Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:57:31 (3477046): wrapper (7.7.26015): starting
02:57:31 (3477046): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 02:57:31] Arguments: --nthreads 4
[2026-01-11 02:57:31] Threads: 4
[2026-01-11 02:57:31] Checking for CVMFS
[2026-01-11 02:57:31] No cvmfs_config command found, will try listing directly
[2026-01-11 02:57:31] CVMFS is ok
[2026-01-11 02:57:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 02:57:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 02:57:31] Further information can be found at the LHC@home message board.
[2026-01-11 02:57:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 02:57:31] Checking for apptainer binary...
[2026-01-11 02:57:31] which: no apptainer in ((null))
[2026-01-11 02:57:31] apptainer is not installed, using version from CVMFS
[2026-01-11 02:57:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 02:57:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-01-11 02:57:31] apptainer works
[2026-01-11 02:57:31] Set ATHENA_PROC_NUMBER=4
[2026-01-11 02:57:31] Set ATHENA_CORE_NUMBER=4
[2026-01-11 02:57:31] Starting ATLAS job with PandaID=6962321582
[2026-01-11 02:57:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 06:48:47]  *** The last 200 lines of the pilot log: ***
[2026-01-11 06:48:47] 2026-01-11 05:47:03,759 | INFO     | time since job start (13757s) is within the limit (174528.0s)
[2026-01-11 06:48:47] 2026-01-11 05:47:05,764 | INFO     | time since job start (13759s) is within the limit (174528.0s)
[2026-01-11 06:48:47] 2026-01-11 05:47:05,991 | INFO     | monitor loop #929: job 0:6962321582 is in state 'finished'
[2026-01-11 06:48:47] 2026-01-11 05:47:05,991 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 06:48:47] 2026-01-11 05:47:07,769 | INFO     | time since job start (13761s) is within the limit (174528.0s)
[2026-01-11 06:48:47] 2026-01-11 05:47:08,494 | INFO     | monitor loop #930: job 0:6962321582 is in state 'finished'
[2026-01-11 06:48:47] 2026-01-11 05:47:08,494 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 06:48:47] 2026-01-11 05:47:09,774 | INFO     | time since job start (13763s) is within the limit (174528.0s)
[2026-01-11 06:48:47] 2026-01-11 05:47:10,211 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 06:48:47] 2026-01-11 05:47:10,231 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2724.8136171875008
[2026-01-11 06:48:47] 2026-01-11 05:47:10,253 | INFO     | using path: /scratch/boinc/var/slot100/slots/1/PanDA_Pilot-6962321582/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 06:48:47] 2026-01-11 05:47:10,254 | INFO     | extracted standard info from prmon json
[2026-01-11 06:48:47] 2026-01-11 05:47:10,254 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 06:48:47] 2026-01-11 05:47:10,254 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 06:48:47] 2026-01-11 05:47:10,254 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 06:48:47] 2026-01-11 05:47:10,254 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 06:48:47] 2026-01-11 05:47:10,258 | INFO     | fitting pss+swap vs Time
[2026-01-11 06:48:47] 2026-01-11 05:47:10,259 | INFO     | sum of square deviations: 3531973200.0
[2026-01-11 06:48:47] 2026-01-11 05:47:10,260 | INFO     | sum of deviations: 24830703248.999996
[2026-01-11 06:48:47] 2026-01-11 05:47:10,260 | INFO     | mean x: 1768103534.0
[2026-01-11 06:48:47] 2026-01-11 05:47:10,260 | INFO     | mean y: 2315828.5822222224
[2026-01-11 06:48:47] 2026-01-11 05:47:10,260 | INFO     | intersect: -12427918400.3361
[2026-01-11 06:48:47] 2026-01-11 05:47:10,261 | INFO     | chi2: 1.30147564452722
[2026-01-11 06:48:47] 2026-01-11 05:47:10,261 | INFO     | sum of square deviations: 3301699115.0
[2026-01-11 06:48:47] 2026-01-11 05:47:10,262 | INFO     | sum of deviations: 24158266119.5
[2026-01-11 06:48:47] 2026-01-11 05:47:10,262 | INFO     | mean x: 1768103381.5
[2026-01-11 06:48:47] 2026-01-11 05:47:10,263 | INFO     | mean y: 2315383.1863636365
[2026-01-11 06:48:47] 2026-01-11 05:47:10,263 | INFO     | intersect: -12934754449.436722
[2026-01-11 06:48:47] 2026-01-11 05:47:10,263 | INFO     | chi2: 1.302105781185531
[2026-01-11 06:48:47] 2026-01-11 05:47:10,263 | INFO     | current chi2=1.302105781185531 (change=-0.048417091857291455 %)
[2026-01-11 06:48:47] 2026-01-11 05:47:10,263 | INFO     | right removable region: 219
[2026-01-11 06:48:47] 2026-01-11 05:47:10,263 | INFO     | sum of square deviations: 3301699115.0
[2026-01-11 06:48:47] 2026-01-11 05:47:10,265 | INFO     | sum of deviations: -2511882247.4999986
[2026-01-11 06:48:47] 2026-01-11 05:47:10,265 | INFO     | mean x: 1768103686.5
[2026-01-11 06:48:47] 2026-01-11 05:47:10,265 | INFO     | mean y: 2333716.6954545453
[2026-01-11 06:48:47] 2026-01-11 05:47:10,265 | INFO     | intersect: 1347479990.5280576
[2026-01-11 06:48:47] 2026-01-11 05:47:10,265 | INFO     | chi2: 0.016868184923222212
[2026-01-11 06:48:47] 2026-01-11 05:47:10,265 | INFO     | current chi2=0.016868184923222212 (change=98.70391851018083 %)
[2026-01-11 06:48:47] 2026-01-11 05:47:10,266 | INFO     | sum of square deviations: 3081657780.0
[2026-01-11 06:48:47] 2026-01-11 05:47:10,267 | INFO     | sum of deviations: -415467584.0000006
[2026-01-11 06:48:47] 2026-01-11 05:47:10,267 | INFO     | mean x: 1768103839.0
[2026-01-11 06:48:47] 2026-01-11 05:47:10,267 | INFO     | mean y: 2332260.5581395347
[2026-01-11 06:48:47] 2026-01-11 05:47:10,267 | INFO     | intersect: 240707149.23590052
[2026-01-11 06:48:47] 2026-01-11 05:47:10,267 | INFO     | chi2: 0.01349839346985455
[2026-01-11 06:48:47] 2026-01-11 05:47:10,268 | INFO     | current chi2=0.01349839346985455 (change=19.977202459575324 %)
[2026-01-11 06:48:47] 2026-01-11 05:47:10,268 | INFO     | left removable region: 20
[2026-01-11 06:48:47] 2026-01-11 05:47:10,268 | INFO     | sum of square deviations: 2443580700.0
[2026-01-11 06:48:47] 2026-01-11 05:47:10,269 | INFO     | sum of deviations: 3551266340.9999995
[2026-01-11 06:48:47] 2026-01-11 05:47:10,269 | INFO     | mean x: 1768103961.0
[2026-01-11 06:48:47] 2026-01-11 05:47:10,269 | INFO     | mean y: 2328984.050251256
[2026-01-11 06:48:47] 2026-01-11 05:47:10,269 | INFO     | intersect: -2567264106.9772215
[2026-01-11 06:48:47] 2026-01-11 05:47:10,270 | INFO     | chi2: 0.0006884041177744635
[2026-01-11 06:48:47] 2026-01-11 05:47:10,270 | INFO     | current memory leak: 1.45 B/s (using 199 data points, chi2=0.00)
[2026-01-11 06:48:47] 2026-01-11 05:47:10,270 | INFO     | could have reported an average CPU frequency of 2658 MHz (11 samples)
[2026-01-11 06:48:47] 2026-01-11 05:47:10,270 | INFO     | ..............................
