Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-08 04:49:01 (35416): vboxwrapper version 26210
2026-01-08 04:49:01 (35416): BOINC client version: 8.2.8
2026-01-08 04:49:02 (35416): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-08 04:49:02 (35416): Successfully copied 'init_data.xml' to the shared directory.
2026-01-08 04:49:03 (35416): Create VM. (boinc_d6676333d48e1d7d, slot#23)
2026-01-08 04:49:03 (35416): Setting Memory Size for VM. (4096MB)
2026-01-08 04:49:03 (35416): Setting CPU Count for VM. (1)
2026-01-08 04:49:04 (35416): Setting Chipset Options for VM.
2026-01-08 04:49:04 (35416): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-08 04:49:04 (35416): Setting Boot Options for VM.
2026-01-08 04:49:05 (35416): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-08 04:49:05 (35416): Enabling VM Network Access.
2026-01-08 04:49:05 (35416): Disabling USB Support for VM.
2026-01-08 04:49:05 (35416): Disabling COM Port Support for VM.
2026-01-08 04:49:06 (35416): Disabling LPT Port Support for VM.
2026-01-08 04:49:06 (35416): Disabling Audio Support for VM.
2026-01-08 04:49:06 (35416): Disabling Clipboard Support for VM.
2026-01-08 04:49:06 (35416): Disabling Drag and Drop Support for VM.
2026-01-08 04:49:07 (35416): Adding storage controller(s) to VM.
2026-01-08 04:49:07 (35416): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-08 04:49:08 (35416): Adding VirtualBox Guest Additions to VM.
2026-01-08 04:49:08 (35416): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-08 04:49:08 (35416): forwarding host port 57456 to guest port 80
2026-01-08 04:49:08 (35416): Enabling remote desktop for VM.
2026-01-08 04:49:09 (35416): Enabling shared directory for VM.
2026-01-08 04:49:10 (35416): Starting VM using VBoxManage interface. (boinc_d6676333d48e1d7d, slot#23)
2026-01-08 04:49:14 (35416): Successfully started VM. (PID = '48592')
2026-01-08 04:49:14 (35416): Reporting VM Process ID to BOINC.
2026-01-08 04:49:14 (35416): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-08 04:49:14 (35416): Guest Log: CPUID EDX: 0x178bfbff
2026-01-08 04:49:14 (35416): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-08 04:49:14 (35416): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-08 04:49:14 (35416): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-08 04:49:14 (35416): Detected: Web Application Enabled (http://localhost:57456)
2026-01-08 04:49:14 (35416): Detected: Remote Desktop Enabled (localhost:57459)
2026-01-08 04:49:14 (35416): Preference change detected
2026-01-08 04:49:14 (35416): Setting CPU throttle for VM. (100%)
2026-01-08 04:49:14 (35416): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-08 04:49:16 (35416): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-08 04:49:16 (35416): Guest Log: BIOS: Booting from Hard Disk...
2026-01-08 04:49:18 (35416): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-08 04:49:18 (35416): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-08 04:49:18 (35416): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-08 04:49:21 (35416): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-08 04:49:21 (35416): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-08 04:49:26 (35416): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-08 04:49:26 (35416): Guest Log: 00:00:00.000088 main     Log opened 2026-01-08T04:49:24.193432000Z
2026-01-08 04:49:26 (35416): Guest Log: 00:00:00.000152 main     OS Product: Linux
2026-01-08 04:49:26 (35416): Guest Log: 00:00:00.000162 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-08 04:49:26 (35416): Guest Log: 00:00:00.000171 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-08 04:49:26 (35416): Guest Log: 00:00:00.000180 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-08 04:49:26 (35416): Guest Log: 00:00:00.000181 main     Process ID: 1240
2026-01-08 04:49:26 (35416): Guest Log: 00:00:00.000181 main     Package type: LINUX_64BITS_GENERIC
2026-01-08 04:49:26 (35416): Guest Log: 00:00:00.000722 main     5.2.32 r132073 started. Verbose level = 0
2026-01-08 04:49:26 (35416): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-08 04:49:26 (35416): Guest Log: [INFO] Mounting shared directory
2026-01-08 04:49:26 (35416): Guest Log: [INFO] Checking for init_data.xml
2026-01-08 04:49:27 (35416): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-08 04:49:27 (35416): Guest Log: [INFO] Detected branch: prod
2026-01-08 04:49:27 (35416): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-08 04:49:27 (35416): Guest Log: Copying input files
2026-01-08 04:49:27 (35416): Guest Log: Copied input files into RunAtlas.
