Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:02:59 (3404648): wrapper (7.7.26015): starting
23:02:59 (3404648): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 23:02:59] Arguments: --nthreads 8
[2026-01-07 23:02:59] Threads: 8
[2026-01-07 23:02:59] Checking for CVMFS
[2026-01-07 23:02:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 23:03:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 23:03:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 23:03:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 23:03:01] 2.13.3.0 9438 91442 135924 154889 3 646 30920787 40960000 26633 16776704 0 1202301445 99.738 851487131 47893 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-07 23:03:01] CVMFS is ok
[2026-01-07 23:03:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 23:03:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 23:03:01] Further information can be found at the LHC@home message board.
[2026-01-07 23:03:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 23:03:01] Checking for apptainer binary...
[2026-01-07 23:03:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 23:03:01] Running /usr/bin/apptainer --version
[2026-01-07 23:03:01] apptainer version 1.4.5-2.el9
[2026-01-07 23:03:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 23:03:01] c8-7-3.aglt2.org
[2026-01-07 23:03:01] apptainer works
[2026-01-07 23:03:01] Set ATHENA_PROC_NUMBER=8
[2026-01-07 23:03:01] Set ATHENA_CORE_NUMBER=8
[2026-01-07 23:03:01] Starting ATLAS job with PandaID=6962319317
[2026-01-07 23:03:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 01:29:34]  *** The last 200 lines of the pilot log: ***
[2026-01-08 01:29:34] 2026-01-08 06:28:48,666 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 01:29:34] 2026-01-08 06:28:50,136 | INFO     | time since job start (8678s) is within the limit (174528.0s)
[2026-01-08 01:29:34] 2026-01-08 06:28:51,171 | INFO     | monitor loop #562: job 0:6962319317 is in state 'finished'
[2026-01-08 01:29:34] 2026-01-08 06:28:51,171 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 01:29:34] 2026-01-08 06:28:52,143 | INFO     | time since job start (8680s) is within the limit (174528.0s)
[2026-01-08 01:29:34] 2026-01-08 06:28:53,677 | INFO     | monitor loop #563: job 0:6962319317 is in state 'finished'
[2026-01-08 01:29:34] 2026-01-08 06:28:53,677 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 01:29:34] 2026-01-08 06:28:54,150 | INFO     | time since job start (8682s) is within the limit (174528.0s)
[2026-01-08 01:29:34] 2026-01-08 06:28:54,501 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-08 01:29:34] 2026-01-08 06:28:54,510 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3793.757953124999
[2026-01-08 01:29:34] 2026-01-08 06:28:54,534 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6962319317/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 01:29:34] 2026-01-08 06:28:54,534 | INFO     | extracted standard info from prmon json
[2026-01-08 01:29:34] 2026-01-08 06:28:54,534 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 01:29:34] 2026-01-08 06:28:54,534 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 01:29:34] 2026-01-08 06:28:54,535 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 01:29:34] 2026-01-08 06:28:54,535 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 01:29:34] 2026-01-08 06:28:54,536 | INFO     | fitting pss+swap vs Time
[2026-01-08 01:29:34] 2026-01-08 06:28:54,536 | INFO     | sum of square deviations: 850829054.2857145
[2026-01-08 01:29:34] 2026-01-08 06:28:54,537 | INFO     | sum of deviations: 31873375372.714287
[2026-01-08 01:29:34] 2026-01-08 06:28:54,541 | INFO     | mean x: 1767849440.5714285
[2026-01-08 01:29:34] 2026-01-08 06:28:54,541 | INFO     | mean y: 2412445.4785714285
[2026-01-08 01:29:34] 2026-01-08 06:28:54,541 | INFO     | intersect: -66223968209.89368
[2026-01-08 01:29:34] 2026-01-08 06:28:54,541 | INFO     | chi2: 3.305194829018409
[2026-01-08 01:29:34] 2026-01-08 06:28:54,541 | INFO     | sum of square deviations: 762886269.2592596
[2026-01-08 01:29:34] 2026-01-08 06:28:54,541 | INFO     | sum of deviations: 39069137219.44445
[2026-01-08 01:29:34] 2026-01-08 06:28:54,541 | INFO     | mean x: 1767849288.074074
[2026-01-08 01:29:34] 2026-01-08 06:28:54,541 | INFO     | mean y: 2424490.1555555556
[2026-01-08 01:29:34] 2026-01-08 06:28:54,542 | INFO     | intersect: -90533149686.74835
[2026-01-08 01:29:34] 2026-01-08 06:28:54,542 | INFO     | chi2: 2.639986515239264
[2026-01-08 01:29:34] 2026-01-08 06:28:54,542 | INFO     | current chi2=2.639986515239264 (change=20.126145301295338 %)
[2026-01-08 01:29:34] 2026-01-08 06:28:54,542 | INFO     | right removable region: 134
[2026-01-08 01:29:34] 2026-01-08 06:28:54,542 | INFO     | sum of square deviations: 762880169.2592596
[2026-01-08 01:29:34] 2026-01-08 06:28:54,542 | INFO     | sum of deviations: -994320113.2592564
[2026-01-08 01:29:34] 2026-01-08 06:28:54,542 | INFO     | mean x: 1767849593.074074
[2026-01-08 01:29:34] 2026-01-08 06:28:54,542 | INFO     | mean y: 2468959.525925926
[2026-01-08 01:29:34] 2026-01-08 06:28:54,542 | INFO     | intersect: 2306642640.3250194
[2026-01-08 01:29:34] 2026-01-08 06:28:54,542 | INFO     | chi2: 0.7918169347249813
[2026-01-08 01:29:34] 2026-01-08 06:28:54,542 | INFO     | current chi2=0.7918169347249813 (change=76.04325990791476 %)
[2026-01-08 01:29:34] 2026-01-08 06:28:54,543 | INFO     | sum of square deviations: 681218583.8769256
[2026-01-08 01:29:34] 2026-01-08 06:28:54,543 | INFO     | sum of deviations: -6005633697.723077
[2026-01-08 01:29:34] 2026-01-08 06:28:54,543 | INFO     | mean x: 1767849745.5692308
[2026-01-08 01:29:34] 2026-01-08 06:28:54,543 | INFO     | mean y: 2478148.969230769
[2026-01-08 01:29:34] 2026-01-08 06:28:54,543 | INFO     | intersect: 15587869175.852757
[2026-01-08 01:29:34] 2026-01-08 06:28:54,543 | INFO     | chi2: 0.703800442492254
[2026-01-08 01:29:34] 2026-01-08 06:28:54,543 | INFO     | current chi2=0.703800442492254 (change=11.115762794754783 %)
[2026-01-08 01:29:34] 2026-01-08 06:28:54,543 | INFO     | left removable region: 20
[2026-01-08 01:29:34] 2026-01-08 06:28:54,543 | INFO     | sum of square deviations: 459370367.78947383
[2026-01-08 01:29:34] 2026-01-08 06:28:54,543 | INFO     | sum of deviations: 1168310177.894736
[2026-01-08 01:29:34] 2026-01-08 06:28:54,544 | INFO     | mean x: 1767849867.5789473
[2026-01-08 01:29:34] 2026-01-08 06:28:54,544 | INFO     | mean y: 2495626.789473684
[2026-01-08 01:29:34] 2026-01-08 06:28:54,544 | INFO     | intersect: -4493652009.422235
[2026-01-08 01:29:34] 2026-01-08 06:28:54,544 | INFO     | chi2: 0.00014678488390794763
[2026-01-08 01:29:34] 2026-01-08 06:28:54,544 | INFO     | current memory leak: 2.54 B/s (using 114 data points, chi2=0.00)
[2026-01-08 01:29:34] 2026-01-08 06:28:54,544 | INFO     | could have reported an average CPU frequency of 3793 MHz (8 samples)
[2026-01-08 01:29:34] 2026-01-08 06:28:54,544 | INFO     | ..............................
[2026-01-08 01:29:34] 2026-01-08 06:28:54,544 | INFO     | . Timing measurements:
[2026-01-08 01:29:34] 2026-01-08 06:28:54,544 | INFO     | . get job = 0 s
[2026-01-08 01:29:34] 2026-01-08 06:28:54,544 | INFO     | . initial setup = 8 s
[2026-01-08 01:29:34] 2026-01-08 06:28:54,544 | INFO     | . payload setup = 44 s
[2026-01-08 01:29:34] 2026-01-08 06:28:54,544 | INFO     | . stage-in = 0 s
[2026-01-08 01:29:34] 2026-01-08 06:28:54,544 | INFO     | . payload execution = 8536 s
[2026-01-08 01:29:34] 2026-01-08 06:28:54,544 | INFO     | . stage-out = 1 s
[2026-01-08 01:29:34] 2026-01-08 06:28:54,544 | INFO     | . log creation = 0 s
[2026-01-08 01:29:34] 2026-01-08 06:28:54,544 | INFO     | ..............................
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | 
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | job summary report
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | --------------------------------------------------
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | PanDA job id: 6962319317
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | task id: 47898826
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | errors: (none)
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | pilot state: finished 
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | transexitcode: 0
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | exeerrorcode: 0
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | exeerrordiag: 
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | exitcode: 0
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | exitmsg: OK
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | cpuconsumptiontime: 32083 s
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | nevents: 400
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | neventsw: 0
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | pid: 3440293
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | pgrp: 3440293
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | corecount: 8
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | event service: False
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | sizes: {0: 2283969, 1: 2283997, 12: 2283997, 22: 2284025, 30: 2284315, 33: 2284343, 8585: 2312394, 8587: 2321392, 8590: 2321448, 8617: 2321642}
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | --------------------------------------------------
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | 
[2026-01-08 01:29:34] 2026-01-08 06:28:54,644 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2026-01-08 01:29:34] 2026-01-08 06:28:54,682 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 01:29:34] 2026-01-08 06:28:54,682 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 01:29:34] 2026-01-08 06:28:54,682 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 01:29:34] 2026-01-08 06:28:54,682 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 01:29:34] 2026-01-08 06:28:54,682 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 01:29:34] 2026-01-08 06:28:54,682 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 01:29:34] 2026-01-08 06:28:54,682 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 01:29:34] 2026-01-08 06:28:54,682 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 01:29:34] 2026-01-08 06:28:54,682 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 01:29:34] 2026-01-08 06:28:54,682 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 01:29:34] 2026-01-08 06:28:54,682 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 01:29:34] 2026-01-08 06:28:54,682 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 01:29:34] 2026-01-08 06:28:54,682 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 01:29:34] 2026-01-08 06:28:54,682 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 01:29:34] 2026-01-08 06:28:54,683 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 01:29:34] 2026-01-08 06:28:54,683 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 01:29:34] 2026-01-08 06:28:54,683 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 01:29:34] 2026-01-08 06:28:54,683 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 01:29:34] 2026-01-08 06:28:54,683 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 01:29:34] 2026-01-08 06:28:54,683 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 01:29:34] 2026-01-08 06:28:54,683 | INFO     | job 6962319317 has completed (purged errors)
[2026-01-08 01:29:34] 2026-01-08 06:28:54,683 | INFO     | overall cleanup function is called
[2026-01-08 01:29:34] 2026-01-08 06:28:55,691 | INFO     | --- collectZombieJob: --- 10, [3440293]
[2026-01-08 01:29:34] 2026-01-08 06:28:55,691 | INFO     | zombie collector waiting for pid 3440293
[2026-01-08 01:29:34] 2026-01-08 06:28:55,691 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 01:29:34] 2026-01-08 06:28:55,691 | INFO     | collected zombie processes
[2026-01-08 01:29:34] 2026-01-08 06:28:55,691 | INFO     | will attempt to kill all subprocesses of pid=3440293
[2026-01-08 01:29:34] 2026-01-08 06:28:56,204 | INFO     | process IDs to be killed: [3440293] (in reverse order)
[2026-01-08 01:29:34] 2026-01-08 06:28:56,358 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 01:29:34] 2026-01-08 06:28:56,358 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 01:29:34] 2026-01-08 06:28:56,379 | INFO     | did not find any defunct processes belonging to 3440293
[2026-01-08 01:29:34] 2026-01-08 06:28:56,394 | INFO     | did not find any defunct processes belonging to 3440293
[2026-01-08 01:29:34] 2026-01-08 06:28:56,394 | INFO     | ready for new job
[2026-01-08 01:29:34] 2026-01-08 06:28:56,394 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 01:29:34] 2026-01-08 06:28:56,395 | INFO     | ***************************************
[2026-01-08 01:29:34] 2026-01-08 06:28:56,395 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 01:29:34] 2026-01-08 06:28:56,395 | INFO     | ***************************************
[2026-01-08 01:29:34] 2026-01-08 06:28:56,395 | INFO     | 
[2026-01-08 01:29:34] 2026-01-08 06:28:56,401 | INFO     | architecture information:
[2026-01-08 01:29:34] 2026-01-08 06:28:56,404 | INFO     | executing command: cat /etc/os-release
[2026-01-08 01:29:34] 2026-01-08 06:28:56,430 | INFO     | cat /etc/os-release:
[2026-01-08 01:29:34] NAME="CentOS Linux"
[2026-01-08 01:29:34] VERSION="7 (Core)"
[2026-01-08 01:29:34] ID="centos"
[2026-01-08 01:29:34] ID_LIKE="rhel fedora"
[2026-01-08 01:29:34] VERSION_ID="7"
[2026-01-08 01:29:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 01:29:34] ANSI_COLOR="0;31"
[2026-01-08 01:29:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 01:29:34] HOME_URL="https://www.centos.org/"
[2026-01-08 01:29:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 01:29:34] 
[2026-01-08 01:29:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 01:29:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 01:29:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 01:29:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 01:29:34] 
[2026-01-08 01:29:34] 2026-01-08 06:28:56,430 | INFO     | ***************************************
[2026-01-08 01:29:34] 2026-01-08 06:28:56,934 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-01-08 01:29:34] 2026-01-08 06:28:56,948 | INFO     | sufficient remaining disk space (172188762112 B)
[2026-01-08 01:29:34] 2026-01-08 06:28:56,948 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 01:29:34] 2026-01-08 06:28:56,948 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 01:29:34] 2026-01-08 06:28:56,949 | INFO     | update_server=False
[2026-01-08 01:29:34] 2026-01-08 06:28:56,949 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 01:29:34] 2026-01-08 06:28:56,950 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 01:29:34] 2026-01-08 06:28:57,087 | INFO     | all job control threads have been joined
[2026-01-08 01:29:34] 2026-01-08 06:28:57,188 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 01:29:34] 2026-01-08 06:28:57,188 | INFO     | aborting loop
[2026-01-08 01:29:34] 2026-01-08 06:28:57,775 | INFO     | all data control threads have been joined
[2026-01-08 01:29:34] 2026-01-08 06:28:57,828 | INFO     | all payload control threads have been joined
[2026-01-08 01:29:34] 2026-01-08 06:28:57,954 | INFO     | [job] retrieve thread has finished
[2026-01-08 01:29:34] 2026-01-08 06:28:58,008 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 01:29:34] 2026-01-08 06:28:58,093 | INFO     | [job] control thread has finished
[2026-01-08 01:29:34] 2026-01-08 06:28:58,179 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 01:29:34] 2026-01-08 06:28:58,194 | INFO     | [job] job monitor thread has finished
[2026-01-08 01:29:34] 2026-01-08 06:28:58,322 | INFO     | [payload] failed_post thread has finished
[2026-01-08 01:29:34] 2026-01-08 06:28:58,781 | INFO     | [data] control thread has finished
[2026-01-08 01:29:34] 2026-01-08 06:28:58,836 | INFO     | [payload] control thread has finished
[2026-01-08 01:29:34] 2026-01-08 06:28:58,909 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 01:29:34] 2026-01-08 06:28:58,959 | INFO     | [payload] validate_post thread has finished
[2026-01-08 01:29:34] 2026-01-08 06:28:59,088 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 01:29:34] 2026-01-08 06:28:59,212 | INFO     | [data] copytool_in thread has finished
[2026-01-08 01:29:34] 2026-01-08 06:28:59,360 | INFO     | [job] validate thread has finished
[2026-01-08 01:29:34] 2026-01-08 06:28:59,658 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 01:29:34] 2026-01-08 06:29:00,015 | INFO     | [data] copytool_out thread has finished
[2026-01-08 01:29:34] 2026-01-08 06:29:00,664 | INFO     | [job] queue monitor thread has finished
[2026-01-08 01:29:34] 2026-01-08 06:29:00,959 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 01:29:34] 2026-01-08 06:29:07,153 | INFO     | job.realtimelogging is not enabled
[2026-01-08 01:29:34] 2026-01-08 06:29:08,159 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 01:29:34] 2026-01-08 06:29:26,920 | INFO     | [monitor] cgroup control has ended
[2026-01-08 01:29:34] 2026-01-08 06:29:27,923 | INFO     | PID=3416429 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 01:29:34] 2026-01-08 06:29:27,923 | INFO     | .. there are 23 such processes running
[2026-01-08 01:29:34] 2026-01-08 06:29:27,923 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 01:29:34] 2026-01-08 06:29:27,923 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 01:29:34] 2026-01-08 06:29:27,923 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 01:29:34] 2026-01-08 06:29:28,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139808326428480)>', '<ExcThread(monitor, started 139807695042304)>']
[2026-01-08 01:29:34] 2026-01-08 06:29:28,929 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 01:29:34] 2026-01-08 06:29:28,929 | INFO     | [monitor] control thread has ended
[2026-01-08 01:29:34] 2026-01-08 06:29:33,775 | INFO     | all workflow threads have been joined
[2026-01-08 01:29:34] 2026-01-08 06:29:33,775 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 01:29:34] 2026-01-08 06:29:33,775 | INFO     | traces error code: 0
[2026-01-08 01:29:34] 2026-01-08 06:29:33,775 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 01:29:34] 2026-01-08 06:29:34,101 [wrapper] ==== pilot stdout END ====
[2026-01-08 01:29:34] 2026-01-08 06:29:34,146 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 01:29:34] 2026-01-08 06:29:34,164 [wrapper] pilotpid: 3416429
[2026-01-08 01:29:34] 2026-01-08 06:29:34,179 [wrapper] Pilot exit status: 0
[2026-01-08 01:29:34] 2026-01-08 06:29:34,334 [wrapper] pandaids: 6962319317
[2026-01-08 01:29:34] 2026-01-08 06:29:34,482 [wrapper] cleanup supervisor_pilot   86857 3416430
[2026-01-08 01:29:34] 2026-01-08 06:29:34,521 [wrapper] Test setup, not cleaning
[2026-01-08 01:29:34] 2026-01-08 06:29:34,556 [wrapper] apfmon messages muted
[2026-01-08 01:29:34] 2026-01-08 06:29:34,583 [wrapper] ==== wrapper stdout END ====
[2026-01-08 01:29:34] 2026-01-08 06:29:34,602 [wrapper] ==== wrapper stderr END ====
[2026-01-08 01:29:34]  *** Error codes and diagnostics ***
[2026-01-08 01:29:34]     "exeErrorCode": 0,
[2026-01-08 01:29:34]     "exeErrorDiag": "",
[2026-01-08 01:29:34]     "pilotErrorCode": 0,
[2026-01-08 01:29:34]     "pilotErrorDiag": "",
[2026-01-08 01:29:34]  *** Listing of results directory ***
[2026-01-08 01:29:34] total 435196
[2026-01-08 01:29:34] -rwx------. 1 boincer umatlas     36322 Jan  7 15:59 runpilot2-wrapper.sh
[2026-01-08 01:29:34] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 16:00 pilot3.tar.gz
[2026-01-08 01:29:34] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 16:02 queuedata.json
[2026-01-08 01:29:34] -rw-r--r--. 1 boincer umatlas       100 Jan  7 23:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 01:29:34] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  7 23:02 run_atlas
[2026-01-08 01:29:34] -rw-r--r--. 1 boincer umatlas       105 Jan  7 23:02 job.xml
[2026-01-08 01:29:34] -rw-r--r--. 2 boincer umatlas 224266531 Jan  7 23:02 EVNT.47898824._000567.pool.root.1
[2026-01-08 01:29:34] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 23:02 start_atlas.sh
[2026-01-08 01:29:34] drwxrwx--x. 2 boincer umatlas      4096 Jan  7 23:02 shared
[2026-01-08 01:29:34] -rw-r--r--. 2 boincer umatlas    592403 Jan  7 23:02 input.tar.gz
[2026-01-08 01:29:34] -rw-r--r--. 1 boincer umatlas         0 Jan  7 23:02 boinc_lockfile
[2026-01-08 01:29:34] -rw-r--r--. 1 boincer umatlas      2519 Jan  7 23:03 pandaJob.out
[2026-01-08 01:29:34] -rw-------. 1 boincer umatlas        57 Jan  7 23:03 setup.sh.local
[2026-01-08 01:29:34] -rw-------. 1 boincer umatlas    989835 Jan  7 23:04 agis_schedconf.cvmfs.json
[2026-01-08 01:29:34] -rw-------. 1 boincer umatlas   1516240 Jan  7 23:04 agis_ddmendpoints.agis.ALL.json
[2026-01-08 01:29:34] drwx------. 5 boincer umatlas      4096 Jan  7 23:04 pilot3
[2026-01-08 01:29:34] -rw-r--r--. 1 boincer umatlas      7170 Jan  8 01:27 init_data.xml
[2026-01-08 01:29:34] -rw-------. 1 boincer umatlas 214443273 Jan  8 01:27 HITS.47898826._013225.pool.root.1
[2026-01-08 01:29:34] -rw-r--r--. 1 boincer umatlas       529 Jan  8 01:27 boinc_task_state.xml
[2026-01-08 01:29:34] -rw-------. 1 boincer umatlas      1031 Jan  8 01:28 memory_monitor_summary.json
[2026-01-08 01:29:34] -rw-------. 1 boincer umatlas    374770 Jan  8 01:28 log.47898826._013225.job.log.tgz.1
[2026-01-08 01:29:34] -rw-------. 1 boincer umatlas        95 Jan  8 01:28 pilot_heartbeat.json
[2026-01-08 01:29:34] -rw-------. 1 boincer umatlas      7770 Jan  8 01:28 heartbeat.json
[2026-01-08 01:29:34] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 01:29 boinc_mmap_file
[2026-01-08 01:29:34] -rw-r--r--. 1 boincer umatlas        27 Jan  8 01:29 wrapper_checkpoint.txt
[2026-01-08 01:29:34] -rw-------. 1 boincer umatlas      4897 Jan  8 01:29 pilotlog.txt
[2026-01-08 01:29:34] -rw-------. 1 boincer umatlas   1132841 Jan  8 01:29 log.47898826._013225.job.log.1
[2026-01-08 01:29:34] -rw-------. 1 boincer umatlas       357 Jan  8 01:29 output.list
[2026-01-08 01:29:34] -rw-r--r--. 1 boincer umatlas       620 Jan  8 01:29 runtime_log
[2026-01-08 01:29:34] -rw-------. 1 boincer umatlas   1525760 Jan  8 01:29 result.tar.gz
[2026-01-08 01:29:34] -rw-r--r--. 1 boincer umatlas      9332 Jan  8 01:29 runtime_log.err
[2026-01-08 01:29:34] -rw-------. 1 boincer umatlas       650 Jan  8 01:29 JC1NDmrnpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7idKDmV1X6im.diag
[2026-01-08 01:29:34] -rw-r--r--. 1 boincer umatlas     21404 Jan  8 01:29 stderr.txt
[2026-01-08 01:29:34] HITS file was successfully produced:
[2026-01-08 01:29:35] -rw-------. 1 boincer umatlas 214443273 Jan  8 01:27 shared/HITS.pool.root.1
[2026-01-08 01:29:35]  *** Contents of shared directory: ***
[2026-01-08 01:29:35] total 430524
[2026-01-08 01:29:35] -rw-r--r--. 2 boincer umatlas 224266531 Jan  7 23:02 ATLAS.root_0
[2026-01-08 01:29:35] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 23:02 start_atlas.sh
[2026-01-08 01:29:35] -rw-r--r--. 2 boincer umatlas    592403 Jan  7 23:02 input.tar.gz
[2026-01-08 01:29:35] -rw-------. 1 boincer umatlas 214443273 Jan  8 01:27 HITS.pool.root.1
[2026-01-08 01:29:35] -rw-------. 1 boincer umatlas   1525760 Jan  8 01:29 result.tar.gz
01:29:36 (3404648): run_atlas exited; CPU time 32315.865362
01:29:36 (3404648): called boinc_finish(0)

</stderr_txt>
]]>

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