[2026-01-11 06:48:47] 2026-01-11 05:47:10,270 | INFO     | . Timing measurements:
[2026-01-11 06:48:47] 2026-01-11 05:47:10,270 | INFO     | . get job = 0 s
[2026-01-11 06:48:47] 2026-01-11 05:47:10,270 | INFO     | . initial setup = 1 s
[2026-01-11 06:48:47] 2026-01-11 05:47:10,270 | INFO     | . payload setup = 9 s
[2026-01-11 06:48:47] 2026-01-11 05:47:10,271 | INFO     | . stage-in = 0 s
[2026-01-11 06:48:47] 2026-01-11 05:47:10,271 | INFO     | . payload execution = 13719 s
[2026-01-11 06:48:47] 2026-01-11 05:47:10,271 | INFO     | . stage-out = 1 s
[2026-01-11 06:48:47] 2026-01-11 05:47:10,271 | INFO     | . log creation = 0 s
[2026-01-11 06:48:47] 2026-01-11 05:47:10,271 | INFO     | ..............................
[2026-01-11 06:48:47] 2026-01-11 05:47:10,357 | INFO     | 
[2026-01-11 06:48:47] 2026-01-11 05:47:10,357 | INFO     | job summary report
[2026-01-11 06:48:47] 2026-01-11 05:47:10,357 | INFO     | --------------------------------------------------
[2026-01-11 06:48:47] 2026-01-11 05:47:10,357 | INFO     | PanDA job id: 6962321582
[2026-01-11 06:48:47] 2026-01-11 05:47:10,357 | INFO     | task id: 47898826
[2026-01-11 06:48:47] 2026-01-11 05:47:10,357 | INFO     | errors: (none)
[2026-01-11 06:48:47] 2026-01-11 05:47:10,357 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 06:48:47] 2026-01-11 05:47:10,357 | INFO     | pilot state: finished 
[2026-01-11 06:48:47] 2026-01-11 05:47:10,358 | INFO     | transexitcode: 0
[2026-01-11 06:48:47] 2026-01-11 05:47:10,358 | INFO     | exeerrorcode: 0
[2026-01-11 06:48:47] 2026-01-11 05:47:10,358 | INFO     | exeerrordiag: 
[2026-01-11 06:48:47] 2026-01-11 05:47:10,358 | INFO     | exitcode: 0
[2026-01-11 06:48:47] 2026-01-11 05:47:10,358 | INFO     | exitmsg: OK
[2026-01-11 06:48:47] 2026-01-11 05:47:10,358 | INFO     | cpuconsumptiontime: 52802 s
[2026-01-11 06:48:47] 2026-01-11 05:47:10,358 | INFO     | nevents: 400
[2026-01-11 06:48:47] 2026-01-11 05:47:10,358 | INFO     | neventsw: 0
[2026-01-11 06:48:47] 2026-01-11 05:47:10,358 | INFO     | pid: 3489076
[2026-01-11 06:48:47] 2026-01-11 05:47:10,358 | INFO     | pgrp: 3489076
[2026-01-11 06:48:47] 2026-01-11 05:47:10,358 | INFO     | corecount: 4
[2026-01-11 06:48:47] 2026-01-11 05:47:10,359 | INFO     | event service: False
[2026-01-11 06:48:47] 2026-01-11 05:47:10,359 | INFO     | sizes: {0: 2283810, 1: 2284009, 8: 2284271, 11: 2284299, 13733: 2315269, 13735: 2324475, 13746: 2324613}
[2026-01-11 06:48:47] 2026-01-11 05:47:10,359 | INFO     | --------------------------------------------------
[2026-01-11 06:48:47] 2026-01-11 05:47:10,359 | INFO     | 
[2026-01-11 06:48:47] 2026-01-11 05:47:10,359 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/1
[2026-01-11 06:48:47] 2026-01-11 05:47:10,387 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 06:48:47] 2026-01-11 05:47:10,388 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 06:48:47] 2026-01-11 05:47:10,388 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 06:48:47] 2026-01-11 05:47:10,388 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 06:48:47] 2026-01-11 05:47:10,388 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 06:48:47] 2026-01-11 05:47:10,388 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 06:48:47] 2026-01-11 05:47:10,388 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 06:48:47] 2026-01-11 05:47:10,388 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 06:48:47] 2026-01-11 05:47:10,388 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 06:48:47] 2026-01-11 05:47:10,388 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 06:48:47] 2026-01-11 05:47:10,388 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 06:48:47] 2026-01-11 05:47:10,389 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 06:48:47] 2026-01-11 05:47:10,389 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 06:48:47] 2026-01-11 05:47:10,389 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 06:48:47] 2026-01-11 05:47:10,389 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 06:48:47] 2026-01-11 05:47:10,389 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 06:48:47] 2026-01-11 05:47:10,389 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 06:48:47] 2026-01-11 05:47:10,389 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 06:48:47] 2026-01-11 05:47:10,389 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 06:48:47] 2026-01-11 05:47:10,389 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 06:48:47] 2026-01-11 05:47:10,389 | INFO     | job 6962321582 has completed (purged errors)
[2026-01-11 06:48:47] 2026-01-11 05:47:10,390 | INFO     | overall cleanup function is called
[2026-01-11 06:48:47] 2026-01-11 05:47:11,398 | INFO     | --- collectZombieJob: --- 10, [3489076]
[2026-01-11 06:48:47] 2026-01-11 05:47:11,398 | INFO     | zombie collector waiting for pid 3489076
[2026-01-11 06:48:47] 2026-01-11 05:47:11,398 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 06:48:47] 2026-01-11 05:47:11,398 | INFO     | collected zombie processes
[2026-01-11 06:48:47] 2026-01-11 05:47:11,398 | INFO     | will attempt to kill all subprocesses of pid=3489076
[2026-01-11 06:48:47] 2026-01-11 05:47:12,029 | INFO     | process IDs to be killed: [3489076] (in reverse order)
[2026-01-11 06:48:47] 2026-01-11 05:47:12,261 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 06:48:47] 2026-01-11 05:47:12,262 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 06:48:47] 2026-01-11 05:47:12,290 | INFO     | did not find any defunct processes belonging to 3489076
[2026-01-11 06:48:47] 2026-01-11 05:47:12,316 | INFO     | did not find any defunct processes belonging to 3489076
[2026-01-11 06:48:47] 2026-01-11 05:47:12,316 | INFO     | ready for new job
[2026-01-11 06:48:47] 2026-01-11 05:47:12,316 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 06:48:47] 2026-01-11 05:47:12,318 | INFO     | ***************************************
[2026-01-11 06:48:47] 2026-01-11 05:47:12,319 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 06:48:47] 2026-01-11 05:47:12,319 | INFO     | ***************************************
[2026-01-11 06:48:47] 2026-01-11 05:47:12,319 | INFO     | 
[2026-01-11 06:48:47] 2026-01-11 05:47:12,326 | INFO     | architecture information:
[2026-01-11 06:48:47] 2026-01-11 05:47:12,327 | INFO     | executing command: cat /etc/os-release
[2026-01-11 06:48:47] 2026-01-11 05:47:12,351 | INFO     | cat /etc/os-release:
[2026-01-11 06:48:47] NAME="CentOS Linux"
[2026-01-11 06:48:47] VERSION="7 (Core)"
[2026-01-11 06:48:47] ID="centos"
[2026-01-11 06:48:47] ID_LIKE="rhel fedora"
[2026-01-11 06:48:47] VERSION_ID="7"
[2026-01-11 06:48:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 06:48:47] ANSI_COLOR="0;31"
[2026-01-11 06:48:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 06:48:47] HOME_URL="https://www.centos.org/"
[2026-01-11 06:48:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 06:48:47] 
[2026-01-11 06:48:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 06:48:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 06:48:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 06:48:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 06:48:47] 
[2026-01-11 06:48:47] 2026-01-11 05:47:12,351 | INFO     | ***************************************
[2026-01-11 06:48:47] 2026-01-11 05:47:12,853 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/1
[2026-01-11 06:48:47] 2026-01-11 05:47:12,873 | INFO     | sufficient remaining disk space (3349378236416 B)
[2026-01-11 06:48:47] 2026-01-11 05:47:12,874 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 06:48:47] 2026-01-11 05:47:12,874 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 06:48:47] 2026-01-11 05:47:12,874 | INFO     | update_server=False
[2026-01-11 06:48:47] 2026-01-11 05:47:12,874 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 06:48:47] 2026-01-11 05:47:12,874 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 06:48:47] 2026-01-11 05:47:12,874 | INFO     | aborting loop
[2026-01-11 06:48:47] 2026-01-11 05:47:12,874 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 06:48:47] 2026-01-11 05:47:13,096 | INFO     | all data control threads have been joined
[2026-01-11 06:48:47] 2026-01-11 05:47:13,114 | INFO     | all job control threads have been joined
[2026-01-11 06:48:47] 2026-01-11 05:47:13,555 | INFO     | all payload control threads have been joined
[2026-01-11 06:48:47] 2026-01-11 05:47:13,879 | INFO     | [job] retrieve thread has finished
[2026-01-11 06:48:47] 2026-01-11 05:47:13,880 | INFO     | [job] job monitor thread has finished
[2026-01-11 06:48:47] 2026-01-11 05:47:14,101 | INFO     | [data] control thread has finished
[2026-01-11 06:48:47] 2026-01-11 05:47:14,119 | INFO     | [job] control thread has finished
[2026-01-11 06:48:47] 2026-01-11 05:47:14,165 | INFO     | [job] validate thread has finished
[2026-01-11 06:48:47] 2026-01-11 05:47:14,370 | INFO     | [payload] failed_post thread has finished
[2026-01-11 06:48:47] 2026-01-11 05:47:14,494 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 06:48:47] 2026-01-11 05:47:14,560 | INFO     | [payload] control thread has finished
[2026-01-11 06:48:47] 2026-01-11 05:47:14,562 | INFO     | [payload] validate_post thread has finished
[2026-01-11 06:48:47] 2026-01-11 05:47:14,618 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 06:48:47] 2026-01-11 05:47:14,867 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 06:48:47] 2026-01-11 05:47:14,880 | INFO     | [data] copytool_out thread has finished
[2026-01-11 06:48:47] 2026-01-11 05:47:14,895 | INFO     | [data] copytool_in thread has finished
[2026-01-11 06:48:47] 2026-01-11 05:47:14,972 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 06:48:47] 2026-01-11 05:47:15,366 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 06:48:47] 2026-01-11 05:47:16,371 | INFO     | [job] queue monitor thread has finished
