Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:04:38 (4122722): wrapper (7.7.26015): starting
23:04:38 (4122722): wrapper: running run_atlas (--nthreads 10)
[2026-01-07 23:04:38] Arguments: --nthreads 10
[2026-01-07 23:04:38] Threads: 10
[2026-01-07 23:04:38] Checking for CVMFS
[2026-01-07 23:04:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 23:04:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 23:04:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 23:04:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 23:04:39] 2.13.3.0 22787 91416 139648 154889 2 202 35486967 40960001 27276 16776704 0 1098087178 99.710 816949905 49748 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-07 23:04:39] CVMFS is ok
[2026-01-07 23:04:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 23:04:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 23:04:40] Further information can be found at the LHC@home message board.
[2026-01-07 23:04:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 23:04:40] Checking for apptainer binary...
[2026-01-07 23:04:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 23:04:40] Running /usr/bin/apptainer --version
[2026-01-07 23:04:40] apptainer version 1.4.5-2.el9
[2026-01-07 23:04:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 23:04:40] c8-6-11.aglt2.org
[2026-01-07 23:04:40] apptainer works
[2026-01-07 23:04:40] Set ATHENA_PROC_NUMBER=10
[2026-01-07 23:04:40] Set ATHENA_CORE_NUMBER=10
[2026-01-07 23:04:40] Starting ATLAS job with PandaID=6962323827
[2026-01-07 23:04:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 00:25:03]  *** The last 200 lines of the pilot log: ***
[2026-01-08 00:25:03] 2026-01-08 05:23:50,603 | INFO     | monitor loop #326: job 0:6962323827 is in state 'finished'
[2026-01-08 00:25:03] 2026-01-08 05:23:50,603 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 00:25:03] 2026-01-08 05:23:51,914 | INFO     | time since job start (4683s) is within the limit (174528.0s)
[2026-01-08 00:25:03] 2026-01-08 05:23:53,108 | INFO     | monitor loop #327: job 0:6962323827 is in state 'finished'
[2026-01-08 00:25:03] 2026-01-08 05:23:53,108 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 00:25:03] 2026-01-08 05:23:53,921 | INFO     | time since job start (4685s) is within the limit (174528.0s)
[2026-01-08 00:25:03] 2026-01-08 05:23:55,612 | INFO     | monitor loop #328: job 0:6962323827 is in state 'finished'
[2026-01-08 00:25:03] 2026-01-08 05:23:55,612 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 00:25:03] 2026-01-08 05:23:55,942 | INFO     | time since job start (4687s) is within the limit (174528.0s)
[2026-01-08 00:25:03] 2026-01-08 05:23:57,789 | INFO     | PID=4129360 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 00:25:03] 2026-01-08 05:23:57,789 | INFO     | .. there are 23 such processes running
[2026-01-08 00:25:03] 2026-01-08 05:23:58,126 | INFO     | monitor loop #329: job 0:6962323827 is in state 'finished'
[2026-01-08 00:25:03] 2026-01-08 05:23:58,126 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 00:25:03] 2026-01-08 05:23:58,790 | INFO     | time since job start (4690s) is within the limit (174528.0s)
[2026-01-08 00:25:03] 2026-01-08 05:24:00,634 | INFO     | monitor loop #330: job 0:6962323827 is in state 'finished'
[2026-01-08 00:25:03] 2026-01-08 05:24:00,635 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 00:25:03] 2026-01-08 05:24:00,797 | INFO     | time since job start (4692s) is within the limit (174528.0s)
[2026-01-08 00:25:03] 2026-01-08 05:24:02,804 | INFO     | time since job start (4694s) is within the limit (174528.0s)
[2026-01-08 00:25:03] 2026-01-08 05:24:03,139 | INFO     | monitor loop #331: job 0:6962323827 is in state 'finished'
[2026-01-08 00:25:03] 2026-01-08 05:24:03,139 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 00:25:03] 2026-01-08 05:24:04,813 | INFO     | time since job start (4696s) is within the limit (174528.0s)
[2026-01-08 00:25:03] 2026-01-08 05:24:05,658 | INFO     | monitor loop #332: job 0:6962323827 is in state 'finished'
