Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:51:16 (28374): wrapper (7.7.26015): starting
11:51:16 (28374): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 11:51:16] Arguments: --nthreads 8
[2026-01-08 11:51:16] Threads: 8
[2026-01-08 11:51:16] Checking for CVMFS
[2026-01-08 11:51:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 11:51:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 11:51:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 11:51:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 11:51:19] 2.11.2.0 32220 33879 97632 154901 0 61 16867550 25165825 96 130560 0 14711516 99.807 9245272 4034 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 11:51:19] CVMFS is ok
[2026-01-08 11:51:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 11:51:20] Checking for apptainer binary...
[2026-01-08 11:51:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 11:51:20] Running /usr/bin/apptainer --version
[2026-01-08 11:51:20] apptainer version 1.3.2-1.el7
[2026-01-08 11:51:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 11:51:38] cg-vwn447.simple-grid.lan
[2026-01-08 11:51:38] apptainer works
[2026-01-08 11:51:38] Set ATHENA_PROC_NUMBER=8
[2026-01-08 11:51:38] Set ATHENA_CORE_NUMBER=8
[2026-01-08 11:51:38] Starting ATLAS job with PandaID=6962323578
[2026-01-08 11:51:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 18:05:29]  *** The last 200 lines of the pilot log: ***
[2026-01-08 18:05:29] 2026-01-08 17:04:32,886 | INFO     | time since job start (22132s) is within the limit (174528.0s)
[2026-01-08 18:05:29] 2026-01-08 17:04:32,912 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 18:05:29] 2026-01-08 17:04:32,913 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 18:05:29] 2026-01-08 17:04:32,915 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6962323578/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 18:05:29] 2026-01-08 17:04:32,916 | INFO     | extracted standard info from prmon json
[2026-01-08 18:05:29] 2026-01-08 17:04:32,916 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 18:05:29] 2026-01-08 17:04:32,917 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 18:05:29] 2026-01-08 17:04:32,917 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 18:05:29] 2026-01-08 17:04:32,917 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 18:05:29] 2026-01-08 17:04:32,925 | INFO     | fitting pss+swap vs Time
[2026-01-08 18:05:29] 2026-01-08 17:04:32,926 | INFO     | sum of square deviations: 13523929848.0
[2026-01-08 18:05:29] 2026-01-08 17:04:32,930 | INFO     | sum of deviations: 218609006779.5
[2026-01-08 18:05:29] 2026-01-08 17:04:32,930 | INFO     | mean x: 1767880994.5
[2026-01-08 18:05:29] 2026-01-08 17:04:32,931 | INFO     | mean y: 2435979.196022727
[2026-01-08 18:05:29] 2026-01-08 17:04:32,931 | INFO     | intersect: -28574664956.384026
[2026-01-08 18:05:29] 2026-01-08 17:04:32,931 | INFO     | chi2: 8.026967353911854
[2026-01-08 18:05:29] 2026-01-08 17:04:32,932 | INFO     | sum of square deviations: 12955770358.0
[2026-01-08 18:05:29] 2026-01-08 17:04:32,936 | INFO     | sum of deviations: 238427573872.0
[2026-01-08 18:05:29] 2026-01-08 17:04:32,936 | INFO     | mean x: 1767880842.0
[2026-01-08 18:05:29] 2026-01-08 17:04:32,936 | INFO     | mean y: 2441226.2708933717
[2026-01-08 18:05:29] 2026-01-08 17:04:32,936 | INFO     | intersect: -32532215409.763973
[2026-01-08 18:05:29] 2026-01-08 17:04:32,937 | INFO     | chi2: 7.296224669178921
[2026-01-08 18:05:29] 2026-01-08 17:04:32,937 | INFO     | current chi2=7.296224669178921 (change=9.103596072018574 %)
[2026-01-08 18:05:29] 2026-01-08 17:04:32,937 | INFO     | right removable region: 346
