     | neventsw: 0
[2026-01-08 07:01:36] 2026-01-08 06:00:56,649 | INFO     | pid: 2682156
[2026-01-08 07:01:36] 2026-01-08 06:00:56,649 | INFO     | pgrp: 2682156
[2026-01-08 07:01:36] 2026-01-08 06:00:56,649 | INFO     | corecount: 12
[2026-01-08 07:01:36] 2026-01-08 06:00:56,649 | INFO     | event service: False
[2026-01-08 07:01:36] 2026-01-08 06:00:56,649 | INFO     | sizes: {0: 2283977, 2: 2284239, 11: 2284267, 3609: 2310031, 3610: 2319045, 3614: 2319101, 3619: 2319455}
[2026-01-08 07:01:36] 2026-01-08 06:00:56,649 | INFO     | --------------------------------------------------
[2026-01-08 07:01:36] 2026-01-08 06:00:56,649 | INFO     | 
[2026-01-08 07:01:36] 2026-01-08 06:00:56,649 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/21
[2026-01-08 07:01:36] 2026-01-08 06:00:56,661 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 07:01:36] 2026-01-08 06:00:56,662 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 07:01:36] 2026-01-08 06:00:56,662 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 07:01:36] 2026-01-08 06:00:56,662 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 07:01:36] 2026-01-08 06:00:56,662 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 07:01:36] 2026-01-08 06:00:56,662 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 07:01:36] 2026-01-08 06:00:56,662 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 07:01:36] 2026-01-08 06:00:56,662 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 07:01:36] 2026-01-08 06:00:56,662 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 07:01:36] 2026-01-08 06:00:56,662 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 07:01:36] 2026-01-08 06:00:56,662 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 07:01:36] 2026-01-08 06:00:56,662 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 07:01:36] 2026-01-08 06:00:56,662 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 07:01:36] 2026-01-08 06:00:56,662 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 07:01:36] 2026-01-08 06:00:56,662 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 07:01:36] 2026-01-08 06:00:56,662 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 07:01:36] 2026-01-08 06:00:56,662 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 07:01:36] 2026-01-08 06:00:56,662 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 07:01:36] 2026-01-08 06:00:56,662 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 07:01:36] 2026-01-08 06:00:56,662 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 07:01:36] 2026-01-08 06:00:56,662 | INFO     | job 6962322711 has completed (purged errors)
[2026-01-08 07:01:36] 2026-01-08 06:00:56,662 | INFO     | overall cleanup function is called
[2026-01-08 07:01:36] 2026-01-08 06:00:57,669 | INFO     | --- collectZombieJob: --- 10, [2682156]
[2026-01-08 07:01:36] 2026-01-08 06:00:57,669 | INFO     | zombie collector waiting for pid 2682156
[2026-01-08 07:01:36] 2026-01-08 06:00:57,669 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 07:01:36] 2026-01-08 06:00:57,669 | INFO     | collected zombie processes
[2026-01-08 07:01:36] 2026-01-08 06:00:57,669 | INFO     | will attempt to kill all subprocesses of pid=2682156
[2026-01-08 07:01:36] 2026-01-08 06:00:57,734 | INFO     | process IDs to be killed: [2682156] (in reverse order)
[2026-01-08 07:01:36] 2026-01-08 06:00:57,764 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 07:01:36] 2026-01-08 06:00:57,764 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 07:01:36] 2026-01-08 06:00:57,765 | INFO     | did not find any defunct processes belonging to 2682156