[2026-01-08 00:25:03] 2026-01-08 05:24:05,663 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 00:25:03] 2026-01-08 05:24:06,820 | INFO     | time since job start (4698s) is within the limit (174528.0s)
[2026-01-08 00:25:03] 2026-01-08 05:24:08,168 | INFO     | monitor loop #333: job 0:6962323827 is in state 'finished'
[2026-01-08 00:25:03] 2026-01-08 05:24:08,168 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 00:25:03] 2026-01-08 05:24:08,827 | INFO     | time since job start (4700s) is within the limit (174528.0s)
[2026-01-08 00:25:03] 2026-01-08 05:24:10,673 | INFO     | monitor loop #334: job 0:6962323827 is in state 'finished'
[2026-01-08 00:25:03] 2026-01-08 05:24:10,678 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 00:25:03] 2026-01-08 05:24:10,836 | INFO     | time since job start (4702s) is within the limit (174528.0s)
[2026-01-08 00:25:03] 2026-01-08 05:24:12,843 | INFO     | time since job start (4704s) is within the limit (174528.0s)
[2026-01-08 00:25:03] 2026-01-08 05:24:13,183 | INFO     | monitor loop #335: job 0:6962323827 is in state 'finished'
[2026-01-08 00:25:03] 2026-01-08 05:24:13,183 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 00:25:03] 2026-01-08 05:24:14,849 | INFO     | time since job start (4706s) is within the limit (174528.0s)
[2026-01-08 00:25:03] 2026-01-08 05:24:15,688 | INFO     | monitor loop #336: job 0:6962323827 is in state 'finished'
[2026-01-08 00:25:03] 2026-01-08 05:24:15,694 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 00:25:03] 2026-01-08 05:24:16,404 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-08 00:25:03] 2026-01-08 05:24:16,421 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3787.0067109375004
[2026-01-08 00:25:03] 2026-01-08 05:24:16,468 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6962323827/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 00:25:03] 2026-01-08 05:24:16,468 | INFO     | extracted standard info from prmon json
[2026-01-08 00:25:03] 2026-01-08 05:24:16,468 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 00:25:03] 2026-01-08 05:24:16,468 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 00:25:03] 2026-01-08 05:24:16,469 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 00:25:03] 2026-01-08 05:24:16,469 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 00:25:03] 2026-01-08 05:24:16,474 | INFO     | fitting pss+swap vs Time
[2026-01-08 00:25:03] 2026-01-08 05:24:16,474 | INFO     | sum of square deviations: 97469896.05882339
[2026-01-08 00:25:03] 2026-01-08 05:24:16,474 | INFO     | sum of deviations: 1695470400.2058825
[2026-01-08 00:25:03] 2026-01-08 05:24:16,474 | INFO     | mean x: 1767847639.6176472
[2026-01-08 00:25:03] 2026-01-08 05:24:16,474 | INFO     | mean y: 2582266.661764706
[2026-01-08 00:25:03] 2026-01-08 05:24:16,475 | INFO     | intersect: -30748792939.860023
[2026-01-08 00:25:03] 2026-01-08 05:24:16,475 | INFO     | chi2: 0.03713417401366899
[2026-01-08 00:25:03] 2026-01-08 05:24:16,475 | INFO     | current memory leak: 17.39 B/s (using 68 data points, chi2=0.04)
[2026-01-08 00:25:03] 2026-01-08 05:24:16,475 | INFO     | could have reported an average CPU frequency of 3777 MHz (6 samples)
[2026-01-08 00:25:03] 2026-01-08 05:24:16,475 | INFO     | ..............................
[2026-01-08 00:25:03] 2026-01-08 05:24:16,475 | INFO     | . Timing measurements:
[2026-01-08 00:25:03] 2026-01-08 05:24:16,475 | INFO     | . get job = 0 s
[2026-01-08 00:25:03] 2026-01-08 05:24:16,475 | INFO     | . initial setup = 6 s
[2026-01-08 00:25:03] 2026-01-08 05:24:16,475 | INFO     | . payload setup = 44 s
[2026-01-08 00:25:03] 2026-01-08 05:24:16,475 | INFO     | . stage-in = 0 s
[2026-01-08 00:25:03] 2026-01-08 05:24:16,475 | INFO     | . payload execution = 4562 s
[2026-01-08 00:25:03] 2026-01-08 05:24:16,475 | INFO     | . stage-out = 1 s
[2026-01-08 00:25:03] 2026-01-08 05:24:16,475 | INFO     | . log creation = 0 s
[2026-01-08 00:25:03] 2026-01-08 05:24:16,475 | INFO     | ..............................
[2026-01-08 00:25:03] 2026-01-08 05:24:16,718 | INFO     | 
[2026-01-08 00:25:03] 2026-01-08 05:24:16,718 | INFO     | job summary report
[2026-01-08 00:25:03] 2026-01-08 05:24:16,718 | INFO     | --------------------------------------------------
[2026-01-08 00:25:03] 2026-01-08 05:24:16,718 | INFO     | PanDA job id: 6962323827
[2026-01-08 00:25:03] 2026-01-08 05:24:16,718 | INFO     | task id: 47898826
[2026-01-08 00:25:03] 2026-01-08 05:24:16,718 | INFO     | errors: (none)
[2026-01-08 00:25:03] 2026-01-08 05:24:16,718 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 00:25:03] 2026-01-08 05:24:16,718 | INFO     | pilot state: finished 
[2026-01-08 00:25:03] 2026-01-08 05:24:16,718 | INFO     | transexitcode: 0
[2026-01-08 00:25:03] 2026-01-08 05:24:16,718 | INFO     | exeerrorcode: 0
[2026-01-08 00:25:03] 2026-01-08 05:24:16,718 | INFO     | exeerrordiag: 
[2026-01-08 00:25:03] 2026-01-08 05:24:16,718 | INFO     | exitcode: 0
[2026-01-08 00:25:03] 2026-01-08 05:24:16,718 | INFO     | exitmsg: OK
[2026-01-08 00:25:03] 2026-01-08 05:24:16,719 | INFO     | cpuconsumptiontime: 33138 s
[2026-01-08 00:25:03] 2026-01-08 05:24:16,719 | INFO     | nevents: 400
[2026-01-08 00:25:03] 2026-01-08 05:24:16,719 | INFO     | neventsw: 0
[2026-01-08 00:25:03] 2026-01-08 05:24:16,719 | INFO     | pid: 4141304
[2026-01-08 00:25:03] 2026-01-08 05:24:16,719 | INFO     | pgrp: 4141304
[2026-01-08 00:25:03] 2026-01-08 05:24:16,719 | INFO     | corecount: 10
[2026-01-08 00:25:03] 2026-01-08 05:24:16,719 | INFO     | event service: False
[2026-01-08 00:25:03] 2026-01-08 05:24:16,719 | INFO     | sizes: {0: 2283742, 1: 2283997, 12: 2283997, 23: 2284025, 31: 2284315, 34: 2284343, 4611: 2310738, 4612: 2310737, 4614: 2319791, 4617: 2319875, 4646: 2320069}
[2026-01-08 00:25:03] 2026-01-08 05:24:16,719 | INFO     | --------------------------------------------------
[2026-01-08 00:25:03] 2026-01-08 05:24:16,719 | INFO     | 
[2026-01-08 00:25:03] 2026-01-08 05:24:16,719 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-08 00:25:03] 2026-01-08 05:24:16,742 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 00:25:03] 2026-01-08 05:24:16,742 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 00:25:03] 2026-01-08 05:24:16,742 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 00:25:03] 2026-01-08 05:24:16,742 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 00:25:03] 2026-01-08 05:24:16,743 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 00:25:03] 2026-01-08 05:24:16,743 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 00:25:03] 2026-01-08 05:24:16,743 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 00:25:03] 2026-01-08 05:24:16,743 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 00:25:03] 2026-01-08 05:24:16,743 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 00:25:03] 2026-01-08 05:24:16,743 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 00:25:03] 2026-01-08 05:24:16,743 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 00:25:03] 2026-01-08 05:24:16,743 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 00:25:03] 2026-01-08 05:24:16,743 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 00:25:03] 2026-01-08 05:24:16,743 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 00:25:03] 2026-01-08 05:24:16,743 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 00:25:03] 2026-01-08 05:24:16,743 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 00:25:03] 2026-01-08 05:24:16,743 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 00:25:03] 2026-01-08 05:24:16,743 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 00:25:03] 2026-01-08 05:24:16,743 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 00:25:03] 2026-01-08 05:24:16,743 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 00:25:03] 2026-01-08 05:24:16,743 | INFO     | job 6962323827 has completed (purged errors)
[2026-01-08 00:25:03] 2026-01-08 05:24:16,743 | INFO     | overall cleanup function is called
[2026-01-08 00:25:03] 2026-01-08 05:24:17,773 | INFO     | --- collectZombieJob: --- 10, [4141304]
[2026-01-08 00:25:03] 2026-01-08 05:24:17,773 | INFO     | zombie collector waiting for pid 4141304
[2026-01-08 00:25:03] 2026-01-08 05:24:17,773 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 00:25:03] 2026-01-08 05:24:17,773 | INFO     | collected zombie processes
[2026-01-08 00:25:03] 2026-01-08 05:24:17,773 | INFO     | will attempt to kill all subprocesses of pid=4141304
[2026-01-08 00:25:03] 2026-01-08 05:24:19,513 | INFO     | process IDs to be killed: [4141304] (in reverse order)
[2026-01-08 00:25:03] 2026-01-08 05:24:19,679 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 00:25:03] 2026-01-08 05:24:19,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 00:25:03] 2026-01-08 05:24:19,758 | INFO     | did not find any defunct processes belonging to 4141304
[2026-01-08 00:25:03] 2026-01-08 05:24:19,945 | INFO     | did not find any defunct processes belonging to 4141304
[2026-01-08 00:25:03] 2026-01-08 05:24:19,946 | INFO     | ready for new job
[2026-01-08 00:25:03] 2026-01-08 05:24:19,946 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 00:25:03] 2026-01-08 05:24:19,947 | INFO     | ***************************************
[2026-01-08 00:25:03] 2026-01-08 05:24:19,948 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 00:25:03] 2026-01-08 05:24:19,948 | INFO     | ***************************************
[2026-01-08 00:25:03] 2026-01-08 05:24:19,948 | INFO     | 
[2026-01-08 00:25:03] 2026-01-08 05:24:19,953 | INFO     | architecture information:
[2026-01-08 00:25:03] 2026-01-08 05:24:19,953 | INFO     | executing command: cat /etc/os-release
[2026-01-08 00:25:03] 2026-01-08 05:24:20,006 | INFO     | cat /etc/os-release:
[2026-01-08 00:25:03] NAME="CentOS Linux"
[2026-01-08 00:25:03] VERSION="7 (Core)"
[2026-01-08 00:25:03] ID="centos"
[2026-01-08 00:25:03] ID_LIKE="rhel fedora"
[2026-01-08 00:25:03] VERSION_ID="7"
[2026-01-08 00:25:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 00:25:03] ANSI_COLOR="0;31"
[2026-01-08 00:25:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 00:25:03] HOME_URL="https://www.centos.org/"
[2026-01-08 00:25:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 00:25:03] 
[2026-01-08 00:25:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 00:25:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 00:25:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 00:25:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 00:25:03] 
[2026-01-08 00:25:03] 2026-01-08 05:24:20,006 | INFO     | ***************************************
[2026-01-08 00:25:03] 2026-01-08 05:24:20,510 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-08 00:25:03] 2026-01-08 05:24:20,536 | INFO     | sufficient remaining disk space (172563103744 B)
[2026-01-08 00:25:03] 2026-01-08 05:24:20,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 00:25:03] 2026-01-08 05:24:20,537 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 00:25:03] 2026-01-08 05:24:20,537 | INFO     | update_server=False
[2026-01-08 00:25:03] 2026-01-08 05:24:20,537 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 00:25:03] 2026-01-08 05:24:20,540 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 00:25:03] 2026-01-08 05:24:20,584 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 00:25:03] 2026-01-08 05:24:20,711 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 00:25:03] 2026-01-08 05:24:20,713 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 00:25:03] 2026-01-08 05:24:20,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 00:25:03] 2026-01-08 05:24:20,714 | INFO     | will abort loop
[2026-01-08 00:25:03] 2026-01-08 05:24:20,857 | INFO     | all job control threads have been joined
[2026-01-08 00:25:03] 2026-01-08 05:24:21,052 | INFO     | all payload control threads have been joined
[2026-01-08 00:25:03] 2026-01-08 05:24:21,452 | INFO     | all data control threads have been joined
[2026-01-08 00:25:03] 2026-01-08 05:24:21,543 | INFO     | [job] retrieve thread has finished
[2026-01-08 00:25:03] 2026-01-08 05:24:21,583 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 00:25:03] 2026-01-08 05:24:21,607 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 00:25:03] 2026-01-08 05:24:21,695 | INFO     | [job] validate thread has finished
[2026-01-08 00:25:03] 2026-01-08 05:24:21,699 | INFO     | [data] copytool_in thread has finished
[2026-01-08 00:25:03] 2026-01-08 05:24:21,721 | INFO     | [job] job monitor thread has finished
[2026-01-08 00:25:03] 2026-01-08 05:24:21,840 | INFO     | [payload] failed_post thread has finished
[2026-01-08 00:25:03] 2026-01-08 05:24:21,863 | INFO     | [job] control thread has finished
[2026-01-08 00:25:03] 2026-01-08 05:24:22,044 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 00:25:03] 2026-01-08 05:24:22,058 | INFO     | [payload] control thread has finished
[2026-01-08 00:25:03] 2026-01-08 05:24:22,120 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 00:25:03] 2026-01-08 05:24:22,447 | INFO     | [payload] validate_post thread has finished
[2026-01-08 00:25:03] 2026-01-08 05:24:22,458 | INFO     | [data] control thread has finished
[2026-01-08 00:25:03] 2026-01-08 05:24:22,480 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 00:25:03] 2026-01-08 05:24:22,547 | INFO     | [data] copytool_out thread has finished
[2026-01-08 00:25:03] 2026-01-08 05:24:22,589 | INFO     | [job] queue monitor thread has finished
[2026-01-08 00:25:03] 2026-01-08 05:24:24,593 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 00:25:03] 2026-01-08 05:24:49,121 | INFO     | PID=4129360 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 00:25:03] 2026-01-08 05:24:49,121 | INFO     | .. there are 23 such processes running
[2026-01-08 00:25:03] 2026-01-08 05:24:49,122 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 00:25:03] 2026-01-08 05:24:49,122 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 00:25:03] 2026-01-08 05:24:49,122 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 00:25:03] 2026-01-08 05:24:55,664 | INFO     | [monitor] cgroup control has ended
[2026-01-08 00:25:03] 2026-01-08 05:24:56,849 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139920574846784)>', '<ExcThread(monitor, started 139920085604096)>']
[2026-01-08 00:25:03] 2026-01-08 05:24:57,170 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 00:25:03] 2026-01-08 05:24:57,170 | INFO     | [monitor] control thread has ended
[2026-01-08 00:25:03] 2026-01-08 05:25:01,875 | INFO     | all workflow threads have been joined
[2026-01-08 00:25:03] 2026-01-08 05:25:01,875 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 00:25:03] 2026-01-08 05:25:01,875 | INFO     | traces error code: 0
[2026-01-08 00:25:03] 2026-01-08 05:25:01,875 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 00:25:03] 2026-01-08 05:25:02,187 [wrapper] ==== pilot stdout END ====
[2026-01-08 00:25:03] 2026-01-08 05:25:02,202 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 00:25:03] 2026-01-08 05:25:02,226 [wrapper] pilotpid: 4129360
[2026-01-08 00:25:03] 2026-01-08 05:25:02,249 [wrapper] Pilot exit status: 0
[2026-01-08 00:25:03] 2026-01-08 05:25:02,326 [wrapper] pandaids: 6962323827
[2026-01-08 00:25:03] 2026-01-08 05:25:03,460 [wrapper] cleanup supervisor_pilot  488753 4129361
[2026-01-08 00:25:03] 2026-01-08 05:25:03,497 [wrapper] Test setup, not cleaning
[2026-01-08 00:25:03] 2026-01-08 05:25:03,536 [wrapper] apfmon messages muted
[2026-01-08 00:25:03] 2026-01-08 05:25:03,562 [wrapper] ==== wrapper stdout END ====
[2026-01-08 00:25:03] 2026-01-08 05:25:03,581 [wrapper] ==== wrapper stderr END ====
[2026-01-08 00:25:03]  *** Error codes and diagnostics ***
[2026-01-08 00:25:04]     "exeErrorCode": 0,
[2026-01-08 00:25:04]     "exeErrorDiag": "",
[2026-01-08 00:25:04]     "pilotErrorCode": 0,
[2026-01-08 00:25:04]     "pilotErrorDiag": "",
[2026-01-08 00:25:04]  *** Listing of results directory ***
[2026-01-08 00:25:04] total 443320
[2026-01-08 00:25:04] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 16:00 pilot3.tar.gz
[2026-01-08 00:25:04] -rwx------. 1 boincer umatlas     36322 Jan  7 16:09 runpilot2-wrapper.sh
[2026-01-08 00:25:04] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 16:16 queuedata.json
[2026-01-08 00:25:04] -rw-r--r--. 1 boincer umatlas       100 Jan  7 23:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 00:25:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  7 23:04 run_atlas
[2026-01-08 00:25:04] -rw-r--r--. 1 boincer umatlas       105 Jan  7 23:04 job.xml
[2026-01-08 00:25:04] -rw-r--r--. 2 boincer umatlas 224925686 Jan  7 23:04 EVNT.47898824._000762.pool.root.1
[2026-01-08 00:25:04] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 23:04 start_atlas.sh
[2026-01-08 00:25:04] drwxrwx--x. 2 boincer umatlas      4096 Jan  7 23:04 shared
[2026-01-08 00:25:04] -rw-r--r--. 2 boincer umatlas    592404 Jan  7 23:04 input.tar.gz
[2026-01-08 00:25:04] -rw-r--r--. 1 boincer umatlas         0 Jan  7 23:04 boinc_lockfile
[2026-01-08 00:25:04] -rw-r--r--. 1 boincer umatlas      2519 Jan  7 23:04 pandaJob.out
[2026-01-08 00:25:04] -rw-------. 1 boincer umatlas        57 Jan  7 23:04 setup.sh.local
[2026-01-08 00:25:04] -rw-------. 1 boincer umatlas    989835 Jan  7 23:05 agis_schedconf.cvmfs.json
[2026-01-08 00:25:04] -rw-------. 1 boincer umatlas   1516240 Jan  7 23:05 agis_ddmendpoints.agis.ALL.json
[2026-01-08 00:25:04] drwx------. 5 boincer umatlas      4096 Jan  7 23:05 pilot3
[2026-01-08 00:25:04] -rw-r--r--. 1 boincer umatlas      7170 Jan  8 00:18 init_data.xml
[2026-01-08 00:25:04] -rw-------. 1 boincer umatlas 223081188 Jan  8 00:22 HITS.47898826._016452.pool.root.1
[2026-01-08 00:25:04] -rw-r--r--. 1 boincer umatlas       529 Jan  8 00:23 boinc_task_state.xml
[2026-01-08 00:25:04] -rw-------. 1 boincer umatlas      1048 Jan  8 00:23 memory_monitor_summary.json
[2026-01-08 00:25:04] -rw-------. 1 boincer umatlas    356483 Jan  8 00:23 log.47898826._016452.job.log.tgz.1
[2026-01-08 00:25:04] -rw-------. 1 boincer umatlas        95 Jan  8 00:24 pilot_heartbeat.json
[2026-01-08 00:25:04] -rw-------. 1 boincer umatlas      7805 Jan  8 00:24 heartbeat.json
[2026-01-08 00:25:04] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 00:25 boinc_mmap_file
[2026-01-08 00:25:04] -rw-r--r--. 1 boincer umatlas        27 Jan  8 00:25 wrapper_checkpoint.txt
[2026-01-08 00:25:04] -rw-------. 1 boincer umatlas      5011 Jan  8 00:25 pilotlog.txt
[2026-01-08 00:25:04] -rw-------. 1 boincer umatlas    663454 Jan  8 00:25 log.47898826._016452.job.log.1
[2026-01-08 00:25:04] -rw-------. 1 boincer umatlas       357 Jan  8 00:25 output.list
[2026-01-08 00:25:04] -rw-r--r--. 1 boincer umatlas       620 Jan  8 00:25 runtime_log
[2026-01-08 00:25:04] -rw-------. 1 boincer umatlas   1034240 Jan  8 00:25 result.tar.gz
[2026-01-08 00:25:04] -rw-------. 1 boincer umatlas       656 Jan  8 00:25 TyKODmzxpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmv7dKDmdbqJOn.diag
[2026-01-08 00:25:04] -rw-r--r--. 1 boincer umatlas      9339 Jan  8 00:25 runtime_log.err
[2026-01-08 00:25:04] -rw-r--r--. 1 boincer umatlas     22433 Jan  8 00:25 stderr.txt
[2026-01-08 00:25:04] HITS file was successfully produced:
[2026-01-08 00:25:04] -rw-------. 1 boincer umatlas 223081188 Jan  8 00:22 shared/HITS.pool.root.1
[2026-01-08 00:25:04]  *** Contents of shared directory: ***
[2026-01-08 00:25:04] total 439124
[2026-01-08 00:25:04] -rw-r--r--. 2 boincer umatlas 224925686 Jan  7 23:04 ATLAS.root_0
[2026-01-08 00:25:04] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 23:04 start_atlas.sh
[2026-01-08 00:25:04] -rw-r--r--. 2 boincer umatlas    592404 Jan  7 23:04 input.tar.gz
[2026-01-08 00:25:04] -rw-------. 1 boincer umatlas 223081188 Jan  8 00:22 HITS.pool.root.1
[2026-01-08 00:25:04] -rw-------. 1 boincer umatlas   1034240 Jan  8 00:25 result.tar.gz
00:25:05 (4122722): run_atlas exited; CPU time 33267.782107
00:25:05 (4122722): called boinc_finish(0)

</stderr_txt>
]]>

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