[2026-01-08 18:05:29] 2026-01-08 17:04:32,938 | INFO     | sum of square deviations: 12955770358.0
[2026-01-08 18:05:29] 2026-01-08 17:04:32,941 | INFO     | sum of deviations: 95563685861.00002
[2026-01-08 18:05:29] 2026-01-08 17:04:32,942 | INFO     | mean x: 1767881147.0
[2026-01-08 18:05:29] 2026-01-08 17:04:32,942 | INFO     | mean y: 2468998.077809798
[2026-01-08 18:05:29] 2026-01-08 17:04:32,942 | INFO     | intersect: -13037684840.95432
[2026-01-08 18:05:29] 2026-01-08 17:04:32,943 | INFO     | chi2: 3.2009248289693644
[2026-01-08 18:05:29] 2026-01-08 17:04:32,943 | INFO     | current chi2=3.2009248289693644 (change=60.12286224872424 %)
[2026-01-08 18:05:29] 2026-01-08 17:04:32,943 | INFO     | sum of square deviations: 12403750705.5
[2026-01-08 18:05:29] 2026-01-08 17:04:32,947 | INFO     | sum of deviations: 8329524166.500004
[2026-01-08 18:05:29] 2026-01-08 17:04:32,947 | INFO     | mean x: 1767881299.5
[2026-01-08 18:05:29] 2026-01-08 17:04:32,948 | INFO     | mean y: 2493061.985380117
[2026-01-08 18:05:29] 2026-01-08 17:04:32,948 | INFO     | intersect: -1184697035.3743753
[2026-01-08 18:05:29] 2026-01-08 17:04:32,948 | INFO     | chi2: 0.8610065204565429
[2026-01-08 18:05:29] 2026-01-08 17:04:32,949 | INFO     | current chi2=0.8610065204565429 (change=73.10132019770766 %)
[2026-01-08 18:05:29] 2026-01-08 17:04:32,949 | INFO     | sum of square deviations: 11867638328.0
[2026-01-08 18:05:29] 2026-01-08 17:04:32,953 | INFO     | sum of deviations: 1351043555.0
[2026-01-08 18:05:29] 2026-01-08 17:04:32,953 | INFO     | mean x: 1767881452.0
[2026-01-08 18:05:29] 2026-01-08 17:04:32,953 | INFO     | mean y: 2495015.0
[2026-01-08 18:05:29] 2026-01-08 17:04:32,954 | INFO     | intersect: -198765317.9925679
[2026-01-08 18:05:29] 2026-01-08 17:04:32,954 | INFO     | chi2: 0.7938621609140215
[2026-01-08 18:05:29] 2026-01-08 17:04:32,954 | INFO     | current chi2=0.7938621609140215 (change=7.79835668456013 %)
[2026-01-08 18:05:29] 2026-01-08 17:04:32,954 | INFO     | left removable region: 30
[2026-01-08 18:05:29] 2026-01-08 17:04:32,955 | INFO     | sum of square deviations: 9784425315.0
[2026-01-08 18:05:29] 2026-01-08 17:04:32,958 | INFO     | sum of deviations: 14862268658.500002
[2026-01-08 18:05:29] 2026-01-08 17:04:32,959 | INFO     | mean x: 1767881726.5
[2026-01-08 18:05:29] 2026-01-08 17:04:32,959 | INFO     | mean y: 2503936.0411392404
[2026-01-08 18:05:29] 2026-01-08 17:04:32,959 | INFO     | intersect: -2682859008.619022
[2026-01-08 18:05:29] 2026-01-08 17:04:32,959 | INFO     | chi2: 0.0006540282668981256
[2026-01-08 18:05:29] 2026-01-08 17:04:32,960 | INFO     | current memory leak: 1.52 B/s (using 316 data points, chi2=0.00)
[2026-01-08 18:05:29] 2026-01-08 17:04:32,960 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-08 18:05:29] 2026-01-08 17:04:32,961 | INFO     | ..............................
[2026-01-08 18:05:29] 2026-01-08 17:04:32,961 | INFO     | . Timing measurements:
[2026-01-08 18:05:29] 2026-01-08 17:04:32,961 | INFO     | . get job = 0 s
[2026-01-08 18:05:29] 2026-01-08 17:04:32,961 | INFO     | . initial setup = 12 s
[2026-01-08 18:05:29] 2026-01-08 17:04:32,961 | INFO     | . payload setup = 152 s
[2026-01-08 18:05:29] 2026-01-08 17:04:32,961 | INFO     | . stage-in = 0 s
[2026-01-08 18:05:29] 2026-01-08 17:04:32,961 | INFO     | . payload execution = 21654 s
[2026-01-08 18:05:29] 2026-01-08 17:04:32,961 | INFO     | . stage-out = 3 s
[2026-01-08 18:05:29] 2026-01-08 17:04:32,962 | INFO     | . log creation = 1 s
[2026-01-08 18:05:29] 2026-01-08 17:04:32,962 | INFO     | ..............................
