Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:42:48 (9890): wrapper (7.7.26015): starting
12:42:48 (9890): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 12:42:48] Arguments: --nthreads 8
[2026-01-08 12:42:48] Threads: 8
[2026-01-08 12:42:48] Checking for CVMFS
[2026-01-08 12:42:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 12:42:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 12:42:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 12:42:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 12:42:52] 2.11.2.0 17366 33912 96436 154906 2 17 15682402 25165825 96 130560 0 15594900 99.815 10656806 3969 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 12:42:52] CVMFS is ok
[2026-01-08 12:42:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 12:42:52] Checking for apptainer binary...
[2026-01-08 12:42:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 12:42:52] Running /usr/bin/apptainer --version
[2026-01-08 12:42:52] apptainer version 1.3.2-1.el7
[2026-01-08 12:42:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 12:43:08] cg-vwn463.simple-grid.lan
[2026-01-08 12:43:08] apptainer works
[2026-01-08 12:43:08] Set ATHENA_PROC_NUMBER=8
[2026-01-08 12:43:08] Set ATHENA_CORE_NUMBER=8
[2026-01-08 12:43:08] Starting ATLAS job with PandaID=6962324208
[2026-01-08 12:43:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 18:34:07]  *** The last 200 lines of the pilot log: ***
[2026-01-08 18:34:07] 2026-01-08 17:33:16,140 | INFO     | time since job start (20755s) is within the limit (174528.0s)
[2026-01-08 18:34:07] 2026-01-08 17:33:17,095 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 18:34:07] 2026-01-08 17:33:17,096 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-08 18:34:07] 2026-01-08 17:33:17,098 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6962324208/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 18:34:07] 2026-01-08 17:33:17,099 | INFO     | extracted standard info from prmon json
[2026-01-08 18:34:07] 2026-01-08 17:33:17,099 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 18:34:07] 2026-01-08 17:33:17,099 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 18:34:07] 2026-01-08 17:33:17,099 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 18:34:07] 2026-01-08 17:33:17,099 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 18:34:07] 2026-01-08 17:33:17,106 | INFO     | fitting pss+swap vs Time
[2026-01-08 18:34:07] 2026-01-08 17:33:17,114 | INFO     | sum of square deviations: 11143362422.5
[2026-01-08 18:34:07] 2026-01-08 17:33:17,117 | INFO     | sum of deviations: 163962013643.00006
[2026-01-08 18:34:07] 2026-01-08 17:33:17,117 | INFO     | mean x: 1767883413.5
[2026-01-08 18:34:07] 2026-01-08 17:33:17,117 | INFO     | mean y: 2448894.806060606
[2026-01-08 18:34:07] 2026-01-08 17:33:17,118 | INFO     | intersect: -26009962204.579998
[2026-01-08 18:34:07] 2026-01-08 17:33:17,118 | INFO     | chi2: 9.027158434727122
[2026-01-08 18:34:07] 2026-01-08 17:33:17,119 | INFO     | sum of square deviations: 10644478650.0
[2026-01-08 18:34:07] 2026-01-08 17:33:17,122 | INFO     | sum of deviations: 182960240688.0
[2026-01-08 18:34:07] 2026-01-08 17:33:17,122 | INFO     | mean x: 1767883261.0
[2026-01-08 18:34:07] 2026-01-08 17:33:17,122 | INFO     | mean y: 2454620.196923077
[2026-01-08 18:34:07] 2026-01-08 17:33:17,122 | INFO     | intersect: -30384411432.735256
[2026-01-08 18:34:07] 2026-01-08 17:33:17,123 | INFO     | chi2: 8.320087771210666
[2026-01-08 18:34:07] 2026-01-08 17:33:17,123 | INFO     | current chi2=8.320087771210666 (change=7.832704705795159 %)
[2026-01-08 18:34:07] 2026-01-08 17:33:17,123 | INFO     | right removable region: 324
[2026-01-08 18:34:07] 2026-01-08 17:33:17,124 | INFO     | sum of square deviations: 10644478650.0
[2026-01-08 18:34:07] 2026-01-08 17:33:17,127 | INFO     | sum of deviations: 47603787254.999985
[2026-01-08 18:34:07] 2026-01-08 17:33:17,127 | INFO     | mean x: 1767883566.0
[2026-01-08 18:34:07] 2026-01-08 17:33:17,127 | INFO     | mean y: 2484447.6923076925
[2026-01-08 18:34:07] 2026-01-08 17:33:17,127 | INFO     | intersect: -7903769670.960532
[2026-01-08 18:34:07] 2026-01-08 17:33:17,128 | INFO     | chi2: 4.013236960411318
[2026-01-08 18:34:07] 2026-01-08 17:33:17,128 | INFO     | current chi2=4.013236960411318 (change=55.542632940034 %)
[2026-01-08 18:34:07] 2026-01-08 17:33:17,129 | INFO     | sum of square deviations: 10160711440.0
[2026-01-08 18:34:07] 2026-01-08 17:33:17,146 | INFO     | sum of deviations: -42047495871.0
[2026-01-08 18:34:07] 2026-01-08 17:33:17,146 | INFO     | mean x: 1767883718.5
[2026-01-08 18:34:07] 2026-01-08 17:33:17,146 | INFO     | mean y: 2512681.15625
[2026-01-08 18:34:07] 2026-01-08 17:33:17,147 | INFO     | intersect: 7318445605.045768
[2026-01-08 18:34:07] 2026-01-08 17:33:17,147 | INFO     | chi2: 1.1937308553134982
[2026-01-08 18:34:07] 2026-01-08 17:33:17,147 | INFO     | current chi2=1.1937308553134982 (change=70.2551614298112 %)
[2026-01-08 18:34:07] 2026-01-08 17:33:17,148 | INFO     | sum of square deviations: 9691828230.0
[2026-01-08 18:34:07] 2026-01-08 17:33:17,151 | INFO     | sum of deviations: -60421074376.0
[2026-01-08 18:34:07] 2026-01-08 17:33:17,151 | INFO     | mean x: 1767883871.0
[2026-01-08 18:34:07] 2026-01-08 17:33:17,151 | INFO     | mean y: 2518617.073015873
[2026-01-08 18:34:07] 2026-01-08 17:33:17,151 | INFO     | intersect: 11023911105.972067
[2026-01-08 18:34:07] 2026-01-08 17:33:17,152 | INFO     | chi2: 0.9850410712906048
[2026-01-08 18:34:07] 2026-01-08 17:33:17,152 | INFO     | current chi2=0.9850410712906048 (change=17.48214709320613 %)
[2026-01-08 18:34:07] 2026-01-08 17:33:17,152 | INFO     | left removable region: 30
[2026-01-08 18:34:07] 2026-01-08 17:33:17,153 | INFO     | sum of square deviations: 7879803557.5
[2026-01-08 18:34:07] 2026-01-08 17:33:17,155 | INFO     | sum of deviations: -19348666128.000004
[2026-01-08 18:34:07] 2026-01-08 17:33:17,156 | INFO     | mean x: 1767884145.5
[2026-01-08 18:34:07] 2026-01-08 17:33:17,156 | INFO     | mean y: 2518598.6394557822
[2026-01-08 18:34:07] 2026-01-08 17:33:17,156 | INFO     | intersect: 4343515151.999801
[2026-01-08 18:34:07] 2026-01-08 17:33:17,156 | INFO     | chi2: 0.13779618868157367
[2026-01-08 18:34:07] 2026-01-08 17:33:17,157 | INFO     | current memory leak: -2.46 B/s (using 294 data points, chi2=0.14)
[2026-01-08 18:34:07] 2026-01-08 17:33:17,157 | INFO     | could have reported an average CPU frequency of 2250 MHz (14 samples)
[2026-01-08 18:34:07] 2026-01-08 17:33:17,157 | INFO     | ..............................
[2026-01-08 18:34:07] 2026-01-08 17:33:17,158 | INFO     | . Timing measurements:
[2026-01-08 18:34:07] 2026-01-08 17:33:17,158 | INFO     | . get job = 0 s
[2026-01-08 18:34:07] 2026-01-08 17:33:17,158 | INFO     | . initial setup = 10 s
[2026-01-08 18:34:07] 2026-01-08 17:33:17,158 | INFO     | . payload setup = 152 s
[2026-01-08 18:34:07] 2026-01-08 17:33:17,158 | INFO     | . stage-in = 0 s
[2026-01-08 18:34:07] 2026-01-08 17:33:17,158 | INFO     | . payload execution = 20264 s
[2026-01-08 18:34:07] 2026-01-08 17:33:17,158 | INFO     | . stage-out = 4 s
[2026-01-08 18:34:07] 2026-01-08 17:33:17,158 | INFO     | . log creation = 1 s
[2026-01-08 18:34:07] 2026-01-08 17:33:17,158 | INFO     | ..............................
[2026-01-08 18:34:07] 2026-01-08 17:33:17,326 | INFO     | 
[2026-01-08 18:34:07] 2026-01-08 17:33:17,327 | INFO     | job summary report
[2026-01-08 18:34:07] 2026-01-08 17:33:17,327 | INFO     | --------------------------------------------------
[2026-01-08 18:34:07] 2026-01-08 17:33:17,327 | INFO     | PanDA job id: 6962324208
[2026-01-08 18:34:07] 2026-01-08 17:33:17,327 | INFO     | task id: 47898826
[2026-01-08 18:34:07] 2026-01-08 17:33:17,327 | INFO     | errors: (none)
[2026-01-08 18:34:07] 2026-01-08 17:33:17,327 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 18:34:07] 2026-01-08 17:33:17,327 | INFO     | pilot state: finished 
[2026-01-08 18:34:07] 2026-01-08 17:33:17,327 | INFO     | transexitcode: 0
[2026-01-08 18:34:07] 2026-01-08 17:33:17,327 | INFO     | exeerrorcode: 0
[2026-01-08 18:34:07] 2026-01-08 17:33:17,328 | INFO     | exeerrordiag: 
[2026-01-08 18:34:07] 2026-01-08 17:33:17,328 | INFO     | exitcode: 0
[2026-01-08 18:34:07] 2026-01-08 17:33:17,328 | INFO     | exitmsg: OK
[2026-01-08 18:34:07] 2026-01-08 17:33:17,328 | INFO     | cpuconsumptiontime: 75237 s
[2026-01-08 18:34:07] 2026-01-08 17:33:17,328 | INFO     | nevents: 400
[2026-01-08 18:34:07] 2026-01-08 17:33:17,328 | INFO     | neventsw: 0
[2026-01-08 18:34:07] 2026-01-08 17:33:17,328 | INFO     | pid: 20440
[2026-01-08 18:34:07] 2026-01-08 17:33:17,328 | INFO     | pgrp: 20440
[2026-01-08 18:34:07] 2026-01-08 17:33:17,328 | INFO     | corecount: 8
[2026-01-08 18:34:07] 2026-01-08 17:33:17,328 | INFO     | event service: False
[2026-01-08 18:34:07] 2026-01-08 17:33:17,328 | INFO     | sizes: {0: 2283141, 1: 2283827, 2: 2284026, 13: 2284026, 24: 2284082, 34: 2284110, 45: 2284266, 56: 2284294, 66: 2284322, 77: 2284350, 88: 2284406, 99: 2284714, 10
[2026-01-08 18:34:07] 2026-01-08 17:33:17,328 | INFO     | --------------------------------------------------
[2026-01-08 18:34:07] 2026-01-08 17:33:17,329 | INFO     | 
[2026-01-08 18:34:07] 2026-01-08 17:33:17,329 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-01-08 18:34:07] 2026-01-08 17:33:17,888 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 18:34:07] 2026-01-08 17:33:17,889 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 18:34:07] 2026-01-08 17:33:17,889 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 18:34:07] 2026-01-08 17:33:17,889 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 18:34:07] 2026-01-08 17:33:17,889 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 18:34:07] 2026-01-08 17:33:17,889 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 18:34:07] 2026-01-08 17:33:17,889 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 18:34:07] 2026-01-08 17:33:17,889 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 18:34:07] 2026-01-08 17:33:17,889 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 18:34:07] 2026-01-08 17:33:17,890 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 18:34:07] 2026-01-08 17:33:17,890 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 18:34:07] 2026-01-08 17:33:17,890 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 18:34:07] 2026-01-08 17:33:17,890 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 18:34:07] 2026-01-08 17:33:17,890 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 18:34:07] 2026-01-08 17:33:17,890 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 18:34:07] 2026-01-08 17:33:17,890 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 18:34:07] 2026-01-08 17:33:17,890 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 18:34:07] 2026-01-08 17:33:17,890 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 18:34:07] 2026-01-08 17:33:17,891 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 18:34:07] 2026-01-08 17:33:17,891 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 18:34:07] 2026-01-08 17:33:17,891 | INFO     | job 6962324208 has completed (purged errors)
[2026-01-08 18:34:07] 2026-01-08 17:33:17,891 | INFO     | overall cleanup function is called
[2026-01-08 18:34:07] 2026-01-08 17:33:18,900 | INFO     | --- collectZombieJob: --- 10, [20440]
[2026-01-08 18:34:07] 2026-01-08 17:33:18,900 | INFO     | zombie collector waiting for pid 20440
[2026-01-08 18:34:07] 2026-01-08 17:33:18,900 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 18:34:07] 2026-01-08 17:33:18,900 | INFO     | collected zombie processes
[2026-01-08 18:34:07] 2026-01-08 17:33:18,900 | INFO     | will attempt to kill all subprocesses of pid=20440
[2026-01-08 18:34:07] 2026-01-08 17:33:18,976 | INFO     | process IDs to be killed: [20440] (in reverse order)
[2026-01-08 18:34:07] 2026-01-08 17:33:19,975 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 18:34:07] 2026-01-08 17:33:19,976 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 18:34:07] 2026-01-08 17:33:19,978 | INFO     | did not find any defunct processes belonging to 20440
[2026-01-08 18:34:07] 2026-01-08 17:33:19,979 | INFO     | did not find any defunct processes belonging to 20440
[2026-01-08 18:34:07] 2026-01-08 17:33:19,980 | INFO     | ready for new job
[2026-01-08 18:34:07] 2026-01-08 17:33:19,980 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 18:34:07] 2026-01-08 17:33:19,982 | INFO     | ***************************************
[2026-01-08 18:34:07] 2026-01-08 17:33:19,982 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 18:34:07] 2026-01-08 17:33:19,982 | INFO     | ***************************************
[2026-01-08 18:34:07] 2026-01-08 17:33:19,982 | INFO     | 
[2026-01-08 18:34:07] 2026-01-08 17:33:19,983 | INFO     | pilot is running in a VM
[2026-01-08 18:34:07] 2026-01-08 17:33:19,983 | INFO     | architecture information:
[2026-01-08 18:34:07] 2026-01-08 17:33:20,001 | INFO     | executing command: cat /etc/os-release
[2026-01-08 18:34:07] 2026-01-08 17:33:20,351 | INFO     | cat /etc/os-release:
[2026-01-08 18:34:07] NAME="CentOS Linux"
[2026-01-08 18:34:07] VERSION="7 (Core)"
[2026-01-08 18:34:07] ID="centos"
[2026-01-08 18:34:07] ID_LIKE="rhel fedora"
[2026-01-08 18:34:07] VERSION_ID="7"
[2026-01-08 18:34:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 18:34:07] ANSI_COLOR="0;31"
[2026-01-08 18:34:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 18:34:07] HOME_URL="https://www.centos.org/"
[2026-01-08 18:34:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 18:34:07] 
[2026-01-08 18:34:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 18:34:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 18:34:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 18:34:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 18:34:07] 
[2026-01-08 18:34:07] 2026-01-08 17:33:20,352 | INFO     | ***************************************
[2026-01-08 18:34:07] 2026-01-08 17:33:20,855 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-01-08 18:34:07] 2026-01-08 17:33:21,093 | INFO     | sufficient remaining disk space (496089694208 B)
[2026-01-08 18:34:07] 2026-01-08 17:33:21,094 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 18:34:07] 2026-01-08 17:33:21,094 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 18:34:07] 2026-01-08 17:33:21,094 | INFO     | update_server=False
[2026-01-08 18:34:07] 2026-01-08 17:33:21,094 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 18:34:07] 2026-01-08 17:33:21,396 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 18:34:07] 2026-01-08 17:33:21,396 | INFO     | aborting loop
[2026-01-08 18:34:07] 2026-01-08 17:33:21,469 | INFO     | all data control threads have been joined
[2026-01-08 18:34:07] 2026-01-08 17:33:21,565 | INFO     | all job control threads have been joined
[2026-01-08 18:34:07] 2026-01-08 17:33:21,651 | INFO     | all payload control threads have been joined
[2026-01-08 18:34:07] 2026-01-08 17:33:22,100 | INFO     | [job] retrieve thread has finished
[2026-01-08 18:34:07] 2026-01-08 17:33:22,162 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 18:34:07] 2026-01-08 17:33:22,286 | INFO     | [payload] failed_post thread has finished
[2026-01-08 18:34:07] 2026-01-08 17:33:22,324 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 18:34:07] 2026-01-08 17:33:22,336 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 18:34:07] 2026-01-08 17:33:22,351 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 18:34:07] 2026-01-08 17:33:22,355 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 18:34:07] 2026-01-08 17:33:22,402 | INFO     | [job] job monitor thread has finished
[2026-01-08 18:34:07] 2026-01-08 17:33:22,475 | INFO     | [data] control thread has finished
[2026-01-08 18:34:07] 2026-01-08 17:33:22,571 | INFO     | [job] control thread has finished
[2026-01-08 18:34:07] 2026-01-08 17:33:22,657 | INFO     | [payload] control thread has finished
[2026-01-08 18:34:07] 2026-01-08 17:33:22,710 | INFO     | [payload] validate_post thread has finished
[2026-01-08 18:34:07] 2026-01-08 17:33:22,820 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 18:34:07] 2026-01-08 17:33:22,823 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 18:34:07] 2026-01-08 17:33:23,170 | INFO     | [job] validate thread has finished
[2026-01-08 18:34:07] 2026-01-08 17:33:23,190 | INFO     | [data] copytool_in thread has finished
[2026-01-08 18:34:07] 2026-01-08 17:33:23,361 | INFO     | [job] queue monitor thread has finished
[2026-01-08 18:34:07] 2026-01-08 17:33:24,169 | INFO     | [data] copytool_out thread has finished
[2026-01-08 18:34:07] 2026-01-08 17:33:26,345 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 18:34:07] 2026-01-08 17:33:49,298 | INFO     | PID=13833 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 18:34:07] 2026-01-08 17:33:49,299 | INFO     | .. there are 2 such processes running
[2026-01-08 18:34:07] 2026-01-08 17:33:49,299 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 18:34:07] 2026-01-08 17:33:49,299 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 18:34:07] 2026-01-08 17:33:49,299 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 18:34:07] 2026-01-08 17:33:56,638 | INFO     | [monitor] cgroup control has ended
[2026-01-08 18:34:07] 2026-01-08 17:33:56,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140405945886528)>', '<ExcThread(monitor, started 140405291083520)>']
[2026-01-08 18:34:07] 2026-01-08 17:33:57,347 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 18:34:07] 2026-01-08 17:33:57,347 | INFO     | [monitor] control thread has ended
[2026-01-08 18:34:07] 2026-01-08 17:34:02,023 | INFO     | all workflow threads have been joined
[2026-01-08 18:34:07] 2026-01-08 17:34:02,023 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 18:34:07] 2026-01-08 17:34:02,023 | INFO     | traces error code: 0
[2026-01-08 18:34:07] 2026-01-08 17:34:02,024 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 18:34:07] 2026-01-08 17:34:02,372 [wrapper] ==== pilot stdout END ====
[2026-01-08 18:34:07] 2026-01-08 17:34:02,496 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 18:34:07] 2026-01-08 17:34:02,602 [wrapper] pilotpid: 13833
[2026-01-08 18:34:07] 2026-01-08 17:34:02,711 [wrapper] Pilot exit status: 0
[2026-01-08 18:34:07] 2026-01-08 17:34:03,172 [wrapper] pandaids: 6962324208
[2026-01-08 18:34:07] 2026-01-08 17:34:04,108 [wrapper] cleanup supervisor_pilot 20903 13834
[2026-01-08 18:34:07] 2026-01-08 17:34:04,214 [wrapper] Test setup, not cleaning
[2026-01-08 18:34:07] 2026-01-08 17:34:04,333 [wrapper] apfmon messages muted
[2026-01-08 18:34:07] 2026-01-08 17:34:04,443 [wrapper] ==== wrapper stdout END ====
[2026-01-08 18:34:07] 2026-01-08 17:34:04,587 [wrapper] ==== wrapper stderr END ====
[2026-01-08 18:34:07]  *** Error codes and diagnostics ***
[2026-01-08 18:34:07]     "exeErrorCode": 0,
[2026-01-08 18:34:07]     "exeErrorDiag": "",
[2026-01-08 18:34:07]     "pilotErrorCode": 0,
[2026-01-08 18:34:07]     "pilotErrorDiag": "",
[2026-01-08 18:34:07]  *** Listing of results directory ***
[2026-01-08 18:34:07] total 447036
[2026-01-08 18:34:07] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 18:34:07] -rwx------. 1 boinc boinc     36322 Jan  7 22:10 runpilot2-wrapper.sh
[2026-01-08 18:34:07] -rw-r--r--. 1 boinc boinc      5112 Jan  7 22:16 queuedata.json
[2026-01-08 18:34:07] -rw-r--r--. 1 boinc boinc       100 Jan  8 12:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 18:34:07] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 12:42 run_atlas
[2026-01-08 18:34:07] -rw-r--r--. 1 boinc boinc       105 Jan  8 12:42 job.xml
[2026-01-08 18:34:07] -rw-r--r--. 1 boinc boinc      6390 Jan  8 12:42 init_data.xml
[2026-01-08 18:34:07] -rw-r--r--. 2 boinc boinc 225127738 Jan  8 12:42 EVNT.47898824._000773.pool.root.1
[2026-01-08 18:34:07] -rw-r--r--. 2 boinc boinc     15847 Jan  8 12:42 start_atlas.sh
[2026-01-08 18:34:07] drwxrwx--x. 2 boinc boinc        68 Jan  8 12:42 shared
[2026-01-08 18:34:07] -rw-r--r--. 2 boinc boinc    592407 Jan  8 12:42 input.tar.gz
[2026-01-08 18:34:07] -rw-r--r--. 1 boinc boinc         0 Jan  8 12:42 boinc_lockfile
[2026-01-08 18:34:07] -rw-r--r--. 1 boinc boinc      2519 Jan  8 12:43 pandaJob.out
[2026-01-08 18:34:07] -rw-------. 1 boinc boinc    989835 Jan  8 12:47 agis_schedconf.cvmfs.json
[2026-01-08 18:34:07] drwx------. 5 boinc boinc      4096 Jan  8 12:47 pilot3
[2026-01-08 18:34:07] -rw-------. 1 boinc boinc 222163318 Jan  8 18:29 HITS.47898826._016720.pool.root.1
[2026-01-08 18:34:07] -rw-r--r--. 1 boinc boinc       531 Jan  8 18:30 boinc_task_state.xml
[2026-01-08 18:34:07] -rw-------. 1 boinc boinc      1016 Jan  8 18:31 memory_monitor_summary.json
[2026-01-08 18:34:07] -rw-------. 1 boinc boinc   1516240 Jan  8 18:31 agis_ddmendpoints.agis.ALL.json
[2026-01-08 18:34:07] -rw-------. 1 boinc boinc    528018 Jan  8 18:31 log.47898826._016720.job.log.tgz.1
[2026-01-08 18:34:07] -rw-------. 1 boinc boinc        95 Jan  8 18:32 pilot_heartbeat.json
[2026-01-08 18:34:07] -rw-------. 1 boinc boinc      7782 Jan  8 18:33 heartbeat.json
[2026-01-08 18:34:07] -rw-r--r--. 1 boinc boinc      8192 Jan  8 18:33 boinc_mmap_file
[2026-01-08 18:34:07] -rw-r--r--. 1 boinc boinc        28 Jan  8 18:33 wrapper_checkpoint.txt
[2026-01-08 18:34:07] -rw-------. 1 boinc boinc      4885 Jan  8 18:34 pilotlog.txt
[2026-01-08 18:34:07] -rw-------. 1 boinc boinc   2760573 Jan  8 18:34 log.47898826._016720.job.log.1
[2026-01-08 18:34:07] -rw-------. 1 boinc boinc       357 Jan  8 18:34 output.list
[2026-01-08 18:34:07] -rw-r--r--. 1 boinc boinc       620 Jan  8 18:34 runtime_log
[2026-01-08 18:34:07] -rw-------. 1 boinc boinc   3307520 Jan  8 18:34 result.tar.gz
[2026-01-08 18:34:07] -rw-r--r--. 1 boinc boinc      8833 Jan  8 18:34 runtime_log.err
[2026-01-08 18:34:07] -rw-------. 1 boinc boinc       657 Jan  8 18:34 E7NNDmBypx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmn9dKDmalbien.diag
[2026-01-08 18:34:07] -rw-r--r--. 1 boinc boinc     20765 Jan  8 18:34 stderr.txt
[2026-01-08 18:34:07] HITS file was successfully produced:
[2026-01-08 18:34:07] -rw-------. 1 boinc boinc 222163318 Jan  8 18:29 shared/HITS.pool.root.1
[2026-01-08 18:34:07]  *** Contents of shared directory: ***
[2026-01-08 18:34:07] total 440640
[2026-01-08 18:34:07] -rw-r--r--. 2 boinc boinc 225127738 Jan  8 12:42 ATLAS.root_0
[2026-01-08 18:34:07] -rw-r--r--. 2 boinc boinc     15847 Jan  8 12:42 start_atlas.sh
[2026-01-08 18:34:07] -rw-r--r--. 2 boinc boinc    592407 Jan  8 12:42 input.tar.gz
[2026-01-08 18:34:07] -rw-------. 1 boinc boinc 222163318 Jan  8 18:29 HITS.pool.root.1
[2026-01-08 18:34:07] -rw-------. 1 boinc boinc   3307520 Jan  8 18:34 result.tar.gz
18:34:09 (9890): run_atlas exited; CPU time 75431.990947
18:34:09 (9890): called boinc_finish(0)

</stderr_txt>
]]>

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