[2026-01-08 07:01:36] 2026-01-08 06:00:57,767 | INFO     | did not find any defunct processes belonging to 2682156
[2026-01-08 07:01:36] 2026-01-08 06:00:57,767 | INFO     | ready for new job
[2026-01-08 07:01:36] 2026-01-08 06:00:57,767 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 07:01:36] 2026-01-08 06:00:57,768 | INFO     | ***************************************
[2026-01-08 07:01:36] 2026-01-08 06:00:57,768 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 07:01:36] 2026-01-08 06:00:57,768 | INFO     | ***************************************
[2026-01-08 07:01:36] 2026-01-08 06:00:57,768 | INFO     | 
[2026-01-08 07:01:36] 2026-01-08 06:00:57,769 | INFO     | architecture information:
[2026-01-08 07:01:36] 2026-01-08 06:00:57,769 | INFO     | executing command: cat /etc/os-release
[2026-01-08 07:01:36] 2026-01-08 06:00:57,779 | INFO     | cat /etc/os-release:
[2026-01-08 07:01:36] NAME="CentOS Linux"
[2026-01-08 07:01:36] VERSION="7 (Core)"
[2026-01-08 07:01:36] ID="centos"
[2026-01-08 07:01:36] ID_LIKE="rhel fedora"
[2026-01-08 07:01:36] VERSION_ID="7"
[2026-01-08 07:01:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 07:01:36] ANSI_COLOR="0;31"
[2026-01-08 07:01:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 07:01:36] HOME_URL="https://www.centos.org/"
[2026-01-08 07:01:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 07:01:36] 
[2026-01-08 07:01:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 07:01:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 07:01:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 07:01:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 07:01:36] 
[2026-01-08 07:01:36] 2026-01-08 06:00:57,779 | INFO     | ***************************************
[2026-01-08 07:01:36] 2026-01-08 06:00:58,282 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/21
[2026-01-08 07:01:36] 2026-01-08 06:00:58,296 | INFO     | sufficient remaining disk space (711530119168 B)
[2026-01-08 07:01:36] 2026-01-08 06:00:58,296 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 07:01:36] 2026-01-08 06:00:58,296 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 07:01:36] 2026-01-08 06:00:58,296 | INFO     | update_server=False
[2026-01-08 07:01:36] 2026-01-08 06:00:58,296 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 07:01:36] 2026-01-08 06:00:58,296 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 07:01:36] 2026-01-08 06:00:58,296 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 07:01:36] 2026-01-08 06:00:58,296 | INFO     | aborting loop
[2026-01-08 07:01:36] 2026-01-08 06:00:58,375 | INFO     | all data control threads have been joined
[2026-01-08 07:01:36] 2026-01-08 06:00:58,401 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 07:01:36] 2026-01-08 06:00:59,297 | INFO     | [job] retrieve thread has finished
[2026-01-08 07:01:36] 2026-01-08 06:00:59,302 | INFO     | [job] queue monitor thread has finished
[2026-01-08 07:01:36] 2026-01-08 06:00:59,302 | INFO     | [job] job monitor thread has finished
[2026-01-08 07:01:36] 2026-01-08 06:00:59,307 | INFO     | all payload control threads have been joined
[2026-01-08 07:01:36] 2026-01-08 06:00:59,380 | INFO     | [data] control thread has finished
[2026-01-08 07:01:36] 2026-01-08 06:00:59,481 | INFO     | [job] validate thread has finished
[2026-01-08 07:01:36] 2026-01-08 06:00:59,482 | INFO     | [payload] failed_post thread has finished
[2026-01-08 07:01:36] 2026-01-08 06:00:59,603 | INFO     | all job control threads have been joined
