Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
03:38:30 (4261): wrapper (7.7.26015): starting
03:38:30 (4261): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 03:38:30] Arguments: --nthreads 4
[2026-01-08 03:38:30] Threads: 4
[2026-01-08 03:38:30] Checking for CVMFS
[2026-01-08 03:38:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 03:38:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 03:38:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 03:38:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 03:38:42] 2.11.5.0 4484 0 25484 154889 3 1 2742976 4194304 0 130560 0 0 0.000 1335 1117 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-01-08 03:38:42] CVMFS is ok
[2026-01-08 03:38:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 03:38:42] Checking for apptainer binary...
[2026-01-08 03:38:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 03:38:42] Running /usr/bin/apptainer --version
[2026-01-08 03:38:43] apptainer version 1.0.3
[2026-01-08 03:38:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 03:38:44] TeeC31
[2026-01-08 03:38:44] apptainer works
[2026-01-08 03:38:44] Set ATHENA_PROC_NUMBER=4
[2026-01-08 03:38:44] Set ATHENA_CORE_NUMBER=4
[2026-01-08 03:38:44] Starting ATLAS job with PandaID=6962323787
[2026-01-08 03:38:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 07:31:32]  *** The last 200 lines of the pilot log: ***
[2026-01-08 07:31:32] 2026-01-08 07:30:58,922 | INFO     | monitor loop #1050: job 0:6962323787 is in state 'finished'
[2026-01-08 07:31:32] 2026-01-08 07:30:58,923 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 07:31:32] 2026-01-08 07:30:59,691 | INFO     | PID=8564 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 07:31:32] 2026-01-08 07:31:00,692 | INFO     | time since job start (13916s) is within the limit (174528.0s)
[2026-01-08 07:31:32] 2026-01-08 07:31:01,426 | INFO     | monitor loop #1051: job 0:6962323787 is in state 'finished'
[2026-01-08 07:31:32] 2026-01-08 07:31:01,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 07:31:32] 2026-01-08 07:31:02,697 | INFO     | time since job start (13918s) is within the limit (174528.0s)
[2026-01-08 07:31:32] 2026-01-08 07:31:03,930 | INFO     | monitor loop #1052: job 0:6962323787 is in state 'finished'
[2026-01-08 07:31:32] 2026-01-08 07:31:03,931 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 07:31:32] 2026-01-08 07:31:04,700 | INFO     | time since job start (13920s) is within the limit (174528.0s)
[2026-01-08 07:31:32] 2026-01-08 07:31:04,783 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 07:31:32] 2026-01-08 07:31:04,784 | INFO     | found 2 cores (2 cores per socket, 1 socket) HT, CPU MHz: 3200.0609999999997
[2026-01-08 07:31:32] 2026-01-08 07:31:04,785 | INFO     | using path: /home/m/BOINC/slots/3/PanDA_Pilot-6962323787/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 07:31:32] 2026-01-08 07:31:04,785 | INFO     | extracted standard info from prmon json
[2026-01-08 07:31:32] 2026-01-08 07:31:04,786 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 07:31:32] 2026-01-08 07:31:04,786 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 07:31:32] 2026-01-08 07:31:04,786 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 07:31:32] 2026-01-08 07:31:04,786 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 07:31:32] 2026-01-08 07:31:04,791 | INFO     | fitting pss+swap vs Time
[2026-01-08 07:31:32] 2026-01-08 07:31:04,791 | INFO     | sum of square deviations: 3675274316.6798153
[2026-01-08 07:31:32] 2026-01-08 07:31:04,794 | INFO     | sum of deviations: -43581250258.98245
[2026-01-08 07:31:32] 2026-01-08 07:31:04,794 | INFO     | mean x: 1767850496.6008773
[2026-01-08 07:31:32] 2026-01-08 07:31:04,794 | INFO     | mean y: 2386364.9122807016
[2026-01-08 07:31:32] 2026-01-08 07:31:04,794 | INFO     | intersect: 20965484156.869915
[2026-01-08 07:31:32] 2026-01-08 07:31:04,794 | INFO     | chi2: 2.6105673242123633
[2026-01-08 07:31:32] 2026-01-08 07:31:04,795 | INFO     | sum of square deviations: 3438755966.6277905
[2026-01-08 07:31:32] 2026-01-08 07:31:04,797 | INFO     | sum of deviations: -29332583990.34081
[2026-01-08 07:31:32] 2026-01-08 07:31:04,797 | INFO     | mean x: 1767850344.103139
[2026-01-08 07:31:32] 2026-01-08 07:31:04,797 | INFO     | mean y: 2395401.0582959643
[2026-01-08 07:31:32] 2026-01-08 07:31:04,798 | INFO     | intersect: 15082156571.668589
[2026-01-08 07:31:32] 2026-01-08 07:31:04,798 | INFO     | chi2: 1.9614050926392792
[2026-01-08 07:31:32] 2026-01-08 07:31:04,798 | INFO     | current chi2=1.9614050926392792 (change=24.866710984706874 %)
[2026-01-08 07:31:32] 2026-01-08 07:31:04,798 | INFO     | right removable region: 222
[2026-01-08 07:31:32] 2026-01-08 07:31:04,799 | INFO     | sum of square deviations: 3438741936.6277905
[2026-01-08 07:31:32] 2026-01-08 07:31:04,801 | INFO     | sum of deviations: -76206183587.93275
[2026-01-08 07:31:32] 2026-01-08 07:31:04,801 | INFO     | mean x: 1767850649.103139
[2026-01-08 07:31:32] 2026-01-08 07:31:04,801 | INFO     | mean y: 2407175.475336323
[2026-01-08 07:31:32] 2026-01-08 07:31:04,801 | INFO     | intersect: 39179860326.761955
[2026-01-08 07:31:32] 2026-01-08 07:31:04,802 | INFO     | chi2: 1.1137991407058336
[2026-01-08 07:31:32] 2026-01-08 07:31:04,802 | INFO     | current chi2=1.1137991407058336 (change=57.33497732942479 %)
[2026-01-08 07:31:32] 2026-01-08 07:31:04,802 | INFO     | sum of square deviations: 3212581844.0734096
[2026-01-08 07:31:32] 2026-01-08 07:31:04,805 | INFO     | sum of deviations: -67226398752.30277
[2026-01-08 07:31:32] 2026-01-08 07:31:04,805 | INFO     | mean x: 1767850801.6055045
[2026-01-08 07:31:32] 2026-01-08 07:31:04,805 | INFO     | mean y: 2401100.752293578
[2026-01-08 07:31:32] 2026-01-08 07:31:04,805 | INFO     | intersect: 36996398045.15949
[2026-01-08 07:31:32] 2026-01-08 07:31:04,805 | INFO     | chi2: 1.0964219439175047
[2026-01-08 07:31:32] 2026-01-08 07:31:04,805 | INFO     | current chi2=1.0964219439175047 (change=1.5601732981511112 %)
[2026-01-08 07:31:32] 2026-01-08 07:31:04,805 | INFO     | left removable region: 20
[2026-01-08 07:31:32] 2026-01-08 07:31:04,806 | INFO     | sum of square deviations: 2555879267.881201
[2026-01-08 07:31:32] 2026-01-08 07:31:04,808 | INFO     | sum of deviations: -30633119265.029705
[2026-01-08 07:31:32] 2026-01-08 07:31:04,808 | INFO     | mean x: 1767850923.6138613
[2026-01-08 07:31:32] 2026-01-08 07:31:04,808 | INFO     | mean y: 2394086.6534653464
[2026-01-08 07:31:32] 2026-01-08 07:31:04,808 | INFO     | intersect: 21190714234.009304
[2026-01-08 07:31:32] 2026-01-08 07:31:04,809 | INFO     | chi2: 0.32735144516572895
[2026-01-08 07:31:32] 2026-01-08 07:31:04,809 | INFO     | current memory leak: -11.99 B/s (using 202 data points, chi2=0.33)
[2026-01-08 07:31:32] 2026-01-08 07:31:04,809 | INFO     | could have reported an average CPU frequency of 3109 MHz (11 samples)
[2026-01-08 07:31:32] 2026-01-08 07:31:04,809 | INFO     | ..............................
[2026-01-08 07:31:32] 2026-01-08 07:31:04,809 | INFO     | . Timing measurements:
[2026-01-08 07:31:32] 2026-01-08 07:31:04,809 | INFO     | . get job = 0 s
[2026-01-08 07:31:32] 2026-01-08 07:31:04,809 | INFO     | . initial setup = 3 s
[2026-01-08 07:31:32] 2026-01-08 07:31:04,810 | INFO     | . payload setup = 7 s
[2026-01-08 07:31:32] 2026-01-08 07:31:04,810 | INFO     | . stage-in = 0 s
[2026-01-08 07:31:32] 2026-01-08 07:31:04,810 | INFO     | . payload execution = 13863 s
[2026-01-08 07:31:32] 2026-01-08 07:31:04,810 | INFO     | . stage-out = 1 s
[2026-01-08 07:31:32] 2026-01-08 07:31:04,810 | INFO     | . log creation = 0 s
[2026-01-08 07:31:32] 2026-01-08 07:31:04,810 | INFO     | ..............................
[2026-01-08 07:31:32] 2026-01-08 07:31:04,909 | INFO     | 
[2026-01-08 07:31:32] 2026-01-08 07:31:04,909 | INFO     | job summary report
[2026-01-08 07:31:32] 2026-01-08 07:31:04,909 | INFO     | --------------------------------------------------
[2026-01-08 07:31:32] 2026-01-08 07:31:04,909 | INFO     | PanDA job id: 6962323787
[2026-01-08 07:31:32] 2026-01-08 07:31:04,909 | INFO     | task id: 47898826
[2026-01-08 07:31:32] 2026-01-08 07:31:04,909 | INFO     | errors: (none)
[2026-01-08 07:31:32] 2026-01-08 07:31:04,909 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 07:31:32] 2026-01-08 07:31:04,909 | INFO     | pilot state: finished 
[2026-01-08 07:31:32] 2026-01-08 07:31:04,909 | INFO     | transexitcode: 0
[2026-01-08 07:31:32] 2026-01-08 07:31:04,910 | INFO     | exeerrorcode: 0
[2026-01-08 07:31:32] 2026-01-08 07:31:04,910 | INFO     | exeerrordiag: 
[2026-01-08 07:31:32] 2026-01-08 07:31:04,910 | INFO     | exitcode: 0
[2026-01-08 07:31:32] 2026-01-08 07:31:04,910 | INFO     | exitmsg: OK
[2026-01-08 07:31:32] 2026-01-08 07:31:04,910 | INFO     | cpuconsumptiontime: 53547 s
[2026-01-08 07:31:32] 2026-01-08 07:31:04,910 | INFO     | nevents: 400
[2026-01-08 07:31:32] 2026-01-08 07:31:04,910 | INFO     | neventsw: 0
[2026-01-08 07:31:32] 2026-01-08 07:31:04,910 | INFO     | pid: 14949
[2026-01-08 07:31:32] 2026-01-08 07:31:04,910 | INFO     | pgrp: 14949
[2026-01-08 07:31:32] 2026-01-08 07:31:04,910 | INFO     | corecount: 4
[2026-01-08 07:31:32] 2026-01-08 07:31:04,910 | INFO     | event service: False
[2026-01-08 07:31:32] 2026-01-08 07:31:04,910 | INFO     | sizes: {0: 2283141, 1: 2283996, 5: 2284258, 12: 2284314, 13875: 2314925, 13877: 2324105, 13905: 2324243}
[2026-01-08 07:31:32] 2026-01-08 07:31:04,910 | INFO     | --------------------------------------------------
[2026-01-08 07:31:32] 2026-01-08 07:31:04,911 | INFO     | 
[2026-01-08 07:31:32] 2026-01-08 07:31:04,911 | INFO     | executing command: ls -lF /home/m/BOINC/slots/3
[2026-01-08 07:31:32] 2026-01-08 07:31:04,918 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 07:31:32] 2026-01-08 07:31:04,919 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 07:31:32] 2026-01-08 07:31:04,919 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 07:31:32] 2026-01-08 07:31:04,919 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 07:31:32] 2026-01-08 07:31:04,919 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 07:31:32] 2026-01-08 07:31:04,919 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 07:31:32] 2026-01-08 07:31:04,919 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 07:31:32] 2026-01-08 07:31:04,919 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 07:31:32] 2026-01-08 07:31:04,919 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 07:31:32] 2026-01-08 07:31:04,919 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 07:31:32] 2026-01-08 07:31:04,919 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 07:31:32] 2026-01-08 07:31:04,920 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 07:31:32] 2026-01-08 07:31:04,920 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 07:31:32] 2026-01-08 07:31:04,920 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 07:31:32] 2026-01-08 07:31:04,920 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 07:31:32] 2026-01-08 07:31:04,920 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 07:31:32] 2026-01-08 07:31:04,920 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 07:31:32] 2026-01-08 07:31:04,920 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 07:31:32] 2026-01-08 07:31:04,920 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 07:31:32] 2026-01-08 07:31:04,920 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 07:31:32] 2026-01-08 07:31:04,920 | INFO     | job 6962323787 has completed (purged errors)
[2026-01-08 07:31:32] 2026-01-08 07:31:04,920 | INFO     | overall cleanup function is called
[2026-01-08 07:31:32] 2026-01-08 07:31:05,927 | INFO     | --- collectZombieJob: --- 10, [14949]
[2026-01-08 07:31:32] 2026-01-08 07:31:05,927 | INFO     | zombie collector waiting for pid 14949
[2026-01-08 07:31:32] 2026-01-08 07:31:05,928 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 07:31:32] 2026-01-08 07:31:05,928 | INFO     | collected zombie processes
[2026-01-08 07:31:32] 2026-01-08 07:31:05,928 | INFO     | will attempt to kill all subprocesses of pid=14949
[2026-01-08 07:31:32] 2026-01-08 07:31:06,009 | INFO     | process IDs to be killed: [14949] (in reverse order)
[2026-01-08 07:31:32] 2026-01-08 07:31:06,032 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 07:31:32] 2026-01-08 07:31:06,033 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 07:31:32] 2026-01-08 07:31:06,035 | INFO     | did not find any defunct processes belonging to 14949
[2026-01-08 07:31:32] 2026-01-08 07:31:06,036 | INFO     | did not find any defunct processes belonging to 14949
[2026-01-08 07:31:32] 2026-01-08 07:31:06,037 | INFO     | ready for new job
[2026-01-08 07:31:32] 2026-01-08 07:31:06,037 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 07:31:32] 2026-01-08 07:31:06,038 | INFO     | ***************************************
[2026-01-08 07:31:32] 2026-01-08 07:31:06,038 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 07:31:32] 2026-01-08 07:31:06,038 | INFO     | ***************************************
[2026-01-08 07:31:32] 2026-01-08 07:31:06,038 | INFO     | 
[2026-01-08 07:31:32] 2026-01-08 07:31:06,059 | INFO     | architecture information:
[2026-01-08 07:31:32] 2026-01-08 07:31:06,059 | INFO     | executing command: cat /etc/os-release
[2026-01-08 07:31:32] 2026-01-08 07:31:06,066 | INFO     | cat /etc/os-release:
[2026-01-08 07:31:32] NAME="CentOS Linux"
[2026-01-08 07:31:32] VERSION="7 (Core)"
[2026-01-08 07:31:32] ID="centos"
[2026-01-08 07:31:32] ID_LIKE="rhel fedora"
[2026-01-08 07:31:32] VERSION_ID="7"
[2026-01-08 07:31:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 07:31:32] ANSI_COLOR="0;31"
[2026-01-08 07:31:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 07:31:32] HOME_URL="https://www.centos.org/"
[2026-01-08 07:31:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 07:31:32] 
[2026-01-08 07:31:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 07:31:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 07:31:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 07:31:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 07:31:32] 
[2026-01-08 07:31:32] 2026-01-08 07:31:06,066 | INFO     | ***************************************
[2026-01-08 07:31:32] 2026-01-08 07:31:06,570 | INFO     | executing command: df -mP /home/m/BOINC/slots/3
[2026-01-08 07:31:32] 2026-01-08 07:31:06,581 | INFO     | sufficient remaining disk space (414716002304 B)
[2026-01-08 07:31:32] 2026-01-08 07:31:06,581 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 07:31:32] 2026-01-08 07:31:06,582 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 07:31:32] 2026-01-08 07:31:06,582 | INFO     | update_server=False
[2026-01-08 07:31:32] 2026-01-08 07:31:06,582 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 07:31:32] 2026-01-08 07:31:06,582 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-08 07:31:32] 2026-01-08 07:31:06,583 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 07:31:32] 2026-01-08 07:31:06,583 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 07:31:32] 2026-01-08 07:31:06,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 07:31:32] 2026-01-08 07:31:06,583 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 07:31:32] 2026-01-08 07:31:06,586 | INFO     | all data control threads have been joined
[2026-01-08 07:31:32] 2026-01-08 07:31:07,122 | INFO     | all payload control threads have been joined
[2026-01-08 07:31:32] 2026-01-08 07:31:07,324 | INFO     | all job control threads have been joined
[2026-01-08 07:31:32] 2026-01-08 07:31:07,440 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 07:31:32] 2026-01-08 07:31:07,441 | INFO     | aborting loop
[2026-01-08 07:31:32] 2026-01-08 07:31:07,441 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 07:31:32] 2026-01-08 07:31:07,587 | INFO     | [data] control thread has finished
[2026-01-08 07:31:32] 2026-01-08 07:31:07,589 | INFO     | [job] retrieve thread has finished
[2026-01-08 07:31:32] 2026-01-08 07:31:07,590 | INFO     | [job] queue monitor thread has finished
[2026-01-08 07:31:32] 2026-01-08 07:31:07,619 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 07:31:32] 2026-01-08 07:31:07,620 | INFO     | [data] copytool_in thread has finished
[2026-01-08 07:31:32] 2026-01-08 07:31:07,635 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 07:31:32] 2026-01-08 07:31:08,128 | INFO     | [payload] control thread has finished
[2026-01-08 07:31:32] 2026-01-08 07:31:08,129 | INFO     | [payload] validate_post thread has finished
[2026-01-08 07:31:32] 2026-01-08 07:31:08,330 | INFO     | [job] control thread has finished
[2026-01-08 07:31:32] 2026-01-08 07:31:08,403 | INFO     | [payload] failed_post thread has finished
[2026-01-08 07:31:32] 2026-01-08 07:31:08,416 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 07:31:32] 2026-01-08 07:31:08,447 | INFO     | [job] job monitor thread has finished
[2026-01-08 07:31:32] 2026-01-08 07:31:09,047 | INFO     | [job] validate thread has finished
[2026-01-08 07:31:32] 2026-01-08 07:31:09,047 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 07:31:32] 2026-01-08 07:31:09,447 | INFO     | [data] copytool_out thread has finished
[2026-01-08 07:31:32] 2026-01-08 07:31:10,028 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 07:31:32] 2026-01-08 07:31:14,035 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 07:31:32] 2026-01-08 07:31:26,549 | INFO     | [monitor] cgroup control has ended
[2026-01-08 07:31:32] 2026-01-08 07:31:27,555 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140341336487744)>', '<ExcThread(monitor, started 140341034329856)>']
[2026-01-08 07:31:32] 2026-01-08 07:31:27,695 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 07:31:32] 2026-01-08 07:31:27,696 | INFO     | [monitor] control thread has ended
[2026-01-08 07:31:32] 2026-01-08 07:31:32,562 | INFO     | all workflow threads have been joined
[2026-01-08 07:31:32] 2026-01-08 07:31:32,563 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 07:31:32] 2026-01-08 07:31:32,563 | INFO     | traces error code: 0
[2026-01-08 07:31:32] 2026-01-08 07:31:32,564 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 07:31:32] 2026-01-08 07:31:32,670 [wrapper] ==== pilot stdout END ====
[2026-01-08 07:31:32] 2026-01-08 07:31:32,672 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 07:31:32] 2026-01-08 07:31:32,674 [wrapper] pilotpid: 8564
[2026-01-08 07:31:32] 2026-01-08 07:31:32,676 [wrapper] Pilot exit status: 0
[2026-01-08 07:31:32] 2026-01-08 07:31:32,690 [wrapper] pandaids: 6962323787
[2026-01-08 07:31:32] 2026-01-08 07:31:32,707 [wrapper] cleanup supervisor_pilot  7623 8565
[2026-01-08 07:31:32] 2026-01-08 07:31:32,709 [wrapper] Test setup, not cleaning
[2026-01-08 07:31:32] 2026-01-08 07:31:32,711 [wrapper] apfmon messages muted
[2026-01-08 07:31:32] 2026-01-08 07:31:32,713 [wrapper] ==== wrapper stdout END ====
[2026-01-08 07:31:32] 2026-01-08 07:31:32,714 [wrapper] ==== wrapper stderr END ====
[2026-01-08 07:31:32]  *** Error codes and diagnostics ***
[2026-01-08 07:31:32]     "exeErrorCode": 0,
[2026-01-08 07:31:32]     "exeErrorDiag": "",
[2026-01-08 07:31:32]     "pilotErrorCode": 0,
[2026-01-08 07:31:32]     "pilotErrorDiag": "",
[2026-01-08 07:31:32]  *** Listing of results directory ***
[2026-01-08 07:31:32] total 442444
[2026-01-08 07:31:32] -rw-r--r-- 1 m m    579449 Jan  7 21:00 pilot3.tar.gz
[2026-01-08 07:31:32] -rwx------ 1 m m     36322 Jan  7 21:09 runpilot2-wrapper.sh
[2026-01-08 07:31:32] -rw-r--r-- 1 m m      5112 Jan  7 21:16 queuedata.json
[2026-01-08 07:31:32] -rw-rw-r-- 1 m m       100 Jan  8 03:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 07:31:32] -rwxr-xr-x 1 m m      7986 Jan  8 03:38 run_atlas
[2026-01-08 07:31:32] -rw-rw-r-- 1 m m       105 Jan  8 03:38 job.xml
[2026-01-08 07:31:32] -rw-r--r-- 2 m m     15847 Jan  8 03:38 start_atlas.sh
[2026-01-08 07:31:32] drwxrwx--x 2 m m      4096 Jan  8 03:38 shared
[2026-01-08 07:31:32] -rw-r--r-- 2 m m    592399 Jan  8 03:38 input.tar.gz
[2026-01-08 07:31:32] -rw-rw-r-- 1 m m      6005 Jan  8 03:38 init_data.xml
[2026-01-08 07:31:32] -rw-r--r-- 2 m m 225694064 Jan  8 03:38 EVNT.47898824._000760.pool.root.1
[2026-01-08 07:31:32] -rw-rw-r-- 1 m m         0 Jan  8 03:38 boinc_lockfile
[2026-01-08 07:31:32] -rw-rw-r-- 1 m m      2519 Jan  8 03:38 pandaJob.out
[2026-01-08 07:31:32] -rw------- 1 m m    989835 Jan  8 03:39 agis_schedconf.cvmfs.json
[2026-01-08 07:31:32] drwx------ 5 m m      4096 Jan  8 03:39 pilot3
[2026-01-08 07:31:32] -rw-rw-r-- 1 m m       530 Jan  8 07:30 boinc_task_state.xml
[2026-01-08 07:31:32] -rw------- 1 m m 218783340 Jan  8 07:30 HITS.47898826._016412.pool.root.1
[2026-01-08 07:31:32] -rw------- 1 m m      1029 Jan  8 07:30 memory_monitor_summary.json
[2026-01-08 07:31:32] -rw------- 1 m m   1516240 Jan  8 07:30 agis_ddmendpoints.agis.ALL.json
[2026-01-08 07:31:32] -rw------- 1 m m    401181 Jan  8 07:30 log.47898826._016412.job.log.tgz.1
[2026-01-08 07:31:32] -rw------- 1 m m        95 Jan  8 07:31 pilot_heartbeat.json
[2026-01-08 07:31:32] -rw-rw-r-- 1 m m        28 Jan  8 07:31 wrapper_checkpoint.txt
[2026-01-08 07:31:32] -rw-rw-r-- 1 m m      8192 Jan  8 07:31 boinc_mmap_file
[2026-01-08 07:31:32] -rw------- 1 m m      7788 Jan  8 07:31 heartbeat.json
[2026-01-08 07:31:32] -rw------- 1 m m      4552 Jan  8 07:31 pilotlog.txt
[2026-01-08 07:31:32] -rw------- 1 m m   1936333 Jan  8 07:31 log.47898826._016412.job.log.1
[2026-01-08 07:31:32] -rw------- 1 m m       357 Jan  8 07:31 output.list
[2026-01-08 07:31:32] -rw-rw-r-- 1 m m       620 Jan  8 07:31 runtime_log
[2026-01-08 07:31:32] -rw------- 1 m m   2355200 Jan  8 07:31 result.tar.gz
[2026-01-08 07:31:32] -rw------- 1 m m       645 Jan  8 07:31 ThqNDmoxpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmaEjKDmecBaPm.diag
[2026-01-08 07:31:32] -rw-rw-r-- 1 m m      8730 Jan  8 07:31 runtime_log.err
[2026-01-08 07:31:32] -rw-rw-r-- 1 m m     21068 Jan  8 07:31 stderr.txt
[2026-01-08 07:31:32] HITS file was successfully produced:
[2026-01-08 07:31:32] -rw------- 1 m m 218783340 Jan  8 07:30 shared/HITS.pool.root.1
[2026-01-08 07:31:32]  *** Contents of shared directory: ***
[2026-01-08 07:31:32] total 436968
[2026-01-08 07:31:32] -rw-r--r-- 2 m m     15847 Jan  8 03:38 start_atlas.sh
[2026-01-08 07:31:32] -rw-r--r-- 2 m m    592399 Jan  8 03:38 input.tar.gz
[2026-01-08 07:31:32] -rw-r--r-- 2 m m 225694064 Jan  8 03:38 ATLAS.root_0
[2026-01-08 07:31:32] -rw------- 1 m m 218783340 Jan  8 07:30 HITS.pool.root.1
[2026-01-08 07:31:32] -rw------- 1 m m   2355200 Jan  8 07:31 result.tar.gz
07:31:33 (4261): run_atlas exited; CPU time 53695.205102
07:31:33 (4261): called boinc_finish(0)

</stderr_txt>
]]>

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