Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:06 (1143826): wrapper (7.7.26015): starting
00:03:06 (1143826): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 00:03:06] Arguments: --nthreads 12
[2026-01-08 00:03:06] Threads: 12
[2026-01-08 00:03:06] Checking for CVMFS
[2026-01-08 00:03:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 00:03:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 00:03:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 00:03:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 00:03:08] 2.13.3.0 11883 91390 376040 154891 0 341 32745323 32935937 20290 16776704 0 359678396 99.499 479122125 33740 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 00:03:08] CVMFS is ok
[2026-01-08 00:03:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 00:03:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 00:03:08] Further information can be found at the LHC@home message board.
[2026-01-08 00:03:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 00:03:08] Checking for apptainer binary...
[2026-01-08 00:03:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 00:03:08] Running /usr/bin/apptainer --version
[2026-01-08 00:03:09] apptainer version 1.4.5-2.el9
[2026-01-08 00:03:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 00:03:09] c6-12-29-2.aglt2.org
[2026-01-08 00:03:09] apptainer works
[2026-01-08 00:03:09] Set ATHENA_PROC_NUMBER=12
[2026-01-08 00:03:09] Set ATHENA_CORE_NUMBER=12
[2026-01-08 00:03:10] Starting ATLAS job with PandaID=6962315505
[2026-01-08 00:03:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 03:51:05]  *** The last 200 lines of the pilot log: ***
[2026-01-08 03:51:05] 2026-01-08 08:50:28,304 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2574.9294999999997
[2026-01-08 03:51:05] 2026-01-08 08:50:28,324 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6962315505/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 03:51:05] 2026-01-08 08:50:28,325 | INFO     | extracted standard info from prmon json
[2026-01-08 03:51:05] 2026-01-08 08:50:28,325 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 03:51:05] 2026-01-08 08:50:28,325 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 03:51:05] 2026-01-08 08:50:28,338 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 03:51:05] 2026-01-08 08:50:28,338 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 03:51:05] 2026-01-08 08:50:28,360 | INFO     | fitting pss+swap vs Time
[2026-01-08 03:51:05] 2026-01-08 08:50:28,360 | INFO     | sum of square deviations: 3301770085.3454576
[2026-01-08 03:51:05] 2026-01-08 08:50:28,362 | INFO     | sum of deviations: 27542369762.32731
[2026-01-08 03:51:05] 2026-01-08 08:50:28,362 | INFO     | mean x: 1767855489.8545454
[2026-01-08 03:51:05] 2026-01-08 08:50:28,362 | INFO     | mean y: 2662690.0727272728
[2026-01-08 03:51:05] 2026-01-08 08:50:28,362 | INFO     | intersect: -14744254366.33998
[2026-01-08 03:51:05] 2026-01-08 08:50:28,383 | INFO     | chi2: 3.571488847039746
[2026-01-08 03:51:05] 2026-01-08 08:50:28,383 | INFO     | sum of square deviations: 3081752539.7023377
[2026-01-08 03:51:05] 2026-01-08 08:50:28,385 | INFO     | sum of deviations: 57808015666.953445
[2026-01-08 03:51:05] 2026-01-08 08:50:28,385 | INFO     | mean x: 1767855337.3627906
[2026-01-08 03:51:05] 2026-01-08 08:50:28,385 | INFO     | mean y: 2683371.7441860465
[2026-01-08 03:51:05] 2026-01-08 08:50:28,385 | INFO     | intersect: -33159034748.89585
[2026-01-08 03:51:05] 2026-01-08 08:50:28,386 | INFO     | chi2: 2.0452689429605817
[2026-01-08 03:51:05] 2026-01-08 08:50:28,386 | INFO     | current chi2=2.0452689429605817 (change=42.733436094702704 %)
[2026-01-08 03:51:05] 2026-01-08 08:50:28,386 | INFO     | sum of square deviations: 2871708828.9952292
[2026-01-08 03:51:05] 2026-01-08 08:50:28,406 | INFO     | sum of deviations: 56408053057.72858
[2026-01-08 03:51:05] 2026-01-08 08:50:28,406 | INFO     | mean x: 1767855184.8619049
[2026-01-08 03:51:05] 2026-01-08 08:50:28,406 | INFO     | mean y: 2682355.1285714284
[2026-01-08 03:51:05] 2026-01-08 08:50:28,406 | INFO     | intersect: -34722728542.80079
[2026-01-08 03:51:05] 2026-01-08 08:50:28,406 | INFO     | chi2: 2.045843083774137
[2026-01-08 03:51:05] 2026-01-08 08:50:28,407 | INFO     | current chi2=2.045843083774137 (change=-0.028071653634179315 %)
[2026-01-08 03:51:05] 2026-01-08 08:50:28,407 | INFO     | right removable region: 209
[2026-01-08 03:51:05] 2026-01-08 08:50:28,407 | INFO     | sum of square deviations: 3081704959.7023377
[2026-01-08 03:51:05] 2026-01-08 08:50:28,408 | INFO     | sum of deviations: -20832948777.25116
[2026-01-08 03:51:05] 2026-01-08 08:50:28,427 | INFO     | mean x: 1767855642.3627906
[2026-01-08 03:51:05] 2026-01-08 08:50:28,427 | INFO     | mean y: 2695975.618604651
[2026-01-08 03:51:05] 2026-01-08 08:50:28,427 | INFO     | intersect: 11953757652.35869
[2026-01-08 03:51:05] 2026-01-08 08:50:28,428 | INFO     | chi2: 1.614207479095502
[2026-01-08 03:51:05] 2026-01-08 08:50:28,428 | INFO     | current chi2=1.614207479095502 (change=54.802953383616206 %)
[2026-01-08 03:51:05] 2026-01-08 08:50:28,428 | INFO     | sum of square deviations: 2871640021.5285673
[2026-01-08 03:51:05] 2026-01-08 08:50:28,429 | INFO     | sum of deviations: -24369503818.51429
[2026-01-08 03:51:05] 2026-01-08 08:50:28,430 | INFO     | mean x: 1767855794.8714285
[2026-01-08 03:51:05] 2026-01-08 08:50:28,430 | INFO     | mean y: 2698500.980952381
[2026-01-08 03:51:05] 2026-01-08 08:50:28,430 | INFO     | intersect: 15005194712.455803
[2026-01-08 03:51:05] 2026-01-08 08:50:28,430 | INFO     | chi2: 1.5785796247654909
[2026-01-08 03:51:05] 2026-01-08 08:50:28,430 | INFO     | current chi2=1.5785796247654909 (change=2.2071421915338174 %)
[2026-01-08 03:51:05] 2026-01-08 08:50:28,430 | INFO     | left removable region: 20
[2026-01-08 03:51:05] 2026-01-08 08:50:28,449 | INFO     | sum of square deviations: 2093401499.4391594
[2026-01-08 03:51:05] 2026-01-08 08:50:28,450 | INFO     | sum of deviations: 1652373241.396825
[2026-01-08 03:51:05] 2026-01-08 08:50:28,450 | INFO     | mean x: 1767855764.4021163
[2026-01-08 03:51:05] 2026-01-08 08:50:28,450 | INFO     | mean y: 2724231.507936508
[2026-01-08 03:51:05] 2026-01-08 08:50:28,450 | INFO     | intersect: -1392687762.0966303
[2026-01-08 03:51:05] 2026-01-08 08:50:28,451 | INFO     | chi2: 0.0012789726136372874
[2026-01-08 03:51:05] 2026-01-08 08:50:28,451 | INFO     | current memory leak: 0.79 B/s (using 189 data points, chi2=0.00)
[2026-01-08 03:51:05] 2026-01-08 08:50:28,451 | INFO     | could have reported an average CPU frequency of 2570 MHz (11 samples)
[2026-01-08 03:51:05] 2026-01-08 08:50:28,452 | INFO     | ..............................
[2026-01-08 03:51:05] 2026-01-08 08:50:28,452 | INFO     | . Timing measurements:
[2026-01-08 03:51:05] 2026-01-08 08:50:28,452 | INFO     | . get job = 0 s
[2026-01-08 03:51:05] 2026-01-08 08:50:28,452 | INFO     | . initial setup = 8 s
[2026-01-08 03:51:05] 2026-01-08 08:50:28,452 | INFO     | . payload setup = 47 s
[2026-01-08 03:51:05] 2026-01-08 08:50:28,452 | INFO     | . stage-in = 0 s
[2026-01-08 03:51:05] 2026-01-08 08:50:28,452 | INFO     | . payload execution = 13398 s
[2026-01-08 03:51:05] 2026-01-08 08:50:28,452 | INFO     | . stage-out = 8 s
[2026-01-08 03:51:05] 2026-01-08 08:50:28,452 | INFO     | . log creation = 1 s
[2026-01-08 03:51:05] 2026-01-08 08:50:28,452 | INFO     | ..............................
[2026-01-08 03:51:05] 2026-01-08 08:50:29,110 | INFO     | 
[2026-01-08 03:51:05] 2026-01-08 08:50:29,110 | INFO     | job summary report
[2026-01-08 03:51:05] 2026-01-08 08:50:29,115 | INFO     | --------------------------------------------------
[2026-01-08 03:51:05] 2026-01-08 08:50:29,115 | INFO     | PanDA job id: 6962315505
[2026-01-08 03:51:05] 2026-01-08 08:50:29,115 | INFO     | task id: 47898826
[2026-01-08 03:51:05] 2026-01-08 08:50:29,115 | INFO     | errors: (none)
[2026-01-08 03:51:05] 2026-01-08 08:50:29,115 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 03:51:05] 2026-01-08 08:50:29,115 | INFO     | pilot state: finished 
[2026-01-08 03:51:05] 2026-01-08 08:50:29,115 | INFO     | transexitcode: 0
[2026-01-08 03:51:05] 2026-01-08 08:50:29,115 | INFO     | exeerrorcode: 0
[2026-01-08 03:51:05] 2026-01-08 08:50:29,115 | INFO     | exeerrordiag: 
[2026-01-08 03:51:05] 2026-01-08 08:50:29,116 | INFO     | exitcode: 0
[2026-01-08 03:51:05] 2026-01-08 08:50:29,116 | INFO     | exitmsg: OK
[2026-01-08 03:51:05] 2026-01-08 08:50:29,116 | INFO     | cpuconsumptiontime: 61794 s
[2026-01-08 03:51:05] 2026-01-08 08:50:29,116 | INFO     | nevents: 400
[2026-01-08 03:51:05] 2026-01-08 08:50:29,116 | INFO     | neventsw: 0
[2026-01-08 03:51:05] 2026-01-08 08:50:29,116 | INFO     | pid: 1158081
[2026-01-08 03:51:05] 2026-01-08 08:50:29,116 | INFO     | pgrp: 1158081
[2026-01-08 03:51:05] 2026-01-08 08:50:29,116 | INFO     | corecount: 12
[2026-01-08 03:51:05] 2026-01-08 08:50:29,116 | INFO     | event service: False
[2026-01-08 03:51:05] 2026-01-08 08:50:29,116 | INFO     | sizes: {0: 2283741, 1: 2283797, 2: 2283853, 3: 2284052, 14: 2284052, 25: 2284080, 36: 2284526, 13450: 2314556, 13460: 2323554, 13462: 2323610, 13497: 2323804}
[2026-01-08 03:51:05] 2026-01-08 08:50:29,116 | INFO     | --------------------------------------------------
[2026-01-08 03:51:05] 2026-01-08 08:50:29,116 | INFO     | 
[2026-01-08 03:51:05] 2026-01-08 08:50:29,117 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-08 03:51:05] 2026-01-08 08:50:29,234 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 03:51:05] 2026-01-08 08:50:29,234 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 03:51:05] 2026-01-08 08:50:29,234 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 03:51:05] 2026-01-08 08:50:29,234 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 03:51:05] 2026-01-08 08:50:29,235 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 03:51:05] 2026-01-08 08:50:29,235 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 03:51:05] 2026-01-08 08:50:29,235 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 03:51:05] 2026-01-08 08:50:29,235 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 03:51:05] 2026-01-08 08:50:29,235 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 03:51:05] 2026-01-08 08:50:29,235 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 03:51:05] 2026-01-08 08:50:29,235 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 03:51:05] 2026-01-08 08:50:29,235 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 03:51:05] 2026-01-08 08:50:29,235 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 03:51:05] 2026-01-08 08:50:29,235 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 03:51:05] 2026-01-08 08:50:29,235 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 03:51:05] 2026-01-08 08:50:29,235 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 03:51:05] 2026-01-08 08:50:29,236 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 03:51:05] 2026-01-08 08:50:29,236 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 03:51:05] 2026-01-08 08:50:29,236 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 03:51:05] 2026-01-08 08:50:29,236 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 03:51:05] 2026-01-08 08:50:29,236 | INFO     | job 6962315505 has completed (purged errors)
[2026-01-08 03:51:05] 2026-01-08 08:50:29,236 | INFO     | overall cleanup function is called
[2026-01-08 03:51:05] 2026-01-08 08:50:30,247 | INFO     | --- collectZombieJob: --- 10, [1158081]
[2026-01-08 03:51:05] 2026-01-08 08:50:30,247 | INFO     | zombie collector waiting for pid 1158081
[2026-01-08 03:51:05] 2026-01-08 08:50:30,247 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 03:51:05] 2026-01-08 08:50:30,247 | INFO     | collected zombie processes
[2026-01-08 03:51:05] 2026-01-08 08:50:30,247 | INFO     | will attempt to kill all subprocesses of pid=1158081
[2026-01-08 03:51:05] 2026-01-08 08:50:32,429 | INFO     | process IDs to be killed: [1158081] (in reverse order)
[2026-01-08 03:51:05] 2026-01-08 08:50:32,667 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 03:51:05] 2026-01-08 08:50:32,667 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 03:51:05] 2026-01-08 08:50:32,714 | INFO     | did not find any defunct processes belonging to 1158081
[2026-01-08 03:51:05] 2026-01-08 08:50:32,768 | INFO     | did not find any defunct processes belonging to 1158081
[2026-01-08 03:51:05] 2026-01-08 08:50:32,768 | INFO     | ready for new job
[2026-01-08 03:51:05] 2026-01-08 08:50:32,768 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 03:51:05] 2026-01-08 08:50:32,795 | INFO     | ***************************************
[2026-01-08 03:51:05] 2026-01-08 08:50:32,796 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 03:51:05] 2026-01-08 08:50:32,796 | INFO     | ***************************************
[2026-01-08 03:51:05] 2026-01-08 08:50:32,796 | INFO     | 
[2026-01-08 03:51:05] 2026-01-08 08:50:32,809 | INFO     | architecture information:
[2026-01-08 03:51:05] 2026-01-08 08:50:32,819 | INFO     | executing command: cat /etc/os-release
[2026-01-08 03:51:05] 2026-01-08 08:50:32,916 | INFO     | cat /etc/os-release:
[2026-01-08 03:51:05] NAME="CentOS Linux"
[2026-01-08 03:51:05] VERSION="7 (Core)"
[2026-01-08 03:51:05] ID="centos"
[2026-01-08 03:51:05] ID_LIKE="rhel fedora"
[2026-01-08 03:51:05] VERSION_ID="7"
[2026-01-08 03:51:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 03:51:05] ANSI_COLOR="0;31"
[2026-01-08 03:51:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 03:51:05] HOME_URL="https://www.centos.org/"
[2026-01-08 03:51:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 03:51:05] 
[2026-01-08 03:51:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 03:51:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 03:51:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 03:51:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 03:51:05] 
[2026-01-08 03:51:05] 2026-01-08 08:50:32,916 | INFO     | ***************************************
[2026-01-08 03:51:05] 2026-01-08 08:50:33,420 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-08 03:51:05] 2026-01-08 08:50:33,566 | INFO     | sufficient remaining disk space (94429511680 B)
[2026-01-08 03:51:05] 2026-01-08 08:50:33,566 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 03:51:05] 2026-01-08 08:50:33,567 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 03:51:05] 2026-01-08 08:50:33,567 | INFO     | update_server=False
[2026-01-08 03:51:05] 2026-01-08 08:50:33,567 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 03:51:05] 2026-01-08 08:50:33,574 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 03:51:05] 2026-01-08 08:50:33,790 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 03:51:05] 2026-01-08 08:50:33,790 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 03:51:05] 2026-01-08 08:50:33,790 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 03:51:05] 2026-01-08 08:50:33,790 | INFO     | will abort loop
[2026-01-08 03:51:05] 2026-01-08 08:50:33,803 | INFO     | all data control threads have been joined
[2026-01-08 03:51:05] 2026-01-08 08:50:34,145 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 03:51:05] 2026-01-08 08:50:34,324 | INFO     | all payload control threads have been joined
[2026-01-08 03:51:05] 2026-01-08 08:50:34,573 | INFO     | [job] retrieve thread has finished
[2026-01-08 03:51:05] 2026-01-08 08:50:34,752 | INFO     | [job] validate thread has finished
[2026-01-08 03:51:05] 2026-01-08 08:50:34,797 | INFO     | [job] job monitor thread has finished
[2026-01-08 03:51:05] 2026-01-08 08:50:34,809 | INFO     | [data] control thread has finished
[2026-01-08 03:51:05] 2026-01-08 08:50:34,851 | INFO     | [data] copytool_in thread has finished
[2026-01-08 03:51:05] 2026-01-08 08:50:34,855 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 03:51:05] 2026-01-08 08:50:34,856 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 03:51:05] 2026-01-08 08:50:34,899 | INFO     | [payload] failed_post thread has finished
[2026-01-08 03:51:05] 2026-01-08 08:50:34,992 | INFO     | all job control threads have been joined
[2026-01-08 03:51:05] 2026-01-08 08:50:35,151 | INFO     | [job] queue monitor thread has finished
[2026-01-08 03:51:05] 2026-01-08 08:50:35,236 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 03:51:05] 2026-01-08 08:50:35,330 | INFO     | [payload] control thread has finished
[2026-01-08 03:51:05] 2026-01-08 08:50:35,581 | INFO     | [data] copytool_out thread has finished
[2026-01-08 03:51:05] 2026-01-08 08:50:35,606 | INFO     | [payload] validate_post thread has finished
[2026-01-08 03:51:05] 2026-01-08 08:50:35,998 | INFO     | [job] control thread has finished
[2026-01-08 03:51:05] 2026-01-08 08:50:36,018 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 03:51:05] 2026-01-08 08:50:36,703 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 03:51:05] 2026-01-08 08:50:40,712 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 03:51:05] 2026-01-08 08:50:44,775 | INFO     | [monitor] cgroup control has ended
[2026-01-08 03:51:05] 2026-01-08 08:50:45,793 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140301933283136)>', '<ExcThread(monitor, started 140300911621888)>']
[2026-01-08 03:51:05] 2026-01-08 08:50:50,819 | INFO     | all workflow threads have been joined
[2026-01-08 03:51:05] 2026-01-08 08:50:50,819 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 03:51:05] 2026-01-08 08:50:50,819 | INFO     | traces error code: 0
[2026-01-08 03:51:05] 2026-01-08 08:50:50,819 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 03:51:05] 2026-01-08 08:51:00,259 | INFO     | 13577s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-08 03:51:05] 2026-01-08 08:51:03,316 | INFO     | PID=1148210 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 03:51:05] 2026-01-08 08:51:03,317 | INFO     | .. there are 16 such processes running
[2026-01-08 03:51:05] 2026-01-08 08:51:03,317 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 03:51:05] 2026-01-08 08:51:03,317 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 03:51:05] 2026-01-08 08:51:03,317 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 03:51:05] 2026-01-08 08:51:03,317 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 03:51:05] 2026-01-08 08:51:03,317 | INFO     | [monitor] control thread has ended
[2026-01-08 03:51:05] 2026-01-08 08:51:04,513 [wrapper] ==== pilot stdout END ====
[2026-01-08 03:51:05] 2026-01-08 08:51:04,525 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 03:51:05] 2026-01-08 08:51:04,574 [wrapper] pilotpid: 1148210
[2026-01-08 03:51:05] 2026-01-08 08:51:04,585 [wrapper] Pilot exit status: 0
[2026-01-08 03:51:05] 2026-01-08 08:51:04,659 [wrapper] pandaids: 6962315505
[2026-01-08 03:51:05] 2026-01-08 08:51:04,960 [wrapper] cleanup supervisor_pilot 1725239 1148211
[2026-01-08 03:51:05] 2026-01-08 08:51:04,974 [wrapper] Test setup, not cleaning
[2026-01-08 03:51:05] 2026-01-08 08:51:05,001 [wrapper] apfmon messages muted
[2026-01-08 03:51:05] 2026-01-08 08:51:05,024 [wrapper] ==== wrapper stdout END ====
[2026-01-08 03:51:05] 2026-01-08 08:51:05,047 [wrapper] ==== wrapper stderr END ====
[2026-01-08 03:51:05]  *** Error codes and diagnostics ***
[2026-01-08 03:51:05]     "exeErrorCode": 0,
[2026-01-08 03:51:05]     "exeErrorDiag": "",
[2026-01-08 03:51:05]     "pilotErrorCode": 0,
[2026-01-08 03:51:05]     "pilotErrorDiag": "",
[2026-01-08 03:51:05]  *** Listing of results directory ***
[2026-01-08 03:51:05] total 438856
[2026-01-08 03:51:05] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 15:55 pilot3.tar.gz
[2026-01-08 03:51:05] -rwx------. 1 boincer umatlas     36322 Jan  7 15:56 runpilot2-wrapper.sh
[2026-01-08 03:51:05] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 15:56 queuedata.json
[2026-01-08 03:51:05] -rw-r--r--. 1 boincer umatlas       100 Jan  8 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 03:51:05] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 00:03 run_atlas
[2026-01-08 03:51:05] -rw-r--r--. 1 boincer umatlas       105 Jan  8 00:03 job.xml
[2026-01-08 03:51:05] -rw-r--r--. 2 boincer umatlas 225914758 Jan  8 00:03 EVNT.47898824._000468.pool.root.1
[2026-01-08 03:51:05] -rw-r--r--. 2 boincer umatlas    592400 Jan  8 00:03 input.tar.gz
[2026-01-08 03:51:05] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 00:03 start_atlas.sh
[2026-01-08 03:51:05] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 00:03 shared
[2026-01-08 03:51:05] -rw-r--r--. 1 boincer umatlas         0 Jan  8 00:03 boinc_lockfile
[2026-01-08 03:51:05] -rw-r--r--. 1 boincer umatlas      2518 Jan  8 00:03 pandaJob.out
[2026-01-08 03:51:05] -rw-------. 1 boincer umatlas        57 Jan  8 00:03 setup.sh.local
[2026-01-08 03:51:05] -rw-------. 1 boincer umatlas    989835 Jan  8 00:04 agis_schedconf.cvmfs.json
[2026-01-08 03:51:05] drwx------. 5 boincer umatlas      4096 Jan  8 00:04 pilot3
[2026-01-08 03:51:05] -rw-------. 1 boincer umatlas 215156352 Jan  8 03:48 HITS.47898826._012010.pool.root.1
[2026-01-08 03:51:05] -rw-r--r--. 1 boincer umatlas       531 Jan  8 03:48 boinc_task_state.xml
[2026-01-08 03:51:05] -rw-r--r--. 1 boincer umatlas      6878 Jan  8 03:49 init_data.xml
[2026-01-08 03:51:05] -rw-------. 1 boincer umatlas      1042 Jan  8 03:49 memory_monitor_summary.json
[2026-01-08 03:51:05] -rw-------. 1 boincer umatlas   1516240 Jan  8 03:49 agis_ddmendpoints.agis.ALL.json
[2026-01-08 03:51:05] -rw-------. 1 boincer umatlas    507798 Jan  8 03:49 log.47898826._012010.job.log.tgz.1
[2026-01-08 03:51:05] -rw-------. 1 boincer umatlas        95 Jan  8 03:50 pilot_heartbeat.json
[2026-01-08 03:51:05] -rw-------. 1 boincer umatlas      7830 Jan  8 03:50 heartbeat.json
[2026-01-08 03:51:05] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 03:50 boinc_mmap_file
[2026-01-08 03:51:05] -rw-r--r--. 1 boincer umatlas        28 Jan  8 03:50 wrapper_checkpoint.txt
[2026-01-08 03:51:05] -rw-------. 1 boincer umatlas       939 Jan  8 03:51 pilotlog.txt
[2026-01-08 03:51:05] -rw-------. 1 boincer umatlas   1695220 Jan  8 03:51 log.47898826._012010.job.log.1
[2026-01-08 03:51:05] -rw-------. 1 boincer umatlas       357 Jan  8 03:51 output.list
[2026-01-08 03:51:05] -rw-r--r--. 1 boincer umatlas       620 Jan  8 03:51 runtime_log
[2026-01-08 03:51:05] -rw-------. 1 boincer umatlas   2222080 Jan  8 03:51 result.tar.gz
[2026-01-08 03:51:05] -rw-r--r--. 1 boincer umatlas      9355 Jan  8 03:51 runtime_log.err
[2026-01-08 03:51:05] -rw-------. 1 boincer umatlas       658 Jan  8 03:51 70fLDmkkpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5ZdKDmtfHZyn.diag
[2026-01-08 03:51:05] -rw-r--r--. 1 boincer umatlas     21272 Jan  8 03:51 stderr.txt
[2026-01-08 03:51:05] HITS file was successfully produced:
[2026-01-08 03:51:05] -rw-------. 1 boincer umatlas 215156352 Jan  8 03:48 shared/HITS.pool.root.1
[2026-01-08 03:51:05]  *** Contents of shared directory: ***
[2026-01-08 03:51:05] total 433512
[2026-01-08 03:51:05] -rw-r--r--. 2 boincer umatlas 225914758 Jan  8 00:03 ATLAS.root_0
[2026-01-08 03:51:05] -rw-r--r--. 2 boincer umatlas    592400 Jan  8 00:03 input.tar.gz
[2026-01-08 03:51:05] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 00:03 start_atlas.sh
[2026-01-08 03:51:05] -rw-------. 1 boincer umatlas 215156352 Jan  8 03:48 HITS.pool.root.1
[2026-01-08 03:51:05] -rw-------. 1 boincer umatlas   2222080 Jan  8 03:51 result.tar.gz
03:51:28 (1143826): run_atlas exited; CPU time 62318.021639
03:51:28 (1143826): called boinc_finish(0)

</stderr_txt>
]]>

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