Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:38:15 (17159): wrapper (7.7.26015): starting
12:38:15 (17159): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 12:38:15] Arguments: --nthreads 8
[2026-01-08 12:38:15] Threads: 8
[2026-01-08 12:38:15] Checking for CVMFS
[2026-01-08 12:38:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 12:38:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 12:38:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 12:38:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 12:38:18] 2.11.2.0 27636 33907 97476 154905 3 60 22919415 25165825 96 130560 0 14248682 99.788 9806718 3394 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 12:38:18] CVMFS is ok
[2026-01-08 12:38:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 12:38:18] Checking for apptainer binary...
[2026-01-08 12:38:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 12:38:18] Running /usr/bin/apptainer --version
[2026-01-08 12:38:18] apptainer version 1.3.2-1.el7
[2026-01-08 12:38:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 12:38:51] cg-vwn429.simple-grid.lan
[2026-01-08 12:38:51] apptainer works
[2026-01-08 12:38:51] Set ATHENA_PROC_NUMBER=8
[2026-01-08 12:38:51] Set ATHENA_CORE_NUMBER=8
[2026-01-08 12:38:51] Starting ATLAS job with PandaID=6962324226
[2026-01-08 12:38:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 18:59:54]  *** The last 200 lines of the pilot log: ***
[2026-01-08 18:59:54] 2026-01-08 17:59:02,533 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6962324226/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 18:59:54] 2026-01-08 17:59:02,534 | INFO     | extracted standard info from prmon json
[2026-01-08 18:59:54] 2026-01-08 17:59:02,534 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 18:59:54] 2026-01-08 17:59:02,535 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 18:59:54] 2026-01-08 17:59:02,535 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 18:59:54] 2026-01-08 17:59:02,535 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 18:59:54] 2026-01-08 17:59:02,543 | INFO     | fitting pss+swap vs Time
[2026-01-08 18:59:54] 2026-01-08 17:59:02,544 | INFO     | sum of square deviations: 14346910860.0
[2026-01-08 18:59:54] 2026-01-08 17:59:02,567 | INFO     | sum of deviations: 132935484396.0
[2026-01-08 18:59:54] 2026-01-08 17:59:02,567 | INFO     | mean x: 1767884054.0
[2026-01-08 18:59:54] 2026-01-08 17:59:02,568 | INFO     | mean y: 2470974.2395543177
[2026-01-08 18:59:54] 2026-01-08 17:59:02,568 | INFO     | intersect: -16378374029.104548
[2026-01-08 18:59:54] 2026-01-08 17:59:02,568 | INFO     | chi2: 8.255872459512807
[2026-01-08 18:59:54] 2026-01-08 17:59:02,569 | INFO     | sum of square deviations: 13755764892.5
[2026-01-08 18:59:54] 2026-01-08 17:59:02,573 | INFO     | sum of deviations: 155103950767.5
[2026-01-08 18:59:54] 2026-01-08 17:59:02,574 | INFO     | mean x: 1767883901.5
[2026-01-08 18:59:54] 2026-01-08 17:59:02,574 | INFO     | mean y: 2476623.596045198
[2026-01-08 18:59:54] 2026-01-08 17:59:02,574 | INFO     | intersect: -19931404172.11426
[2026-01-08 18:59:54] 2026-01-08 17:59:02,575 | INFO     | chi2: 7.536604905753063
[2026-01-08 18:59:54] 2026-01-08 17:59:02,575 | INFO     | current chi2=7.536604905753063 (change=8.712193136304682 %)
[2026-01-08 18:59:54] 2026-01-08 17:59:02,575 | INFO     | right removable region: 353
[2026-01-08 18:59:54] 2026-01-08 17:59:02,576 | INFO     | sum of square deviations: 13755764892.5
[2026-01-08 18:59:54] 2026-01-08 17:59:02,587 | INFO     | sum of deviations: 5290314791.999996
[2026-01-08 18:59:54] 2026-01-08 17:59:02,587 | INFO     | mean x: 1767884206.5
[2026-01-08 18:59:54] 2026-01-08 17:59:02,587 | INFO     | mean y: 2503889.926553672
[2026-01-08 18:59:54] 2026-01-08 17:59:02,588 | INFO     | intersect: -677404791.3630953
[2026-01-08 18:59:54] 2026-01-08 17:59:02,588 | INFO     | chi2: 3.3411426842680396
[2026-01-08 18:59:54] 2026-01-08 17:59:02,588 | INFO     | current chi2=3.3411426842680396 (change=59.53010780322536 %)
[2026-01-08 18:59:54] 2026-01-08 17:59:02,589 | INFO     | sum of square deviations: 13181084350.0
[2026-01-08 18:59:54] 2026-01-08 17:59:02,593 | INFO     | sum of deviations: -80660461039.99998
[2026-01-08 18:59:54] 2026-01-08 17:59:02,593 | INFO     | mean x: 1767884359.0
[2026-01-08 18:59:54] 2026-01-08 17:59:02,593 | INFO     | mean y: 2526654.8481375356
[2026-01-08 18:59:54] 2026-01-08 17:59:02,593 | INFO     | intersect: 10820936102.500662
[2026-01-08 18:59:54] 2026-01-08 17:59:02,594 | INFO     | chi2: 1.0826172554094369
[2026-01-08 18:59:54] 2026-01-08 17:59:02,594 | INFO     | current chi2=1.0826172554094369 (change=67.59739533103443 %)
[2026-01-08 18:59:54] 2026-01-08 17:59:02,595 | INFO     | sum of square deviations: 12622636670.0
[2026-01-08 18:59:54] 2026-01-08 17:59:02,608 | INFO     | sum of deviations: -92985324380.0
[2026-01-08 18:59:54] 2026-01-08 17:59:02,608 | INFO     | mean x: 1767884511.5
[2026-01-08 18:59:54] 2026-01-08 17:59:02,608 | INFO     | mean y: 2530003.697674419
[2026-01-08 18:59:54] 2026-01-08 17:59:02,608 | INFO     | intersect: 13025745284.772964
[2026-01-08 18:59:54] 2026-01-08 17:59:02,609 | INFO     | chi2: 0.9979842863419173
[2026-01-08 18:59:54] 2026-01-08 17:59:02,609 | INFO     | current chi2=0.9979842863419173 (change=7.817441357473294 %)
[2026-01-08 18:59:54] 2026-01-08 17:59:02,609 | INFO     | left removable region: 30
[2026-01-08 18:59:54] 2026-01-08 17:59:02,610 | INFO     | sum of square deviations: 10449170802.0
[2026-01-08 18:59:54] 2026-01-08 17:59:02,613 | INFO     | sum of deviations: -41774858018.00001
[2026-01-08 18:59:54] 2026-01-08 17:59:02,614 | INFO     | mean x: 1767884786.0
[2026-01-08 18:59:54] 2026-01-08 17:59:02,614 | INFO     | mean y: 2528777.9938080497
[2026-01-08 18:59:54] 2026-01-08 17:59:02,614 | INFO     | intersect: 7070375339.866128
[2026-01-08 18:59:54] 2026-01-08 17:59:02,614 | INFO     | chi2: 0.16403388729258697
[2026-01-08 18:59:54] 2026-01-08 17:59:02,615 | INFO     | current memory leak: -4.00 B/s (using 323 data points, chi2=0.16)
[2026-01-08 18:59:54] 2026-01-08 17:59:02,615 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-08 18:59:54] 2026-01-08 17:59:02,616 | INFO     | ..............................
[2026-01-08 18:59:54] 2026-01-08 17:59:02,616 | INFO     | . Timing measurements:
[2026-01-08 18:59:54] 2026-01-08 17:59:02,616 | INFO     | . get job = 0 s
[2026-01-08 18:59:54] 2026-01-08 17:59:02,616 | INFO     | . initial setup = 11 s
[2026-01-08 18:59:54] 2026-01-08 17:59:02,616 | INFO     | . payload setup = 158 s
[2026-01-08 18:59:54] 2026-01-08 17:59:02,616 | INFO     | . stage-in = 0 s
[2026-01-08 18:59:54] 2026-01-08 17:59:02,616 | INFO     | . payload execution = 22057 s
[2026-01-08 18:59:54] 2026-01-08 17:59:02,616 | INFO     | . stage-out = 3 s
[2026-01-08 18:59:54] 2026-01-08 17:59:02,616 | INFO     | . log creation = 1 s
[2026-01-08 18:59:54] 2026-01-08 17:59:02,617 | INFO     | ..............................
[2026-01-08 18:59:54] 2026-01-08 17:59:02,634 | INFO     | time since job start (22558s) is within the limit (174528.0s)
[2026-01-08 18:59:54] 2026-01-08 17:59:02,977 | INFO     | 
[2026-01-08 18:59:54] 2026-01-08 17:59:02,977 | INFO     | job summary report
[2026-01-08 18:59:54] 2026-01-08 17:59:02,977 | INFO     | --------------------------------------------------
[2026-01-08 18:59:54] 2026-01-08 17:59:02,978 | INFO     | PanDA job id: 6962324226
[2026-01-08 18:59:54] 2026-01-08 17:59:02,978 | INFO     | task id: 47898826
[2026-01-08 18:59:54] 2026-01-08 17:59:02,978 | INFO     | errors: (none)
[2026-01-08 18:59:54] 2026-01-08 17:59:02,978 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 18:59:54] 2026-01-08 17:59:02,978 | INFO     | pilot state: finished 
[2026-01-08 18:59:54] 2026-01-08 17:59:02,978 | INFO     | transexitcode: 0
[2026-01-08 18:59:54] 2026-01-08 17:59:02,978 | INFO     | exeerrorcode: 0
[2026-01-08 18:59:54] 2026-01-08 17:59:02,978 | INFO     | exeerrordiag: 
[2026-01-08 18:59:54] 2026-01-08 17:59:02,978 | INFO     | exitcode: 0
[2026-01-08 18:59:54] 2026-01-08 17:59:02,978 | INFO     | exitmsg: OK
[2026-01-08 18:59:54] 2026-01-08 17:59:02,979 | INFO     | cpuconsumptiontime: 82979 s
[2026-01-08 18:59:54] 2026-01-08 17:59:02,979 | INFO     | nevents: 400
[2026-01-08 18:59:54] 2026-01-08 17:59:02,979 | INFO     | neventsw: 0
[2026-01-08 18:59:54] 2026-01-08 17:59:02,979 | INFO     | pid: 27548
[2026-01-08 18:59:54] 2026-01-08 17:59:02,979 | INFO     | pgrp: 27548
[2026-01-08 18:59:54] 2026-01-08 17:59:02,979 | INFO     | corecount: 8
[2026-01-08 18:59:54] 2026-01-08 17:59:02,979 | INFO     | event service: False
[2026-01-08 18:59:54] 2026-01-08 17:59:02,979 | INFO     | sizes: {0: 2283743, 1: 2283998, 12: 2283998, 23: 2284026, 34: 2284054, 44: 2284082, 55: 2284238, 66: 2284266, 77: 2284294, 88: 2284350, 98: 2284378, 109: 2285004, 
[2026-01-08 18:59:54] 2026-01-08 17:59:02,979 | INFO     | --------------------------------------------------
[2026-01-08 18:59:54] 2026-01-08 17:59:02,979 | INFO     | 
[2026-01-08 18:59:54] 2026-01-08 17:59:02,980 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-08 18:59:54] 2026-01-08 17:59:03,644 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 18:59:54] 2026-01-08 17:59:03,644 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 18:59:54] 2026-01-08 17:59:03,645 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 18:59:54] 2026-01-08 17:59:03,645 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 18:59:54] 2026-01-08 17:59:03,645 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 18:59:54] 2026-01-08 17:59:03,645 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 18:59:54] 2026-01-08 17:59:03,645 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 18:59:54] 2026-01-08 17:59:03,645 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 18:59:54] 2026-01-08 17:59:03,645 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 18:59:54] 2026-01-08 17:59:03,645 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 18:59:54] 2026-01-08 17:59:03,645 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 18:59:54] 2026-01-08 17:59:03,646 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 18:59:54] 2026-01-08 17:59:03,646 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 18:59:54] 2026-01-08 17:59:03,646 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 18:59:54] 2026-01-08 17:59:03,646 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 18:59:54] 2026-01-08 17:59:03,646 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 18:59:54] 2026-01-08 17:59:03,646 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 18:59:54] 2026-01-08 17:59:03,646 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 18:59:54] 2026-01-08 17:59:03,646 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 18:59:54] 2026-01-08 17:59:03,647 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 18:59:54] 2026-01-08 17:59:03,647 | INFO     | job 6962324226 has completed (purged errors)
[2026-01-08 18:59:54] 2026-01-08 17:59:03,647 | INFO     | overall cleanup function is called
[2026-01-08 18:59:54] 2026-01-08 17:59:04,656 | INFO     | --- collectZombieJob: --- 10, [27548]
[2026-01-08 18:59:54] 2026-01-08 17:59:04,656 | INFO     | zombie collector waiting for pid 27548
[2026-01-08 18:59:54] 2026-01-08 17:59:04,656 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 18:59:54] 2026-01-08 17:59:04,657 | INFO     | collected zombie processes
[2026-01-08 18:59:54] 2026-01-08 17:59:04,657 | INFO     | will attempt to kill all subprocesses of pid=27548
[2026-01-08 18:59:54] 2026-01-08 17:59:04,776 | INFO     | process IDs to be killed: [27548] (in reverse order)
[2026-01-08 18:59:54] 2026-01-08 17:59:05,829 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 18:59:54] 2026-01-08 17:59:05,829 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 18:59:54] 2026-01-08 17:59:05,831 | INFO     | did not find any defunct processes belonging to 27548
[2026-01-08 18:59:54] 2026-01-08 17:59:05,833 | INFO     | did not find any defunct processes belonging to 27548
[2026-01-08 18:59:54] 2026-01-08 17:59:05,833 | INFO     | ready for new job
[2026-01-08 18:59:54] 2026-01-08 17:59:05,833 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 18:59:54] 2026-01-08 17:59:05,836 | INFO     | ***************************************
[2026-01-08 18:59:54] 2026-01-08 17:59:05,836 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 18:59:54] 2026-01-08 17:59:05,836 | INFO     | ***************************************
[2026-01-08 18:59:54] 2026-01-08 17:59:05,836 | INFO     | 
[2026-01-08 18:59:54] 2026-01-08 17:59:05,837 | INFO     | pilot is running in a VM
[2026-01-08 18:59:54] 2026-01-08 17:59:05,837 | INFO     | architecture information:
[2026-01-08 18:59:54] 2026-01-08 17:59:05,860 | INFO     | executing command: cat /etc/os-release
[2026-01-08 18:59:54] 2026-01-08 17:59:06,120 | INFO     | cat /etc/os-release:
[2026-01-08 18:59:54] NAME="CentOS Linux"
[2026-01-08 18:59:54] VERSION="7 (Core)"
[2026-01-08 18:59:54] ID="centos"
[2026-01-08 18:59:54] ID_LIKE="rhel fedora"
[2026-01-08 18:59:54] VERSION_ID="7"
[2026-01-08 18:59:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 18:59:54] ANSI_COLOR="0;31"
[2026-01-08 18:59:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 18:59:54] HOME_URL="https://www.centos.org/"
[2026-01-08 18:59:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 18:59:54] 
[2026-01-08 18:59:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 18:59:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 18:59:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 18:59:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 18:59:54] 
[2026-01-08 18:59:54] 2026-01-08 17:59:06,121 | INFO     | ***************************************
[2026-01-08 18:59:54] 2026-01-08 17:59:06,624 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-08 18:59:54] 2026-01-08 17:59:06,871 | INFO     | sufficient remaining disk space (496081305600 B)
[2026-01-08 18:59:54] 2026-01-08 17:59:06,871 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 18:59:54] 2026-01-08 17:59:06,871 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 18:59:54] 2026-01-08 17:59:06,871 | INFO     | update_server=False
[2026-01-08 18:59:54] 2026-01-08 17:59:06,871 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 18:59:54] 2026-01-08 17:59:07,119 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 18:59:54] 2026-01-08 17:59:07,176 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 18:59:54] 2026-01-08 17:59:07,176 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 18:59:54] 2026-01-08 17:59:07,176 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 18:59:54] 2026-01-08 17:59:07,177 | INFO     | will abort loop
[2026-01-08 18:59:54] 2026-01-08 17:59:07,422 | INFO     | all job control threads have been joined
[2026-01-08 18:59:54] 2026-01-08 17:59:07,618 | INFO     | all data control threads have been joined
[2026-01-08 18:59:54] 2026-01-08 17:59:07,782 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 18:59:54] 2026-01-08 17:59:07,877 | INFO     | [job] retrieve thread has finished
[2026-01-08 18:59:54] 2026-01-08 17:59:07,885 | INFO     | [payload] failed_post thread has finished
[2026-01-08 18:59:54] 2026-01-08 17:59:07,977 | INFO     | [job] validate thread has finished
[2026-01-08 18:59:54] 2026-01-08 17:59:08,182 | INFO     | [job] job monitor thread has finished
[2026-01-08 18:59:54] 2026-01-08 17:59:08,193 | INFO     | all payload control threads have been joined
[2026-01-08 18:59:54] 2026-01-08 17:59:08,428 | INFO     | [job] control thread has finished
[2026-01-08 18:59:54] 2026-01-08 17:59:08,624 | INFO     | [data] control thread has finished
[2026-01-08 18:59:54] 2026-01-08 17:59:08,731 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 18:59:54] 2026-01-08 17:59:08,749 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 18:59:54] 2026-01-08 17:59:08,754 | INFO     | [data] copytool_in thread has finished
[2026-01-08 18:59:54] 2026-01-08 17:59:08,765 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 18:59:54] 2026-01-08 17:59:08,788 | INFO     | [job] queue monitor thread has finished
[2026-01-08 18:59:54] 2026-01-08 17:59:08,949 | INFO     | [payload] validate_post thread has finished
[2026-01-08 18:59:54] 2026-01-08 17:59:09,126 | INFO     | [data] copytool_out thread has finished
[2026-01-08 18:59:54] 2026-01-08 17:59:09,199 | INFO     | [payload] control thread has finished
[2026-01-08 18:59:54] 2026-01-08 17:59:09,260 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 18:59:54] 2026-01-08 17:59:10,239 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 18:59:54] 2026-01-08 17:59:14,248 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 18:59:54] 2026-01-08 17:59:35,775 | INFO     | PID=20890 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 18:59:54] 2026-01-08 17:59:35,775 | INFO     | .. there are 2 such processes running
[2026-01-08 18:59:54] 2026-01-08 17:59:35,776 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 18:59:54] 2026-01-08 17:59:35,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 18:59:54] 2026-01-08 17:59:35,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 18:59:54] 2026-01-08 17:59:42,718 | INFO     | [monitor] cgroup control has ended
[2026-01-08 18:59:54] 2026-01-08 17:59:43,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139626573203264)>', '<ExcThread(monitor, started 139625746126592)>']
[2026-01-08 18:59:54] 2026-01-08 17:59:43,824 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 18:59:54] 2026-01-08 17:59:43,824 | INFO     | [monitor] control thread has ended
[2026-01-08 18:59:54] 2026-01-08 17:59:48,830 | INFO     | all workflow threads have been joined
[2026-01-08 18:59:54] 2026-01-08 17:59:48,830 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 18:59:54] 2026-01-08 17:59:48,831 | INFO     | traces error code: 0
[2026-01-08 18:59:54] 2026-01-08 17:59:48,831 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 18:59:54] 2026-01-08 17:59:49,362 [wrapper] ==== pilot stdout END ====
[2026-01-08 18:59:54] 2026-01-08 17:59:49,450 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 18:59:54] 2026-01-08 17:59:49,552 [wrapper] pilotpid: 20890
[2026-01-08 18:59:54] 2026-01-08 17:59:49,644 [wrapper] Pilot exit status: 0
[2026-01-08 18:59:54] 2026-01-08 17:59:50,091 [wrapper] pandaids: 6962324226
[2026-01-08 18:59:54] 2026-01-08 17:59:50,985 [wrapper] cleanup supervisor_pilot 30329 20891
[2026-01-08 18:59:54] 2026-01-08 17:59:51,065 [wrapper] Test setup, not cleaning
[2026-01-08 18:59:54] 2026-01-08 17:59:51,174 [wrapper] apfmon messages muted
[2026-01-08 18:59:54] 2026-01-08 17:59:51,234 [wrapper] ==== wrapper stdout END ====
[2026-01-08 18:59:54] 2026-01-08 17:59:51,302 [wrapper] ==== wrapper stderr END ====
[2026-01-08 18:59:54]  *** Error codes and diagnostics ***
[2026-01-08 18:59:54]     "exeErrorCode": 0,
[2026-01-08 18:59:54]     "exeErrorDiag": "",
[2026-01-08 18:59:54]     "pilotErrorCode": 0,
[2026-01-08 18:59:54]     "pilotErrorDiag": "",
[2026-01-08 18:59:54]  *** Listing of results directory ***
[2026-01-08 18:59:54] total 454336
[2026-01-08 18:59:54] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 18:59:54] -rwx------. 1 boinc boinc     36322 Jan  7 22:10 runpilot2-wrapper.sh
[2026-01-08 18:59:54] -rw-r--r--. 1 boinc boinc      5112 Jan  7 22:16 queuedata.json
[2026-01-08 18:59:54] -rw-r--r--. 1 boinc boinc       100 Jan  8 12:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 18:59:54] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 12:38 run_atlas
[2026-01-08 18:59:54] -rw-r--r--. 1 boinc boinc       105 Jan  8 12:38 job.xml
[2026-01-08 18:59:54] -rw-r--r--. 2 boinc boinc 225127738 Jan  8 12:38 EVNT.47898824._000773.pool.root.1
[2026-01-08 18:59:54] -rw-r--r--. 1 boinc boinc      6392 Jan  8 12:38 init_data.xml
[2026-01-08 18:59:54] -rw-r--r--. 2 boinc boinc     15847 Jan  8 12:38 start_atlas.sh
[2026-01-08 18:59:54] drwxrwx--x. 2 boinc boinc        68 Jan  8 12:38 shared
[2026-01-08 18:59:54] -rw-r--r--. 2 boinc boinc    592404 Jan  8 12:38 input.tar.gz
[2026-01-08 18:59:54] -rw-r--r--. 1 boinc boinc         0 Jan  8 12:38 boinc_lockfile
[2026-01-08 18:59:54] -rw-r--r--. 1 boinc boinc      2519 Jan  8 12:38 pandaJob.out
[2026-01-08 18:59:54] -rw-------. 1 boinc boinc    989835 Jan  8 12:42 agis_schedconf.cvmfs.json
[2026-01-08 18:59:54] drwx------. 5 boinc boinc      4096 Jan  8 12:43 pilot3
[2026-01-08 18:59:54] -rw-------. 1 boinc boinc 229082484 Jan  8 18:55 HITS.47898826._016738.pool.root.1
[2026-01-08 18:59:54] -rw-r--r--. 1 boinc boinc       531 Jan  8 18:56 boinc_task_state.xml
[2026-01-08 18:59:54] -rw-------. 1 boinc boinc      1016 Jan  8 18:57 memory_monitor_summary.json
[2026-01-08 18:59:54] -rw-------. 1 boinc boinc   1516240 Jan  8 18:57 agis_ddmendpoints.agis.ALL.json
[2026-01-08 18:59:54] -rw-------. 1 boinc boinc    574368 Jan  8 18:57 log.47898826._016738.job.log.tgz.1
[2026-01-08 18:59:54] -rw-------. 1 boinc boinc        95 Jan  8 18:58 pilot_heartbeat.json
[2026-01-08 18:59:54] -rw-------. 1 boinc boinc      7783 Jan  8 18:59 heartbeat.json
[2026-01-08 18:59:54] -rw-r--r--. 1 boinc boinc      8192 Jan  8 18:59 boinc_mmap_file
[2026-01-08 18:59:54] -rw-r--r--. 1 boinc boinc        28 Jan  8 18:59 wrapper_checkpoint.txt
[2026-01-08 18:59:54] -rw-------. 1 boinc boinc      5071 Jan  8 18:59 pilotlog.txt
[2026-01-08 18:59:54] -rw-------. 1 boinc boinc   2991718 Jan  8 18:59 log.47898826._016738.job.log.1
[2026-01-08 18:59:54] -rw-------. 1 boinc boinc       357 Jan  8 18:59 output.list
[2026-01-08 18:59:54] -rw-r--r--. 1 boinc boinc       620 Jan  8 18:59 runtime_log
[2026-01-08 18:59:54] -rw-------. 1 boinc boinc   3584000 Jan  8 18:59 result.tar.gz
[2026-01-08 18:59:54] -rw-------. 1 boinc boinc       657 Jan  8 18:59 UMyNDmBypx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm39dKDm2avt3m.diag
[2026-01-08 18:59:54] -rw-r--r--. 1 boinc boinc      8833 Jan  8 18:59 runtime_log.err
[2026-01-08 18:59:54] -rw-r--r--. 1 boinc boinc     20789 Jan  8 18:59 stderr.txt
[2026-01-08 18:59:54] HITS file was successfully produced:
[2026-01-08 18:59:54] -rw-------. 1 boinc boinc 229082484 Jan  8 18:55 shared/HITS.pool.root.1
[2026-01-08 18:59:54]  *** Contents of shared directory: ***
[2026-01-08 18:59:54] total 447664
[2026-01-08 18:59:54] -rw-r--r--. 2 boinc boinc 225127738 Jan  8 12:38 ATLAS.root_0
[2026-01-08 18:59:54] -rw-r--r--. 2 boinc boinc     15847 Jan  8 12:38 start_atlas.sh
[2026-01-08 18:59:54] -rw-r--r--. 2 boinc boinc    592404 Jan  8 12:38 input.tar.gz
[2026-01-08 18:59:54] -rw-------. 1 boinc boinc 229082484 Jan  8 18:55 HITS.pool.root.1
[2026-01-08 18:59:54] -rw-------. 1 boinc boinc   3584000 Jan  8 18:59 result.tar.gz
18:59:55 (17159): run_atlas exited; CPU time 83218.987294
18:59:55 (17159): called boinc_finish(0)

</stderr_txt>
]]>

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