[2026-01-08 07:01:36] 2026-01-08 06:00:59,670 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 07:01:36] 2026-01-08 06:00:59,673 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 07:01:36] 2026-01-08 06:00:59,859 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 07:01:36] 2026-01-08 06:01:00,312 | INFO     | [payload] control thread has finished
[2026-01-08 07:01:36] 2026-01-08 06:01:00,407 | INFO     | [data] copytool_out thread has finished
[2026-01-08 07:01:36] 2026-01-08 06:01:00,608 | INFO     | [job] control thread has finished
[2026-01-08 07:01:36] 2026-01-08 06:01:00,703 | INFO     | [payload] validate_post thread has finished
[2026-01-08 07:01:36] 2026-01-08 06:01:00,736 | INFO     | [data] copytool_in thread has finished
[2026-01-08 07:01:36] 2026-01-08 06:01:01,472 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 07:01:36] 2026-01-08 06:01:05,477 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 07:01:36] 2026-01-08 06:01:08,697 | INFO     | job.realtimelogging is not enabled
[2026-01-08 07:01:36] 2026-01-08 06:01:09,703 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 07:01:36] 2026-01-08 06:01:29,357 | INFO     | PID=2675394 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 07:01:36] 2026-01-08 06:01:29,371 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 07:01:36] 2026-01-08 06:01:29,371 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 07:01:36] 2026-01-08 06:01:29,371 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 07:01:36] 2026-01-08 06:01:29,611 | INFO     | [monitor] cgroup control has ended
[2026-01-08 07:01:36] 2026-01-08 06:01:31,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139907212728128)>', '<ExcThread(monitor, started 139906546398976)>']
[2026-01-08 07:01:36] 2026-01-08 06:01:32,386 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 07:01:36] 2026-01-08 06:01:32,386 | INFO     | [monitor] control thread has ended
[2026-01-08 07:01:36] 2026-01-08 06:01:36,620 | INFO     | all workflow threads have been joined
[2026-01-08 07:01:36] 2026-01-08 06:01:36,624 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 07:01:36] 2026-01-08 06:01:36,625 | INFO     | traces error code: 0
[2026-01-08 07:01:36] 2026-01-08 06:01:36,625 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 07:01:36] 2026-01-08 06:01:36,694 [wrapper] ==== pilot stdout END ====
[2026-01-08 07:01:36] 2026-01-08 06:01:36,695 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 07:01:36] 2026-01-08 06:01:36,696 [wrapper] pilotpid: 2675394
[2026-01-08 07:01:36] 2026-01-08 06:01:36,698 [wrapper] Pilot exit status: 0
[2026-01-08 07:01:36] 2026-01-08 06:01:36,703 [wrapper] pandaids: 6962322711
[2026-01-08 07:01:36] 2026-01-08 06:01:36,717 [wrapper] cleanup supervisor_pilot 2692629 2675395
[2026-01-08 07:01:36] 2026-01-08 06:01:36,718 [wrapper] Test setup, not cleaning
[2026-01-08 07:01:36] 2026-01-08 06:01:36,719 [wrapper] apfmon messages muted
[2026-01-08 07:01:36] 2026-01-08 06:01:36,721 [wrapper] ==== wrapper stdout END ====
[2026-01-08 07:01:36] 2026-01-08 06:01:36,722 [wrapper] ==== wrapper stderr END ====
[2026-01-08 07:01:36]  *** Error codes and diagnostics ***
[2026-01-08 07:01:36]     "exeErrorCode": 0,
[2026-01-08 07:01:36]     "exeErrorDiag": "",
[2026-01-08 07:01:36]     "pilotErrorCode": 0,
[2026-01-08 07:01:36]     "pilotErrorDiag": "",
[2026-01-08 07:01:36]  *** Listing of results directory ***
[2026-01-08 07:01:36] total 440508
[2026-01-08 07:01:36] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 07:01:36] -rwx------ 1 boinc boinc     36322 Jan  7 22:09 runpilot2-wrapper.sh
[2026-01-08 07:01:36] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:16 queuedata.json
[2026-01-08 07:01:36] -rw-r--r-- 1 boinc boinc       100 Jan  8 06:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 07:01:36] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 06:00 run_atlas
[2026-01-08 07:01:36] -rw-r--r-- 1 boinc boinc       105 Jan  8 06:00 job.xml
[2026-01-08 07:01:36] -rw-r--r-- 1 boinc boinc      6726 Jan  8 06:00 init_data.xml
[2026-01-08 07:01:36] -rw-r--r-- 2 boinc boinc 223297319 Jan  8 06:00 EVNT.47898824._000726.pool.root.1
[2026-01-08 07:01:36] -rw-r--r-- 2 boinc boinc     15847 Jan  8 06:00 start_atlas.sh
[2026-01-08 07:01:36] drwxrwx--x 2 boinc boinc      4096 Jan  8 06:00 shared
[2026-01-08 07:01:36] -rw-r--r-- 2 boinc boinc    592402 Jan  8 06:00 input.tar.gz
[2026-01-08 07:01:36] -rw-r--r-- 1 boinc boinc         0 Jan  8 06:00 boinc_lockfile
[2026-01-08 07:01:36] -rw-r--r-- 1 boinc boinc      2519 Jan  8 06:00 pandaJob.out
[2026-01-08 07:01:36] -rw------- 1 boinc boinc    989835 Jan  8 06:00 agis_schedconf.cvmfs.json
[2026-01-08 07:01:36] -rw------- 1 boinc boinc   1516240 Jan  8 06:00 agis_ddmendpoints.agis.ALL.json
[2026-01-08 07:01:36] drwx------ 5 boinc boinc      4096 Jan  8 06:00 pilot3
[2026-01-08 07:01:36] -rw-r--r-- 1 boinc boinc       529 Jan  8 07:00 boinc_task_state.xml
[2026-01-08 07:01:36] -rw------- 1 boinc boinc 222072429 Jan  8 07:00 HITS.47898826._015546.pool.root.1
[2026-01-08 07:01:36] -rw------- 1 boinc boinc      1012 Jan  8 07:00 memory_monitor_summary.json
[2026-01-08 07:01:36] -rw------- 1 boinc boinc    359784 Jan  8 07:00 log.47898826._015546.job.log.tgz.1
[2026-01-08 07:01:36] -rw------- 1 boinc boinc      7772 Jan  8 07:00 heartbeat.json
[2026-01-08 07:01:36] -rw------- 1 boinc boinc        95 Jan  8 07:01 pilot_heartbeat.json
[2026-01-08 07:01:36] -rw-r--r-- 1 boinc boinc      8192 Jan  8 07:01 boinc_mmap_file
[2026-01-08 07:01:36] -rw-r--r-- 1 boinc boinc        27 Jan  8 07:01 wrapper_checkpoint.txt
[2026-01-08 07:01:36] -rw------- 1 boinc boinc      4829 Jan  8 07:01 pilotlog.txt
[2026-01-08 07:01:36] -rw------- 1 boinc boinc    539342 Jan  8 07:01 log.47898826._015546.job.log.1
[2026-01-08 07:01:36] -rw------- 1 boinc boinc       357 Jan  8 07:01 output.list
[2026-01-08 07:01:36] -rw-r--r-- 1 boinc boinc       620 Jan  8 07:01 runtime_log
[2026-01-08 07:01:36] -rw------- 1 boinc boinc    921600 Jan  8 07:01 result.tar.gz
[2026-01-08 07:01:36] -rw-r--r-- 1 boinc boinc      9148 Jan  8 07:01 runtime_log.err
[2026-01-08 07:01:36] -rw------- 1 boinc boinc       707 Jan  8 07:01 pEULDmcxpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmM5dKDmOvzrzn.diag
[2026-01-08 07:01:36] -rw-r--r-- 1 boinc boinc     22330 Jan  8 07:01 stderr.txt
[2026-01-08 07:01:36] HITS file was successfully produced:
[2026-01-08 07:01:36] -rw------- 1 boinc boinc 222072429 Jan  8 07:00 shared/HITS.pool.root.1
[2026-01-08 07:01:36]  *** Contents of shared directory: ***
[2026-01-08 07:01:36] total 436436
[2026-01-08 07:01:36] -rw-r--r-- 2 boinc boinc 223297319 Jan  8 06:00 ATLAS.root_0
[2026-01-08 07:01:36] -rw-r--r-- 2 boinc boinc     15847 Jan  8 06:00 start_atlas.sh
[2026-01-08 07:01:36] -rw-r--r-- 2 boinc boinc    592402 Jan  8 06:00 input.tar.gz
[2026-01-08 07:01:36] -rw------- 1 boinc boinc 222072429 Jan  8 07:00 HITS.pool.root.1
[2026-01-08 07:01:36] -rw------- 1 boinc boinc    921600 Jan  8 07:01 result.tar.gz
07:01:38 (2671530): run_atlas exited; CPU time 39888.942331
07:01:38 (2671530): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN