Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:01:12 (26835): wrapper (7.7.26015): starting
13:01:12 (26835): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 13:01:12] Arguments: --nthreads 8
[2026-01-08 13:01:12] Threads: 8
[2026-01-08 13:01:12] Checking for CVMFS
[2026-01-08 13:01:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 13:01:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 13:01:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 13:01:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 13:01:16] 2.11.2.0 22677 33947 104400 154906 3 60 21836883 25165824 96 130560 0 6362350 99.674 8798074 2611 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 13:01:16] CVMFS is ok
[2026-01-08 13:01:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 13:01:16] Checking for apptainer binary...
[2026-01-08 13:01:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 13:01:16] Running /usr/bin/apptainer --version
[2026-01-08 13:01:16] apptainer version 1.3.2-1.el7
[2026-01-08 13:01:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 13:01:33] cg-vwn370.simple-grid.lan
[2026-01-08 13:01:33] apptainer works
[2026-01-08 13:01:33] Set ATHENA_PROC_NUMBER=8
[2026-01-08 13:01:33] Set ATHENA_CORE_NUMBER=8
[2026-01-08 13:01:33] Starting ATLAS job with PandaID=6962324267
[2026-01-08 13:01:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 19:26:56]  *** The last 200 lines of the pilot log: ***
[2026-01-08 19:26:56] 2026-01-08 18:25:42,728 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 19:26:56] 2026-01-08 18:25:42,729 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 19:26:56] 2026-01-08 18:25:42,731 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6962324267/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 19:26:56] 2026-01-08 18:25:42,732 | INFO     | extracted standard info from prmon json
[2026-01-08 19:26:56] 2026-01-08 18:25:42,732 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 19:26:56] 2026-01-08 18:25:42,732 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 19:26:56] 2026-01-08 18:25:42,732 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 19:26:56] 2026-01-08 18:25:42,732 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 19:26:56] 2026-01-08 18:25:42,740 | INFO     | fitting pss+swap vs Time
[2026-01-08 19:26:56] 2026-01-08 18:25:42,741 | INFO     | sum of square deviations: 14831839022.0
[2026-01-08 19:26:56] 2026-01-08 18:25:42,746 | INFO     | sum of deviations: 184132090032.99994
[2026-01-08 19:26:56] 2026-01-08 18:25:42,746 | INFO     | mean x: 1767885565.0
[2026-01-08 19:26:56] 2026-01-08 18:25:42,746 | INFO     | mean y: 2442663.829201102
[2026-01-08 19:26:56] 2026-01-08 18:25:42,746 | INFO     | intersect: -21945237832.147865
[2026-01-08 19:26:56] 2026-01-08 18:25:42,747 | INFO     | chi2: 9.027125352984886
[2026-01-08 19:26:56] 2026-01-08 18:25:42,748 | INFO     | sum of square deviations: 14227353269.5
[2026-01-08 19:26:56] 2026-01-08 18:25:42,752 | INFO     | sum of deviations: 230037131506.49997
[2026-01-08 19:26:56] 2026-01-08 18:25:42,752 | INFO     | mean x: 1767885412.5
[2026-01-08 19:26:56] 2026-01-08 18:25:42,752 | INFO     | mean y: 2454141.751396648
[2026-01-08 19:26:56] 2026-01-08 18:25:42,753 | INFO     | intersect: -28581870814.56408
[2026-01-08 19:26:56] 2026-01-08 18:25:42,753 | INFO     | chi2: 7.515845934104883
[2026-01-08 19:26:56] 2026-01-08 18:25:42,753 | INFO     | current chi2=7.515845934104883 (change=16.741535757895363 %)
[2026-01-08 19:26:56] 2026-01-08 18:25:42,753 | INFO     | right removable region: 357
[2026-01-08 19:26:56] 2026-01-08 18:25:42,754 | INFO     | sum of square deviations: 14227353269.5
[2026-01-08 19:26:56] 2026-01-08 18:25:42,758 | INFO     | sum of deviations: 56169391761.00001
[2026-01-08 19:26:56] 2026-01-08 18:25:42,759 | INFO     | mean x: 1767885717.5
[2026-01-08 19:26:56] 2026-01-08 18:25:42,759 | INFO     | mean y: 2474933.74301676
[2026-01-08 19:26:56] 2026-01-08 18:25:42,759 | INFO     | intersect: -6977113157.867214
[2026-01-08 19:26:56] 2026-01-08 18:25:42,760 | INFO     | chi2: 4.1576365987651345
[2026-01-08 19:26:56] 2026-01-08 18:25:42,760 | INFO     | current chi2=4.1576365987651345 (change=53.942850728328686 %)
[2026-01-08 19:26:56] 2026-01-08 18:25:42,761 | INFO     | sum of square deviations: 13639518992.0
[2026-01-08 19:26:56] 2026-01-08 18:25:42,765 | INFO     | sum of deviations: -34743265347.0
[2026-01-08 19:26:56] 2026-01-08 18:25:42,765 | INFO     | mean x: 1767885870.0
[2026-01-08 19:26:56] 2026-01-08 18:25:42,765 | INFO     | mean y: 2498489.416430595
[2026-01-08 19:26:56] 2026-01-08 18:25:42,765 | INFO     | intersect: 4505745848.8466215
[2026-01-08 19:26:56] 2026-01-08 18:25:42,766 | INFO     | chi2: 1.7930852717436292
[2026-01-08 19:26:56] 2026-01-08 18:25:42,766 | INFO     | current chi2=1.7930852717436292 (change=56.87248682878644 %)
[2026-01-08 19:26:56] 2026-01-08 18:25:42,767 | INFO     | sum of square deviations: 13068103627.0
[2026-01-08 19:26:56] 2026-01-08 18:25:42,771 | INFO     | sum of deviations: -47472531359.0
[2026-01-08 19:26:56] 2026-01-08 18:25:42,771 | INFO     | mean x: 1767886022.5
[2026-01-08 19:26:56] 2026-01-08 18:25:42,771 | INFO     | mean y: 2501868.1379310344
[2026-01-08 19:26:56] 2026-01-08 18:25:42,771 | INFO     | intersect: 6424705658.201971
[2026-01-08 19:26:56] 2026-01-08 18:25:42,772 | INFO     | chi2: 1.721377356619787
[2026-01-08 19:26:56] 2026-01-08 18:25:42,772 | INFO     | current chi2=1.721377356619787 (change=3.999135805410533 %)
[2026-01-08 19:26:56] 2026-01-08 18:25:42,772 | INFO     | left removable region: 30
[2026-01-08 19:26:56] 2026-01-08 18:25:42,773 | INFO     | sum of square deviations: 10842205148.0
[2026-01-08 19:26:56] 2026-01-08 18:25:42,776 | INFO     | sum of deviations: 21934742950.000004
[2026-01-08 19:26:56] 2026-01-08 18:25:42,777 | INFO     | mean x: 1767886297.0
[2026-01-08 19:26:56] 2026-01-08 18:25:42,777 | INFO     | mean y: 2508227.886850153
[2026-01-08 19:26:56] 2026-01-08 18:25:42,777 | INFO     | intersect: -3574082600.2875776
[2026-01-08 19:26:56] 2026-01-08 18:25:42,777 | INFO     | chi2: 0.0031006951331561798
[2026-01-08 19:26:56] 2026-01-08 18:25:42,778 | INFO     | current memory leak: 2.02 B/s (using 327 data points, chi2=0.00)
[2026-01-08 19:26:56] 2026-01-08 18:25:42,778 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-08 19:26:56] 2026-01-08 18:25:42,779 | INFO     | ..............................
[2026-01-08 19:26:56] 2026-01-08 18:25:42,779 | INFO     | . Timing measurements:
[2026-01-08 19:26:56] 2026-01-08 18:25:42,779 | INFO     | . get job = 0 s
[2026-01-08 19:26:56] 2026-01-08 18:25:42,779 | INFO     | . initial setup = 10 s
[2026-01-08 19:26:56] 2026-01-08 18:25:42,779 | INFO     | . payload setup = 156 s
[2026-01-08 19:26:56] 2026-01-08 18:25:42,779 | INFO     | . stage-in = 0 s
[2026-01-08 19:26:56] 2026-01-08 18:25:42,780 | INFO     | . payload execution = 22270 s
[2026-01-08 19:26:56] 2026-01-08 18:25:42,780 | INFO     | . stage-out = 5 s
[2026-01-08 19:26:56] 2026-01-08 18:25:42,780 | INFO     | . log creation = 1 s
[2026-01-08 19:26:56] 2026-01-08 18:25:42,780 | INFO     | ..............................
[2026-01-08 19:26:56] 2026-01-08 18:25:42,956 | INFO     | 
[2026-01-08 19:26:56] 2026-01-08 18:25:42,957 | INFO     | job summary report
[2026-01-08 19:26:56] 2026-01-08 18:25:42,957 | INFO     | --------------------------------------------------
[2026-01-08 19:26:56] 2026-01-08 18:25:42,957 | INFO     | PanDA job id: 6962324267
[2026-01-08 19:26:56] 2026-01-08 18:25:42,957 | INFO     | task id: 47898826
[2026-01-08 19:26:56] 2026-01-08 18:25:42,957 | INFO     | errors: (none)
[2026-01-08 19:26:56] 2026-01-08 18:25:42,957 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 19:26:56] 2026-01-08 18:25:42,957 | INFO     | pilot state: finished 
[2026-01-08 19:26:56] 2026-01-08 18:25:42,957 | INFO     | transexitcode: 0
[2026-01-08 19:26:56] 2026-01-08 18:25:42,957 | INFO     | exeerrorcode: 0
[2026-01-08 19:26:56] 2026-01-08 18:25:42,958 | INFO     | exeerrordiag: 
[2026-01-08 19:26:56] 2026-01-08 18:25:42,958 | INFO     | exitcode: 0
[2026-01-08 19:26:56] 2026-01-08 18:25:42,958 | INFO     | exitmsg: OK
[2026-01-08 19:26:56] 2026-01-08 18:25:42,958 | INFO     | cpuconsumptiontime: 83748 s
[2026-01-08 19:26:56] 2026-01-08 18:25:42,958 | INFO     | nevents: 400
[2026-01-08 19:26:56] 2026-01-08 18:25:42,958 | INFO     | neventsw: 0
[2026-01-08 19:26:56] 2026-01-08 18:25:42,958 | INFO     | pid: 4661
[2026-01-08 19:26:56] 2026-01-08 18:25:42,958 | INFO     | pgrp: 4661
[2026-01-08 19:26:56] 2026-01-08 18:25:42,958 | INFO     | corecount: 8
[2026-01-08 19:26:56] 2026-01-08 18:25:42,958 | INFO     | event service: False
[2026-01-08 19:26:56] 2026-01-08 18:25:42,959 | INFO     | sizes: {0: 2283141, 1: 2283826, 2: 2284025, 13: 2284025, 24: 2284081, 35: 2284109, 45: 2284265, 56: 2284293, 67: 2284321, 78: 2284349, 88: 2284405, 99: 2284713, 10
[2026-01-08 19:26:56] 2026-01-08 18:25:42,959 | INFO     | --------------------------------------------------
[2026-01-08 19:26:56] 2026-01-08 18:25:42,959 | INFO     | 
[2026-01-08 19:26:56] 2026-01-08 18:25:42,959 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-08 19:26:56] 2026-01-08 18:25:43,265 | INFO     | time since job start (22776s) is within the limit (174528.0s)
[2026-01-08 19:26:56] 2026-01-08 18:25:43,496 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 19:26:56] 2026-01-08 18:25:43,496 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 19:26:56] 2026-01-08 18:25:43,496 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 19:26:56] 2026-01-08 18:25:43,496 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 19:26:56] 2026-01-08 18:25:43,496 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 19:26:56] 2026-01-08 18:25:43,496 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 19:26:56] 2026-01-08 18:25:43,497 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 19:26:56] 2026-01-08 18:25:43,497 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 19:26:56] 2026-01-08 18:25:43,497 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 19:26:56] 2026-01-08 18:25:43,497 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 19:26:56] 2026-01-08 18:25:43,497 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 19:26:56] 2026-01-08 18:25:43,497 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 19:26:56] 2026-01-08 18:25:43,497 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 19:26:56] 2026-01-08 18:25:43,497 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 19:26:56] 2026-01-08 18:25:43,497 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 19:26:56] 2026-01-08 18:25:43,497 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 19:26:56] 2026-01-08 18:25:43,498 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 19:26:56] 2026-01-08 18:25:43,498 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 19:26:56] 2026-01-08 18:25:43,498 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 19:26:56] 2026-01-08 18:25:43,498 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 19:26:56] 2026-01-08 18:25:43,498 | INFO     | job 6962324267 has completed (purged errors)
[2026-01-08 19:26:56] 2026-01-08 18:25:43,498 | INFO     | overall cleanup function is called
[2026-01-08 19:26:56] 2026-01-08 18:25:44,511 | INFO     | --- collectZombieJob: --- 10, [4661]
[2026-01-08 19:26:56] 2026-01-08 18:25:44,512 | INFO     | zombie collector waiting for pid 4661
[2026-01-08 19:26:56] 2026-01-08 18:25:44,512 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 19:26:56] 2026-01-08 18:25:44,512 | INFO     | collected zombie processes
[2026-01-08 19:26:56] 2026-01-08 18:25:44,512 | INFO     | will attempt to kill all subprocesses of pid=4661
[2026-01-08 19:26:56] 2026-01-08 18:25:44,579 | INFO     | process IDs to be killed: [4661] (in reverse order)
[2026-01-08 19:26:56] 2026-01-08 18:25:45,428 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 19:26:56] 2026-01-08 18:25:45,428 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 19:26:56] 2026-01-08 18:25:45,430 | INFO     | did not find any defunct processes belonging to 4661
[2026-01-08 19:26:56] 2026-01-08 18:25:45,432 | INFO     | did not find any defunct processes belonging to 4661
[2026-01-08 19:26:56] 2026-01-08 18:25:45,432 | INFO     | ready for new job
[2026-01-08 19:26:56] 2026-01-08 18:25:45,432 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 19:26:56] 2026-01-08 18:25:45,434 | INFO     | ***************************************
[2026-01-08 19:26:56] 2026-01-08 18:25:45,434 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 19:26:56] 2026-01-08 18:25:45,434 | INFO     | ***************************************
[2026-01-08 19:26:56] 2026-01-08 18:25:45,434 | INFO     | 
[2026-01-08 19:26:56] 2026-01-08 18:25:45,435 | INFO     | pilot is running in a VM
[2026-01-08 19:26:56] 2026-01-08 18:25:45,435 | INFO     | architecture information:
[2026-01-08 19:26:56] 2026-01-08 18:25:45,443 | INFO     | executing command: cat /etc/os-release
[2026-01-08 19:26:56] 2026-01-08 18:25:45,632 | INFO     | cat /etc/os-release:
[2026-01-08 19:26:56] NAME="CentOS Linux"
[2026-01-08 19:26:56] VERSION="7 (Core)"
[2026-01-08 19:26:56] ID="centos"
[2026-01-08 19:26:56] ID_LIKE="rhel fedora"
[2026-01-08 19:26:56] VERSION_ID="7"
[2026-01-08 19:26:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 19:26:56] ANSI_COLOR="0;31"
[2026-01-08 19:26:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 19:26:56] HOME_URL="https://www.centos.org/"
[2026-01-08 19:26:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 19:26:56] 
[2026-01-08 19:26:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 19:26:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 19:26:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 19:26:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 19:26:56] 
[2026-01-08 19:26:56] 2026-01-08 18:25:45,632 | INFO     | ***************************************
[2026-01-08 19:26:56] 2026-01-08 18:25:46,135 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-08 19:26:56] 2026-01-08 18:25:46,400 | INFO     | sufficient remaining disk space (496472424448 B)
[2026-01-08 19:26:56] 2026-01-08 18:25:46,400 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 19:26:56] 2026-01-08 18:25:46,400 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 19:26:56] 2026-01-08 18:25:46,401 | INFO     | update_server=False
[2026-01-08 19:26:56] 2026-01-08 18:25:46,401 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 19:26:56] 2026-01-08 18:25:46,406 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 19:26:56] 2026-01-08 18:25:46,718 | INFO     | all payload control threads have been joined
[2026-01-08 19:26:56] 2026-01-08 18:25:46,889 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 19:26:56] 2026-01-08 18:25:46,890 | INFO     | aborting loop
[2026-01-08 19:26:56] 2026-01-08 18:25:47,274 | INFO     | all job control threads have been joined
[2026-01-08 19:26:56] 2026-01-08 18:25:47,344 | INFO     | all data control threads have been joined
[2026-01-08 19:26:56] 2026-01-08 18:25:47,406 | INFO     | [job] retrieve thread has finished
[2026-01-08 19:26:56] 2026-01-08 18:25:47,545 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 19:26:56] 2026-01-08 18:25:47,626 | INFO     | [data] copytool_in thread has finished
[2026-01-08 19:26:56] 2026-01-08 18:25:47,724 | INFO     | [payload] control thread has finished
[2026-01-08 19:26:56] 2026-01-08 18:25:47,775 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 19:26:56] 2026-01-08 18:25:47,813 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 19:26:56] 2026-01-08 18:25:47,895 | INFO     | [job] job monitor thread has finished
[2026-01-08 19:26:56] 2026-01-08 18:25:47,974 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 19:26:56] 2026-01-08 18:25:48,136 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 19:26:56] 2026-01-08 18:25:48,190 | INFO     | [job] validate thread has finished
[2026-01-08 19:26:56] 2026-01-08 18:25:48,280 | INFO     | [job] control thread has finished
[2026-01-08 19:26:56] 2026-01-08 18:25:48,350 | INFO     | [data] control thread has finished
[2026-01-08 19:26:56] 2026-01-08 18:25:48,410 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 19:26:56] 2026-01-08 18:25:48,413 | INFO     | [data] copytool_out thread has finished
[2026-01-08 19:26:56] 2026-01-08 18:25:48,653 | INFO     | [payload] failed_post thread has finished
[2026-01-08 19:26:56] 2026-01-08 18:25:48,817 | INFO     | [payload] validate_post thread has finished
[2026-01-08 19:26:56] 2026-01-08 18:25:48,980 | INFO     | [job] queue monitor thread has finished
[2026-01-08 19:26:56] 2026-01-08 18:25:52,148 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 19:26:56] 2026-01-08 18:26:16,406 | INFO     | PID=30573 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 19:26:56] 2026-01-08 18:26:16,407 | INFO     | .. there are 2 such processes running
[2026-01-08 19:26:56] 2026-01-08 18:26:16,408 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 19:26:56] 2026-01-08 18:26:16,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 19:26:56] 2026-01-08 18:26:16,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 19:26:56] 2026-01-08 18:26:45,982 | INFO     | [monitor] cgroup control has ended
[2026-01-08 19:26:56] 2026-01-08 18:26:46,025 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140300846262080)>', '<ExcThread(monitor, started 140300257318656)>']
[2026-01-08 19:26:56] 2026-01-08 18:26:46,588 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 19:26:56] 2026-01-08 18:26:46,589 | INFO     | [monitor] control thread has ended
[2026-01-08 19:26:56] 2026-01-08 18:26:51,051 | INFO     | all workflow threads have been joined
[2026-01-08 19:26:56] 2026-01-08 18:26:51,052 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 19:26:56] 2026-01-08 18:26:51,052 | INFO     | traces error code: 0
[2026-01-08 19:26:56] 2026-01-08 18:26:51,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 19:26:56] 2026-01-08 18:26:51,484 [wrapper] ==== pilot stdout END ====
[2026-01-08 19:26:56] 2026-01-08 18:26:51,597 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 19:26:56] 2026-01-08 18:26:51,703 [wrapper] pilotpid: 30573
[2026-01-08 19:26:56] 2026-01-08 18:26:51,817 [wrapper] Pilot exit status: 0
[2026-01-08 19:26:56] 2026-01-08 18:26:52,347 [wrapper] pandaids: 6962324267
[2026-01-08 19:26:56] 2026-01-08 18:26:53,470 [wrapper] cleanup supervisor_pilot  6283 30574
[2026-01-08 19:26:56] 2026-01-08 18:26:53,605 [wrapper] Test setup, not cleaning
[2026-01-08 19:26:56] 2026-01-08 18:26:53,712 [wrapper] apfmon messages muted
[2026-01-08 19:26:56] 2026-01-08 18:26:53,777 [wrapper] ==== wrapper stdout END ====
[2026-01-08 19:26:56] 2026-01-08 18:26:53,830 [wrapper] ==== wrapper stderr END ====
[2026-01-08 19:26:56]  *** Error codes and diagnostics ***
[2026-01-08 19:26:56]     "exeErrorCode": 0,
[2026-01-08 19:26:56]     "exeErrorDiag": "",
[2026-01-08 19:26:56]     "pilotErrorCode": 0,
[2026-01-08 19:26:56]     "pilotErrorDiag": "",
[2026-01-08 19:26:56]  *** Listing of results directory ***
[2026-01-08 19:26:56] total 452896
[2026-01-08 19:26:56] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 19:26:56] -rwx------. 1 boinc boinc     36322 Jan  7 22:10 runpilot2-wrapper.sh
[2026-01-08 19:26:56] -rw-r--r--. 1 boinc boinc      5112 Jan  7 22:16 queuedata.json
[2026-01-08 19:26:56] -rw-r--r--. 1 boinc boinc       100 Jan  8 13:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 19:26:56] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 13:01 run_atlas
[2026-01-08 19:26:56] -rw-r--r--. 1 boinc boinc       105 Jan  8 13:01 job.xml
[2026-01-08 19:26:56] -rw-r--r--. 1 boinc boinc      6390 Jan  8 13:01 init_data.xml
[2026-01-08 19:26:56] -rw-r--r--. 2 boinc boinc 225580255 Jan  8 13:01 EVNT.47898824._000775.pool.root.1
[2026-01-08 19:26:56] -rw-r--r--. 2 boinc boinc     15847 Jan  8 13:01 start_atlas.sh
[2026-01-08 19:26:56] drwxrwx--x. 2 boinc boinc        68 Jan  8 13:01 shared
[2026-01-08 19:26:56] -rw-r--r--. 2 boinc boinc    592401 Jan  8 13:01 input.tar.gz
[2026-01-08 19:26:56] -rw-r--r--. 1 boinc boinc         0 Jan  8 13:01 boinc_lockfile
[2026-01-08 19:26:56] -rw-r--r--. 1 boinc boinc      2519 Jan  8 13:01 pandaJob.out
[2026-01-08 19:26:56] -rw-------. 1 boinc boinc    989835 Jan  8 13:05 agis_schedconf.cvmfs.json
[2026-01-08 19:26:56] drwx------. 5 boinc boinc      4096 Jan  8 13:06 pilot3
[2026-01-08 19:26:56] -rw-------. 1 boinc boinc 227092032 Jan  8 19:22 HITS.47898826._016779.pool.root.1
[2026-01-08 19:26:56] -rw-r--r--. 1 boinc boinc       531 Jan  8 19:22 boinc_task_state.xml
[2026-01-08 19:26:56] -rw-------. 1 boinc boinc      1015 Jan  8 19:23 memory_monitor_summary.json
[2026-01-08 19:26:56] -rw-------. 1 boinc boinc   1516240 Jan  8 19:23 agis_ddmendpoints.agis.ALL.json
[2026-01-08 19:26:56] -rw-------. 1 boinc boinc    568608 Jan  8 19:23 log.47898826._016779.job.log.tgz.1
[2026-01-08 19:26:56] -rw-------. 1 boinc boinc      7778 Jan  8 19:25 heartbeat.json
[2026-01-08 19:26:56] -rw-------. 1 boinc boinc        95 Jan  8 19:26 pilot_heartbeat.json
[2026-01-08 19:26:56] -rw-r--r--. 1 boinc boinc        28 Jan  8 19:26 wrapper_checkpoint.txt
[2026-01-08 19:26:56] -rw-r--r--. 1 boinc boinc      8192 Jan  8 19:26 boinc_mmap_file
[2026-01-08 19:26:56] -rw-------. 1 boinc boinc      4884 Jan  8 19:26 pilotlog.txt
[2026-01-08 19:26:56] -rw-------. 1 boinc boinc   3027037 Jan  8 19:26 log.47898826._016779.job.log.1
[2026-01-08 19:26:56] -rw-------. 1 boinc boinc       357 Jan  8 19:26 output.list
[2026-01-08 19:26:56] -rw-r--r--. 1 boinc boinc       620 Jan  8 19:26 runtime_log
[2026-01-08 19:26:56] -rw-------. 1 boinc boinc   3614720 Jan  8 19:26 result.tar.gz
[2026-01-08 19:26:56] -rw-r--r--. 1 boinc boinc      8817 Jan  8 19:26 runtime_log.err
[2026-01-08 19:26:56] -rw-------. 1 boinc boinc       657 Jan  8 19:26 PtmKDmCypx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZAeKDmN7aFAn.diag
[2026-01-08 19:26:56] -rw-r--r--. 1 boinc boinc     20769 Jan  8 19:26 stderr.txt
[2026-01-08 19:26:56] HITS file was successfully produced:
[2026-01-08 19:26:56] -rw-------. 1 boinc boinc 227092032 Jan  8 19:22 shared/HITS.pool.root.1
[2026-01-08 19:26:56]  *** Contents of shared directory: ***
[2026-01-08 19:26:56] total 446196
[2026-01-08 19:26:56] -rw-r--r--. 2 boinc boinc 225580255 Jan  8 13:01 ATLAS.root_0
[2026-01-08 19:26:56] -rw-r--r--. 2 boinc boinc     15847 Jan  8 13:01 start_atlas.sh
[2026-01-08 19:26:56] -rw-r--r--. 2 boinc boinc    592401 Jan  8 13:01 input.tar.gz
[2026-01-08 19:26:56] -rw-------. 1 boinc boinc 227092032 Jan  8 19:22 HITS.pool.root.1
[2026-01-08 19:26:56] -rw-------. 1 boinc boinc   3614720 Jan  8 19:26 result.tar.gz
19:26:58 (26835): run_atlas exited; CPU time 83983.904775
19:26:58 (26835): called boinc_finish(0)

</stderr_txt>
]]>

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