2026-01-08 04:49:27 (35416): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2026-01-08 04:49:34 (35416): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-08 04:49:34 (35416): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-08 04:49:34 (35416): Guest Log: 2.6.3.0 1510 0 31552 154889 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2026-01-08 04:49:35 (35416): Guest Log: copied the webapp to /var/www
2026-01-08 04:49:35 (35416): Guest Log: core_number=1
2026-01-08 04:49:35 (35416): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-08 04:49:35 (35416): Guest Log:  *** Starting ATLAS job. (PandaID=6962314004 taskID=47898826) ***
2026-01-08 04:49:36 (35416): Guest Log: 00:00:10.013132 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 921 724 000ns (GuestNow=1 767 844 175 283 364 000 ns GuestLast=1 767 847 764 205 088 000 ns fSetTimeLastLoop=true )
2026-01-08 06:29:16 (35416): Status Report: Elapsed Time: '6000.000000'
2026-01-08 06:29:16 (35416): Status Report: CPU Time: '5931.562500'
2026-01-08 08:09:19 (35416): Status Report: Elapsed Time: '12000.000000'
2026-01-08 08:09:19 (35416): Status Report: CPU Time: '11899.046875'
2026-01-08 09:49:22 (35416): Status Report: Elapsed Time: '18000.000000'
2026-01-08 09:49:22 (35416): Status Report: CPU Time: '17861.078125'
2026-01-08 11:29:24 (35416): Status Report: Elapsed Time: '24000.000000'
2026-01-08 11:29:24 (35416): Status Report: CPU Time: '23829.843750'
2026-01-08 13:09:27 (35416): Status Report: Elapsed Time: '30000.000000'
2026-01-08 13:09:27 (35416): Status Report: CPU Time: '29797.734375'
2026-01-08 13:45:38 (35416): Guest Log:  *** Job finished ***
2026-01-08 13:45:38 (35416): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-08 13:45:38 (35416): Guest Log: 2026-01-08 12:44:36,657 | INFO     | job.realtimelogging is not enabled
2026-01-08 13:45:38 (35416): Guest Log: 2026-01-08 12:44:37,659 | INFO     | [payload] run_realtimelog thread has finished
2026-01-08 13:45:38 (35416): Guest Log: 2026-01-08 12:45:18,420 | INFO     | [monitor] cgroup control has ended
2026-01-08 13:45:38 (35416): Guest Log: 2026-01-08 12:45:20,390 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139790359041856)>', '<ExcThread(monitor, started 139789701474048)>']
2026-01-08 13:45:38 (35416): Guest Log: 2026-01-08 12:45:20,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-08 13:45:38 (35416): Guest Log: 2026-01-08 12:45:20,494 | INFO     | [monitor] control thread has ended
2026-01-08 13:45:38 (35416): Guest Log: 2026-01-08 12:45:25,395 | INFO     | all workflow threads have been joined
2026-01-08 13:45:38 (35416): Guest Log: 2026-01-08 12:45:25,395 | INFO     | end of generic workflow (traces error code: 0)
2026-01-08 13:45:38 (35416): Guest Log: 2026-01-08 12:45:25,395 | INFO     | traces error code: 0
2026-01-08 13:45:38 (35416): Guest Log: 2026-01-08 12:45:25,395 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-08 13:45:38 (35416): Guest Log: 2026-01-08 12:45:25,478 [wrapper] ==== pilot stdout END ====
2026-01-08 13:45:38 (35416): Guest Log: 2026-01-08 12:45:25,480 [wrapper] ==== wrapper stdout RESUME ====
2026-01-08 13:45:38 (35416): Guest Log: 2026-01-08 12:45:25,482 [wrapper] pilotpid: 5837
2026-01-08 13:45:38 (35416): Guest Log: 2026-01-08 12:45:25,484 [wrapper] Pilot exit status: 0
2026-01-08 13:45:38 (35416): Guest Log: 2026-01-08 12:45:25,542 [wrapper] pandaids: 6962314004
2026-01-08 13:45:38 (35416): Guest Log: 2026-01-08 12:45:25,556 [wrapper] cleanup supervisor_pilot 12073 5838
2026-01-08 13:45:38 (35416): Guest Log: 2026-01-08 12:45:25,558 [wrapper] Test setup, not cleaning
2026-01-08 13:45:38 (35416): Guest Log: 2026-01-08 12:45:25,559 [wrapper] apfmon messages muted
2026-01-08 13:45:38 (35416): Guest Log: 2026-01-08 12:45:25,560 [wrapper] ==== wrapper stdout END ====
2026-01-08 13:45:38 (35416): Guest Log: 2026-01-08 12:45:25,561 [wrapper] ==== wrapper stderr END ====
2026-01-08 13:45:38 (35416): Guest Log:  *** Error codes and diagnostics ***
2026-01-08 13:45:38 (35416): Guest Log:     "exeErrorCode": 0,
2026-01-08 13:45:38 (35416): Guest Log:     "exeErrorDiag": "",
2026-01-08 13:45:38 (35416): Guest Log:     "pilotErrorCode": 0,
2026-01-08 13:45:38 (35416): Guest Log:     "pilotErrorDiag": "",
2026-01-08 13:45:38 (35416): Guest Log:  *** Listing of results directory ***
2026-01-08 13:45:38 (35416): Guest Log: total 229120
2026-01-08 13:45:38 (35416): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  7 20:49 pilot3.tar.gz
2026-01-08 13:45:38 (35416): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  7 20:53 runpilot2-wrapper.sh
2026-01-08 13:45:38 (35416): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  7 20:53 queuedata.json
2026-01-08 13:45:38 (35416): Guest Log: -rwxr-xr-x. 1 atlas atlas      9354 Jan  8 03:49 init_data.xml
2026-01-08 13:45:38 (35416): Guest Log: -rwxr-xr-x. 1 atlas atlas    592396 Jan  8 03:49 input.tar.gz
2026-01-08 13:45:38 (35416): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan  8 03:49 start_atlas.sh
2026-01-08 13:45:38 (35416): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan  8 03:49 EVNT.47898824._000694.pool.root.1 -> /data/./ATLAS.root_0
2026-01-08 13:45:38 (35416): Guest Log: -rw-r--r--. 1 atlas atlas      2515 Jan  8 03:49 pandaJob.out
2026-01-08 13:45:38 (35416): Guest Log: -rw-------. 1 atlas atlas        50 Jan  8 03:49 setup.sh.local
2026-01-08 13:45:38 (35416): Guest Log: -rw-------. 1 atlas atlas    989835 Jan  8 03:49 agis_schedconf.cvmfs.json
2026-01-08 13:45:38 (35416): Guest Log: drwx------. 5 atlas atlas      4096 Jan  8 03:49 pilot3
2026-01-08 13:45:38 (35416): Guest Log: -rw-------. 1 atlas atlas        95 Jan  8 12:43 pilot_heartbeat.json
2026-01-08 13:45:38 (35416): Guest Log: -rw-------. 1 atlas atlas 220409793 Jan  8 12:43 HITS.47898826._010842.pool.root.1
2026-01-08 13:45:38 (35416): Guest Log: -rw-------. 1 atlas atlas      1022 Jan  8 12:44 memory_monitor_summary.json
2026-01-08 13:45:38 (35416): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan  8 12:44 agis_ddmendpoints.agis.ALL.json
2026-01-08 13:45:38 (35416): Guest Log: -rw-------. 1 atlas atlas    596340 Jan  8 12:44 log.47898826._010842.job.log.tgz.1
2026-01-08 13:45:38 (35416): Guest Log: -rw-------. 1 atlas atlas      7812 Jan  8 12:44 heartbeat.json
2026-01-08 13:45:38 (35416): Guest Log: -rw-------. 1 atlas atlas      4684 Jan  8 12:45 pilotlog.txt
2026-01-08 13:45:38 (35416): Guest Log: -rw-------. 1 atlas atlas   4586479 Jan  8 12:45 log.47898826._010842.job.log.1
2026-01-08 13:45:38 (35416): Guest Log: -rw-------. 1 atlas atlas       357 Jan  8 12:45 output.list
2026-01-08 13:45:38 (35416): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan  8 12:45 runtime_log
2026-01-08 13:45:38 (35416): Guest Log: -rw-------. 1 atlas atlas   5201920 Jan  8 12:45 result.tar.gz
2026-01-08 13:45:38 (35416): Guest Log: -rw-------. 1 atlas atlas       658 Jan  8 12:45 WDLNDmQipx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpWiKDmHnRwIm.diag
2026-01-08 13:45:38 (35416): Guest Log: -rw-r--r--. 1 atlas atlas      9115 Jan  8 12:45 runtime_log.err
2026-01-08 13:45:38 (35416): Guest Log: Looking for outputfile HITS.47898826._010842.pool.root.1
2026-01-08 13:45:38 (35416): Guest Log: HITS file was successfully produced
2026-01-08 13:45:38 (35416): Guest Log: -rw-------. 1 atlas atlas 220409793 Jan  8 12:43 /home/atlas/RunAtlas/HITS.47898826._010842.pool.root.1
2026-01-08 13:45:39 (35416): Guest Log: Successfully finished the ATLAS job!
2026-01-08 13:45:39 (35416): Guest Log: Copying the results back to the shared directory!
2026-01-08 13:45:39 (35416): Guest Log:  *** Contents of shared directory: ***
2026-01-08 13:45:39 (35416): Guest Log: total 441224
2026-01-08 13:45:39 (35416): Guest Log: -rwxrwxrwx. 1 root root 225577558 Jan  8 03:49 ATLAS.root_0
2026-01-08 13:45:39 (35416): Guest Log: -rwxrwxrwx. 1 root root 220409793 Jan  8  2026 HITS.pool.root.1
2026-01-08 13:45:39 (35416): Guest Log: -rwxrwxrwx. 1 root root      9354 Jan  8 03:49 init_data.xml
2026-01-08 13:45:39 (35416): Guest Log: -rwxrwxrwx. 1 root root    592396 Jan  8 03:35 input.tar.gz
2026-01-08 13:45:39 (35416): Guest Log: -rwxrwxrwx. 1 root root   5201920 Jan  8  2026 result.tar.gz
2026-01-08 13:45:39 (35416): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  8 03:35 start_atlas.sh
2026-01-08 13:45:39 (35416): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-08 13:45:39 (35416): VM Completion File Detected.
2026-01-08 13:45:39 (35416): Powering off VM.
2026-01-08 13:45:39 (35416): Successfully stopped VM.
2026-01-08 13:45:39 (35416): Deregistering VM. (boinc_d6676333d48e1d7d, slot#23)
2026-01-08 13:45:39 (35416): Removing network bandwidth throttle group from VM.
2026-01-08 13:45:40 (35416): Removing VM from VirtualBox.
2026-01-08 13:45:45 (35416): called boinc_finish(0)

</stderr_txt>
]]>

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