Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:00:33 (7643): wrapper (7.7.26015): starting
23:00:33 (7643): wrapper: running run_atlas (--nthreads 12)
[2026-01-07 23:00:33] Arguments: --nthreads 12
[2026-01-07 23:00:33] Threads: 12
[2026-01-07 23:00:33] Checking for CVMFS
[2026-01-07 23:00:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 23:00:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 23:00:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 23:00:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 23:00:33] 2.11.2.0 2914 349094 95440 154889 0 59 15191183 20275201 1 130560 1 147880107 99.955 20422451 16005 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-07 23:00:33] CVMFS is ok
[2026-01-07 23:00:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 23:00:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 23:00:33] Further information can be found at the LHC@home message board.
[2026-01-07 23:00:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 23:00:33] Checking for apptainer binary...
[2026-01-07 23:00:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 23:00:33] Running /usr/bin/apptainer --version
[2026-01-07 23:00:33] apptainer version 1.3.2-1.el7
[2026-01-07 23:00:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 23:00:35] c-205-5.aglt2.org
[2026-01-07 23:00:35] apptainer works
[2026-01-07 23:00:35] Set ATHENA_PROC_NUMBER=12
[2026-01-07 23:00:35] Set ATHENA_CORE_NUMBER=12
[2026-01-07 23:00:35] Starting ATLAS job with PandaID=6962315511
[2026-01-07 23:00:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 00:44:04]  *** The last 200 lines of the pilot log: ***
[2026-01-08 00:44:04] 2026-01-08 05:43:07,721 | INFO     | mean y: 2640365.52
[2026-01-08 00:44:04] 2026-01-08 05:43:07,721 | INFO     | intersect: -79149363247.16705
[2026-01-08 00:44:04] 2026-01-08 05:43:07,721 | INFO     | chi2: 1.4275462992129462
[2026-01-08 00:44:04] 2026-01-08 05:43:07,721 | INFO     | sum of square deviations: 265828240.0
[2026-01-08 00:44:04] 2026-01-08 05:43:07,722 | INFO     | sum of deviations: 13165260827.999998
[2026-01-08 00:44:04] 2026-01-08 05:43:07,722 | INFO     | mean x: 1767847746.0
[2026-01-08 00:44:04] 2026-01-08 05:43:07,722 | INFO     | mean y: 2637891.8842105265
[2026-01-08 00:44:04] 2026-01-08 05:43:07,722 | INFO     | intersect: -87550801427.73769
[2026-01-08 00:44:04] 2026-01-08 05:43:07,722 | INFO     | chi2: 1.4305638090759154
[2026-01-08 00:44:04] 2026-01-08 05:43:07,723 | INFO     | current chi2=1.4305638090759154 (change=-0.2113773728132586 %)
[2026-01-08 00:44:04] 2026-01-08 05:43:07,723 | INFO     | right removable region: 94
[2026-01-08 00:44:04] 2026-01-08 05:43:07,723 | INFO     | sum of square deviations: 265828240.0
[2026-01-08 00:44:04] 2026-01-08 05:43:07,723 | INFO     | sum of deviations: -1616213300.0
[2026-01-08 00:44:04] 2026-01-08 05:43:07,723 | INFO     | mean x: 1767848051.0
[2026-01-08 00:44:04] 2026-01-08 05:43:07,724 | INFO     | mean y: 2692634.2210526317
[2026-01-08 00:44:04] 2026-01-08 05:43:07,724 | INFO     | intersect: 10751059822.015991
[2026-01-08 00:44:04] 2026-01-08 05:43:07,724 | INFO     | chi2: 0.04987684207891345
[2026-01-08 00:44:04] 2026-01-08 05:43:07,724 | INFO     | current chi2=0.04987684207891345 (change=96.50611387480656 %)
[2026-01-08 00:44:04] 2026-01-08 05:43:07,724 | INFO     | sum of square deviations: 226022842.5
[2026-01-08 00:44:04] 2026-01-08 05:43:07,725 | INFO     | sum of deviations: -189330396.99999967
[2026-01-08 00:44:04] 2026-01-08 05:43:07,725 | INFO     | mean x: 1767848203.5
[2026-01-08 00:44:04] 2026-01-08 05:43:07,725 | INFO     | mean y: 2686916.888888889
[2026-01-08 00:44:04] 2026-01-08 05:43:07,725 | INFO     | intersect: 1483543446.7079544
[2026-01-08 00:44:04] 2026-01-08 05:43:07,725 | INFO     | chi2: 0.01966472286152076
[2026-01-08 00:44:04] 2026-01-08 05:43:07,725 | INFO     | current chi2=0.01966472286152076 (change=60.57344041467601 %)
[2026-01-08 00:44:04] 2026-01-08 05:43:07,726 | INFO     | sum of square deviations: 190403570.0
[2026-01-08 00:44:04] 2026-01-08 05:43:07,726 | INFO     | sum of deviations: 938148645.9999994
[2026-01-08 00:44:04] 2026-01-08 05:43:07,726 | INFO     | mean x: 1767848356.0
[2026-01-08 00:44:04] 2026-01-08 05:43:07,726 | INFO     | mean y: 2682309.7529411763
[2026-01-08 00:44:04] 2026-01-08 05:43:07,726 | INFO     | intersect: -8707787465.12956
[2026-01-08 00:44:04] 2026-01-08 05:43:07,726 | INFO     | chi2: 0.0006253180918328327
[2026-01-08 00:44:04] 2026-01-08 05:43:07,727 | INFO     | current chi2=0.0006253180918328327 (change=96.82010218889769 %)
[2026-01-08 00:44:04] 2026-01-08 05:43:07,727 | INFO     | sum of square deviations: 158737860.0
[2026-01-08 00:44:04] 2026-01-08 05:43:07,727 | INFO     | sum of deviations: 587012333.0
[2026-01-08 00:44:04] 2026-01-08 05:43:07,727 | INFO     | mean x: 1767848508.5
[2026-01-08 00:44:04] 2026-01-08 05:43:07,727 | INFO     | mean y: 2683994.125
[2026-01-08 00:44:04] 2026-01-08 05:43:07,727 | INFO     | intersect: -6534816746.814529
[2026-01-08 00:44:04] 2026-01-08 05:43:07,728 | INFO     | chi2: 0.0004068790697577722
[2026-01-08 00:44:04] 2026-01-08 05:43:07,728 | INFO     | current chi2=0.0004068790697577722 (change=34.932464761223656 %)
[2026-01-08 00:44:04] 2026-01-08 05:43:07,728 | INFO     | sum of square deviations: 130793150.0
[2026-01-08 00:44:04] 2026-01-08 05:43:07,728 | INFO     | sum of deviations: 374491687.99999994
[2026-01-08 00:44:04] 2026-01-08 05:43:07,728 | INFO     | mean x: 1767848661.0
[2026-01-08 00:44:04] 2026-01-08 05:43:07,729 | INFO     | mean y: 2685155.08
[2026-01-08 00:44:04] 2026-01-08 05:43:07,729 | INFO     | intersect: -5059083211.125949
[2026-01-08 00:44:04] 2026-01-08 05:43:07,729 | INFO     | chi2: 0.0003343549255157674
[2026-01-08 00:44:04] 2026-01-08 05:43:07,729 | INFO     | current chi2=0.0003343549255157674 (change=17.8244961789705 %)
[2026-01-08 00:44:04] 2026-01-08 05:43:07,729 | INFO     | left removable region: 50
[2026-01-08 00:44:04] 2026-01-08 05:43:07,729 | INFO     | sum of square deviations: 26400495.0
[2026-01-08 00:44:04] 2026-01-08 05:43:07,729 | INFO     | sum of deviations: -32428881.0
[2026-01-08 00:44:04] 2026-01-08 05:43:07,730 | INFO     | mean x: 1767849240.5
[2026-01-08 00:44:04] 2026-01-08 05:43:07,730 | INFO     | mean y: 2687988.772727273
[2026-01-08 00:44:04] 2026-01-08 05:43:07,730 | INFO     | intersect: 2174214418.338343
[2026-01-08 00:44:04] 2026-01-08 05:43:07,730 | INFO     | chi2: 3.7736132016980226e-06
[2026-01-08 00:44:04] 2026-01-08 05:43:07,730 | INFO     | current memory leak: -1.23 B/s (using 44 data points, chi2=0.00)
[2026-01-08 00:44:04] 2026-01-08 05:43:07,730 | INFO     | could have reported an average CPU frequency of 2133 MHz (7 samples)
[2026-01-08 00:44:04] 2026-01-08 05:43:07,731 | INFO     | ..............................
[2026-01-08 00:44:04] 2026-01-08 05:43:07,731 | INFO     | . Timing measurements:
[2026-01-08 00:44:04] 2026-01-08 05:43:07,731 | INFO     | . get job = 0 s
[2026-01-08 00:44:04] 2026-01-08 05:43:07,731 | INFO     | . initial setup = 2 s
[2026-01-08 00:44:04] 2026-01-08 05:43:07,731 | INFO     | . payload setup = 7 s
[2026-01-08 00:44:04] 2026-01-08 05:43:07,731 | INFO     | . stage-in = 0 s
[2026-01-08 00:44:04] 2026-01-08 05:43:07,731 | INFO     | . payload execution = 6103 s
[2026-01-08 00:44:04] 2026-01-08 05:43:07,731 | INFO     | . stage-out = 0 s
[2026-01-08 00:44:04] 2026-01-08 05:43:07,731 | INFO     | . log creation = 0 s
[2026-01-08 00:44:04] 2026-01-08 05:43:07,732 | INFO     | ..............................
[2026-01-08 00:44:04] 2026-01-08 05:43:07,811 | INFO     | 
[2026-01-08 00:44:04] 2026-01-08 05:43:07,811 | INFO     | job summary report
[2026-01-08 00:44:04] 2026-01-08 05:43:07,812 | INFO     | --------------------------------------------------
[2026-01-08 00:44:04] 2026-01-08 05:43:07,812 | INFO     | PanDA job id: 6962315511
[2026-01-08 00:44:04] 2026-01-08 05:43:07,812 | INFO     | task id: 47898826
[2026-01-08 00:44:04] 2026-01-08 05:43:07,812 | INFO     | errors: (none)
[2026-01-08 00:44:04] 2026-01-08 05:43:07,812 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 00:44:04] 2026-01-08 05:43:07,813 | INFO     | pilot state: finished 
[2026-01-08 00:44:04] 2026-01-08 05:43:07,813 | INFO     | transexitcode: 0
[2026-01-08 00:44:04] 2026-01-08 05:43:07,813 | INFO     | exeerrorcode: 0
[2026-01-08 00:44:04] 2026-01-08 05:43:07,813 | INFO     | exeerrordiag: 
[2026-01-08 00:44:04] 2026-01-08 05:43:07,813 | INFO     | exitcode: 0
[2026-01-08 00:44:04] 2026-01-08 05:43:07,813 | INFO     | exitmsg: OK
[2026-01-08 00:44:04] 2026-01-08 05:43:07,813 | INFO     | cpuconsumptiontime: 66342 s
[2026-01-08 00:44:04] 2026-01-08 05:43:07,814 | INFO     | nevents: 400
[2026-01-08 00:44:04] 2026-01-08 05:43:07,814 | INFO     | neventsw: 0
[2026-01-08 00:44:04] 2026-01-08 05:43:07,814 | INFO     | pid: 17755
[2026-01-08 00:44:04] 2026-01-08 05:43:07,814 | INFO     | pgrp: 17755
[2026-01-08 00:44:04] 2026-01-08 05:43:07,814 | INFO     | corecount: 12
[2026-01-08 00:44:04] 2026-01-08 05:43:07,814 | INFO     | event service: False
[2026-01-08 00:44:04] 2026-01-08 05:43:07,815 | INFO     | sizes: {0: 2283134, 1: 2283990, 6: 2284252, 12: 2284280, 6115: 2311055, 6116: 2320237, 6122: 2320375}
[2026-01-08 00:44:04] 2026-01-08 05:43:07,815 | INFO     | --------------------------------------------------
[2026-01-08 00:44:04] 2026-01-08 05:43:07,815 | INFO     | 
[2026-01-08 00:44:04] 2026-01-08 05:43:07,815 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 00:44:04] 2026-01-08 05:43:07,838 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 00:44:04] 2026-01-08 05:43:07,838 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 00:44:04] 2026-01-08 05:43:07,838 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 00:44:04] 2026-01-08 05:43:07,839 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 00:44:04] 2026-01-08 05:43:07,839 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 00:44:04] 2026-01-08 05:43:07,839 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 00:44:04] 2026-01-08 05:43:07,839 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 00:44:04] 2026-01-08 05:43:07,839 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 00:44:04] 2026-01-08 05:43:07,839 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 00:44:04] 2026-01-08 05:43:07,840 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 00:44:04] 2026-01-08 05:43:07,840 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 00:44:04] 2026-01-08 05:43:07,840 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 00:44:04] 2026-01-08 05:43:07,840 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 00:44:04] 2026-01-08 05:43:07,840 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 00:44:04] 2026-01-08 05:43:07,840 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 00:44:04] 2026-01-08 05:43:07,841 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 00:44:04] 2026-01-08 05:43:07,841 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 00:44:04] 2026-01-08 05:43:07,841 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 00:44:04] 2026-01-08 05:43:07,841 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 00:44:04] 2026-01-08 05:43:07,841 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 00:44:04] 2026-01-08 05:43:07,842 | INFO     | job 6962315511 has completed (purged errors)
[2026-01-08 00:44:04] 2026-01-08 05:43:07,842 | INFO     | overall cleanup function is called
[2026-01-08 00:44:04] 2026-01-08 05:43:08,850 | INFO     | --- collectZombieJob: --- 10, [17755]
[2026-01-08 00:44:04] 2026-01-08 05:43:08,850 | INFO     | zombie collector waiting for pid 17755
[2026-01-08 00:44:04] 2026-01-08 05:43:08,850 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 00:44:04] 2026-01-08 05:43:08,851 | INFO     | collected zombie processes
[2026-01-08 00:44:04] 2026-01-08 05:43:08,851 | INFO     | will attempt to kill all subprocesses of pid=17755
[2026-01-08 00:44:04] 2026-01-08 05:43:08,942 | INFO     | process IDs to be killed: [17755] (in reverse order)
[2026-01-08 00:44:04] 2026-01-08 05:43:08,991 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 00:44:04] 2026-01-08 05:43:08,991 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 00:44:04] 2026-01-08 05:43:08,995 | INFO     | did not find any defunct processes belonging to 17755
[2026-01-08 00:44:04] 2026-01-08 05:43:08,998 | INFO     | did not find any defunct processes belonging to 17755
[2026-01-08 00:44:04] 2026-01-08 05:43:08,998 | INFO     | ready for new job
[2026-01-08 00:44:04] 2026-01-08 05:43:08,998 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 00:44:04] 2026-01-08 05:43:08,999 | INFO     | ***************************************
[2026-01-08 00:44:04] 2026-01-08 05:43:09,000 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 00:44:04] 2026-01-08 05:43:09,000 | INFO     | ***************************************
[2026-01-08 00:44:04] 2026-01-08 05:43:09,000 | INFO     | 
[2026-01-08 00:44:04] 2026-01-08 05:43:09,000 | INFO     | architecture information:
[2026-01-08 00:44:04] 2026-01-08 05:43:09,001 | INFO     | executing command: cat /etc/os-release
[2026-01-08 00:44:04] 2026-01-08 05:43:09,015 | INFO     | cat /etc/os-release:
[2026-01-08 00:44:04] NAME="CentOS Linux"
[2026-01-08 00:44:04] VERSION="7 (Core)"
[2026-01-08 00:44:04] ID="centos"
[2026-01-08 00:44:04] ID_LIKE="rhel fedora"
[2026-01-08 00:44:04] VERSION_ID="7"
[2026-01-08 00:44:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 00:44:04] ANSI_COLOR="0;31"
[2026-01-08 00:44:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 00:44:04] HOME_URL="https://www.centos.org/"
[2026-01-08 00:44:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 00:44:04] 
[2026-01-08 00:44:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 00:44:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 00:44:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 00:44:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 00:44:04] 
[2026-01-08 00:44:04] 2026-01-08 05:43:09,015 | INFO     | ***************************************
[2026-01-08 00:44:04] 2026-01-08 05:43:09,518 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 00:44:04] 2026-01-08 05:43:09,534 | INFO     | sufficient remaining disk space (29318184960 B)
[2026-01-08 00:44:04] 2026-01-08 05:43:09,534 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 00:44:04] 2026-01-08 05:43:09,535 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 00:44:04] 2026-01-08 05:43:09,535 | INFO     | update_server=False
[2026-01-08 00:44:04] 2026-01-08 05:43:09,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 00:44:04] 2026-01-08 05:43:09,535 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 00:44:04] 2026-01-08 05:43:09,536 | INFO     | aborting loop
[2026-01-08 00:44:04] 2026-01-08 05:43:09,536 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 00:44:04] 2026-01-08 05:43:09,536 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 00:44:04] 2026-01-08 05:43:10,253 | INFO     | all data control threads have been joined
[2026-01-08 00:44:04] 2026-01-08 05:43:10,514 | INFO     | all payload control threads have been joined
[2026-01-08 00:44:04] 2026-01-08 05:43:10,541 | INFO     | [job] retrieve thread has finished
[2026-01-08 00:44:04] 2026-01-08 05:43:10,541 | INFO     | [job] job monitor thread has finished
[2026-01-08 00:44:04] 2026-01-08 05:43:10,542 | INFO     | [job] queue monitor thread has finished
[2026-01-08 00:44:04] 2026-01-08 05:43:10,572 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 00:44:04] 2026-01-08 05:43:10,858 | INFO     | all job control threads have been joined
[2026-01-08 00:44:04] 2026-01-08 05:43:10,871 | INFO     | [payload] failed_post thread has finished
[2026-01-08 00:44:04] 2026-01-08 05:43:11,170 | INFO     | [job] validate thread has finished
[2026-01-08 00:44:04] 2026-01-08 05:43:11,259 | INFO     | [data] control thread has finished
[2026-01-08 00:44:04] 2026-01-08 05:43:11,278 | INFO     | [payload] validate_post thread has finished
[2026-01-08 00:44:04] 2026-01-08 05:43:11,496 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 00:44:04] 2026-01-08 05:43:11,504 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 00:44:04] 2026-01-08 05:43:11,520 | INFO     | [payload] control thread has finished
[2026-01-08 00:44:04] 2026-01-08 05:43:11,539 | INFO     | [data] copytool_out thread has finished
[2026-01-08 00:44:04] 2026-01-08 05:43:11,863 | INFO     | [job] control thread has finished
[2026-01-08 00:44:04] 2026-01-08 05:43:11,961 | INFO     | [data] copytool_in thread has finished
[2026-01-08 00:44:04] 2026-01-08 05:43:12,243 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 00:44:04] 2026-01-08 05:43:16,249 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 00:44:04] 2026-01-08 05:43:20,457 | INFO     | job.realtimelogging is not enabled
[2026-01-08 00:44:04] 2026-01-08 05:43:21,463 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 00:44:04] 2026-01-08 05:43:39,134 | INFO     | PID=11328 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 00:44:04] 2026-01-08 05:43:39,134 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 00:44:04] 2026-01-08 05:43:39,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 00:44:04] 2026-01-08 05:43:39,135 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 00:44:04] 2026-01-08 05:43:59,457 | INFO     | [monitor] cgroup control has ended
[2026-01-08 00:44:04] 2026-01-08 05:43:59,468 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139855009363776)>', '<ExcThread(monitor, started 139853949802240)>']
[2026-01-08 00:44:04] 2026-01-08 05:44:00,234 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 00:44:04] 2026-01-08 05:44:00,235 | INFO     | [monitor] control thread has ended
[2026-01-08 00:44:04] 2026-01-08 05:44:04,472 | INFO     | all workflow threads have been joined
[2026-01-08 00:44:04] 2026-01-08 05:44:04,472 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 00:44:04] 2026-01-08 05:44:04,477 | INFO     | traces error code: 0
[2026-01-08 00:44:04] 2026-01-08 05:44:04,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 00:44:04] 2026-01-08 05:44:04,571 [wrapper] ==== pilot stdout END ====
[2026-01-08 00:44:04] 2026-01-08 05:44:04,575 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 00:44:04] 2026-01-08 05:44:04,578 [wrapper] pilotpid: 11328
[2026-01-08 00:44:04] 2026-01-08 05:44:04,582 [wrapper] Pilot exit status: 0
[2026-01-08 00:44:04] 2026-01-08 05:44:04,597 [wrapper] pandaids: 6962315511
[2026-01-08 00:44:04] 2026-01-08 05:44:04,643 [wrapper] cleanup supervisor_pilot 19384 11329
[2026-01-08 00:44:04] 2026-01-08 05:44:04,647 [wrapper] Test setup, not cleaning
[2026-01-08 00:44:04] 2026-01-08 05:44:04,651 [wrapper] apfmon messages muted
[2026-01-08 00:44:04] 2026-01-08 05:44:04,655 [wrapper] ==== wrapper stdout END ====
[2026-01-08 00:44:04] 2026-01-08 05:44:04,658 [wrapper] ==== wrapper stderr END ====
[2026-01-08 00:44:04]  *** Error codes and diagnostics ***
[2026-01-08 00:44:04]     "exeErrorCode": 0,
[2026-01-08 00:44:04]     "exeErrorDiag": "",
[2026-01-08 00:44:04]     "pilotErrorCode": 0,
[2026-01-08 00:44:04]     "pilotErrorDiag": "",
[2026-01-08 00:44:04]  *** Listing of results directory ***
[2026-01-08 00:44:04] total 438256
[2026-01-08 00:44:04] -rw-r--r-- 1 boincer umatlas    579449 Jan  7 15:55 pilot3.tar.gz
[2026-01-08 00:44:04] -rwx------ 1 boincer umatlas     36322 Jan  7 15:56 runpilot2-wrapper.sh
[2026-01-08 00:44:04] -rw-r--r-- 1 boincer umatlas      5112 Jan  7 15:56 queuedata.json
[2026-01-08 00:44:04] -rw-r--r-- 1 boincer umatlas       100 Jan  7 23:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 00:44:04] -rwxr-xr-x 1 boincer umatlas      7986 Jan  7 23:00 run_atlas
[2026-01-08 00:44:04] -rw-r--r-- 1 boincer umatlas       105 Jan  7 23:00 job.xml
[2026-01-08 00:44:04] -rw-r--r-- 2 boincer umatlas 221352567 Jan  7 23:00 EVNT.47898824._000469.pool.root.1
