Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:41 (1175481): wrapper (7.7.26015): starting
00:03:41 (1175481): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 00:03:41] Arguments: --nthreads 12
[2026-01-08 00:03:41] Threads: 12
[2026-01-08 00:03:41] Checking for CVMFS
[2026-01-08 00:03:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 00:03:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 00:03:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 00:03:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 00:03:42] 2.13.3.0 11772 91480 245132 154891 3 522 25068816 32935937 23084 16776704 0 486293364 99.492 650876937 36775 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 00:03:42] CVMFS is ok
[2026-01-08 00:03:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 00:03:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 00:03:42] Further information can be found at the LHC@home message board.
[2026-01-08 00:03:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 00:03:42] Checking for apptainer binary...
[2026-01-08 00:03:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 00:03:42] Running /usr/bin/apptainer --version
[2026-01-08 00:03:42] apptainer version 1.4.5-2.el9
[2026-01-08 00:03:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 00:03:42] c7-3-28.aglt2.org
[2026-01-08 00:03:42] apptainer works
[2026-01-08 00:03:42] Set ATHENA_PROC_NUMBER=12
[2026-01-08 00:03:42] Set ATHENA_CORE_NUMBER=12
[2026-01-08 00:03:42] Starting ATLAS job with PandaID=6962316327
[2026-01-08 00:03:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 08:02:09]  *** The last 200 lines of the pilot log: ***
[2026-01-08 08:02:09] 2026-01-08 13:01:11,540 | INFO     | mean y: 2652939.9166666665
[2026-01-08 08:02:09] 2026-01-08 13:01:11,540 | INFO     | intersect: -12356056275.95746
[2026-01-08 08:02:09] 2026-01-08 13:01:11,540 | INFO     | chi2: 3.123029086629742
[2026-01-08 08:02:09] 2026-01-08 13:01:11,541 | INFO     | sum of square deviations: 30777154160.457966
[2026-01-08 08:02:09] 2026-01-08 13:01:11,549 | INFO     | sum of deviations: 218103130630.68054
[2026-01-08 08:02:09] 2026-01-08 13:01:11,550 | INFO     | mean x: 1767862790.3930886
[2026-01-08 08:02:09] 2026-01-08 13:01:11,550 | INFO     | mean y: 2652320.6501079914
[2026-01-08 08:02:09] 2026-01-08 13:01:11,561 | INFO     | intersect: -12525354885.604397
[2026-01-08 08:02:09] 2026-01-08 13:01:11,562 | INFO     | chi2: 3.1234191821269897
[2026-01-08 08:02:09] 2026-01-08 13:01:11,562 | INFO     | current chi2=3.1234191821269897 (change=-0.012490933847457515 %)
[2026-01-08 08:02:09] 2026-01-08 13:01:11,562 | INFO     | right removable region: 462
[2026-01-08 08:02:09] 2026-01-08 13:01:11,562 | INFO     | sum of square deviations: 30777127321.080093
[2026-01-08 08:02:09] 2026-01-08 13:01:11,571 | INFO     | sum of deviations: 94820744631.2289
[2026-01-08 08:02:09] 2026-01-08 13:01:11,571 | INFO     | mean x: 1767863095.399568
[2026-01-08 08:02:09] 2026-01-08 13:01:11,571 | INFO     | mean y: 2672179.1447084234
[2026-01-08 08:02:09] 2026-01-08 13:01:11,571 | INFO     | intersect: -5443908112.871105
[2026-01-08 08:02:09] 2026-01-08 13:01:11,571 | INFO     | chi2: 0.6093302700736075
[2026-01-08 08:02:09] 2026-01-08 13:01:11,571 | INFO     | current chi2=0.6093302700736075 (change=80.48912600006636 %)
[2026-01-08 08:02:09] 2026-01-08 13:01:11,580 | INFO     | sum of square deviations: 29790717517.772846
[2026-01-08 08:02:09] 2026-01-08 13:01:11,595 | INFO     | sum of deviations: 56911314327.628815
[2026-01-08 08:02:09] 2026-01-08 13:01:11,595 | INFO     | mean x: 1767863247.9039302
[2026-01-08 08:02:09] 2026-01-08 13:01:11,595 | INFO     | mean y: 2678036.150655022
[2026-01-08 08:02:09] 2026-01-08 13:01:11,595 | INFO     | intersect: -3374596140.9382176
[2026-01-08 08:02:09] 2026-01-08 13:01:11,596 | INFO     | chi2: 0.4154894969266061
[2026-01-08 08:02:09] 2026-01-08 13:01:11,596 | INFO     | current chi2=0.4154894969266061 (change=31.812103003447596 %)
[2026-01-08 08:02:09] 2026-01-08 13:01:11,596 | INFO     | sum of square deviations: 28825610439.44801
[2026-01-08 08:02:09] 2026-01-08 13:01:11,608 | INFO     | sum of deviations: 14588399754.580568
[2026-01-08 08:02:09] 2026-01-08 13:01:11,608 | INFO     | mean x: 1767863400.4083886
[2026-01-08 08:02:09] 2026-01-08 13:01:11,608 | INFO     | mean y: 2684725.110375276
[2026-01-08 08:02:09] 2026-01-08 13:01:11,608 | INFO     | intersect: -892016119.1553732
[2026-01-08 08:02:09] 2026-01-08 13:01:11,609 | INFO     | chi2: 0.14721300938296492
[2026-01-08 08:02:09] 2026-01-08 13:01:11,609 | INFO     | current chi2=0.14721300938296492 (change=64.56877719607694 %)
[2026-01-08 08:02:09] 2026-01-08 13:01:11,609 | INFO     | sum of square deviations: 27881573523.604847
[2026-01-08 08:02:09] 2026-01-08 13:01:11,621 | INFO     | sum of deviations: -4443914786.234398
[2026-01-08 08:02:09] 2026-01-08 13:01:11,621 | INFO     | mean x: 1767863552.9129465
[2026-01-08 08:02:09] 2026-01-08 13:01:11,621 | INFO     | mean y: 2687787.609375
[2026-01-08 08:02:09] 2026-01-08 13:01:11,621 | INFO     | intersect: 284459366.1102636
[2026-01-08 08:02:09] 2026-01-08 13:01:11,622 | INFO     | chi2: 0.0672131288419651
[2026-01-08 08:02:09] 2026-01-08 13:01:11,622 | INFO     | current chi2=0.0672131288419651 (change=54.342942160013465 %)
[2026-01-08 08:02:09] 2026-01-08 13:01:11,622 | INFO     | sum of square deviations: 26958428619.40387
[2026-01-08 08:02:09] 2026-01-08 13:01:11,641 | INFO     | sum of deviations: -3660546561.729129
[2026-01-08 08:02:09] 2026-01-08 13:01:11,642 | INFO     | mean x: 1767863705.4130926
[2026-01-08 08:02:09] 2026-01-08 13:01:11,642 | INFO     | mean y: 2687657.539503386
[2026-01-08 08:02:09] 2026-01-08 13:01:11,642 | INFO     | intersect: 242736790.21772382
[2026-01-08 08:02:09] 2026-01-08 13:01:11,642 | INFO     | chi2: 0.06710732103392296
[2026-01-08 08:02:09] 2026-01-08 13:01:11,642 | INFO     | current chi2=0.06710732103392296 (change=0.15742133994524665 %)
[2026-01-08 08:02:09] 2026-01-08 13:01:11,642 | INFO     | left removable region: 50
[2026-01-08 08:02:09] 2026-01-08 13:01:11,643 | INFO     | sum of square deviations: 21685674559.194427
[2026-01-08 08:02:09] 2026-01-08 13:01:11,648 | INFO     | sum of deviations: 17871689847.257286
[2026-01-08 08:02:09] 2026-01-08 13:01:11,648 | INFO     | mean x: 1767864284.9174757
[2026-01-08 08:02:09] 2026-01-08 13:01:11,648 | INFO     | mean y: 2683102.4781553396
[2026-01-08 08:02:09] 2026-01-08 13:01:11,648 | INFO     | intersect: -1454256690.0030837
[2026-01-08 08:02:09] 2026-01-08 13:01:11,648 | INFO     | chi2: 0.0456716860370224
[2026-01-08 08:02:09] 2026-01-08 13:01:11,649 | INFO     | current memory leak: 0.82 B/s (using 412 data points, chi2=0.05)
[2026-01-08 08:02:09] 2026-01-08 13:01:11,649 | INFO     | could have reported an average CPU frequency of 3043 MHz (19 samples)
[2026-01-08 08:02:09] 2026-01-08 13:01:11,649 | INFO     | ..............................
[2026-01-08 08:02:09] 2026-01-08 13:01:11,649 | INFO     | . Timing measurements:
[2026-01-08 08:02:09] 2026-01-08 13:01:11,650 | INFO     | . get job = 0 s
[2026-01-08 08:02:09] 2026-01-08 13:01:11,650 | INFO     | . initial setup = 5 s
[2026-01-08 08:02:09] 2026-01-08 13:01:11,650 | INFO     | . payload setup = 11 s
[2026-01-08 08:02:09] 2026-01-08 13:01:11,662 | INFO     | . stage-in = 0 s
[2026-01-08 08:02:09] 2026-01-08 13:01:11,662 | INFO     | . payload execution = 28555 s
[2026-01-08 08:02:09] 2026-01-08 13:01:11,662 | INFO     | . stage-out = 3 s
[2026-01-08 08:02:09] 2026-01-08 13:01:11,662 | INFO     | . log creation = 0 s
[2026-01-08 08:02:09] 2026-01-08 13:01:11,662 | INFO     | ..............................
[2026-01-08 08:02:09] 2026-01-08 13:01:11,813 | INFO     | 
[2026-01-08 08:02:09] 2026-01-08 13:01:11,814 | INFO     | job summary report
[2026-01-08 08:02:09] 2026-01-08 13:01:11,814 | INFO     | --------------------------------------------------
[2026-01-08 08:02:09] 2026-01-08 13:01:11,814 | INFO     | PanDA job id: 6962316327
[2026-01-08 08:02:09] 2026-01-08 13:01:11,814 | INFO     | task id: 47898826
[2026-01-08 08:02:09] 2026-01-08 13:01:11,814 | INFO     | errors: (none)
[2026-01-08 08:02:09] 2026-01-08 13:01:11,814 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 08:02:09] 2026-01-08 13:01:11,814 | INFO     | pilot state: finished 
[2026-01-08 08:02:09] 2026-01-08 13:01:11,814 | INFO     | transexitcode: 0
[2026-01-08 08:02:09] 2026-01-08 13:01:11,814 | INFO     | exeerrorcode: 0
[2026-01-08 08:02:09] 2026-01-08 13:01:11,814 | INFO     | exeerrordiag: 
[2026-01-08 08:02:09] 2026-01-08 13:01:11,814 | INFO     | exitcode: 0
[2026-01-08 08:02:09] 2026-01-08 13:01:11,814 | INFO     | exitmsg: OK
[2026-01-08 08:02:09] 2026-01-08 13:01:11,814 | INFO     | cpuconsumptiontime: 52093 s
[2026-01-08 08:02:09] 2026-01-08 13:01:11,814 | INFO     | nevents: 400
[2026-01-08 08:02:09] 2026-01-08 13:01:11,815 | INFO     | neventsw: 0
[2026-01-08 08:02:09] 2026-01-08 13:01:11,815 | INFO     | pid: 1187434
[2026-01-08 08:02:09] 2026-01-08 13:01:11,815 | INFO     | pgrp: 1187434
[2026-01-08 08:02:09] 2026-01-08 13:01:11,819 | INFO     | corecount: 12
[2026-01-08 08:02:09] 2026-01-08 13:01:11,819 | INFO     | event service: False
[2026-01-08 08:02:09] 2026-01-08 13:01:11,819 | INFO     | sizes: {0: 2283797, 1: 2283996, 10: 2284258, 11: 2284286, 28571: 2321142, 28572: 2321141, 28576: 2330323, 28579: 2330407, 28601: 2330601}
[2026-01-08 08:02:09] 2026-01-08 13:01:11,819 | INFO     | --------------------------------------------------
[2026-01-08 08:02:09] 2026-01-08 13:01:11,819 | INFO     | 
[2026-01-08 08:02:09] 2026-01-08 13:01:11,819 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-08 08:02:09] 2026-01-08 13:01:11,905 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 08:02:09] 2026-01-08 13:01:11,905 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 08:02:09] 2026-01-08 13:01:11,906 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 08:02:09] 2026-01-08 13:01:11,906 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 08:02:09] 2026-01-08 13:01:11,906 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 08:02:09] 2026-01-08 13:01:11,906 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 08:02:09] 2026-01-08 13:01:11,906 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 08:02:09] 2026-01-08 13:01:11,906 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 08:02:09] 2026-01-08 13:01:11,906 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 08:02:09] 2026-01-08 13:01:11,906 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 08:02:09] 2026-01-08 13:01:11,906 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 08:02:09] 2026-01-08 13:01:11,906 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 08:02:09] 2026-01-08 13:01:11,906 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 08:02:09] 2026-01-08 13:01:11,907 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 08:02:09] 2026-01-08 13:01:11,907 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 08:02:09] 2026-01-08 13:01:11,907 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 08:02:09] 2026-01-08 13:01:11,907 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 08:02:09] 2026-01-08 13:01:11,907 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 08:02:09] 2026-01-08 13:01:11,907 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 08:02:09] 2026-01-08 13:01:11,907 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 08:02:09] 2026-01-08 13:01:11,908 | INFO     | job 6962316327 has completed (purged errors)
[2026-01-08 08:02:09] 2026-01-08 13:01:11,908 | INFO     | overall cleanup function is called
[2026-01-08 08:02:09] 2026-01-08 13:01:12,943 | INFO     | --- collectZombieJob: --- 10, [1187434]
[2026-01-08 08:02:09] 2026-01-08 13:01:12,943 | INFO     | zombie collector waiting for pid 1187434
[2026-01-08 08:02:09] 2026-01-08 13:01:12,943 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 08:02:09] 2026-01-08 13:01:12,943 | INFO     | collected zombie processes
[2026-01-08 08:02:09] 2026-01-08 13:01:12,943 | INFO     | will attempt to kill all subprocesses of pid=1187434
[2026-01-08 08:02:09] 2026-01-08 13:01:15,853 | INFO     | process IDs to be killed: [1187434] (in reverse order)
[2026-01-08 08:02:09] 2026-01-08 13:01:15,985 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 08:02:09] 2026-01-08 13:01:15,985 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 08:02:09] 2026-01-08 13:01:16,004 | INFO     | did not find any defunct processes belonging to 1187434
[2026-01-08 08:02:09] 2026-01-08 13:01:16,020 | INFO     | did not find any defunct processes belonging to 1187434
[2026-01-08 08:02:09] 2026-01-08 13:01:16,021 | INFO     | ready for new job
[2026-01-08 08:02:09] 2026-01-08 13:01:16,021 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 08:02:09] 2026-01-08 13:01:16,029 | INFO     | ***************************************
[2026-01-08 08:02:09] 2026-01-08 13:01:16,030 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 08:02:09] 2026-01-08 13:01:16,030 | INFO     | ***************************************
[2026-01-08 08:02:09] 2026-01-08 13:01:16,030 | INFO     | 
[2026-01-08 08:02:09] 2026-01-08 13:01:16,083 | INFO     | architecture information:
[2026-01-08 08:02:09] 2026-01-08 13:01:16,091 | INFO     | executing command: cat /etc/os-release
[2026-01-08 08:02:09] 2026-01-08 13:01:16,191 | INFO     | cat /etc/os-release:
[2026-01-08 08:02:09] NAME="CentOS Linux"
[2026-01-08 08:02:09] VERSION="7 (Core)"
[2026-01-08 08:02:09] ID="centos"
[2026-01-08 08:02:09] ID_LIKE="rhel fedora"
[2026-01-08 08:02:09] VERSION_ID="7"
[2026-01-08 08:02:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 08:02:09] ANSI_COLOR="0;31"
[2026-01-08 08:02:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 08:02:09] HOME_URL="https://www.centos.org/"
[2026-01-08 08:02:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 08:02:09] 
[2026-01-08 08:02:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 08:02:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 08:02:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 08:02:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 08:02:09] 
[2026-01-08 08:02:09] 2026-01-08 13:01:16,191 | INFO     | ***************************************
[2026-01-08 08:02:09] 2026-01-08 13:01:16,712 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-08 08:02:09] 2026-01-08 13:01:16,855 | INFO     | sufficient remaining disk space (73987522560 B)
[2026-01-08 08:02:09] 2026-01-08 13:01:16,855 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 08:02:09] 2026-01-08 13:01:16,856 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 08:02:09] 2026-01-08 13:01:16,856 | INFO     | update_server=False
[2026-01-08 08:02:09] 2026-01-08 13:01:16,856 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 08:02:09] 2026-01-08 13:01:16,875 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 08:02:09] 2026-01-08 13:01:17,135 | INFO     | all job control threads have been joined
[2026-01-08 08:02:09] 2026-01-08 13:01:17,357 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 08:02:09] 2026-01-08 13:01:17,357 | INFO     | aborting loop
[2026-01-08 08:02:09] 2026-01-08 13:01:17,862 | INFO     | [job] retrieve thread has finished
[2026-01-08 08:02:09] 2026-01-08 13:01:17,881 | INFO     | [job] queue monitor thread has finished
[2026-01-08 08:02:09] 2026-01-08 13:01:17,885 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 08:02:09] 2026-01-08 13:01:17,916 | INFO     | all data control threads have been joined
[2026-01-08 08:02:09] 2026-01-08 13:01:17,925 | INFO     | all payload control threads have been joined
[2026-01-08 08:02:09] 2026-01-08 13:01:17,927 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 08:02:09] 2026-01-08 13:01:18,102 | INFO     | [payload] failed_post thread has finished
[2026-01-08 08:02:09] 2026-01-08 13:01:18,141 | INFO     | [job] control thread has finished
[2026-01-08 08:02:09] 2026-01-08 13:01:18,285 | INFO     | [data] copytool_in thread has finished
[2026-01-08 08:02:09] 2026-01-08 13:01:18,363 | INFO     | [job] job monitor thread has finished
[2026-01-08 08:02:09] 2026-01-08 13:01:18,412 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 08:02:09] 2026-01-08 13:01:18,412 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 08:02:09] 2026-01-08 13:01:18,418 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 08:02:09] 2026-01-08 13:01:18,418 | INFO     | [job] validate thread has finished
[2026-01-08 08:02:09] 2026-01-08 13:01:18,928 | INFO     | [data] control thread has finished
[2026-01-08 08:02:09] 2026-01-08 13:01:18,931 | INFO     | [payload] control thread has finished
[2026-01-08 08:02:09] 2026-01-08 13:01:19,038 | INFO     | [payload] validate_post thread has finished
[2026-01-08 08:02:09] 2026-01-08 13:01:19,169 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 08:02:09] 2026-01-08 13:01:19,892 | INFO     | [data] copytool_out thread has finished
[2026-01-08 08:02:09] 2026-01-08 13:01:23,206 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 08:02:09] 2026-01-08 13:01:48,315 | INFO     | PID=1181040 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 08:02:09] 2026-01-08 13:01:48,315 | INFO     | .. there are 17 such processes running
[2026-01-08 08:02:09] 2026-01-08 13:01:48,316 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 08:02:09] 2026-01-08 13:01:48,316 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 08:02:09] 2026-01-08 13:01:48,317 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 08:02:09] 2026-01-08 13:02:02,540 | INFO     | [monitor] cgroup control has ended
[2026-01-08 08:02:09] 2026-01-08 13:02:03,074 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140036246206272)>', '<ExcThread(monitor, started 140035512850176)>']
[2026-01-08 08:02:09] 2026-01-08 13:02:03,460 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 08:02:09] 2026-01-08 13:02:03,460 | INFO     | [monitor] control thread has ended
[2026-01-08 08:02:09] 2026-01-08 13:02:08,100 | INFO     | all workflow threads have been joined
[2026-01-08 08:02:09] 2026-01-08 13:02:08,100 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 08:02:09] 2026-01-08 13:02:08,100 | INFO     | traces error code: 0
[2026-01-08 08:02:09] 2026-01-08 13:02:08,100 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 08:02:09] 2026-01-08 13:02:08,496 [wrapper] ==== pilot stdout END ====
[2026-01-08 08:02:09] 2026-01-08 13:02:08,523 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 08:02:09] 2026-01-08 13:02:08,541 [wrapper] pilotpid: 1181040
[2026-01-08 08:02:09] 2026-01-08 13:02:08,556 [wrapper] Pilot exit status: 0
[2026-01-08 08:02:09] 2026-01-08 13:02:08,589 [wrapper] pandaids: 6962316327
[2026-01-08 08:02:09] 2026-01-08 13:02:08,817 [wrapper] cleanup supervisor_pilot 2476260 1181041
[2026-01-08 08:02:09] 2026-01-08 13:02:08,824 [wrapper] Test setup, not cleaning
[2026-01-08 08:02:09] 2026-01-08 13:02:08,831 [wrapper] apfmon messages muted
[2026-01-08 08:02:09] 2026-01-08 13:02:08,834 [wrapper] ==== wrapper stdout END ====
[2026-01-08 08:02:09] 2026-01-08 13:02:08,836 [wrapper] ==== wrapper stderr END ====
[2026-01-08 08:02:09]  *** Error codes and diagnostics ***
[2026-01-08 08:02:09]     "exeErrorCode": 0,
[2026-01-08 08:02:09]     "exeErrorDiag": "",
[2026-01-08 08:02:09]     "pilotErrorCode": 0,
[2026-01-08 08:02:09]     "pilotErrorDiag": "",
[2026-01-08 08:02:09]  *** Listing of results directory ***
[2026-01-08 08:02:09] total 453536
[2026-01-08 08:02:09] -rwx------. 1 boincer umatlas     36322 Jan  7 15:55 runpilot2-wrapper.sh
[2026-01-08 08:02:09] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 15:55 pilot3.tar.gz
[2026-01-08 08:02:09] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 15:56 queuedata.json
[2026-01-08 08:02:09] -rw-r--r--. 1 boincer umatlas       100 Jan  8 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 08:02:09] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 00:03 run_atlas
[2026-01-08 08:02:09] -rw-r--r--. 1 boincer umatlas       105 Jan  8 00:03 job.xml
[2026-01-08 08:02:09] -rw-r--r--. 2 boincer umatlas 225273074 Jan  8 00:03 EVNT.47898824._000475.pool.root.1
[2026-01-08 08:02:09] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 00:03 start_atlas.sh
[2026-01-08 08:02:09] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 00:03 shared
[2026-01-08 08:02:09] -rw-r--r--. 2 boincer umatlas    592393 Jan  8 00:03 input.tar.gz
[2026-01-08 08:02:09] -rw-r--r--. 1 boincer umatlas         0 Jan  8 00:03 boinc_lockfile
[2026-01-08 08:02:09] -rw-r--r--. 1 boincer umatlas      2518 Jan  8 00:03 pandaJob.out
[2026-01-08 08:02:09] -rw-------. 1 boincer umatlas        57 Jan  8 00:03 setup.sh.local
[2026-01-08 08:02:09] -rw-------. 1 boincer umatlas    989835 Jan  8 00:04 agis_schedconf.cvmfs.json
[2026-01-08 08:02:09] drwx------. 5 boincer umatlas      4096 Jan  8 00:04 pilot3
[2026-01-08 08:02:09] -rw-r--r--. 1 boincer umatlas      6945 Jan  8 07:57 init_data.xml
[2026-01-08 08:02:09] -rw-------. 1 boincer umatlas 227056332 Jan  8 07:59 HITS.47898826._012175.pool.root.1
[2026-01-08 08:02:09] -rw-r--r--. 1 boincer umatlas       531 Jan  8 08:00 boinc_task_state.xml
[2026-01-08 08:02:09] -rw-------. 1 boincer umatlas      1032 Jan  8 08:00 memory_monitor_summary.json
[2026-01-08 08:02:09] -rw-------. 1 boincer umatlas   1516240 Jan  8 08:00 agis_ddmendpoints.agis.ALL.json
[2026-01-08 08:02:09] -rw-------. 1 boincer umatlas    683941 Jan  8 08:00 log.47898826._012175.job.log.tgz.1
[2026-01-08 08:02:09] -rw-------. 1 boincer umatlas      7775 Jan  8 08:01 heartbeat.json
[2026-01-08 08:02:09] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 08:01 boinc_mmap_file
[2026-01-08 08:02:09] -rw-r--r--. 1 boincer umatlas        28 Jan  8 08:01 wrapper_checkpoint.txt
[2026-01-08 08:02:09] -rw-------. 1 boincer umatlas        95 Jan  8 08:01 pilot_heartbeat.json
[2026-01-08 08:02:09] -rw-------. 1 boincer umatlas      4824 Jan  8 08:02 pilotlog.txt
[2026-01-08 08:02:09] -rw-------. 1 boincer umatlas   3401128 Jan  8 08:02 log.47898826._012175.job.log.1
[2026-01-08 08:02:09] -rw-------. 1 boincer umatlas       357 Jan  8 08:02 output.list
[2026-01-08 08:02:09] -rw-r--r--. 1 boincer umatlas       620 Jan  8 08:02 runtime_log
[2026-01-08 08:02:09] -rw-------. 1 boincer umatlas   4106240 Jan  8 08:02 result.tar.gz
[2026-01-08 08:02:09] -rw-r--r--. 1 boincer umatlas      9340 Jan  8 08:02 runtime_log.err
[2026-01-08 08:02:09] -rw-------. 1 boincer umatlas       657 Jan  8 08:02 RJEMDmDkpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBeiKDmZw6FWm.diag
[2026-01-08 08:02:09] -rw-r--r--. 1 boincer umatlas     21034 Jan  8 08:02 stderr.txt
[2026-01-08 08:02:09] HITS file was successfully produced:
[2026-01-08 08:02:09] -rw-------. 1 boincer umatlas 227056332 Jan  8 07:59 shared/HITS.pool.root.1
[2026-01-08 08:02:09]  *** Contents of shared directory: ***
[2026-01-08 08:02:09] total 446348
[2026-01-08 08:02:09] -rw-r--r--. 2 boincer umatlas 225273074 Jan  8 00:03 ATLAS.root_0
[2026-01-08 08:02:09] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 00:03 start_atlas.sh
[2026-01-08 08:02:09] -rw-r--r--. 2 boincer umatlas    592393 Jan  8 00:03 input.tar.gz
[2026-01-08 08:02:09] -rw-------. 1 boincer umatlas 227056332 Jan  8 07:59 HITS.pool.root.1
[2026-01-08 08:02:09] -rw-------. 1 boincer umatlas   4106240 Jan  8 08:02 result.tar.gz
08:02:11 (1175481): run_atlas exited; CPU time 53064.167988
08:02:11 (1175481): called boinc_finish(0)

</stderr_txt>
]]>

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