Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:09:08 (674821): wrapper (7.7.26015): starting
23:09:08 (674821): wrapper: running run_atlas (--nthreads 10)
[2026-01-07 23:09:08] Arguments: --nthreads 10
[2026-01-07 23:09:08] Threads: 10
[2026-01-07 23:09:08] Checking for CVMFS
[2026-01-07 23:09:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 23:09:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 23:09:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 23:09:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 23:09:09] 2.13.3.0 9582 91449 160660 154889 0 687 39255533 40960000 24586 16776704 0 1102700123 99.715 824327626 48657 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-07 23:09:09] CVMFS is ok
[2026-01-07 23:09:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 23:09:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 23:09:09] Further information can be found at the LHC@home message board.
[2026-01-07 23:09:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 23:09:09] Checking for apptainer binary...
[2026-01-07 23:09:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 23:09:09] Running /usr/bin/apptainer --version
[2026-01-07 23:09:09] apptainer version 1.4.5-2.el9
[2026-01-07 23:09:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 23:09:10] c8-7-4.aglt2.org
[2026-01-07 23:09:10] apptainer works
[2026-01-07 23:09:10] Set ATHENA_PROC_NUMBER=10
[2026-01-07 23:09:10] Set ATHENA_CORE_NUMBER=10
[2026-01-07 23:09:10] Starting ATLAS job with PandaID=6962319725
[2026-01-07 23:09:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 01:59:22]  *** The last 200 lines of the pilot log: ***
[2026-01-08 01:59:22] 2026-01-08 06:58:20,605 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962319725/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 01:59:22] 2026-01-08 06:58:20,605 | INFO     | extracted standard info from prmon json
[2026-01-08 01:59:22] 2026-01-08 06:58:20,605 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 01:59:22] 2026-01-08 06:58:20,605 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 01:59:22] 2026-01-08 06:58:20,605 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 01:59:22] 2026-01-08 06:58:20,606 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 01:59:22] 2026-01-08 06:58:20,622 | INFO     | fitting pss+swap vs Time
[2026-01-08 01:59:22] 2026-01-08 06:58:20,622 | INFO     | sum of square deviations: 1342894291.546014
[2026-01-08 01:59:22] 2026-01-08 06:58:20,622 | INFO     | sum of deviations: 70687297207.38654
[2026-01-08 01:59:22] 2026-01-08 06:58:20,622 | INFO     | mean x: 1767850484.1226995
[2026-01-08 01:59:22] 2026-01-08 06:58:20,622 | INFO     | mean y: 2474110.030674847
[2026-01-08 01:59:22] 2026-01-08 06:58:20,623 | INFO     | intersect: -93053675861.04211
[2026-01-08 01:59:22] 2026-01-08 06:58:20,623 | INFO     | chi2: 5.784907857555844
[2026-01-08 01:59:22] 2026-01-08 06:58:20,623 | INFO     | sum of square deviations: 1223074888.9683614
[2026-01-08 01:59:22] 2026-01-08 06:58:20,623 | INFO     | sum of deviations: 78619966473.33557
[2026-01-08 01:59:22] 2026-01-08 06:58:20,623 | INFO     | mean x: 1767850331.6265824
[2026-01-08 01:59:22] 2026-01-08 06:58:20,623 | INFO     | mean y: 2483870.158227848
[2026-01-08 01:59:22] 2026-01-08 06:58:20,623 | INFO     | intersect: -113635965464.36362
[2026-01-08 01:59:22] 2026-01-08 06:58:20,623 | INFO     | chi2: 5.131593622125589
[2026-01-08 01:59:22] 2026-01-08 06:58:20,624 | INFO     | current chi2=5.131593622125589 (change=11.293425090201588 %)
[2026-01-08 01:59:22] 2026-01-08 06:58:20,624 | INFO     | right removable region: 157
[2026-01-08 01:59:22] 2026-01-08 06:58:20,624 | INFO     | sum of square deviations: 1223062688.9683614
[2026-01-08 01:59:22] 2026-01-08 06:58:20,624 | INFO     | sum of deviations: 16530016133.145567
[2026-01-08 01:59:22] 2026-01-08 06:58:20,624 | INFO     | mean x: 1767850636.6265824
[2026-01-08 01:59:22] 2026-01-08 06:58:20,624 | INFO     | mean y: 2542897.917721519
[2026-01-08 01:59:22] 2026-01-08 06:58:20,624 | INFO     | intersect: -23890426618.696327
[2026-01-08 01:59:22] 2026-01-08 06:58:20,624 | INFO     | chi2: 1.470401739355565
[2026-01-08 01:59:22] 2026-01-08 06:58:20,624 | INFO     | current chi2=1.470401739355565 (change=74.58210613614132 %)
[2026-01-08 01:59:22] 2026-01-08 06:58:20,624 | INFO     | sum of square deviations: 1110580061.385623
[2026-01-08 01:59:22] 2026-01-08 06:58:20,625 | INFO     | sum of deviations: -3714766937.5163403
[2026-01-08 01:59:22] 2026-01-08 06:58:20,625 | INFO     | mean x: 1767850789.130719
[2026-01-08 01:59:22] 2026-01-08 06:58:20,625 | INFO     | mean y: 2570128.8758169934
[2026-01-08 01:59:22] 2026-01-08 06:58:20,625 | INFO     | intersect: 5915834638.353334
[2026-01-08 01:59:22] 2026-01-08 06:58:20,625 | INFO     | chi2: 0.7947482576682566
[2026-01-08 01:59:22] 2026-01-08 06:58:20,625 | INFO     | current chi2=0.7947482576682566 (change=45.95026404031785 %)
[2026-01-08 01:59:22] 2026-01-08 06:58:20,625 | INFO     | sum of square deviations: 1005213846.297297
[2026-01-08 01:59:22] 2026-01-08 06:58:20,626 | INFO     | sum of deviations: -9994545655.58108
[2026-01-08 01:59:22] 2026-01-08 06:58:20,626 | INFO     | mean x: 1767850941.6351352
[2026-01-08 01:59:22] 2026-01-08 06:58:20,626 | INFO     | mean y: 2579134.304054054
[2026-01-08 01:59:22] 2026-01-08 06:58:20,626 | INFO     | intersect: 17579801148.82126
[2026-01-08 01:59:22] 2026-01-08 06:58:20,626 | INFO     | chi2: 0.7193120439517471
[2026-01-08 01:59:22] 2026-01-08 06:58:20,626 | INFO     | current chi2=0.7193120439517471 (change=9.491837571035996 %)
[2026-01-08 01:59:22] 2026-01-08 06:58:20,626 | INFO     | left removable region: 30
[2026-01-08 01:59:22] 2026-01-08 06:58:20,626 | INFO     | sum of square deviations: 635160944.1574801
[2026-01-08 01:59:22] 2026-01-08 06:58:20,626 | INFO     | sum of deviations: -1461562036.2834642
[2026-01-08 01:59:22] 2026-01-08 06:58:20,626 | INFO     | mean x: 1767851216.1496062
[2026-01-08 01:59:22] 2026-01-08 06:58:20,626 | INFO     | mean y: 2595299.3307086616
[2026-01-08 01:59:22] 2026-01-08 06:58:20,627 | INFO     | intersect: 4070578772.0065575
[2026-01-08 01:59:22] 2026-01-08 06:58:20,627 | INFO     | chi2: 0.0024793825303363534
[2026-01-08 01:59:22] 2026-01-08 06:58:20,627 | INFO     | current memory leak: -2.30 B/s (using 127 data points, chi2=0.00)
[2026-01-08 01:59:22] 2026-01-08 06:58:20,627 | INFO     | could have reported an average CPU frequency of 3772 MHz (9 samples)
[2026-01-08 01:59:22] 2026-01-08 06:58:20,627 | INFO     | ..............................
[2026-01-08 01:59:22] 2026-01-08 06:58:20,627 | INFO     | . Timing measurements:
[2026-01-08 01:59:22] 2026-01-08 06:58:20,627 | INFO     | . get job = 0 s
[2026-01-08 01:59:22] 2026-01-08 06:58:20,627 | INFO     | . initial setup = 6 s
[2026-01-08 01:59:22] 2026-01-08 06:58:20,627 | INFO     | . payload setup = 48 s
[2026-01-08 01:59:22] 2026-01-08 06:58:20,627 | INFO     | . stage-in = 0 s
[2026-01-08 01:59:22] 2026-01-08 06:58:20,627 | INFO     | . payload execution = 9940 s
[2026-01-08 01:59:22] 2026-01-08 06:58:20,627 | INFO     | . stage-out = 4 s
[2026-01-08 01:59:22] 2026-01-08 06:58:20,627 | INFO     | . log creation = 0 s
[2026-01-08 01:59:22] 2026-01-08 06:58:20,627 | INFO     | ..............................
[2026-01-08 01:59:22] 2026-01-08 06:58:20,753 | INFO     | 
[2026-01-08 01:59:22] 2026-01-08 06:58:20,759 | INFO     | job summary report
[2026-01-08 01:59:22] 2026-01-08 06:58:20,759 | INFO     | --------------------------------------------------
[2026-01-08 01:59:22] 2026-01-08 06:58:20,759 | INFO     | PanDA job id: 6962319725
[2026-01-08 01:59:22] 2026-01-08 06:58:20,759 | INFO     | task id: 47898826
[2026-01-08 01:59:22] 2026-01-08 06:58:20,759 | INFO     | errors: (none)
[2026-01-08 01:59:22] 2026-01-08 06:58:20,759 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 01:59:22] 2026-01-08 06:58:20,759 | INFO     | pilot state: finished 
[2026-01-08 01:59:22] 2026-01-08 06:58:20,759 | INFO     | transexitcode: 0
[2026-01-08 01:59:22] 2026-01-08 06:58:20,759 | INFO     | exeerrorcode: 0
[2026-01-08 01:59:22] 2026-01-08 06:58:20,759 | INFO     | exeerrordiag: 
[2026-01-08 01:59:22] 2026-01-08 06:58:20,759 | INFO     | exitcode: 0
[2026-01-08 01:59:22] 2026-01-08 06:58:20,759 | INFO     | exitmsg: OK
[2026-01-08 01:59:22] 2026-01-08 06:58:20,759 | INFO     | cpuconsumptiontime: 33073 s
[2026-01-08 01:59:22] 2026-01-08 06:58:20,759 | INFO     | nevents: 400
[2026-01-08 01:59:22] 2026-01-08 06:58:20,759 | INFO     | neventsw: 0
[2026-01-08 01:59:22] 2026-01-08 06:58:20,759 | INFO     | pid: 712890
[2026-01-08 01:59:22] 2026-01-08 06:58:20,759 | INFO     | pgrp: 712890
[2026-01-08 01:59:22] 2026-01-08 06:58:20,759 | INFO     | corecount: 10
[2026-01-08 01:59:22] 2026-01-08 06:58:20,759 | INFO     | event service: False
[2026-01-08 01:59:22] 2026-01-08 06:58:20,760 | INFO     | sizes: {0: 2283798, 1: 2283997, 12: 2283997, 23: 2284025, 32: 2284315, 34: 2284343, 9994: 2312971, 9999: 2321969, 10001: 2322025, 10037: 2322283}
[2026-01-08 01:59:22] 2026-01-08 06:58:20,760 | INFO     | --------------------------------------------------
[2026-01-08 01:59:22] 2026-01-08 06:58:20,771 | INFO     | 
[2026-01-08 01:59:22] 2026-01-08 06:58:20,772 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 01:59:22] 2026-01-08 06:58:20,990 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 01:59:22] 2026-01-08 06:58:20,990 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 01:59:22] 2026-01-08 06:58:20,990 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 01:59:22] 2026-01-08 06:58:20,990 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 01:59:22] 2026-01-08 06:58:20,990 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 01:59:22] 2026-01-08 06:58:20,990 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 01:59:22] 2026-01-08 06:58:20,990 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 01:59:22] 2026-01-08 06:58:20,990 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 01:59:22] 2026-01-08 06:58:20,990 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 01:59:22] 2026-01-08 06:58:20,990 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 01:59:22] 2026-01-08 06:58:20,990 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 01:59:22] 2026-01-08 06:58:20,990 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 01:59:22] 2026-01-08 06:58:20,990 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 01:59:22] 2026-01-08 06:58:20,991 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 01:59:22] 2026-01-08 06:58:20,991 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 01:59:22] 2026-01-08 06:58:20,991 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 01:59:22] 2026-01-08 06:58:20,991 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 01:59:22] 2026-01-08 06:58:20,991 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 01:59:22] 2026-01-08 06:58:20,991 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 01:59:22] 2026-01-08 06:58:20,991 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 01:59:22] 2026-01-08 06:58:20,991 | INFO     | job 6962319725 has completed (purged errors)
[2026-01-08 01:59:22] 2026-01-08 06:58:20,991 | INFO     | overall cleanup function is called
[2026-01-08 01:59:22] 2026-01-08 06:58:21,998 | INFO     | --- collectZombieJob: --- 10, [712890]
[2026-01-08 01:59:22] 2026-01-08 06:58:21,999 | INFO     | zombie collector waiting for pid 712890
[2026-01-08 01:59:22] 2026-01-08 06:58:21,999 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 01:59:22] 2026-01-08 06:58:21,999 | INFO     | collected zombie processes
[2026-01-08 01:59:22] 2026-01-08 06:58:21,999 | INFO     | will attempt to kill all subprocesses of pid=712890
[2026-01-08 01:59:22] 2026-01-08 06:58:23,403 | INFO     | PID=687525 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 01:59:22] 2026-01-08 06:58:23,403 | INFO     | .. there are 25 such processes running
[2026-01-08 01:59:22] 2026-01-08 06:58:23,819 | INFO     | process IDs to be killed: [712890] (in reverse order)
[2026-01-08 01:59:22] 2026-01-08 06:58:24,635 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 01:59:22] 2026-01-08 06:58:24,635 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 01:59:22] 2026-01-08 06:58:24,760 | INFO     | did not find any defunct processes belonging to 712890
[2026-01-08 01:59:22] 2026-01-08 06:58:24,987 | INFO     | did not find any defunct processes belonging to 712890
[2026-01-08 01:59:22] 2026-01-08 06:58:24,988 | INFO     | ready for new job
[2026-01-08 01:59:22] 2026-01-08 06:58:24,988 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 01:59:22] 2026-01-08 06:58:24,989 | INFO     | ***************************************
[2026-01-08 01:59:22] 2026-01-08 06:58:24,993 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 01:59:22] 2026-01-08 06:58:24,993 | INFO     | ***************************************
[2026-01-08 01:59:22] 2026-01-08 06:58:24,993 | INFO     | 
[2026-01-08 01:59:22] 2026-01-08 06:58:25,002 | INFO     | architecture information:
[2026-01-08 01:59:22] 2026-01-08 06:58:25,006 | INFO     | executing command: cat /etc/os-release
[2026-01-08 01:59:22] 2026-01-08 06:58:25,080 | INFO     | cat /etc/os-release:
[2026-01-08 01:59:22] NAME="CentOS Linux"
[2026-01-08 01:59:22] VERSION="7 (Core)"
[2026-01-08 01:59:22] ID="centos"
[2026-01-08 01:59:22] ID_LIKE="rhel fedora"
[2026-01-08 01:59:22] VERSION_ID="7"
[2026-01-08 01:59:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 01:59:22] ANSI_COLOR="0;31"
[2026-01-08 01:59:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 01:59:22] HOME_URL="https://www.centos.org/"
[2026-01-08 01:59:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 01:59:22] 
[2026-01-08 01:59:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 01:59:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 01:59:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 01:59:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 01:59:22] 
[2026-01-08 01:59:22] 2026-01-08 06:58:25,080 | INFO     | ***************************************
[2026-01-08 01:59:22] 2026-01-08 06:58:25,584 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 01:59:22] 2026-01-08 06:58:25,725 | INFO     | sufficient remaining disk space (171754651648 B)
[2026-01-08 01:59:22] 2026-01-08 06:58:25,725 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 01:59:22] 2026-01-08 06:58:25,725 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 01:59:22] 2026-01-08 06:58:25,725 | INFO     | update_server=False
[2026-01-08 01:59:22] 2026-01-08 06:58:25,725 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 01:59:22] 2026-01-08 06:58:25,788 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 01:59:22] 2026-01-08 06:58:25,789 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 01:59:22] 2026-01-08 06:58:25,789 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 01:59:22] 2026-01-08 06:58:25,789 | INFO     | will abort loop
[2026-01-08 01:59:22] 2026-01-08 06:58:25,794 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 01:59:22] 2026-01-08 06:58:25,875 | INFO     | all payload control threads have been joined
[2026-01-08 01:59:22] 2026-01-08 06:58:26,409 | INFO     | all job control threads have been joined
[2026-01-08 01:59:22] 2026-01-08 06:58:26,413 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 01:59:22] 2026-01-08 06:58:26,669 | INFO     | all data control threads have been joined
[2026-01-08 01:59:22] 2026-01-08 06:58:26,732 | INFO     | [job] retrieve thread has finished
[2026-01-08 01:59:22] 2026-01-08 06:58:26,795 | INFO     | [job] job monitor thread has finished
[2026-01-08 01:59:22] 2026-01-08 06:58:26,800 | INFO     | [job] queue monitor thread has finished
[2026-01-08 01:59:22] 2026-01-08 06:58:26,881 | INFO     | [payload] control thread has finished
[2026-01-08 01:59:22] 2026-01-08 06:58:27,169 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 01:59:22] 2026-01-08 06:58:27,259 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 01:59:22] 2026-01-08 06:58:27,263 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 01:59:22] 2026-01-08 06:58:27,366 | INFO     | [data] copytool_in thread has finished
[2026-01-08 01:59:22] 2026-01-08 06:58:27,415 | INFO     | [job] control thread has finished
[2026-01-08 01:59:22] 2026-01-08 06:58:27,646 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 01:59:22] 2026-01-08 06:58:27,663 | INFO     | [payload] validate_post thread has finished
[2026-01-08 01:59:22] 2026-01-08 06:58:27,664 | INFO     | [payload] failed_post thread has finished
[2026-01-08 01:59:22] 2026-01-08 06:58:27,675 | INFO     | [data] control thread has finished
[2026-01-08 01:59:22] 2026-01-08 06:58:27,698 | INFO     | [job] validate thread has finished
[2026-01-08 01:59:22] 2026-01-08 06:58:27,702 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 01:59:22] 2026-01-08 06:58:28,420 | INFO     | [data] copytool_out thread has finished
[2026-01-08 01:59:22] 2026-01-08 06:58:31,667 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 01:59:22] 2026-01-08 06:58:58,632 | INFO     | PID=687525 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 01:59:22] 2026-01-08 06:58:58,632 | INFO     | .. there are 25 such processes running
[2026-01-08 01:59:22] 2026-01-08 06:58:58,632 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 01:59:22] 2026-01-08 06:58:58,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 01:59:22] 2026-01-08 06:58:58,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 01:59:22] 2026-01-08 06:59:13,706 | INFO     | [monitor] cgroup control has ended
[2026-01-08 01:59:22] 2026-01-08 06:59:14,838 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140123299317568)>', '<ExcThread(monitor, started 140122947307264)>']
[2026-01-08 01:59:22] 2026-01-08 06:59:15,733 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 01:59:22] 2026-01-08 06:59:15,734 | INFO     | [monitor] control thread has ended
[2026-01-08 01:59:22] 2026-01-08 06:59:19,867 | INFO     | all workflow threads have been joined
[2026-01-08 01:59:22] 2026-01-08 06:59:19,868 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 01:59:22] 2026-01-08 06:59:19,868 | INFO     | traces error code: 0
[2026-01-08 01:59:22] 2026-01-08 06:59:19,868 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 01:59:22] 2026-01-08 06:59:21,439 [wrapper] ==== pilot stdout END ====
[2026-01-08 01:59:22] 2026-01-08 06:59:21,469 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 01:59:22] 2026-01-08 06:59:21,500 [wrapper] pilotpid: 687525
[2026-01-08 01:59:22] 2026-01-08 06:59:21,523 [wrapper] Pilot exit status: 0
[2026-01-08 01:59:22] 2026-01-08 06:59:21,645 [wrapper] pandaids: 6962319725
[2026-01-08 01:59:22] 2026-01-08 06:59:22,201 [wrapper] cleanup supervisor_pilot 1650397 687526
[2026-01-08 01:59:22] 2026-01-08 06:59:22,207 [wrapper] Test setup, not cleaning
[2026-01-08 01:59:22] 2026-01-08 06:59:22,210 [wrapper] apfmon messages muted
[2026-01-08 01:59:22] 2026-01-08 06:59:22,212 [wrapper] ==== wrapper stdout END ====
[2026-01-08 01:59:22] 2026-01-08 06:59:22,216 [wrapper] ==== wrapper stderr END ====
[2026-01-08 01:59:22]  *** Error codes and diagnostics ***
[2026-01-08 01:59:22]     "exeErrorCode": 0,
[2026-01-08 01:59:22]     "exeErrorDiag": "",
[2026-01-08 01:59:22]     "pilotErrorCode": 0,
[2026-01-08 01:59:22]     "pilotErrorDiag": "",
[2026-01-08 01:59:22]  *** Listing of results directory ***
[2026-01-08 01:59:22] total 443636
[2026-01-08 01:59:22] -rwx------. 1 boincer umatlas     36322 Jan  7 15:59 runpilot2-wrapper.sh
[2026-01-08 01:59:22] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 16:00 pilot3.tar.gz
[2026-01-08 01:59:22] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 16:02 queuedata.json
[2026-01-08 01:59:22] -rw-r--r--. 1 boincer umatlas       100 Jan  7 23:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 01:59:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  7 23:09 run_atlas
[2026-01-08 01:59:22] -rw-r--r--. 1 boincer umatlas       105 Jan  7 23:09 job.xml
[2026-01-08 01:59:22] -rw-r--r--. 2 boincer umatlas 226336834 Jan  7 23:09 EVNT.47898824._000590.pool.root.1
[2026-01-08 01:59:22] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 23:09 start_atlas.sh
[2026-01-08 01:59:22] drwxrwx--x. 2 boincer umatlas      4096 Jan  7 23:09 shared
[2026-01-08 01:59:22] -rw-r--r--. 2 boincer umatlas    592397 Jan  7 23:09 input.tar.gz
[2026-01-08 01:59:22] -rw-r--r--. 1 boincer umatlas         0 Jan  7 23:09 boinc_lockfile
[2026-01-08 01:59:22] -rw-r--r--. 1 boincer umatlas      2519 Jan  7 23:09 pandaJob.out
[2026-01-08 01:59:22] -rw-------. 1 boincer umatlas        57 Jan  7 23:09 setup.sh.local
[2026-01-08 01:59:22] -rw-------. 1 boincer umatlas    989835 Jan  7 23:09 agis_schedconf.cvmfs.json
[2026-01-08 01:59:22] -rw-------. 1 boincer umatlas   1516240 Jan  7 23:09 agis_ddmendpoints.agis.ALL.json
[2026-01-08 01:59:22] drwx------. 5 boincer umatlas      4096 Jan  7 23:09 pilot3
[2026-01-08 01:59:22] -rw-r--r--. 1 boincer umatlas      7170 Jan  8 01:54 init_data.xml
[2026-01-08 01:59:22] -rw-------. 1 boincer umatlas 220644468 Jan  8 01:56 HITS.47898826._013602.pool.root.1
[2026-01-08 01:59:22] -rw-r--r--. 1 boincer umatlas       530 Jan  8 01:56 boinc_task_state.xml
[2026-01-08 01:59:22] -rw-------. 1 boincer umatlas      1045 Jan  8 01:57 memory_monitor_summary.json
[2026-01-08 01:59:22] -rw-------. 1 boincer umatlas    421657 Jan  8 01:57 log.47898826._013602.job.log.tgz.1
[2026-01-08 01:59:22] -rw-------. 1 boincer umatlas        95 Jan  8 01:58 pilot_heartbeat.json
[2026-01-08 01:59:22] -rw-------. 1 boincer umatlas      7795 Jan  8 01:58 heartbeat.json
[2026-01-08 01:59:22] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 01:59 boinc_mmap_file
[2026-01-08 01:59:22] -rw-r--r--. 1 boincer umatlas        27 Jan  8 01:59 wrapper_checkpoint.txt
[2026-01-08 01:59:22] -rw-------. 1 boincer umatlas      5010 Jan  8 01:59 pilotlog.txt
[2026-01-08 01:59:22] -rw-------. 1 boincer umatlas   1272344 Jan  8 01:59 log.47898826._013602.job.log.1
[2026-01-08 01:59:22] -rw-------. 1 boincer umatlas       357 Jan  8 01:59 output.list
[2026-01-08 01:59:22] -rw-r--r--. 1 boincer umatlas       620 Jan  8 01:59 runtime_log
[2026-01-08 01:59:22] -rw-------. 1 boincer umatlas   1710080 Jan  8 01:59 result.tar.gz
[2026-01-08 01:59:22] -rw-r--r--. 1 boincer umatlas      9335 Jan  8 01:59 runtime_log.err
[2026-01-08 01:59:22] -rw-------. 1 boincer umatlas       657 Jan  8 01:59 O4AODm5npx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmildKDmem6gMm.diag
[2026-01-08 01:59:22] -rw-r--r--. 1 boincer umatlas     21277 Jan  8 01:59 stderr.txt
[2026-01-08 01:59:22] HITS file was successfully produced:
[2026-01-08 01:59:22] -rw-------. 1 boincer umatlas 220644468 Jan  8 01:56 shared/HITS.pool.root.1
[2026-01-08 01:59:22]  *** Contents of shared directory: ***
[2026-01-08 01:59:22] total 438784
[2026-01-08 01:59:22] -rw-r--r--. 2 boincer umatlas 226336834 Jan  7 23:09 ATLAS.root_0
[2026-01-08 01:59:22] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 23:09 start_atlas.sh
[2026-01-08 01:59:22] -rw-r--r--. 2 boincer umatlas    592397 Jan  7 23:09 input.tar.gz
[2026-01-08 01:59:22] -rw-------. 1 boincer umatlas 220644468 Jan  8 01:56 HITS.pool.root.1
[2026-01-08 01:59:22] -rw-------. 1 boincer umatlas   1710080 Jan  8 01:59 result.tar.gz
01:59:24 (674821): run_atlas exited; CPU time 33389.212810
01:59:24 (674821): called boinc_finish(0)

</stderr_txt>
]]>

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