[2026-01-08 00:44:04] -rw-r--r-- 2 boincer umatlas     15847 Jan  7 23:00 start_atlas.sh
[2026-01-08 00:44:04] drwxrwx--x 2 boincer umatlas      4096 Jan  7 23:00 shared
[2026-01-08 00:44:04] -rw-r--r-- 2 boincer umatlas    592394 Jan  7 23:00 input.tar.gz
[2026-01-08 00:44:04] -rw-r--r-- 1 boincer umatlas         0 Jan  7 23:00 boinc_lockfile
[2026-01-08 00:44:04] -rw-r--r-- 1 boincer umatlas      2515 Jan  7 23:00 pandaJob.out
[2026-01-08 00:44:04] -rw------- 1 boincer umatlas        57 Jan  7 23:00 setup.sh.local
[2026-01-08 00:44:04] -rw------- 1 boincer umatlas    989835 Jan  7 23:00 agis_schedconf.cvmfs.json
[2026-01-08 00:44:04] -rw------- 1 boincer umatlas   1516240 Jan  7 23:00 agis_ddmendpoints.agis.ALL.json
[2026-01-08 00:44:04] drwx------ 5 boincer umatlas      4096 Jan  7 23:00 pilot3
[2026-01-08 00:44:04] -rw-r--r-- 1 boincer umatlas      5951 Jan  8 00:37 init_data.xml
[2026-01-08 00:44:04] -rw------- 1 boincer umatlas 220979900 Jan  8 00:42 HITS.47898826._012016.pool.root.1
[2026-01-08 00:44:04] -rw-r--r-- 1 boincer umatlas       529 Jan  8 00:42 boinc_task_state.xml
[2026-01-08 00:44:04] -rw------- 1 boincer umatlas      1045 Jan  8 00:42 memory_monitor_summary.json
[2026-01-08 00:44:04] -rw------- 1 boincer umatlas    390308 Jan  8 00:43 log.47898826._012016.job.log.tgz.1
[2026-01-08 00:44:04] -rw------- 1 boincer umatlas      7836 Jan  8 00:43 heartbeat.json
[2026-01-08 00:44:04] -rw------- 1 boincer umatlas        95 Jan  8 00:43 pilot_heartbeat.json
[2026-01-08 00:44:04] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 00:44 boinc_mmap_file
[2026-01-08 00:44:04] -rw-r--r-- 1 boincer umatlas        27 Jan  8 00:44 wrapper_checkpoint.txt
[2026-01-08 00:44:04] -rw------- 1 boincer umatlas      4818 Jan  8 00:44 pilotlog.txt
[2026-01-08 00:44:04] -rw------- 1 boincer umatlas    874953 Jan  8 00:44 log.47898826._012016.job.log.1
[2026-01-08 00:44:04] -rw------- 1 boincer umatlas       357 Jan  8 00:44 output.list
[2026-01-08 00:44:04] -rw-r--r-- 1 boincer umatlas       620 Jan  8 00:44 runtime_log
[2026-01-08 00:44:04] -rw------- 1 boincer umatlas   1280000 Jan  8 00:44 result.tar.gz
[2026-01-08 00:44:04] -rw-r--r-- 1 boincer umatlas      9339 Jan  8 00:44 runtime_log.err
[2026-01-08 00:44:04] -rw------- 1 boincer umatlas       658 Jan  8 00:44 RKnLDmkkpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9ZdKDm7KAsRo.diag
[2026-01-08 00:44:04] -rw-r--r-- 1 boincer umatlas     20842 Jan  8 00:44 stderr.txt
[2026-01-08 00:44:04] HITS file was successfully produced:
[2026-01-08 00:44:04] -rw------- 1 boincer umatlas 220979900 Jan  8 00:42 shared/HITS.pool.root.1
[2026-01-08 00:44:04]  *** Contents of shared directory: ***
[2026-01-08 00:44:04] total 433820
[2026-01-08 00:44:04] -rw-r--r-- 2 boincer umatlas 221352567 Jan  7 23:00 ATLAS.root_0
[2026-01-08 00:44:04] -rw-r--r-- 2 boincer umatlas     15847 Jan  7 23:00 start_atlas.sh
[2026-01-08 00:44:04] -rw-r--r-- 2 boincer umatlas    592394 Jan  7 23:00 input.tar.gz
[2026-01-08 00:44:04] -rw------- 1 boincer umatlas 220979900 Jan  8 00:42 HITS.pool.root.1
[2026-01-08 00:44:04] -rw------- 1 boincer umatlas   1280000 Jan  8 00:44 result.tar.gz
00:44:06 (7643): run_atlas exited; CPU time 66327.378738
00:44:06 (7643): called boinc_finish(0)

</stderr_txt>
]]>

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