Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:46:03 (28528): wrapper (7.7.26015): starting
22:46:03 (28528): wrapper: running run_atlas (--nthreads 12)
[2026-01-07 22:46:03] Arguments: --nthreads 12
[2026-01-07 22:46:03] Threads: 12
[2026-01-07 22:46:03] Checking for CVMFS
[2026-01-07 22:46:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 22:46:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 22:46:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 22:46:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 22:46:03] 2.11.2.0 3035 349033 94292 154889 3 59 15015487 20275201 1 130560 3 147101701 99.955 20873593 16249 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-07 22:46:03] CVMFS is ok
[2026-01-07 22:46:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 22:46:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 22:46:03] Further information can be found at the LHC@home message board.
[2026-01-07 22:46:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 22:46:03] Checking for apptainer binary...
[2026-01-07 22:46:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 22:46:03] Running /usr/bin/apptainer --version
[2026-01-07 22:46:03] apptainer version 1.3.2-1.el7
[2026-01-07 22:46:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 22:46:05] c-205-31.aglt2.org
[2026-01-07 22:46:05] apptainer works
[2026-01-07 22:46:05] Set ATHENA_PROC_NUMBER=12
[2026-01-07 22:46:05] Set ATHENA_CORE_NUMBER=12
[2026-01-07 22:46:05] Starting ATLAS job with PandaID=6962317374
[2026-01-07 22:46:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 00:28:35]  *** The last 200 lines of the pilot log: ***
[2026-01-08 00:28:35] 2026-01-08 05:27:47,056 | INFO     | time since job start (6087s) is within the limit (174528.0s)
[2026-01-08 00:28:35] 2026-01-08 05:27:48,178 | INFO     | PID=32214 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 00:28:35] 2026-01-08 05:27:48,237 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 00:28:35] 2026-01-08 05:27:48,241 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1839.9166666666667
[2026-01-08 00:28:35] 2026-01-08 05:27:48,244 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962317374/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 00:28:35] 2026-01-08 05:27:48,245 | INFO     | extracted standard info from prmon json
[2026-01-08 00:28:35] 2026-01-08 05:27:48,245 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 00:28:35] 2026-01-08 05:27:48,245 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 00:28:35] 2026-01-08 05:27:48,245 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 00:28:35] 2026-01-08 05:27:48,245 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 00:28:35] 2026-01-08 05:27:48,247 | INFO     | fitting pss+swap vs Time
[2026-01-08 00:28:35] 2026-01-08 05:27:48,247 | INFO     | sum of square deviations: 310052325.0
[2026-01-08 00:28:35] 2026-01-08 05:27:48,248 | INFO     | sum of deviations: 178415209.5
[2026-01-08 00:28:35] 2026-01-08 05:27:48,248 | INFO     | mean x: 1767847028.5
[2026-01-08 00:28:35] 2026-01-08 05:27:48,248 | INFO     | mean y: 2657147.95
[2026-01-08 00:28:35] 2026-01-08 05:27:48,248 | INFO     | intersect: -1014625331.5598053
[2026-01-08 00:28:35] 2026-01-08 05:27:48,248 | INFO     | chi2: 2.314152238313608
[2026-01-08 00:28:35] 2026-01-08 05:27:48,248 | INFO     | sum of square deviations: 265828240.0
[2026-01-08 00:28:35] 2026-01-08 05:27:48,249 | INFO     | sum of deviations: 7272345641.000002
[2026-01-08 00:28:35] 2026-01-08 05:27:48,249 | INFO     | mean x: 1767846876.0
[2026-01-08 00:28:35] 2026-01-08 05:27:48,249 | INFO     | mean y: 2680623.452631579
[2026-01-08 00:28:35] 2026-01-08 05:27:48,249 | INFO     | intersect: -48360854878.3965
[2026-01-08 00:28:35] 2026-01-08 05:27:48,250 | INFO     | chi2: 1.5440734881708833
[2026-01-08 00:28:35] 2026-01-08 05:27:48,250 | INFO     | current chi2=1.5440734881708833 (change=33.27692696241558 %)
[2026-01-08 00:28:35] 2026-01-08 05:27:48,250 | INFO     | sum of square deviations: 226022842.5
[2026-01-08 00:28:35] 2026-01-08 05:27:48,250 | INFO     | sum of deviations: 7143741049.000001
[2026-01-08 00:28:35] 2026-01-08 05:27:48,250 | INFO     | mean x: 1767846723.5
[2026-01-08 00:28:35] 2026-01-08 05:27:48,251 | INFO     | mean y: 2680130.6222222224
[2026-01-08 00:28:35] 2026-01-08 05:27:48,251 | INFO     | intersect: -55872376865.031235
[2026-01-08 00:28:35] 2026-01-08 05:27:48,251 | INFO     | chi2: 1.5480093807058106
[2026-01-08 00:28:35] 2026-01-08 05:27:48,251 | INFO     | current chi2=1.5480093807058106 (change=-0.25490318725631367 %)
[2026-01-08 00:28:35] 2026-01-08 05:27:48,251 | INFO     | right removable region: 89
[2026-01-08 00:28:35] 2026-01-08 05:27:48,251 | INFO     | sum of square deviations: 265828240.0
[2026-01-08 00:28:35] 2026-01-08 05:27:48,252 | INFO     | sum of deviations: -15347676982.000002
[2026-01-08 00:28:35] 2026-01-08 05:27:48,252 | INFO     | mean x: 1767847181.0
[2026-01-08 00:28:35] 2026-01-08 05:27:48,252 | INFO     | mean y: 2709526.3368421053
[2026-01-08 00:28:35] 2026-01-08 05:27:48,252 | INFO     | intersect: 102069922127.70415
[2026-01-08 00:28:35] 2026-01-08 05:27:48,252 | INFO     | chi2: 0.929882907498773
[2026-01-08 00:28:35] 2026-01-08 05:27:48,252 | INFO     | current chi2=0.929882907498773 (change=59.81755685285396 %)
[2026-01-08 00:28:35] 2026-01-08 05:27:48,253 | INFO     | sum of square deviations: 226022842.5
[2026-01-08 00:28:35] 2026-01-08 05:27:48,253 | INFO     | sum of deviations: -16077468568.5
[2026-01-08 00:28:35] 2026-01-08 05:27:48,253 | INFO     | mean x: 1767847333.5
[2026-01-08 00:28:35] 2026-01-08 05:27:48,253 | INFO     | mean y: 2711998.2555555557
[2026-01-08 00:28:35] 2026-01-08 05:27:48,253 | INFO     | intersect: 125753320316.76118
[2026-01-08 00:28:35] 2026-01-08 05:27:48,254 | INFO     | chi2: 0.8854274341030941
[2026-01-08 00:28:35] 2026-01-08 05:27:48,254 | INFO     | current chi2=0.8854274341030941 (change=4.7807603556512905 %)
[2026-01-08 00:28:35] 2026-01-08 05:27:48,254 | INFO     | left removable region: 20
[2026-01-08 00:28:35] 2026-01-08 05:27:48,254 | INFO     | sum of square deviations: 101843770.0
[2026-01-08 00:28:35] 2026-01-08 05:27:48,254 | INFO     | sum of deviations: -3425689728.0
[2026-01-08 00:28:35] 2026-01-08 05:27:48,254 | INFO     | mean x: 1767847303.0
[2026-01-08 00:28:35] 2026-01-08 05:27:48,255 | INFO     | mean y: 2717168.855072464
[2026-01-08 00:28:35] 2026-01-08 05:27:48,255 | INFO     | intersect: 59467290667.652336
[2026-01-08 00:28:35] 2026-01-08 05:27:48,255 | INFO     | chi2: 0.049383508180540645
[2026-01-08 00:28:35] 2026-01-08 05:27:48,255 | INFO     | current memory leak: -33.64 B/s (using 69 data points, chi2=0.05)
[2026-01-08 00:28:35] 2026-01-08 05:27:48,255 | INFO     | could have reported an average CPU frequency of 2144 MHz (7 samples)
[2026-01-08 00:28:35] 2026-01-08 05:27:48,255 | INFO     | ..............................
[2026-01-08 00:28:35] 2026-01-08 05:27:48,256 | INFO     | . Timing measurements:
[2026-01-08 00:28:35] 2026-01-08 05:27:48,256 | INFO     | . get job = 0 s
[2026-01-08 00:28:35] 2026-01-08 05:27:48,256 | INFO     | . initial setup = 2 s
[2026-01-08 00:28:35] 2026-01-08 05:27:48,256 | INFO     | . payload setup = 7 s
[2026-01-08 00:28:35] 2026-01-08 05:27:48,256 | INFO     | . stage-in = 0 s
[2026-01-08 00:28:35] 2026-01-08 05:27:48,256 | INFO     | . payload execution = 6051 s
[2026-01-08 00:28:35] 2026-01-08 05:27:48,256 | INFO     | . stage-out = 0 s
[2026-01-08 00:28:35] 2026-01-08 05:27:48,256 | INFO     | . log creation = 0 s
[2026-01-08 00:28:35] 2026-01-08 05:27:48,256 | INFO     | ..............................
[2026-01-08 00:28:35] 2026-01-08 05:27:48,336 | INFO     | 
[2026-01-08 00:28:35] 2026-01-08 05:27:48,337 | INFO     | job summary report
[2026-01-08 00:28:35] 2026-01-08 05:27:48,337 | INFO     | --------------------------------------------------
[2026-01-08 00:28:35] 2026-01-08 05:27:48,337 | INFO     | PanDA job id: 6962317374
[2026-01-08 00:28:35] 2026-01-08 05:27:48,337 | INFO     | task id: 47898826
[2026-01-08 00:28:35] 2026-01-08 05:27:48,337 | INFO     | errors: (none)
[2026-01-08 00:28:35] 2026-01-08 05:27:48,338 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 00:28:35] 2026-01-08 05:27:48,338 | INFO     | pilot state: finished 
[2026-01-08 00:28:35] 2026-01-08 05:27:48,338 | INFO     | transexitcode: 0
[2026-01-08 00:28:35] 2026-01-08 05:27:48,338 | INFO     | exeerrorcode: 0
[2026-01-08 00:28:35] 2026-01-08 05:27:48,338 | INFO     | exeerrordiag: 
[2026-01-08 00:28:35] 2026-01-08 05:27:48,338 | INFO     | exitcode: 0
[2026-01-08 00:28:35] 2026-01-08 05:27:48,338 | INFO     | exitmsg: OK
[2026-01-08 00:28:35] 2026-01-08 05:27:48,339 | INFO     | cpuconsumptiontime: 64353 s
[2026-01-08 00:28:35] 2026-01-08 05:27:48,339 | INFO     | nevents: 400
[2026-01-08 00:28:35] 2026-01-08 05:27:48,339 | INFO     | neventsw: 0
[2026-01-08 00:28:35] 2026-01-08 05:27:48,339 | INFO     | pid: 6306
[2026-01-08 00:28:35] 2026-01-08 05:27:48,339 | INFO     | pgrp: 6306
[2026-01-08 00:28:35] 2026-01-08 05:27:48,339 | INFO     | corecount: 12
[2026-01-08 00:28:35] 2026-01-08 05:27:48,340 | INFO     | event service: False
[2026-01-08 00:28:35] 2026-01-08 05:27:48,340 | INFO     | sizes: {0: 2283797, 1: 2283996, 6: 2284258, 11: 2284286, 6062: 2311036, 6063: 2320034, 6066: 2320218, 6072: 2320412}
[2026-01-08 00:28:35] 2026-01-08 05:27:48,340 | INFO     | --------------------------------------------------
[2026-01-08 00:28:35] 2026-01-08 05:27:48,340 | INFO     | 
[2026-01-08 00:28:35] 2026-01-08 05:27:48,340 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 00:28:35] 2026-01-08 05:27:48,365 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 00:28:35] 2026-01-08 05:27:48,366 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 00:28:35] 2026-01-08 05:27:48,366 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 00:28:35] 2026-01-08 05:27:48,366 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 00:28:35] 2026-01-08 05:27:48,366 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 00:28:35] 2026-01-08 05:27:48,366 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 00:28:35] 2026-01-08 05:27:48,366 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 00:28:35] 2026-01-08 05:27:48,367 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 00:28:35] 2026-01-08 05:27:48,367 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 00:28:35] 2026-01-08 05:27:48,367 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 00:28:35] 2026-01-08 05:27:48,367 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 00:28:35] 2026-01-08 05:27:48,367 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 00:28:35] 2026-01-08 05:27:48,367 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 00:28:35] 2026-01-08 05:27:48,368 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 00:28:35] 2026-01-08 05:27:48,368 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 00:28:35] 2026-01-08 05:27:48,368 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 00:28:35] 2026-01-08 05:27:48,368 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 00:28:35] 2026-01-08 05:27:48,368 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 00:28:35] 2026-01-08 05:27:48,368 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 00:28:35] 2026-01-08 05:27:48,369 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 00:28:35] 2026-01-08 05:27:48,369 | INFO     | job 6962317374 has completed (purged errors)
[2026-01-08 00:28:35] 2026-01-08 05:27:48,369 | INFO     | overall cleanup function is called
[2026-01-08 00:28:35] 2026-01-08 05:27:49,378 | INFO     | --- collectZombieJob: --- 10, [6306]
[2026-01-08 00:28:35] 2026-01-08 05:27:49,378 | INFO     | zombie collector waiting for pid 6306
[2026-01-08 00:28:35] 2026-01-08 05:27:49,378 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 00:28:35] 2026-01-08 05:27:49,378 | INFO     | collected zombie processes
[2026-01-08 00:28:35] 2026-01-08 05:27:49,378 | INFO     | will attempt to kill all subprocesses of pid=6306
[2026-01-08 00:28:35] 2026-01-08 05:27:49,470 | INFO     | process IDs to be killed: [6306] (in reverse order)
[2026-01-08 00:28:35] 2026-01-08 05:27:49,520 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 00:28:35] 2026-01-08 05:27:49,520 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 00:28:35] 2026-01-08 05:27:49,524 | INFO     | did not find any defunct processes belonging to 6306
[2026-01-08 00:28:35] 2026-01-08 05:27:49,526 | INFO     | did not find any defunct processes belonging to 6306
[2026-01-08 00:28:35] 2026-01-08 05:27:49,527 | INFO     | ready for new job
[2026-01-08 00:28:35] 2026-01-08 05:27:49,527 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 00:28:35] 2026-01-08 05:27:49,528 | INFO     | ***************************************
[2026-01-08 00:28:35] 2026-01-08 05:27:49,528 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 00:28:35] 2026-01-08 05:27:49,528 | INFO     | ***************************************
[2026-01-08 00:28:35] 2026-01-08 05:27:49,528 | INFO     | 
[2026-01-08 00:28:35] 2026-01-08 05:27:49,529 | INFO     | architecture information:
[2026-01-08 00:28:35] 2026-01-08 05:27:49,529 | INFO     | executing command: cat /etc/os-release
[2026-01-08 00:28:35] 2026-01-08 05:27:49,544 | INFO     | cat /etc/os-release:
[2026-01-08 00:28:35] NAME="CentOS Linux"
[2026-01-08 00:28:35] VERSION="7 (Core)"
[2026-01-08 00:28:35] ID="centos"
[2026-01-08 00:28:35] ID_LIKE="rhel fedora"
[2026-01-08 00:28:35] VERSION_ID="7"
[2026-01-08 00:28:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 00:28:35] ANSI_COLOR="0;31"
[2026-01-08 00:28:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 00:28:35] HOME_URL="https://www.centos.org/"
[2026-01-08 00:28:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 00:28:35] 
[2026-01-08 00:28:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 00:28:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 00:28:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 00:28:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 00:28:35] 
[2026-01-08 00:28:35] 2026-01-08 05:27:49,544 | INFO     | ***************************************
[2026-01-08 00:28:35] 2026-01-08 05:27:50,047 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 00:28:35] 2026-01-08 05:27:50,064 | INFO     | sufficient remaining disk space (29310844928 B)
[2026-01-08 00:28:35] 2026-01-08 05:27:50,064 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 00:28:35] 2026-01-08 05:27:50,064 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 00:28:35] 2026-01-08 05:27:50,065 | INFO     | update_server=False
[2026-01-08 00:28:35] 2026-01-08 05:27:50,065 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 00:28:35] 2026-01-08 05:27:50,065 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 00:28:35] 2026-01-08 05:27:50,402 | INFO     | all data control threads have been joined
[2026-01-08 00:28:35] 2026-01-08 05:27:50,473 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 00:28:35] 2026-01-08 05:27:50,473 | INFO     | aborting loop
[2026-01-08 00:28:35] 2026-01-08 05:27:50,584 | INFO     | all job control threads have been joined
[2026-01-08 00:28:35] 2026-01-08 05:27:51,070 | INFO     | [job] retrieve thread has finished
[2026-01-08 00:28:35] 2026-01-08 05:27:51,071 | INFO     | [job] queue monitor thread has finished
[2026-01-08 00:28:35] 2026-01-08 05:27:51,085 | INFO     | all payload control threads have been joined
[2026-01-08 00:28:35] 2026-01-08 05:27:51,408 | INFO     | [data] control thread has finished
[2026-01-08 00:28:35] 2026-01-08 05:27:51,439 | INFO     | [payload] validate_post thread has finished
[2026-01-08 00:28:35] 2026-01-08 05:27:51,462 | INFO     | [data] copytool_in thread has finished
[2026-01-08 00:28:35] 2026-01-08 05:27:51,479 | INFO     | [job] job monitor thread has finished
[2026-01-08 00:28:35] 2026-01-08 05:27:51,487 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 00:28:35] 2026-01-08 05:27:51,504 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 00:28:35] 2026-01-08 05:27:51,589 | INFO     | [job] control thread has finished
[2026-01-08 00:28:35] 2026-01-08 05:27:51,838 | INFO     | [payload] failed_post thread has finished
[2026-01-08 00:28:35] 2026-01-08 05:27:52,059 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 00:28:35] 2026-01-08 05:27:52,090 | INFO     | [payload] control thread has finished
[2026-01-08 00:28:35] 2026-01-08 05:27:52,118 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 00:28:35] 2026-01-08 05:27:52,414 | INFO     | [job] validate thread has finished
[2026-01-08 00:28:35] 2026-01-08 05:27:52,442 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 00:28:35] 2026-01-08 05:27:53,509 | INFO     | [data] copytool_out thread has finished
[2026-01-08 00:28:35] 2026-01-08 05:27:56,124 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 00:28:35] 2026-01-08 05:28:00,348 | INFO     | job.realtimelogging is not enabled
[2026-01-08 00:28:35] 2026-01-08 05:28:01,353 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 00:28:35] 2026-01-08 05:28:20,380 | INFO     | PID=32214 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 00:28:35] 2026-01-08 05:28:20,380 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 00:28:35] 2026-01-08 05:28:20,380 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 00:28:35] 2026-01-08 05:28:20,381 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 00:28:35] 2026-01-08 05:28:29,022 | INFO     | [monitor] cgroup control has ended
[2026-01-08 00:28:35] 2026-01-08 05:28:29,679 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140399215257408)>', '<ExcThread(monitor, started 140398018148096)>']
[2026-01-08 00:28:35] 2026-01-08 05:28:30,430 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 00:28:35] 2026-01-08 05:28:30,430 | INFO     | [monitor] control thread has ended
[2026-01-08 00:28:35] 2026-01-08 05:28:34,704 | INFO     | all workflow threads have been joined
[2026-01-08 00:28:35] 2026-01-08 05:28:34,704 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 00:28:35] 2026-01-08 05:28:34,705 | INFO     | traces error code: 0
[2026-01-08 00:28:35] 2026-01-08 05:28:34,705 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 00:28:35] 2026-01-08 05:28:34,791 [wrapper] ==== pilot stdout END ====
[2026-01-08 00:28:35] 2026-01-08 05:28:34,795 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 00:28:35] 2026-01-08 05:28:34,798 [wrapper] pilotpid: 32214
[2026-01-08 00:28:35] 2026-01-08 05:28:34,802 [wrapper] Pilot exit status: 0
[2026-01-08 00:28:35] 2026-01-08 05:28:34,817 [wrapper] pandaids: 6962317374
[2026-01-08 00:28:35] 2026-01-08 05:28:34,864 [wrapper] cleanup supervisor_pilot  5509 32215
[2026-01-08 00:28:35] 2026-01-08 05:28:34,868 [wrapper] Test setup, not cleaning
[2026-01-08 00:28:35] 2026-01-08 05:28:34,872 [wrapper] apfmon messages muted
[2026-01-08 00:28:35] 2026-01-08 05:28:34,876 [wrapper] ==== wrapper stdout END ====
[2026-01-08 00:28:35] 2026-01-08 05:28:34,880 [wrapper] ==== wrapper stderr END ====
[2026-01-08 00:28:35]  *** Error codes and diagnostics ***
[2026-01-08 00:28:35]     "exeErrorCode": 0,
[2026-01-08 00:28:35]     "exeErrorDiag": "",
[2026-01-08 00:28:35]     "pilotErrorCode": 0,
[2026-01-08 00:28:35]     "pilotErrorDiag": "",
[2026-01-08 00:28:35]  *** Listing of results directory ***
[2026-01-08 00:28:35] total 440116
[2026-01-08 00:28:35] -rw-r--r-- 1 boincer umatlas    579449 Jan  7 15:55 pilot3.tar.gz
[2026-01-08 00:28:35] -rwx------ 1 boincer umatlas     36322 Jan  7 15:56 runpilot2-wrapper.sh
[2026-01-08 00:28:35] -rw-r--r-- 1 boincer umatlas      5112 Jan  7 15:59 queuedata.json
[2026-01-08 00:28:35] -rw-r--r-- 1 boincer umatlas       100 Jan  7 22:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 00:28:35] -rwxr-xr-x 1 boincer umatlas      7986 Jan  7 22:46 run_atlas
[2026-01-08 00:28:35] -rw-r--r-- 1 boincer umatlas       105 Jan  7 22:46 job.xml
[2026-01-08 00:28:35] -rw-r--r-- 2 boincer umatlas 223564477 Jan  7 22:46 EVNT.47898824._000535.pool.root.1
[2026-01-08 00:28:35] -rw-r--r-- 2 boincer umatlas     15847 Jan  7 22:46 start_atlas.sh
[2026-01-08 00:28:35] drwxrwx--x 2 boincer umatlas      4096 Jan  7 22:46 shared
[2026-01-08 00:28:35] -rw-r--r-- 2 boincer umatlas    592400 Jan  7 22:46 input.tar.gz
[2026-01-08 00:28:35] -rw-r--r-- 1 boincer umatlas         0 Jan  7 22:46 boinc_lockfile
[2026-01-08 00:28:35] -rw-r--r-- 1 boincer umatlas      2518 Jan  7 22:46 pandaJob.out
[2026-01-08 00:28:35] -rw------- 1 boincer umatlas        57 Jan  7 22:46 setup.sh.local
[2026-01-08 00:28:35] -rw------- 1 boincer umatlas    989835 Jan  7 22:46 agis_schedconf.cvmfs.json
[2026-01-08 00:28:35] -rw------- 1 boincer umatlas   1516240 Jan  7 22:46 agis_ddmendpoints.agis.ALL.json
[2026-01-08 00:28:35] drwx------ 5 boincer umatlas      4096 Jan  7 22:46 pilot3
[2026-01-08 00:28:35] -rw-r--r-- 1 boincer umatlas      5952 Jan  8 00:18 init_data.xml
[2026-01-08 00:28:35] -rw------- 1 boincer umatlas 220628401 Jan  8 00:27 HITS.47898826._012613.pool.root.1
[2026-01-08 00:28:35] -rw-r--r-- 1 boincer umatlas       529 Jan  8 00:27 boinc_task_state.xml
[2026-01-08 00:28:35] -rw------- 1 boincer umatlas      1045 Jan  8 00:27 memory_monitor_summary.json
[2026-01-08 00:28:35] -rw------- 1 boincer umatlas    418341 Jan  8 00:27 log.47898826._012613.job.log.tgz.1
[2026-01-08 00:28:35] -rw------- 1 boincer umatlas        95 Jan  8 00:27 pilot_heartbeat.json
[2026-01-08 00:28:35] -rw------- 1 boincer umatlas      7852 Jan  8 00:27 heartbeat.json
[2026-01-08 00:28:35] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 00:28 boinc_mmap_file
[2026-01-08 00:28:35] -rw-r--r-- 1 boincer umatlas        27 Jan  8 00:28 wrapper_checkpoint.txt
[2026-01-08 00:28:35] -rw------- 1 boincer umatlas      4818 Jan  8 00:28 pilotlog.txt
[2026-01-08 00:28:35] -rw------- 1 boincer umatlas    866433 Jan  8 00:28 log.47898826._012613.job.log.1
[2026-01-08 00:28:35] -rw------- 1 boincer umatlas       357 Jan  8 00:28 output.list
[2026-01-08 00:28:35] -rw-r--r-- 1 boincer umatlas       620 Jan  8 00:28 runtime_log
[2026-01-08 00:28:35] -rw------- 1 boincer umatlas   1300480 Jan  8 00:28 result.tar.gz
[2026-01-08 00:28:35] -rw-r--r-- 1 boincer umatlas      9344 Jan  8 00:28 runtime_log.err
[2026-01-08 00:28:35] -rw------- 1 boincer umatlas       659 Jan  8 00:28 ifBMDmClpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4kiKDmeHr2rm.diag
[2026-01-08 00:28:35] -rw-r--r-- 1 boincer umatlas     21145 Jan  8 00:28 stderr.txt
[2026-01-08 00:28:35] HITS file was successfully produced:
[2026-01-08 00:28:35] -rw------- 1 boincer umatlas 220628401 Jan  8 00:27 shared/HITS.pool.root.1
[2026-01-08 00:28:35]  *** Contents of shared directory: ***
[2026-01-08 00:28:35] total 435660
[2026-01-08 00:28:35] -rw-r--r-- 2 boincer umatlas 223564477 Jan  7 22:46 ATLAS.root_0
[2026-01-08 00:28:35] -rw-r--r-- 2 boincer umatlas     15847 Jan  7 22:46 start_atlas.sh
[2026-01-08 00:28:35] -rw-r--r-- 2 boincer umatlas    592400 Jan  7 22:46 input.tar.gz
[2026-01-08 00:28:35] -rw------- 1 boincer umatlas 220628401 Jan  8 00:27 HITS.pool.root.1
[2026-01-08 00:28:35] -rw------- 1 boincer umatlas   1300480 Jan  8 00:28 result.tar.gz
00:28:36 (28528): run_atlas exited; CPU time 64337.754636
00:28:36 (28528): called boinc_finish(0)

</stderr_txt>
]]>

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