Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:35:25 (19281): wrapper (7.7.26015): starting
12:35:25 (19281): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 12:35:25] Arguments: --nthreads 8
[2026-01-08 12:35:25] Threads: 8
[2026-01-08 12:35:25] Checking for CVMFS
[2026-01-08 12:35:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 12:35:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 12:35:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 12:35:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 12:35:28] 2.11.2.0 3018 33899 108536 154905 3 61 17077609 25165825 96 130560 0 15238869 99.822 9900743 3438 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 12:35:28] CVMFS is ok
[2026-01-08 12:35:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 12:35:28] Checking for apptainer binary...
[2026-01-08 12:35:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 12:35:28] Running /usr/bin/apptainer --version
[2026-01-08 12:35:28] apptainer version 1.3.2-1.el7
[2026-01-08 12:35:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 12:35:44] cg-vwn451.simple-grid.lan
[2026-01-08 12:35:44] apptainer works
[2026-01-08 12:35:44] Set ATHENA_PROC_NUMBER=8
[2026-01-08 12:35:44] Set ATHENA_CORE_NUMBER=8
[2026-01-08 12:35:44] Starting ATLAS job with PandaID=6962324161
[2026-01-08 12:35:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/26 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 18:42:45]  *** The last 200 lines of the pilot log: ***
[2026-01-08 18:42:45] 2026-01-08 17:41:56,826 | INFO     | time since job start (21718s) is within the limit (174528.0s)
[2026-01-08 18:42:45] 2026-01-08 17:41:56,967 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 18:42:45] 2026-01-08 17:41:56,968 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 18:42:45] 2026-01-08 17:41:56,970 | INFO     | using path: /var/lib/boinc/slots/26/PanDA_Pilot-6962324161/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 18:42:45] 2026-01-08 17:41:56,971 | INFO     | extracted standard info from prmon json
[2026-01-08 18:42:45] 2026-01-08 17:41:56,971 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 18:42:45] 2026-01-08 17:41:56,971 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 18:42:45] 2026-01-08 17:41:56,972 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 18:42:45] 2026-01-08 17:41:56,972 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 18:42:45] 2026-01-08 17:41:56,979 | INFO     | fitting pss+swap vs Time
[2026-01-08 18:42:45] 2026-01-08 17:41:56,980 | INFO     | sum of square deviations: 12844082682.5
[2026-01-08 18:42:45] 2026-01-08 17:41:56,989 | INFO     | sum of deviations: 86676632674.49998
[2026-01-08 18:42:45] 2026-01-08 17:41:56,989 | INFO     | mean x: 1767883462.5
[2026-01-08 18:42:45] 2026-01-08 17:41:56,990 | INFO     | mean y: 2456654.2803468206
[2026-01-08 18:42:45] 2026-01-08 17:41:56,996 | INFO     | intersect: -11927876502.108976
[2026-01-08 18:42:45] 2026-01-08 17:41:56,997 | INFO     | chi2: 8.700888334664933
[2026-01-08 18:42:45] 2026-01-08 17:41:56,997 | INFO     | sum of square deviations: 12295263090.0
[2026-01-08 18:42:45] 2026-01-08 17:41:57,001 | INFO     | sum of deviations: 132634838697.99995
[2026-01-08 18:42:45] 2026-01-08 17:41:57,002 | INFO     | mean x: 1767883310.0
[2026-01-08 18:42:45] 2026-01-08 17:41:57,002 | INFO     | mean y: 2469310.4897360704
[2026-01-08 18:42:45] 2026-01-08 17:41:57,002 | INFO     | intersect: -19068527051.470684
[2026-01-08 18:42:45] 2026-01-08 17:41:57,002 | INFO     | chi2: 7.139369582860816
[2026-01-08 18:42:45] 2026-01-08 17:41:57,003 | INFO     | current chi2=7.139369582860816 (change=17.946658912779284 %)
[2026-01-08 18:42:45] 2026-01-08 17:41:57,003 | INFO     | right removable region: 340
[2026-01-08 18:42:45] 2026-01-08 17:41:57,003 | INFO     | sum of square deviations: 12295263090.0
[2026-01-08 18:42:45] 2026-01-08 17:41:57,018 | INFO     | sum of deviations: -33822454426.0
[2026-01-08 18:42:45] 2026-01-08 17:41:57,019 | INFO     | mean x: 1767883615.0
[2026-01-08 18:42:45] 2026-01-08 17:41:57,019 | INFO     | mean y: 2490121.3695014664
[2026-01-08 18:42:45] 2026-01-08 17:41:57,019 | INFO     | intersect: 4865677070.776179
[2026-01-08 18:42:45] 2026-01-08 17:41:57,020 | INFO     | chi2: 3.9749703431320547
[2026-01-08 18:42:45] 2026-01-08 17:41:57,020 | INFO     | current chi2=3.9749703431320547 (change=54.31535045340713 %)
[2026-01-08 18:42:45] 2026-01-08 17:41:57,020 | INFO     | sum of square deviations: 11762304260.0
[2026-01-08 18:42:45] 2026-01-08 17:41:57,024 | INFO     | sum of deviations: -109153159629.5
[2026-01-08 18:42:45] 2026-01-08 17:41:57,024 | INFO     | mean x: 1767883767.5
[2026-01-08 18:42:45] 2026-01-08 17:41:57,025 | INFO     | mean y: 2511619.467261905
[2026-01-08 18:42:45] 2026-01-08 17:41:57,025 | INFO     | intersect: 16408319088.379766
[2026-01-08 18:42:45] 2026-01-08 17:41:57,025 | INFO     | chi2: 1.9996213259511717
[2026-01-08 18:42:45] 2026-01-08 17:41:57,025 | INFO     | current chi2=1.9996213259511717 (change=49.694685662092716 %)
[2026-01-08 18:42:45] 2026-01-08 17:41:57,026 | INFO     | sum of square deviations: 11244973630.0
[2026-01-08 18:42:45] 2026-01-08 17:41:57,030 | INFO     | sum of deviations: -117907024927.99998
[2026-01-08 18:42:45] 2026-01-08 17:41:57,030 | INFO     | mean x: 1767883920.0
[2026-01-08 18:42:45] 2026-01-08 17:41:57,030 | INFO     | mean y: 2514187.9728096677
[2026-01-08 18:42:45] 2026-01-08 17:41:57,030 | INFO     | intersect: 18539323635.808777
[2026-01-08 18:42:45] 2026-01-08 17:41:57,031 | INFO     | chi2: 1.9450646791007733
[2026-01-08 18:42:45] 2026-01-08 17:41:57,031 | INFO     | current chi2=1.9450646791007733 (change=2.728348919985994 %)
[2026-01-08 18:42:45] 2026-01-08 17:41:57,031 | INFO     | left removable region: 30
[2026-01-08 18:42:45] 2026-01-08 17:41:57,032 | INFO     | sum of square deviations: 9237596457.5
[2026-01-08 18:42:45] 2026-01-08 17:41:57,035 | INFO     | sum of deviations: -39923845378.50001
[2026-01-08 18:42:45] 2026-01-08 17:41:57,035 | INFO     | mean x: 1767884194.5
[2026-01-08 18:42:45] 2026-01-08 17:41:57,035 | INFO     | mean y: 2518288.3645161293
[2026-01-08 18:42:45] 2026-01-08 17:41:57,035 | INFO     | intersect: 7643113496.548521
[2026-01-08 18:42:45] 2026-01-08 17:41:57,036 | INFO     | chi2: 0.19735821158423641
[2026-01-08 18:42:45] 2026-01-08 17:41:57,036 | INFO     | current memory leak: -4.32 B/s (using 310 data points, chi2=0.20)
[2026-01-08 18:42:45] 2026-01-08 17:41:57,037 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-08 18:42:45] 2026-01-08 17:41:57,037 | INFO     | ..............................
[2026-01-08 18:42:45] 2026-01-08 17:41:57,037 | INFO     | . Timing measurements:
[2026-01-08 18:42:45] 2026-01-08 17:41:57,037 | INFO     | . get job = 0 s
[2026-01-08 18:42:45] 2026-01-08 17:41:57,037 | INFO     | . initial setup = 10 s
[2026-01-08 18:42:45] 2026-01-08 17:41:57,037 | INFO     | . payload setup = 153 s
[2026-01-08 18:42:45] 2026-01-08 17:41:57,037 | INFO     | . stage-in = 0 s
[2026-01-08 18:42:45] 2026-01-08 17:41:57,038 | INFO     | . payload execution = 21231 s
[2026-01-08 18:42:45] 2026-01-08 17:41:57,038 | INFO     | . stage-out = 3 s
[2026-01-08 18:42:45] 2026-01-08 17:41:57,038 | INFO     | . log creation = 1 s
[2026-01-08 18:42:45] 2026-01-08 17:41:57,038 | INFO     | ..............................
[2026-01-08 18:42:45] 2026-01-08 17:41:57,515 | INFO     | 
[2026-01-08 18:42:45] 2026-01-08 17:41:57,515 | INFO     | job summary report
[2026-01-08 18:42:45] 2026-01-08 17:41:57,515 | INFO     | --------------------------------------------------
[2026-01-08 18:42:45] 2026-01-08 17:41:57,515 | INFO     | PanDA job id: 6962324161
[2026-01-08 18:42:45] 2026-01-08 17:41:57,516 | INFO     | task id: 47898826
[2026-01-08 18:42:45] 2026-01-08 17:41:57,516 | INFO     | errors: (none)
[2026-01-08 18:42:45] 2026-01-08 17:41:57,516 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 18:42:45] 2026-01-08 17:41:57,516 | INFO     | pilot state: finished 
[2026-01-08 18:42:45] 2026-01-08 17:41:57,516 | INFO     | transexitcode: 0
[2026-01-08 18:42:45] 2026-01-08 17:41:57,516 | INFO     | exeerrorcode: 0
[2026-01-08 18:42:45] 2026-01-08 17:41:57,516 | INFO     | exeerrordiag: 
[2026-01-08 18:42:45] 2026-01-08 17:41:57,516 | INFO     | exitcode: 0
[2026-01-08 18:42:45] 2026-01-08 17:41:57,516 | INFO     | exitmsg: OK
[2026-01-08 18:42:45] 2026-01-08 17:41:57,517 | INFO     | cpuconsumptiontime: 79985 s
[2026-01-08 18:42:45] 2026-01-08 17:41:57,517 | INFO     | nevents: 400
[2026-01-08 18:42:45] 2026-01-08 17:41:57,517 | INFO     | neventsw: 0
[2026-01-08 18:42:45] 2026-01-08 17:41:57,517 | INFO     | pid: 29461
[2026-01-08 18:42:45] 2026-01-08 17:41:57,517 | INFO     | pgrp: 29461
[2026-01-08 18:42:45] 2026-01-08 17:41:57,517 | INFO     | corecount: 8
[2026-01-08 18:42:45] 2026-01-08 17:41:57,517 | INFO     | event service: False
[2026-01-08 18:42:45] 2026-01-08 17:41:57,517 | INFO     | sizes: {0: 2283799, 1: 2283998, 12: 2283998, 23: 2284026, 33: 2284054, 44: 2284110, 55: 2284266, 65: 2284294, 76: 2284322, 87: 2284378, 98: 2284406, 106: 2284976, 
[2026-01-08 18:42:45] 2026-01-08 17:41:57,517 | INFO     | --------------------------------------------------
[2026-01-08 18:42:45] 2026-01-08 17:41:57,518 | INFO     | 
[2026-01-08 18:42:45] 2026-01-08 17:41:57,518 | INFO     | executing command: ls -lF /var/lib/boinc/slots/26
[2026-01-08 18:42:45] 2026-01-08 17:41:58,021 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 18:42:45] 2026-01-08 17:41:58,022 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 18:42:45] 2026-01-08 17:41:58,022 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 18:42:45] 2026-01-08 17:41:58,022 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 18:42:45] 2026-01-08 17:41:58,022 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 18:42:45] 2026-01-08 17:41:58,022 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 18:42:45] 2026-01-08 17:41:58,022 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 18:42:45] 2026-01-08 17:41:58,022 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 18:42:45] 2026-01-08 17:41:58,022 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 18:42:45] 2026-01-08 17:41:58,023 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 18:42:45] 2026-01-08 17:41:58,023 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 18:42:45] 2026-01-08 17:41:58,023 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 18:42:45] 2026-01-08 17:41:58,023 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 18:42:45] 2026-01-08 17:41:58,023 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 18:42:45] 2026-01-08 17:41:58,023 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 18:42:45] 2026-01-08 17:41:58,023 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 18:42:45] 2026-01-08 17:41:58,023 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 18:42:45] 2026-01-08 17:41:58,023 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 18:42:45] 2026-01-08 17:41:58,024 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 18:42:45] 2026-01-08 17:41:58,024 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 18:42:45] 2026-01-08 17:41:58,024 | INFO     | job 6962324161 has completed (purged errors)
[2026-01-08 18:42:45] 2026-01-08 17:41:58,024 | INFO     | overall cleanup function is called
[2026-01-08 18:42:45] 2026-01-08 17:41:59,033 | INFO     | --- collectZombieJob: --- 10, [29461]
[2026-01-08 18:42:45] 2026-01-08 17:41:59,033 | INFO     | zombie collector waiting for pid 29461
[2026-01-08 18:42:45] 2026-01-08 17:41:59,033 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 18:42:45] 2026-01-08 17:41:59,034 | INFO     | collected zombie processes
[2026-01-08 18:42:45] 2026-01-08 17:41:59,034 | INFO     | will attempt to kill all subprocesses of pid=29461
[2026-01-08 18:42:45] 2026-01-08 17:41:59,125 | INFO     | process IDs to be killed: [29461] (in reverse order)
[2026-01-08 18:42:45] 2026-01-08 17:42:00,312 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 18:42:45] 2026-01-08 17:42:00,312 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 18:42:45] 2026-01-08 17:42:00,314 | INFO     | did not find any defunct processes belonging to 29461
[2026-01-08 18:42:45] 2026-01-08 17:42:00,316 | INFO     | did not find any defunct processes belonging to 29461
[2026-01-08 18:42:45] 2026-01-08 17:42:00,317 | INFO     | ready for new job
[2026-01-08 18:42:45] 2026-01-08 17:42:00,317 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 18:42:45] 2026-01-08 17:42:00,319 | INFO     | ***************************************
[2026-01-08 18:42:45] 2026-01-08 17:42:00,319 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 18:42:45] 2026-01-08 17:42:00,320 | INFO     | ***************************************
[2026-01-08 18:42:45] 2026-01-08 17:42:00,320 | INFO     | 
[2026-01-08 18:42:45] 2026-01-08 17:42:00,320 | INFO     | pilot is running in a VM
[2026-01-08 18:42:45] 2026-01-08 17:42:00,321 | INFO     | architecture information:
[2026-01-08 18:42:45] 2026-01-08 17:42:00,336 | INFO     | executing command: cat /etc/os-release
[2026-01-08 18:42:45] 2026-01-08 17:42:00,680 | INFO     | cat /etc/os-release:
[2026-01-08 18:42:45] NAME="CentOS Linux"
[2026-01-08 18:42:45] VERSION="7 (Core)"
[2026-01-08 18:42:45] ID="centos"
[2026-01-08 18:42:45] ID_LIKE="rhel fedora"
[2026-01-08 18:42:45] VERSION_ID="7"
[2026-01-08 18:42:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 18:42:45] ANSI_COLOR="0;31"
[2026-01-08 18:42:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 18:42:45] HOME_URL="https://www.centos.org/"
[2026-01-08 18:42:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 18:42:45] 
[2026-01-08 18:42:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 18:42:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 18:42:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 18:42:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 18:42:45] 
[2026-01-08 18:42:45] 2026-01-08 17:42:00,681 | INFO     | ***************************************
[2026-01-08 18:42:45] 2026-01-08 17:42:01,184 | INFO     | executing command: df -mP /var/lib/boinc/slots/26
[2026-01-08 18:42:45] 2026-01-08 17:42:01,464 | INFO     | sufficient remaining disk space (496146317312 B)
[2026-01-08 18:42:45] 2026-01-08 17:42:01,465 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 18:42:45] 2026-01-08 17:42:01,465 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 18:42:45] 2026-01-08 17:42:01,465 | INFO     | update_server=False
[2026-01-08 18:42:45] 2026-01-08 17:42:01,465 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 18:42:45] 2026-01-08 17:42:01,601 | INFO     | all payload control threads have been joined
[2026-01-08 18:42:45] 2026-01-08 17:42:02,000 | INFO     | all data control threads have been joined
[2026-01-08 18:42:45] 2026-01-08 17:42:02,017 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 18:42:45] 2026-01-08 17:42:02,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 18:42:45] 2026-01-08 17:42:02,427 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 18:42:45] 2026-01-08 17:42:02,427 | INFO     | aborting loop
[2026-01-08 18:42:45] 2026-01-08 17:42:02,471 | INFO     | [job] retrieve thread has finished
[2026-01-08 18:42:45] 2026-01-08 17:42:02,607 | INFO     | [payload] control thread has finished
[2026-01-08 18:42:45] 2026-01-08 17:42:02,729 | INFO     | [job] validate thread has finished
[2026-01-08 18:42:45] 2026-01-08 17:42:02,816 | INFO     | all job control threads have been joined
[2026-01-08 18:42:45] 2026-01-08 17:42:03,006 | INFO     | [data] control thread has finished
[2026-01-08 18:42:45] 2026-01-08 17:42:03,204 | INFO     | [job] queue monitor thread has finished
[2026-01-08 18:42:45] 2026-01-08 17:42:03,243 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 18:42:45] 2026-01-08 17:42:03,308 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 18:42:45] 2026-01-08 17:42:03,383 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 18:42:45] 2026-01-08 17:42:03,433 | INFO     | [job] job monitor thread has finished
[2026-01-08 18:42:45] 2026-01-08 17:42:03,529 | INFO     | [data] copytool_in thread has finished
[2026-01-08 18:42:45] 2026-01-08 17:42:03,656 | INFO     | [payload] failed_post thread has finished
[2026-01-08 18:42:45] 2026-01-08 17:42:03,750 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 18:42:45] 2026-01-08 17:42:03,768 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 18:42:45] 2026-01-08 17:42:03,822 | INFO     | [job] control thread has finished
[2026-01-08 18:42:45] 2026-01-08 17:42:04,024 | INFO     | [data] copytool_out thread has finished
[2026-01-08 18:42:45] 2026-01-08 17:42:04,053 | INFO     | [payload] validate_post thread has finished
[2026-01-08 18:42:45] 2026-01-08 17:42:07,777 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 18:42:45] 2026-01-08 17:42:29,986 | INFO     | PID=23000 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 18:42:45] 2026-01-08 17:42:29,987 | INFO     | .. there are 2 such processes running
[2026-01-08 18:42:45] 2026-01-08 17:42:29,988 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 18:42:45] 2026-01-08 17:42:29,988 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 18:42:45] 2026-01-08 17:42:29,988 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 18:42:45] 2026-01-08 17:42:35,231 | INFO     | [monitor] cgroup control has ended
[2026-01-08 18:42:45] 2026-01-08 17:42:35,651 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140231831611200)>', '<ExcThread(monitor, started 140231370053376)>']
[2026-01-08 18:42:45] 2026-01-08 17:42:36,024 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 18:42:45] 2026-01-08 17:42:36,024 | INFO     | [monitor] control thread has ended
[2026-01-08 18:42:45] 2026-01-08 17:42:40,677 | INFO     | all workflow threads have been joined
[2026-01-08 18:42:45] 2026-01-08 17:42:40,677 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 18:42:45] 2026-01-08 17:42:40,677 | INFO     | traces error code: 0
[2026-01-08 18:42:45] 2026-01-08 17:42:40,678 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 18:42:45] 2026-01-08 17:42:41,010 [wrapper] ==== pilot stdout END ====
[2026-01-08 18:42:45] 2026-01-08 17:42:41,118 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 18:42:45] 2026-01-08 17:42:41,209 [wrapper] pilotpid: 23000
[2026-01-08 18:42:45] 2026-01-08 17:42:41,312 [wrapper] Pilot exit status: 0
[2026-01-08 18:42:45] 2026-01-08 17:42:41,474 [wrapper] pandaids: 6962324161
[2026-01-08 18:42:45] 2026-01-08 17:42:42,368 [wrapper] cleanup supervisor_pilot 28777 23001
[2026-01-08 18:42:45] 2026-01-08 17:42:42,482 [wrapper] Test setup, not cleaning
[2026-01-08 18:42:45] 2026-01-08 17:42:42,611 [wrapper] apfmon messages muted
[2026-01-08 18:42:45] 2026-01-08 17:42:42,700 [wrapper] ==== wrapper stdout END ====
[2026-01-08 18:42:45] 2026-01-08 17:42:42,771 [wrapper] ==== wrapper stderr END ====
[2026-01-08 18:42:45]  *** Error codes and diagnostics ***
[2026-01-08 18:42:45]     "exeErrorCode": 0,
[2026-01-08 18:42:45]     "exeErrorDiag": "",
[2026-01-08 18:42:45]     "pilotErrorCode": 0,
[2026-01-08 18:42:45]     "pilotErrorDiag": "",
[2026-01-08 18:42:45]  *** Listing of results directory ***
[2026-01-08 18:42:45] total 446232
[2026-01-08 18:42:45] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 18:42:45] -rwx------. 1 boinc boinc     36322 Jan  7 22:09 runpilot2-wrapper.sh
[2026-01-08 18:42:45] -rw-r--r--. 1 boinc boinc      5112 Jan  7 22:16 queuedata.json
[2026-01-08 18:42:45] -rw-r--r--. 1 boinc boinc       100 Jan  8 12:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 18:42:45] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 12:35 run_atlas
[2026-01-08 18:42:45] -rw-r--r--. 1 boinc boinc       105 Jan  8 12:35 job.xml
[2026-01-08 18:42:45] -rw-r--r--. 1 boinc boinc      6391 Jan  8 12:35 init_data.xml
[2026-01-08 18:42:45] -rw-r--r--. 2 boinc boinc 224204311 Jan  8 12:35 EVNT.47898824._000771.pool.root.1
[2026-01-08 18:42:45] -rw-r--r--. 2 boinc boinc     15847 Jan  8 12:35 start_atlas.sh
[2026-01-08 18:42:45] drwxrwx--x. 2 boinc boinc        68 Jan  8 12:35 shared
[2026-01-08 18:42:45] -rw-r--r--. 2 boinc boinc    592404 Jan  8 12:35 input.tar.gz
[2026-01-08 18:42:45] -rw-r--r--. 1 boinc boinc         0 Jan  8 12:35 boinc_lockfile
[2026-01-08 18:42:45] -rw-r--r--. 1 boinc boinc      2519 Jan  8 12:35 pandaJob.out
[2026-01-08 18:42:45] -rw-------. 1 boinc boinc    989835 Jan  8 12:39 agis_schedconf.cvmfs.json
[2026-01-08 18:42:45] drwx------. 5 boinc boinc      4096 Jan  8 12:39 pilot3
[2026-01-08 18:42:45] -rw-------. 1 boinc boinc 221978102 Jan  8 18:38 HITS.47898826._016673.pool.root.1
[2026-01-08 18:42:45] -rw-r--r--. 1 boinc boinc       531 Jan  8 18:38 boinc_task_state.xml
[2026-01-08 18:42:45] -rw-------. 1 boinc boinc      1014 Jan  8 18:39 memory_monitor_summary.json
[2026-01-08 18:42:45] -rw-------. 1 boinc boinc   1516240 Jan  8 18:40 agis_ddmendpoints.agis.ALL.json
[2026-01-08 18:42:45] -rw-------. 1 boinc boinc    546031 Jan  8 18:40 log.47898826._016673.job.log.tgz.1
[2026-01-08 18:42:45] -rw-------. 1 boinc boinc      7779 Jan  8 18:41 heartbeat.json
[2026-01-08 18:42:45] -rw-r--r--. 1 boinc boinc      8192 Jan  8 18:42 boinc_mmap_file
[2026-01-08 18:42:45] -rw-r--r--. 1 boinc boinc        28 Jan  8 18:42 wrapper_checkpoint.txt
[2026-01-08 18:42:45] -rw-------. 1 boinc boinc        95 Jan  8 18:42 pilot_heartbeat.json
[2026-01-08 18:42:45] -rw-------. 1 boinc boinc      4885 Jan  8 18:42 pilotlog.txt
[2026-01-08 18:42:45] -rw-------. 1 boinc boinc   2882700 Jan  8 18:42 log.47898826._016673.job.log.1
[2026-01-08 18:42:45] -rw-------. 1 boinc boinc       357 Jan  8 18:42 output.list
[2026-01-08 18:42:45] -rw-r--r--. 1 boinc boinc       620 Jan  8 18:42 runtime_log
[2026-01-08 18:42:45] -rw-------. 1 boinc boinc   3450880 Jan  8 18:42 result.tar.gz
[2026-01-08 18:42:45] -rw-r--r--. 1 boinc boinc      8833 Jan  8 18:42 runtime_log.err
[2026-01-08 18:42:45] -rw-------. 1 boinc boinc       657 Jan  8 18:42 b29KDm1xpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGGjKDmSuoJpm.diag
[2026-01-08 18:42:45] -rw-r--r--. 1 boinc boinc     20787 Jan  8 18:42 stderr.txt
[2026-01-08 18:42:45] HITS file was successfully produced:
[2026-01-08 18:42:45] -rw-------. 1 boinc boinc 221978102 Jan  8 18:38 shared/HITS.pool.root.1
[2026-01-08 18:42:45]  *** Contents of shared directory: ***
[2026-01-08 18:42:45] total 439696
[2026-01-08 18:42:45] -rw-r--r--. 2 boinc boinc 224204311 Jan  8 12:35 ATLAS.root_0
[2026-01-08 18:42:45] -rw-r--r--. 2 boinc boinc     15847 Jan  8 12:35 start_atlas.sh
[2026-01-08 18:42:45] -rw-r--r--. 2 boinc boinc    592404 Jan  8 12:35 input.tar.gz
[2026-01-08 18:42:45] -rw-------. 1 boinc boinc 221978102 Jan  8 18:38 HITS.pool.root.1
[2026-01-08 18:42:45] -rw-------. 1 boinc boinc   3450880 Jan  8 18:42 result.tar.gz
18:42:47 (19281): run_atlas exited; CPU time 80208.078809
18:42:47 (19281): called boinc_finish(0)

</stderr_txt>
]]>

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