[2026-01-11 06:48:47] 2026-01-11 05:47:18,624 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 06:48:47] 2026-01-11 05:47:23,818 | INFO     | job.realtimelogging is not enabled
[2026-01-11 06:48:47] 2026-01-11 05:47:24,819 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 06:48:47] 2026-01-11 05:47:43,792 | INFO     | PID=3481125 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 06:48:47] 2026-01-11 05:47:43,792 | INFO     | .. there are 10 such processes running
[2026-01-11 06:48:47] 2026-01-11 05:47:43,793 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 06:48:47] 2026-01-11 05:47:43,793 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 06:48:47] 2026-01-11 05:47:43,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 06:48:47] 2026-01-11 05:48:08,892 | INFO     | [monitor] cgroup control has ended
[2026-01-11 06:48:47] 2026-01-11 05:48:09,606 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23252496561984)>', '<ExcThread(monitor, started 23252258752256)>']
[2026-01-11 06:48:47] 2026-01-11 05:48:09,923 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 06:48:47] 2026-01-11 05:48:09,923 | INFO     | [monitor] control thread has ended
[2026-01-11 06:48:47] 2026-01-11 05:48:14,631 | INFO     | all workflow threads have been joined
[2026-01-11 06:48:47] 2026-01-11 05:48:14,631 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 06:48:47] 2026-01-11 05:48:14,631 | INFO     | traces error code: 0
[2026-01-11 06:48:47] 2026-01-11 05:48:14,631 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 06:48:47] 2026-01-11 05:48:14,766 [wrapper] ==== pilot stdout END ====
[2026-01-11 06:48:47] 2026-01-11 05:48:14,771 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 06:48:47] 2026-01-11 05:48:14,775 [wrapper] pilotpid: 3481125
[2026-01-11 06:48:47] 2026-01-11 05:48:14,779 [wrapper] Pilot exit status: 0
[2026-01-11 06:48:47] 2026-01-11 05:48:14,793 [wrapper] pandaids: 6962321582
[2026-01-11 06:48:47] 2026-01-11 05:48:14,961 [wrapper] cleanup supervisor_pilot 3965315 3481126
[2026-01-11 06:48:47] 2026-01-11 05:48:14,965 [wrapper] Test setup, not cleaning
[2026-01-11 06:48:47] 2026-01-11 05:48:14,970 [wrapper] apfmon messages muted
[2026-01-11 06:48:47] 2026-01-11 05:48:14,974 [wrapper] ==== wrapper stdout END ====
[2026-01-11 06:48:47] 2026-01-11 05:48:14,978 [wrapper] ==== wrapper stderr END ====
[2026-01-11 06:48:47]  *** Error codes and diagnostics ***
[2026-01-11 06:48:47]     "exeErrorCode": 0,
[2026-01-11 06:48:47]     "exeErrorDiag": "",
[2026-01-11 06:48:47]     "pilotErrorCode": 0,
[2026-01-11 06:48:47]     "pilotErrorDiag": "",
[2026-01-11 06:48:47]  *** Listing of results directory ***
[2026-01-11 06:48:47] total 441464
[2026-01-11 06:48:47] -rw-r--r-- 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-11 06:48:47] -rwx------ 1 boinc boinc     36322 Jan  7 22:06 runpilot2-wrapper.sh
[2026-01-11 06:48:47] -rw-r--r-- 1 boinc boinc      5112 Jan  7 22:11 queuedata.json
[2026-01-11 06:48:47] -rw-r--r-- 1 boinc boinc       100 Jan 11 02:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 06:48:47] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 02:57 run_atlas
[2026-01-11 06:48:47] -rw-r--r-- 1 boinc boinc       105 Jan 11 02:57 job.xml
[2026-01-11 06:48:47] -rw-r--r-- 1 boinc boinc      6692 Jan 11 02:57 init_data.xml
[2026-01-11 06:48:47] -rw-r--r-- 2 boinc boinc 224870433 Jan 11 02:57 EVNT.47898824._000690.pool.root.1
[2026-01-11 06:48:47] -rw-r--r-- 2 boinc boinc     15847 Jan 11 02:57 start_atlas.sh
[2026-01-11 06:48:47] drwxrwx--x 2 boinc boinc      4096 Jan 11 02:57 shared
[2026-01-11 06:48:47] -rw-r--r-- 2 boinc boinc    592401 Jan 11 02:57 input.tar.gz
[2026-01-11 06:48:47] -rw-r--r-- 1 boinc boinc         0 Jan 11 02:57 boinc_lockfile
[2026-01-11 06:48:47] -rw-r--r-- 1 boinc boinc      2519 Jan 11 02:57 pandaJob.out
[2026-01-11 06:48:47] -rw------- 1 boinc boinc    989545 Jan 11 02:57 agis_schedconf.cvmfs.json
[2026-01-11 06:48:47] drwx------ 5 boinc boinc      4096 Jan 11 02:57 pilot3
[2026-01-11 06:48:47] -rw------- 1 boinc boinc 218663931 Jan 11 06:46 HITS.47898826._014783.pool.root.1
[2026-01-11 06:48:47] -rw-r--r-- 1 boinc boinc       529 Jan 11 06:46 boinc_task_state.xml
[2026-01-11 06:48:47] -rw------- 1 boinc boinc      1030 Jan 11 06:46 memory_monitor_summary.json
[2026-01-11 06:48:47] -rw------- 1 boinc boinc   1516240 Jan 11 06:46 agis_ddmendpoints.agis.ALL.json
[2026-01-11 06:48:47] -rw------- 1 boinc boinc    403088 Jan 11 06:46 log.47898826._014783.job.log.tgz.1
[2026-01-11 06:48:47] -rw------- 1 boinc boinc      7789 Jan 11 06:47 heartbeat.json
[2026-01-11 06:48:47] -rw------- 1 boinc boinc        95 Jan 11 06:47 pilot_heartbeat.json
[2026-01-11 06:48:47] -rw------- 1 boinc boinc      4908 Jan 11 06:48 pilotlog.txt
[2026-01-11 06:48:47] -rw------- 1 boinc boinc   1898482 Jan 11 06:48 log.47898826._014783.job.log.1
[2026-01-11 06:48:47] -rw------- 1 boinc boinc       357 Jan 11 06:48 output.list
[2026-01-11 06:48:47] -rw-r--r-- 1 boinc boinc       620 Jan 11 06:48 runtime_log
[2026-01-11 06:48:47] -rw------- 1 boinc boinc   2324480 Jan 11 06:48 result.tar.gz
[2026-01-11 06:48:47] -rw-r--r-- 1 boinc boinc      9223 Jan 11 06:48 runtime_log.err
[2026-01-11 06:48:47] -rw------- 1 boinc boinc       666 Jan 11 06:48 T95LDmJupx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmIrdKDmjiImFo.diag
[2026-01-11 06:48:47] -rw-r--r-- 1 boinc boinc        26 Jan 11 06:48 wrapper_checkpoint.txt
[2026-01-11 06:48:47] -rw-r--r-- 1 boinc boinc      8192 Jan 11 06:48 boinc_mmap_file
[2026-01-11 06:48:47] -rw-r--r-- 1 boinc boinc     21096 Jan 11 06:48 stderr.txt
[2026-01-11 06:48:47] HITS file was successfully produced:
[2026-01-11 06:48:47] -rw------- 1 boinc boinc 218663931 Jan 11 06:46 shared/HITS.pool.root.1
[2026-01-11 06:48:47]  *** Contents of shared directory: ***
[2026-01-11 06:48:47] total 436020
[2026-01-11 06:48:47] -rw-r--r-- 2 boinc boinc 224870433 Jan 11 02:57 ATLAS.root_0
[2026-01-11 06:48:47] -rw-r--r-- 2 boinc boinc     15847 Jan 11 02:57 start_atlas.sh
[2026-01-11 06:48:47] -rw-r--r-- 2 boinc boinc    592401 Jan 11 02:57 input.tar.gz
[2026-01-11 06:48:47] -rw------- 1 boinc boinc 218663931 Jan 11 06:46 HITS.pool.root.1
[2026-01-11 06:48:47] -rw------- 1 boinc boinc   2324480 Jan 11 06:48 result.tar.gz
06:48:48 (3477046): run_atlas exited; CPU time 53771.895466
06:48:48 (3477046): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN