Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:08 (3351852): wrapper (7.7.26015): starting
00:01:08 (3351852): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 00:01:08] Arguments: --nthreads 12
[2026-01-08 00:01:08] Threads: 12
[2026-01-08 00:01:08] Checking for CVMFS
[2026-01-08 00:01:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 00:01:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 00:01:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 00:01:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 00:01:10] 2.13.3.0 7268 20996 204224 154891 3 324 35171283 40960001 18018 16776704 0 48129007 99.656 44189943 38704 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 00:01:10] CVMFS is ok
[2026-01-08 00:01:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 00:01:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 00:01:10] Further information can be found at the LHC@home message board.
[2026-01-08 00:01:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 00:01:10] Checking for apptainer binary...
[2026-01-08 00:01:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 00:01:10] Running /usr/bin/apptainer --version
[2026-01-08 00:01:10] apptainer version 1.4.5-2.el9
[2026-01-08 00:01:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 00:01:10] c-212-18.aglt2.org
[2026-01-08 00:01:10] apptainer works
[2026-01-08 00:01:10] Set ATHENA_PROC_NUMBER=12
[2026-01-08 00:01:10] Set ATHENA_CORE_NUMBER=12
[2026-01-08 00:01:10] Starting ATLAS job with PandaID=6962322428
[2026-01-08 00:01:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 07:57:59]  *** The last 200 lines of the pilot log: ***
[2026-01-08 07:58:00] 2026-01-08 12:57:20,616 | INFO     | monitor loop #1758: job 0:6962322428 is in state 'finished'
[2026-01-08 07:58:00] 2026-01-08 12:57:20,616 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 07:58:00] 2026-01-08 12:57:21,104 | INFO     | time since job start (28518s) is within the limit (174528.0s)
[2026-01-08 07:58:00] 2026-01-08 12:57:23,138 | INFO     | monitor loop #1759: job 0:6962322428 is in state 'finished'
[2026-01-08 07:58:00] 2026-01-08 12:57:23,138 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 07:58:00] 2026-01-08 12:57:24,381 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 07:58:00] 2026-01-08 12:57:24,517 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3363.560666666666
[2026-01-08 07:58:00] 2026-01-08 12:57:24,534 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6962322428/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 07:58:00] 2026-01-08 12:57:24,535 | INFO     | extracted standard info from prmon json
[2026-01-08 07:58:00] 2026-01-08 12:57:24,535 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 07:58:00] 2026-01-08 12:57:24,535 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 07:58:00] 2026-01-08 12:57:24,535 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 07:58:00] 2026-01-08 12:57:24,535 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 07:58:00] 2026-01-08 12:57:24,541 | INFO     | fitting pss+swap vs Time
[2026-01-08 07:58:00] 2026-01-08 12:57:24,542 | INFO     | sum of square deviations: 31378617322.28546
[2026-01-08 07:58:00] 2026-01-08 12:57:24,546 | INFO     | sum of deviations: 415346816147.6435
[2026-01-08 07:58:00] 2026-01-08 12:57:24,546 | INFO     | mean x: 1767862794.5214593
[2026-01-08 07:58:00] 2026-01-08 12:57:24,546 | INFO     | mean y: 2627520.9356223177
[2026-01-08 07:58:00] 2026-01-08 12:57:24,546 | INFO     | intersect: -23397899517.866444
[2026-01-08 07:58:00] 2026-01-08 12:57:24,546 | INFO     | chi2: 3.8006761397935085
[2026-01-08 07:58:00] 2026-01-08 12:57:24,547 | INFO     | sum of square deviations: 30379373729.783016
[2026-01-08 07:58:00] 2026-01-08 12:57:24,551 | INFO     | sum of deviations: 409175287074.5869
[2026-01-08 07:58:00] 2026-01-08 12:57:24,551 | INFO     | mean x: 1767862642.021692
[2026-01-08 07:58:00] 2026-01-08 12:57:24,551 | INFO     | mean y: 2626580.0412147506
[2026-01-08 07:58:00] 2026-01-08 12:57:24,551 | INFO     | intersect: -23808453611.79624
[2026-01-08 07:58:00] 2026-01-08 12:57:24,551 | INFO     | chi2: 3.7972823032610545
[2026-01-08 07:58:00] 2026-01-08 12:57:24,551 | INFO     | current chi2=3.7972823032610545 (change=0.08929559919405133 %)
[2026-01-08 07:58:00] 2026-01-08 12:57:24,551 | INFO     | right removable region: 460
[2026-01-08 07:58:00] 2026-01-08 12:57:24,552 | INFO     | sum of square deviations: 30379367629.783016
[2026-01-08 07:58:00] 2026-01-08 12:57:24,556 | INFO     | sum of deviations: 284665459414.44293
[2026-01-08 07:58:00] 2026-01-08 12:57:24,556 | INFO     | mean x: 1767862947.021692
[2026-01-08 07:58:00] 2026-01-08 12:57:24,556 | INFO     | mean y: 2647434.355748373
[2026-01-08 07:58:00] 2026-01-08 12:57:24,556 | INFO     | intersect: -16562855973.369247
[2026-01-08 07:58:00] 2026-01-08 12:57:24,556 | INFO     | chi2: 1.1906513898930209
[2026-01-08 07:58:00] 2026-01-08 12:57:24,556 | INFO     | current chi2=1.1906513898930209 (change=68.67264281145225 %)
[2026-01-08 07:58:00] 2026-01-08 12:57:24,557 | INFO     | sum of square deviations: 29401560199.780872
[2026-01-08 07:58:00] 2026-01-08 12:57:24,561 | INFO     | sum of deviations: 245675237862.85965
[2026-01-08 07:58:00] 2026-01-08 12:57:24,561 | INFO     | mean x: 1767863099.5219297
[2026-01-08 07:58:00] 2026-01-08 12:57:24,561 | INFO     | mean y: 2653509.1140350876
[2026-01-08 07:58:00] 2026-01-08 12:57:24,561 | INFO     | intersect: -14769358062.137867
[2026-01-08 07:58:00] 2026-01-08 12:57:24,561 | INFO     | chi2: 1.0241502483153881
[2026-01-08 07:58:00] 2026-01-08 12:57:24,561 | INFO     | current chi2=1.0241502483153881 (change=13.984037896482256 %)
[2026-01-08 07:58:00] 2026-01-08 12:57:24,562 | INFO     | left removable region: 20
[2026-01-08 07:58:00] 2026-01-08 12:57:24,562 | INFO     | sum of square deviations: 26413939957.815823
[2026-01-08 07:58:00] 2026-01-08 12:57:24,566 | INFO     | sum of deviations: 159749168525.78415
[2026-01-08 07:58:00] 2026-01-08 12:57:24,566 | INFO     | mean x: 1767863221.5204546
[2026-01-08 07:58:00] 2026-01-08 12:57:24,566 | INFO     | mean y: 2666112.0795454546
[2026-01-08 07:58:00] 2026-01-08 12:57:24,566 | INFO     | intersect: -10689214014.71089
[2026-01-08 07:58:00] 2026-01-08 12:57:24,566 | INFO     | chi2: 0.6123272150464626
[2026-01-08 07:58:00] 2026-01-08 12:57:24,566 | INFO     | current memory leak: 6.05 B/s (using 440 data points, chi2=0.61)
[2026-01-08 07:58:00] 2026-01-08 12:57:24,567 | INFO     | could have reported an average CPU frequency of 3236 MHz (19 samples)
[2026-01-08 07:58:00] 2026-01-08 12:57:24,567 | INFO     | ..............................
[2026-01-08 07:58:00] 2026-01-08 12:57:24,567 | INFO     | . Timing measurements:
[2026-01-08 07:58:00] 2026-01-08 12:57:24,567 | INFO     | . get job = 0 s
[2026-01-08 07:58:00] 2026-01-08 12:57:24,567 | INFO     | . initial setup = 6 s
[2026-01-08 07:58:00] 2026-01-08 12:57:24,567 | INFO     | . payload setup = 15 s
[2026-01-08 07:58:00] 2026-01-08 12:57:24,567 | INFO     | . stage-in = 0 s
[2026-01-08 07:58:00] 2026-01-08 12:57:24,567 | INFO     | . payload execution = 28423 s
[2026-01-08 07:58:00] 2026-01-08 12:57:24,567 | INFO     | . stage-out = 4 s
[2026-01-08 07:58:00] 2026-01-08 12:57:24,567 | INFO     | . log creation = 1 s
[2026-01-08 07:58:00] 2026-01-08 12:57:24,567 | INFO     | ..............................
[2026-01-08 07:58:00] 2026-01-08 12:57:24,625 | INFO     | PID=3356427 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 07:58:00] 2026-01-08 12:57:24,625 | INFO     | .. there are 18 such processes running
[2026-01-08 07:58:00] 2026-01-08 12:57:24,662 | INFO     | 
[2026-01-08 07:58:00] 2026-01-08 12:57:24,662 | INFO     | job summary report
[2026-01-08 07:58:00] 2026-01-08 12:57:24,662 | INFO     | --------------------------------------------------
[2026-01-08 07:58:00] 2026-01-08 12:57:24,662 | INFO     | PanDA job id: 6962322428
[2026-01-08 07:58:00] 2026-01-08 12:57:24,662 | INFO     | task id: 47898826
[2026-01-08 07:58:00] 2026-01-08 12:57:24,662 | INFO     | errors: (none)
[2026-01-08 07:58:00] 2026-01-08 12:57:24,662 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 07:58:00] 2026-01-08 12:57:24,662 | INFO     | pilot state: finished 
[2026-01-08 07:58:00] 2026-01-08 12:57:24,662 | INFO     | transexitcode: 0
[2026-01-08 07:58:00] 2026-01-08 12:57:24,662 | INFO     | exeerrorcode: 0
[2026-01-08 07:58:00] 2026-01-08 12:57:24,663 | INFO     | exeerrordiag: 
[2026-01-08 07:58:00] 2026-01-08 12:57:24,663 | INFO     | exitcode: 0
[2026-01-08 07:58:00] 2026-01-08 12:57:24,686 | INFO     | exitmsg: OK
[2026-01-08 07:58:00] 2026-01-08 12:57:24,686 | INFO     | cpuconsumptiontime: 47796 s
[2026-01-08 07:58:00] 2026-01-08 12:57:24,686 | INFO     | nevents: 400
[2026-01-08 07:58:00] 2026-01-08 12:57:24,686 | INFO     | neventsw: 0
[2026-01-08 07:58:00] 2026-01-08 12:57:24,686 | INFO     | pid: 3364222
[2026-01-08 07:58:00] 2026-01-08 12:57:24,686 | INFO     | pgrp: 3364222
[2026-01-08 07:58:00] 2026-01-08 12:57:24,686 | INFO     | corecount: 12
[2026-01-08 07:58:00] 2026-01-08 12:57:24,686 | INFO     | event service: False
[2026-01-08 07:58:00] 2026-01-08 12:57:24,686 | INFO     | sizes: {0: 2283798, 1: 2283997, 12: 2283997, 23: 2284315, 34: 2284315, 28443: 2321523, 28448: 2330521, 28449: 2330577, 28470: 2330771}
[2026-01-08 07:58:00] 2026-01-08 12:57:24,686 | INFO     | --------------------------------------------------
[2026-01-08 07:58:00] 2026-01-08 12:57:24,691 | INFO     | 
[2026-01-08 07:58:00] 2026-01-08 12:57:24,691 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-08 07:58:00] 2026-01-08 12:57:24,881 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 07:58:00] 2026-01-08 12:57:24,882 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 07:58:00] 2026-01-08 12:57:24,882 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 07:58:00] 2026-01-08 12:57:24,882 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 07:58:00] 2026-01-08 12:57:24,882 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 07:58:00] 2026-01-08 12:57:24,882 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 07:58:00] 2026-01-08 12:57:24,882 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 07:58:00] 2026-01-08 12:57:24,882 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 07:58:00] 2026-01-08 12:57:24,882 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 07:58:00] 2026-01-08 12:57:24,882 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 07:58:00] 2026-01-08 12:57:24,882 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 07:58:00] 2026-01-08 12:57:24,882 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 07:58:00] 2026-01-08 12:57:24,882 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 07:58:00] 2026-01-08 12:57:24,883 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 07:58:00] 2026-01-08 12:57:24,883 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 07:58:00] 2026-01-08 12:57:24,883 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 07:58:00] 2026-01-08 12:57:24,883 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 07:58:00] 2026-01-08 12:57:24,883 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 07:58:00] 2026-01-08 12:57:24,883 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 07:58:00] 2026-01-08 12:57:24,883 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 07:58:00] 2026-01-08 12:57:24,883 | INFO     | job 6962322428 has completed (purged errors)
[2026-01-08 07:58:00] 2026-01-08 12:57:24,883 | INFO     | overall cleanup function is called
[2026-01-08 07:58:00] 2026-01-08 12:57:25,915 | INFO     | --- collectZombieJob: --- 10, [3364222]
[2026-01-08 07:58:00] 2026-01-08 12:57:25,915 | INFO     | zombie collector waiting for pid 3364222
[2026-01-08 07:58:00] 2026-01-08 12:57:25,915 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 07:58:00] 2026-01-08 12:57:25,915 | INFO     | collected zombie processes
[2026-01-08 07:58:00] 2026-01-08 12:57:25,915 | INFO     | will attempt to kill all subprocesses of pid=3364222
[2026-01-08 07:58:00] 2026-01-08 12:57:26,745 | INFO     | process IDs to be killed: [3364222] (in reverse order)
[2026-01-08 07:58:00] 2026-01-08 12:57:27,221 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 07:58:00] 2026-01-08 12:57:27,222 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 07:58:00] 2026-01-08 12:57:27,265 | INFO     | did not find any defunct processes belonging to 3364222
[2026-01-08 07:58:00] 2026-01-08 12:57:27,334 | INFO     | did not find any defunct processes belonging to 3364222
[2026-01-08 07:58:00] 2026-01-08 12:57:27,335 | INFO     | ready for new job
[2026-01-08 07:58:00] 2026-01-08 12:57:27,335 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 07:58:00] 2026-01-08 12:57:27,348 | INFO     | ***************************************
[2026-01-08 07:58:00] 2026-01-08 12:57:27,348 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 07:58:00] 2026-01-08 12:57:27,348 | INFO     | ***************************************
[2026-01-08 07:58:00] 2026-01-08 12:57:27,348 | INFO     | 
[2026-01-08 07:58:00] 2026-01-08 12:57:27,363 | INFO     | architecture information:
[2026-01-08 07:58:00] 2026-01-08 12:57:27,367 | INFO     | executing command: cat /etc/os-release
[2026-01-08 07:58:00] 2026-01-08 12:57:27,473 | INFO     | cat /etc/os-release:
[2026-01-08 07:58:00] NAME="CentOS Linux"
[2026-01-08 07:58:00] VERSION="7 (Core)"
[2026-01-08 07:58:00] ID="centos"
[2026-01-08 07:58:00] ID_LIKE="rhel fedora"
[2026-01-08 07:58:00] VERSION_ID="7"
[2026-01-08 07:58:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 07:58:00] ANSI_COLOR="0;31"
[2026-01-08 07:58:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 07:58:00] HOME_URL="https://www.centos.org/"
[2026-01-08 07:58:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 07:58:00] 
[2026-01-08 07:58:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 07:58:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 07:58:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 07:58:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 07:58:00] 
[2026-01-08 07:58:00] 2026-01-08 12:57:27,473 | INFO     | ***************************************
[2026-01-08 07:58:00] 2026-01-08 12:57:27,979 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-08 07:58:00] 2026-01-08 12:57:28,008 | INFO     | sufficient remaining disk space (128059441152 B)
[2026-01-08 07:58:00] 2026-01-08 12:57:28,009 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 07:58:00] 2026-01-08 12:57:28,009 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 07:58:00] 2026-01-08 12:57:28,009 | INFO     | update_server=False
[2026-01-08 07:58:00] 2026-01-08 12:57:28,009 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 07:58:00] 2026-01-08 12:57:28,009 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 07:58:00] 2026-01-08 12:57:28,179 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 07:58:00] 2026-01-08 12:57:28,179 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 07:58:00] 2026-01-08 12:57:28,179 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 07:58:00] 2026-01-08 12:57:28,179 | INFO     | will abort loop
[2026-01-08 07:58:00] 2026-01-08 12:57:28,503 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 07:58:00] 2026-01-08 12:57:28,777 | INFO     | all data control threads have been joined
[2026-01-08 07:58:00] 2026-01-08 12:57:29,015 | INFO     | [job] retrieve thread has finished
[2026-01-08 07:58:00] 2026-01-08 12:57:29,085 | INFO     | all payload control threads have been joined
[2026-01-08 07:58:00] 2026-01-08 12:57:29,184 | INFO     | [job] job monitor thread has finished
[2026-01-08 07:58:00] 2026-01-08 12:57:29,235 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 07:58:00] 2026-01-08 12:57:29,312 | INFO     | all job control threads have been joined
[2026-01-08 07:58:00] 2026-01-08 12:57:29,535 | INFO     | [payload] validate_post thread has finished
[2026-01-08 07:58:00] 2026-01-08 12:57:29,671 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 07:58:00] 2026-01-08 12:57:29,762 | INFO     | [data] copytool_in thread has finished
[2026-01-08 07:58:00] 2026-01-08 12:57:29,783 | INFO     | [data] control thread has finished
[2026-01-08 07:58:00] 2026-01-08 12:57:29,811 | INFO     | [job] validate thread has finished
[2026-01-08 07:58:00] 2026-01-08 12:57:30,091 | INFO     | [payload] control thread has finished
[2026-01-08 07:58:00] 2026-01-08 12:57:30,103 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 07:58:00] 2026-01-08 12:57:30,279 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 07:58:00] 2026-01-08 12:57:30,318 | INFO     | [job] control thread has finished
[2026-01-08 07:58:00] 2026-01-08 12:57:30,379 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 07:58:00] 2026-01-08 12:57:30,519 | INFO     | [data] copytool_out thread has finished
[2026-01-08 07:58:00] 2026-01-08 12:57:30,523 | INFO     | [payload] failed_post thread has finished
[2026-01-08 07:58:00] 2026-01-08 12:57:30,677 | INFO     | [job] queue monitor thread has finished
[2026-01-08 07:58:00] 2026-01-08 12:57:32,021 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 07:58:00] 2026-01-08 12:57:52,206 | INFO     | [monitor] cgroup control has ended
[2026-01-08 07:58:00] 2026-01-08 12:57:53,144 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140459059124032)>', '<ExcThread(monitor, started 140458709739264)>']
[2026-01-08 07:58:00] 2026-01-08 12:57:57,150 | INFO     | PID=3356427 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 07:58:00] 2026-01-08 12:57:57,151 | INFO     | .. there are 18 such processes running
[2026-01-08 07:58:00] 2026-01-08 12:57:57,151 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 07:58:00] 2026-01-08 12:57:57,152 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 07:58:00] 2026-01-08 12:57:57,152 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 07:58:00] 2026-01-08 12:57:57,152 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 07:58:00] 2026-01-08 12:57:57,152 | INFO     | [monitor] control thread has ended
[2026-01-08 07:58:00] 2026-01-08 12:57:58,170 | INFO     | all workflow threads have been joined
[2026-01-08 07:58:00] 2026-01-08 12:57:58,173 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 07:58:00] 2026-01-08 12:57:58,173 | INFO     | traces error code: 0
[2026-01-08 07:58:00] 2026-01-08 12:57:58,173 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 07:58:00] 2026-01-08 12:57:59,020 [wrapper] ==== pilot stdout END ====
[2026-01-08 07:58:00] 2026-01-08 12:57:59,032 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 07:58:00] 2026-01-08 12:57:59,052 [wrapper] pilotpid: 3356427
[2026-01-08 07:58:00] 2026-01-08 12:57:59,076 [wrapper] Pilot exit status: 0
[2026-01-08 07:58:00] 2026-01-08 12:57:59,268 [wrapper] pandaids: 6962322428
[2026-01-08 07:58:00] 2026-01-08 12:57:59,654 [wrapper] cleanup supervisor_pilot 1721408 3356428
[2026-01-08 07:58:00] 2026-01-08 12:57:59,657 [wrapper] Test setup, not cleaning
[2026-01-08 07:58:00] 2026-01-08 12:57:59,659 [wrapper] apfmon messages muted
[2026-01-08 07:58:00] 2026-01-08 12:57:59,670 [wrapper] ==== wrapper stdout END ====
[2026-01-08 07:58:00] 2026-01-08 12:57:59,703 [wrapper] ==== wrapper stderr END ====
[2026-01-08 07:58:00]  *** Error codes and diagnostics ***
[2026-01-08 07:58:00]     "exeErrorCode": 0,
[2026-01-08 07:58:00]     "exeErrorDiag": "",
[2026-01-08 07:58:00]     "pilotErrorCode": 0,
[2026-01-08 07:58:00]     "pilotErrorDiag": "",
[2026-01-08 07:58:00]  *** Listing of results directory ***
[2026-01-08 07:58:00] total 449760
[2026-01-08 07:58:00] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 16:00 pilot3.tar.gz
[2026-01-08 07:58:00] -rwx------. 1 boincer umatlas     36322 Jan  7 16:09 runpilot2-wrapper.sh
[2026-01-08 07:58:00] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 16:16 queuedata.json
[2026-01-08 07:58:00] -rw-r--r--. 1 boincer umatlas       100 Jan  8 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 07:58:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 00:01 run_atlas
[2026-01-08 07:58:00] -rw-r--r--. 1 boincer umatlas       105 Jan  8 00:01 job.xml
[2026-01-08 07:58:00] -rw-r--r--. 2 boincer umatlas 224946023 Jan  8 00:01 EVNT.47898824._000716.pool.root.1
[2026-01-08 07:58:00] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 00:01 start_atlas.sh
[2026-01-08 07:58:00] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 00:01 shared
[2026-01-08 07:58:00] -rw-r--r--. 2 boincer umatlas    592403 Jan  8 00:01 input.tar.gz
[2026-01-08 07:58:00] -rw-r--r--. 1 boincer umatlas         0 Jan  8 00:01 boinc_lockfile
[2026-01-08 07:58:00] -rw-r--r--. 1 boincer umatlas      2519 Jan  8 00:01 pandaJob.out
[2026-01-08 07:58:00] -rw-------. 1 boincer umatlas        57 Jan  8 00:01 setup.sh.local
[2026-01-08 07:58:00] -rw-------. 1 boincer umatlas    989835 Jan  8 00:01 agis_schedconf.cvmfs.json
[2026-01-08 07:58:00] drwx------. 5 boincer umatlas      4096 Jan  8 00:02 pilot3
[2026-01-08 07:58:00] -rw-------. 1 boincer umatlas 223084540 Jan  8 07:56 HITS.47898826._015297.pool.root.1
[2026-01-08 07:58:00] -rw-r--r--. 1 boincer umatlas       531 Jan  8 07:56 boinc_task_state.xml
[2026-01-08 07:58:00] -rw-r--r--. 1 boincer umatlas      6958 Jan  8 07:56 init_data.xml
[2026-01-08 07:58:00] -rw-------. 1 boincer umatlas      1033 Jan  8 07:56 memory_monitor_summary.json
[2026-01-08 07:58:00] -rw-------. 1 boincer umatlas   1516240 Jan  8 07:56 agis_ddmendpoints.agis.ALL.json
[2026-01-08 07:58:00] -rw-------. 1 boincer umatlas    694594 Jan  8 07:57 log.47898826._015297.job.log.tgz.1
[2026-01-08 07:58:00] -rw-------. 1 boincer umatlas      7778 Jan  8 07:57 heartbeat.json
[2026-01-08 07:58:00] -rw-------. 1 boincer umatlas        95 Jan  8 07:57 pilot_heartbeat.json
[2026-01-08 07:58:00] -rw-------. 1 boincer umatlas      5011 Jan  8 07:57 pilotlog.txt
[2026-01-08 07:58:00] -rw-r--r--. 1 boincer umatlas        28 Jan  8 07:57 wrapper_checkpoint.txt
[2026-01-08 07:58:00] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 07:57 boinc_mmap_file
[2026-01-08 07:58:00] -rw-------. 1 boincer umatlas   3612220 Jan  8 07:57 log.47898826._015297.job.log.1
[2026-01-08 07:58:00] -rw-------. 1 boincer umatlas       357 Jan  8 07:57 output.list
[2026-01-08 07:58:00] -rw-r--r--. 1 boincer umatlas       620 Jan  8 07:57 runtime_log
[2026-01-08 07:58:00] -rw-------. 1 boincer umatlas   4321280 Jan  8 07:57 result.tar.gz
[2026-01-08 07:58:00] -rw-r--r--. 1 boincer umatlas      9345 Jan  8 07:57 runtime_log.err
[2026-01-08 07:58:00] -rw-------. 1 boincer umatlas       658 Jan  8 07:57 fNXKDmcxpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmg4dKDmXfcT7n.diag
[2026-01-08 07:58:00] -rw-r--r--. 1 boincer umatlas     21493 Jan  8 07:58 stderr.txt
[2026-01-08 07:58:00] HITS file was successfully produced:
[2026-01-08 07:58:00] -rw-------. 1 boincer umatlas 223084540 Jan  8 07:56 shared/HITS.pool.root.1
[2026-01-08 07:58:00]  *** Contents of shared directory: ***
[2026-01-08 07:58:00] total 442356
[2026-01-08 07:58:00] -rw-r--r--. 2 boincer umatlas 224946023 Jan  8 00:01 ATLAS.root_0
[2026-01-08 07:58:00] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 00:01 start_atlas.sh
[2026-01-08 07:58:00] -rw-r--r--. 2 boincer umatlas    592403 Jan  8 00:01 input.tar.gz
[2026-01-08 07:58:00] -rw-------. 1 boincer umatlas 223084540 Jan  8 07:56 HITS.pool.root.1
[2026-01-08 07:58:00] -rw-------. 1 boincer umatlas   4321280 Jan  8 07:57 result.tar.gz
07:58:01 (3351852): run_atlas exited; CPU time 48900.201903
07:58:01 (3351852): called boinc_finish(0)

</stderr_txt>
]]>

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