[2026-01-08 18:05:29] 2026-01-08 17:04:33,085 | INFO     | 
[2026-01-08 18:05:29] 2026-01-08 17:04:33,085 | INFO     | job summary report
[2026-01-08 18:05:29] 2026-01-08 17:04:33,085 | INFO     | --------------------------------------------------
[2026-01-08 18:05:29] 2026-01-08 17:04:33,085 | INFO     | PanDA job id: 6962323578
[2026-01-08 18:05:29] 2026-01-08 17:04:33,085 | INFO     | task id: 47898826
[2026-01-08 18:05:29] 2026-01-08 17:04:33,085 | INFO     | errors: (none)
[2026-01-08 18:05:29] 2026-01-08 17:04:33,086 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 18:05:29] 2026-01-08 17:04:33,086 | INFO     | pilot state: finished 
[2026-01-08 18:05:29] 2026-01-08 17:04:33,086 | INFO     | transexitcode: 0
[2026-01-08 18:05:29] 2026-01-08 17:04:33,086 | INFO     | exeerrorcode: 0
[2026-01-08 18:05:29] 2026-01-08 17:04:33,086 | INFO     | exeerrordiag: 
[2026-01-08 18:05:29] 2026-01-08 17:04:33,086 | INFO     | exitcode: 0
[2026-01-08 18:05:29] 2026-01-08 17:04:33,086 | INFO     | exitmsg: OK
[2026-01-08 18:05:29] 2026-01-08 17:04:33,086 | INFO     | cpuconsumptiontime: 81734 s
[2026-01-08 18:05:29] 2026-01-08 17:04:33,086 | INFO     | nevents: 400
[2026-01-08 18:05:29] 2026-01-08 17:04:33,087 | INFO     | neventsw: 0
[2026-01-08 18:05:29] 2026-01-08 17:04:33,087 | INFO     | pid: 6282
[2026-01-08 18:05:29] 2026-01-08 17:04:33,087 | INFO     | pgrp: 6282
[2026-01-08 18:05:29] 2026-01-08 17:04:33,087 | INFO     | corecount: 8
[2026-01-08 18:05:29] 2026-01-08 17:04:33,087 | INFO     | event service: False
[2026-01-08 18:05:29] 2026-01-08 17:04:33,087 | INFO     | sizes: {0: 2283141, 1: 2283997, 2: 2283997, 12: 2284025, 23: 2284053, 34: 2284081, 44: 2284237, 55: 2284265, 66: 2284293, 77: 2284321, 88: 2284377, 98: 2284685, 10
[2026-01-08 18:05:29] 2026-01-08 17:04:33,087 | INFO     | --------------------------------------------------
[2026-01-08 18:05:29] 2026-01-08 17:04:33,087 | INFO     | 
[2026-01-08 18:05:29] 2026-01-08 17:04:33,088 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-08 18:05:29] 2026-01-08 17:04:33,523 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 18:05:29] 2026-01-08 17:04:33,524 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 18:05:29] 2026-01-08 17:04:33,524 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 18:05:29] 2026-01-08 17:04:33,524 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 18:05:29] 2026-01-08 17:04:33,524 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 18:05:29] 2026-01-08 17:04:33,524 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 18:05:29] 2026-01-08 17:04:33,524 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 18:05:29] 2026-01-08 17:04:33,524 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 18:05:29] 2026-01-08 17:04:33,524 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 18:05:29] 2026-01-08 17:04:33,525 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 18:05:29] 2026-01-08 17:04:33,525 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 18:05:29] 2026-01-08 17:04:33,525 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 18:05:29] 2026-01-08 17:04:33,525 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 18:05:29] 2026-01-08 17:04:33,525 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 18:05:29] 2026-01-08 17:04:33,525 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 18:05:29] 2026-01-08 17:04:33,525 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 18:05:29] 2026-01-08 17:04:33,525 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 18:05:29] 2026-01-08 17:04:33,526 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 18:05:29] 2026-01-08 17:04:33,526 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 18:05:29] 2026-01-08 17:04:33,526 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 18:05:29] 2026-01-08 17:04:33,526 | INFO     | job 6962323578 has completed (purged errors)
[2026-01-08 18:05:29] 2026-01-08 17:04:33,526 | INFO     | overall cleanup function is called
[2026-01-08 18:05:29] 2026-01-08 17:04:34,535 | INFO     | --- collectZombieJob: --- 10, [6282]
[2026-01-08 18:05:29] 2026-01-08 17:04:34,536 | INFO     | zombie collector waiting for pid 6282
[2026-01-08 18:05:29] 2026-01-08 17:04:34,536 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 18:05:29] 2026-01-08 17:04:34,536 | INFO     | collected zombie processes
[2026-01-08 18:05:29] 2026-01-08 17:04:34,536 | INFO     | will attempt to kill all subprocesses of pid=6282
[2026-01-08 18:05:29] 2026-01-08 17:04:34,626 | INFO     | process IDs to be killed: [6282] (in reverse order)
[2026-01-08 18:05:29] 2026-01-08 17:04:35,659 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 18:05:29] 2026-01-08 17:04:35,659 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 18:05:29] 2026-01-08 17:04:35,661 | INFO     | did not find any defunct processes belonging to 6282
[2026-01-08 18:05:29] 2026-01-08 17:04:35,663 | INFO     | did not find any defunct processes belonging to 6282
[2026-01-08 18:05:29] 2026-01-08 17:04:35,663 | INFO     | ready for new job
[2026-01-08 18:05:29] 2026-01-08 17:04:35,663 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 18:05:29] 2026-01-08 17:04:35,666 | INFO     | ***************************************
[2026-01-08 18:05:29] 2026-01-08 17:04:35,666 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 18:05:29] 2026-01-08 17:04:35,666 | INFO     | ***************************************
[2026-01-08 18:05:29] 2026-01-08 17:04:35,666 | INFO     | 
[2026-01-08 18:05:29] 2026-01-08 17:04:35,667 | INFO     | pilot is running in a VM
[2026-01-08 18:05:29] 2026-01-08 17:04:35,667 | INFO     | architecture information:
[2026-01-08 18:05:29] 2026-01-08 17:04:35,684 | INFO     | executing command: cat /etc/os-release
[2026-01-08 18:05:29] 2026-01-08 17:04:35,885 | INFO     | cat /etc/os-release:
[2026-01-08 18:05:29] NAME="CentOS Linux"
[2026-01-08 18:05:29] VERSION="7 (Core)"
[2026-01-08 18:05:29] ID="centos"
[2026-01-08 18:05:29] ID_LIKE="rhel fedora"
[2026-01-08 18:05:29] VERSION_ID="7"
[2026-01-08 18:05:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 18:05:29] ANSI_COLOR="0;31"
[2026-01-08 18:05:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 18:05:29] HOME_URL="https://www.centos.org/"
[2026-01-08 18:05:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 18:05:29] 
[2026-01-08 18:05:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 18:05:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 18:05:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 18:05:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 18:05:29] 
[2026-01-08 18:05:29] 2026-01-08 17:04:35,885 | INFO     | ***************************************
[2026-01-08 18:05:29] 2026-01-08 17:04:36,389 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-08 18:05:29] 2026-01-08 17:04:36,551 | INFO     | sufficient remaining disk space (497384685568 B)
[2026-01-08 18:05:29] 2026-01-08 17:04:36,551 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 18:05:29] 2026-01-08 17:04:36,552 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 18:05:29] 2026-01-08 17:04:36,552 | INFO     | update_server=False
[2026-01-08 18:05:29] 2026-01-08 17:04:36,552 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 18:05:29] 2026-01-08 17:04:36,713 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 18:05:29] 2026-01-08 17:04:36,910 | INFO     | all payload control threads have been joined
[2026-01-08 18:05:29] 2026-01-08 17:04:37,262 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 18:05:29] 2026-01-08 17:04:37,263 | INFO     | aborting loop
[2026-01-08 18:05:29] 2026-01-08 17:04:37,558 | INFO     | [job] retrieve thread has finished
[2026-01-08 18:05:29] 2026-01-08 17:04:37,628 | INFO     | all data control threads have been joined
[2026-01-08 18:05:29] 2026-01-08 17:04:37,841 | INFO     | [job] validate thread has finished
[2026-01-08 18:05:29] 2026-01-08 17:04:37,917 | INFO     | [payload] control thread has finished
[2026-01-08 18:05:29] 2026-01-08 17:04:37,929 | INFO     | [data] copytool_in thread has finished
[2026-01-08 18:05:29] 2026-01-08 17:04:37,929 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 18:05:29] 2026-01-08 17:04:38,008 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 18:05:29] 2026-01-08 17:04:38,099 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 18:05:29] 2026-01-08 17:04:38,121 | INFO     | all job control threads have been joined
[2026-01-08 18:05:29] 2026-01-08 17:04:38,268 | INFO     | [job] job monitor thread has finished
[2026-01-08 18:05:29] 2026-01-08 17:04:38,634 | INFO     | [data] control thread has finished
[2026-01-08 18:05:29] 2026-01-08 17:04:38,694 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 18:05:29] 2026-01-08 17:04:38,719 | INFO     | [data] copytool_out thread has finished
[2026-01-08 18:05:29] 2026-01-08 17:04:38,857 | INFO     | [payload] failed_post thread has finished
[2026-01-08 18:05:29] 2026-01-08 17:04:38,863 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 18:05:29] 2026-01-08 17:04:38,886 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 18:05:29] 2026-01-08 17:04:38,901 | INFO     | [payload] validate_post thread has finished
[2026-01-08 18:05:29] 2026-01-08 17:04:39,105 | INFO     | [job] queue monitor thread has finished
[2026-01-08 18:05:29] 2026-01-08 17:04:39,127 | INFO     | [job] control thread has finished
[2026-01-08 18:05:29] 2026-01-08 17:04:42,017 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 18:05:29] 2026-01-08 17:05:06,022 | INFO     | PID=32139 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 18:05:29] 2026-01-08 17:05:06,022 | INFO     | .. there are 2 such processes running
[2026-01-08 18:05:29] 2026-01-08 17:05:06,023 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 18:05:29] 2026-01-08 17:05:06,023 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 18:05:29] 2026-01-08 17:05:06,023 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 18:05:29] 2026-01-08 17:05:17,733 | INFO     | [monitor] cgroup control has ended
[2026-01-08 18:05:29] 2026-01-08 17:05:18,393 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140131795089216)>', '<ExcThread(monitor, started 140131218482944)>']
[2026-01-08 18:05:29] 2026-01-08 17:05:19,100 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 18:05:29] 2026-01-08 17:05:19,101 | INFO     | [monitor] control thread has ended
[2026-01-08 18:05:29] 2026-01-08 17:05:23,419 | INFO     | all workflow threads have been joined
[2026-01-08 18:05:29] 2026-01-08 17:05:23,420 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 18:05:29] 2026-01-08 17:05:23,420 | INFO     | traces error code: 0
[2026-01-08 18:05:29] 2026-01-08 17:05:23,420 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 18:05:29] 2026-01-08 17:05:23,892 [wrapper] ==== pilot stdout END ====
[2026-01-08 18:05:29] 2026-01-08 17:05:23,998 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 18:05:29] 2026-01-08 17:05:24,088 [wrapper] pilotpid: 32139
[2026-01-08 18:05:29] 2026-01-08 17:05:24,205 [wrapper] Pilot exit status: 0
[2026-01-08 18:05:29] 2026-01-08 17:05:24,541 [wrapper] pandaids: 6962323578
[2026-01-08 18:05:29] 2026-01-08 17:05:25,377 [wrapper] cleanup supervisor_pilot  5640 32140
[2026-01-08 18:05:29] 2026-01-08 17:05:25,492 [wrapper] Test setup, not cleaning
[2026-01-08 18:05:29] 2026-01-08 17:05:25,568 [wrapper] apfmon messages muted
[2026-01-08 18:05:29] 2026-01-08 17:05:25,631 [wrapper] ==== wrapper stdout END ====
[2026-01-08 18:05:29] 2026-01-08 17:05:25,723 [wrapper] ==== wrapper stderr END ====
[2026-01-08 18:05:29]  *** Error codes and diagnostics ***
[2026-01-08 18:05:29]     "exeErrorCode": 0,
[2026-01-08 18:05:29]     "exeErrorDiag": "",
[2026-01-08 18:05:29]     "pilotErrorCode": 0,
[2026-01-08 18:05:29]     "pilotErrorDiag": "",
[2026-01-08 18:05:29]  *** Listing of results directory ***
[2026-01-08 18:05:29] total 447708
[2026-01-08 18:05:29] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-08 18:05:29] -rwx------. 1 boinc boinc     36322 Jan  7 22:09 runpilot2-wrapper.sh
[2026-01-08 18:05:29] -rw-r--r--. 1 boinc boinc      5112 Jan  7 22:16 queuedata.json
[2026-01-08 18:05:29] -rw-r--r--. 1 boinc boinc       100 Jan  8 11:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 18:05:29] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 11:51 run_atlas
[2026-01-08 18:05:29] -rw-r--r--. 1 boinc boinc       105 Jan  8 11:51 job.xml
[2026-01-08 18:05:29] -rw-r--r--. 2 boinc boinc 226348912 Jan  8 11:51 EVNT.47898824._000753.pool.root.1
[2026-01-08 18:05:29] -rw-r--r--. 2 boinc boinc    592397 Jan  8 11:51 input.tar.gz
[2026-01-08 18:05:29] -rw-r--r--. 1 boinc boinc      6388 Jan  8 11:51 init_data.xml
[2026-01-08 18:05:29] -rw-r--r--. 2 boinc boinc     15847 Jan  8 11:51 start_atlas.sh
[2026-01-08 18:05:29] drwxrwx--x. 2 boinc boinc        68 Jan  8 11:51 shared
[2026-01-08 18:05:29] -rw-r--r--. 1 boinc boinc         0 Jan  8 11:51 boinc_lockfile
[2026-01-08 18:05:29] -rw-r--r--. 1 boinc boinc      2519 Jan  8 11:51 pandaJob.out
[2026-01-08 18:05:29] -rw-------. 1 boinc boinc    989835 Jan  8 11:55 agis_schedconf.cvmfs.json
[2026-01-08 18:05:29] drwx------. 5 boinc boinc      4096 Jan  8 11:55 pilot3
[2026-01-08 18:05:29] -rw-------. 1 boinc boinc 221215331 Jan  8 18:01 HITS.47898826._016222.pool.root.1
[2026-01-08 18:05:29] -rw-r--r--. 1 boinc boinc       531 Jan  8 18:01 boinc_task_state.xml
[2026-01-08 18:05:29] -rw-------. 1 boinc boinc      1014 Jan  8 18:02 memory_monitor_summary.json
[2026-01-08 18:05:29] -rw-------. 1 boinc boinc   1516240 Jan  8 18:02 agis_ddmendpoints.agis.ALL.json
[2026-01-08 18:05:29] -rw-------. 1 boinc boinc    554156 Jan  8 18:02 log.47898826._016222.job.log.tgz.1
[2026-01-08 18:05:29] -rw-------. 1 boinc boinc        95 Jan  8 18:04 pilot_heartbeat.json
[2026-01-08 18:05:29] -rw-------. 1 boinc boinc      7779 Jan  8 18:04 heartbeat.json
[2026-01-08 18:05:29] -rw-r--r--. 1 boinc boinc      8192 Jan  8 18:05 boinc_mmap_file
[2026-01-08 18:05:29] -rw-r--r--. 1 boinc boinc        28 Jan  8 18:05 wrapper_checkpoint.txt
[2026-01-08 18:05:29] -rw-------. 1 boinc boinc      4884 Jan  8 18:05 pilotlog.txt
[2026-01-08 18:05:29] -rw-------. 1 boinc boinc   2941993 Jan  8 18:05 log.47898826._016222.job.log.1
[2026-01-08 18:05:29] -rw-------. 1 boinc boinc       357 Jan  8 18:05 output.list
[2026-01-08 18:05:29] -rw-r--r--. 1 boinc boinc       620 Jan  8 18:05 runtime_log
[2026-01-08 18:05:29] -rw-------. 1 boinc boinc   3512320 Jan  8 18:05 result.tar.gz
[2026-01-08 18:05:29] -rw-r--r--. 1 boinc boinc      8817 Jan  8 18:05 runtime_log.err
[2026-01-08 18:05:29] -rw-------. 1 boinc boinc       657 Jan  8 18:05 geIKDmoxpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmn6dKDmcXjsdm.diag
[2026-01-08 18:05:29] -rw-r--r--. 1 boinc boinc     20756 Jan  8 18:05 stderr.txt
[2026-01-08 18:05:29] HITS file was successfully produced:
[2026-01-08 18:05:29] -rw-------. 1 boinc boinc 221215331 Jan  8 18:01 shared/HITS.pool.root.1
[2026-01-08 18:05:29]  *** Contents of shared directory: ***
[2026-01-08 18:05:29] total 441104
[2026-01-08 18:05:29] -rw-r--r--. 2 boinc boinc 226348912 Jan  8 11:51 ATLAS.root_0
[2026-01-08 18:05:29] -rw-r--r--. 2 boinc boinc    592397 Jan  8 11:51 input.tar.gz
[2026-01-08 18:05:29] -rw-r--r--. 2 boinc boinc     15847 Jan  8 11:51 start_atlas.sh
[2026-01-08 18:05:29] -rw-------. 1 boinc boinc 221215331 Jan  8 18:01 HITS.pool.root.1
[2026-01-08 18:05:29] -rw-------. 1 boinc boinc   3512320 Jan  8 18:05 result.tar.gz
18:05:30 (28374): run_atlas exited; CPU time 81963.379698
18:05:30 (28374): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN